Csor.00g046260 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGGCATCACAGATTGCAGTAAGCATGATGGTAATGTTTATGATGATGGAGGTGTGCGTGGCAGTGACATGCAGTCCAGTGCAGCTGAGTTCCTGCGTGAGTGCAATAACATCTTCAGTTCCACCTTCCAAGCTCTGCTGCTCTAAGATTAAGGAACAGAAGCCCTGCCTCTGCAAGTACATGCAGAACCCCACTTTAAAGAAGTTTGTGGACTCTCCCAATGCCAGGAGAGTTGCTAACACTTGTGGAACTCCATTTCCCAAGTGCTAG ATGAAGGCATCACAGATTGCAGTAAGCATGATGGTAATGTTTATGATGATGGAGGTGTGCGTGGCAGTGACATGCAGTCCAGTGCAGCTGAGTTCCTGCGTGAGTGCAATAACATCTTCAGTTCCACCTTCCAAGCTCTGCTGCTCTAAGATTAAGGAACAGAAGCCCTGCCTCTGCAAGTACATGCAGAACCCCACTTTAAAGAAGTTTGTGGACTCTCCCAATGCCAGGAGAGTTGCTAACACTTGTGGAACTCCATTTCCCAAGTGCTAG ATGAAGGCATCACAGATTGCAGTAAGCATGATGGTAATGTTTATGATGATGGAGGTGTGCGTGGCAGTGACATGCAGTCCAGTGCAGCTGAGTTCCTGCGTGAGTGCAATAACATCTTCAGTTCCACCTTCCAAGCTCTGCTGCTCTAAGATTAAGGAACAGAAGCCCTGCCTCTGCAAGTACATGCAGAACCCCACTTTAAAGAAGTTTGTGGACTCTCCCAATGCCAGGAGAGTTGCTAACACTTGTGGAACTCCATTTCCCAAGTGCTAG MKASQIAVSMMVMFMMMEVCVAVTCSPVQLSSCVSAITSSVPPSKLCCSKIKEQKPCLCKYMQNPTLKKFVDSPNARRVANTCGTPFPKC Homology
BLAST of Csor.00g046260 vs. ExPASy Swiss-Prot
Match: P82353 (Non-specific lipid-transfer protein 2 OS=Prunus armeniaca OX=36596 PE=1 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 1.2e-18 Identity = 38/68 (55.88%), Postives = 53/68 (77.94%), Query Frame = 0
BLAST of Csor.00g046260 vs. ExPASy Swiss-Prot
Match: Q43681 (Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata OX=3917 PE=2 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 1.4e-17 Identity = 44/93 (47.31%), Postives = 64/93 (68.82%), Query Frame = 0
BLAST of Csor.00g046260 vs. ExPASy Swiss-Prot
Match: P86809 (Non-specific lipid-transfer protein 2 OS=Apium graveolens var. rapaceum OX=278110 PE=1 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 6.8e-17 Identity = 39/67 (58.21%), Postives = 52/67 (77.61%), Query Frame = 0
BLAST of Csor.00g046260 vs. ExPASy Swiss-Prot
Match: P82901 (Non-specific lipid-transfer protein 2P OS=Triticum aestivum OX=4565 PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.0e-09 Identity = 27/66 (40.91%), Postives = 39/66 (59.09%), Query Frame = 0
BLAST of Csor.00g046260 vs. ExPASy Swiss-Prot
Match: A2XBN5 (Non-specific lipid-transfer protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=LTP-2 PE=3 SV=2) HSP 1 Score: 62.0 bits (149), Expect = 4.0e-09 Identity = 24/67 (35.82%), Postives = 41/67 (61.19%), Query Frame = 0
BLAST of Csor.00g046260 vs. NCBI nr
Match: KAG6572947.1 (hypothetical protein SDJN03_26834, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 179 bits (453), Expect = 1.71e-56 Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0
BLAST of Csor.00g046260 vs. NCBI nr
Match: XP_022923700.1 (non-specific lipid-transfer protein 2-like [Cucurbita moschata] >XP_023519179.1 non-specific lipid-transfer protein 2-like [Cucurbita pepo subsp. pepo] >KAG6584342.1 hypothetical protein SDJN03_20274, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 163 bits (413), Expect = 2.18e-50 Identity = 82/90 (91.11%), Postives = 87/90 (96.67%), Query Frame = 0
BLAST of Csor.00g046260 vs. NCBI nr
Match: XP_004137484.1 (non-specific lipid-transfer protein 2 [Cucumis sativus]) HSP 1 Score: 161 bits (407), Expect = 1.79e-49 Identity = 80/90 (88.89%), Postives = 87/90 (96.67%), Query Frame = 0
BLAST of Csor.00g046260 vs. NCBI nr
Match: XP_023000838.1 (probable non-specific lipid-transfer protein AKCS9 [Cucurbita maxima]) HSP 1 Score: 162 bits (410), Expect = 2.96e-49 Identity = 81/90 (90.00%), Postives = 87/90 (96.67%), Query Frame = 0
BLAST of Csor.00g046260 vs. NCBI nr
Match: KAG7019930.1 (hypothetical protein SDJN02_18897, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 160 bits (404), Expect = 5.14e-49 Identity = 81/90 (90.00%), Postives = 86/90 (95.56%), Query Frame = 0
BLAST of Csor.00g046260 vs. ExPASy TrEMBL
Match: A0A6J1ECM2 (non-specific lipid-transfer protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111431330 PE=4 SV=1) HSP 1 Score: 163 bits (413), Expect = 1.05e-50 Identity = 82/90 (91.11%), Postives = 87/90 (96.67%), Query Frame = 0
BLAST of Csor.00g046260 vs. ExPASy TrEMBL
Match: A0A0A0LVT5 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042560 PE=4 SV=1) HSP 1 Score: 161 bits (407), Expect = 8.67e-50 Identity = 80/90 (88.89%), Postives = 87/90 (96.67%), Query Frame = 0
BLAST of Csor.00g046260 vs. ExPASy TrEMBL
Match: A0A6J1KNT4 (probable non-specific lipid-transfer protein AKCS9 OS=Cucurbita maxima OX=3661 GN=LOC111495166 PE=4 SV=1) HSP 1 Score: 162 bits (410), Expect = 1.44e-49 Identity = 81/90 (90.00%), Postives = 87/90 (96.67%), Query Frame = 0
BLAST of Csor.00g046260 vs. ExPASy TrEMBL
Match: A0A5D3BJV8 (Non-specific lipid-transfer protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G002150 PE=4 SV=1) HSP 1 Score: 157 bits (397), Expect = 2.91e-48 Identity = 77/90 (85.56%), Postives = 87/90 (96.67%), Query Frame = 0
BLAST of Csor.00g046260 vs. ExPASy TrEMBL
Match: V7C3M6 (AAI domain-containing protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_004G154200g PE=4 SV=1) HSP 1 Score: 138 bits (348), Expect = 9.20e-41 Identity = 70/92 (76.09%), Postives = 81/92 (88.04%), Query Frame = 0
BLAST of Csor.00g046260 vs. TAIR 10
Match: AT3G18280.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 103.6 bits (257), Expect = 8.5e-23 Identity = 47/87 (54.02%), Postives = 68/87 (78.16%), Query Frame = 0
BLAST of Csor.00g046260 vs. TAIR 10
Match: AT1G48750.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 103.2 bits (256), Expect = 1.1e-22 Identity = 47/90 (52.22%), Postives = 70/90 (77.78%), Query Frame = 0
BLAST of Csor.00g046260 vs. TAIR 10
Match: AT5G38170.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 82.0 bits (201), Expect = 2.6e-16 Identity = 34/68 (50.00%), Postives = 47/68 (69.12%), Query Frame = 0
BLAST of Csor.00g046260 vs. TAIR 10
Match: AT1G73780.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 80.1 bits (196), Expect = 1.0e-15 Identity = 37/83 (44.58%), Postives = 55/83 (66.27%), Query Frame = 0
BLAST of Csor.00g046260 vs. TAIR 10
Match: AT5G38160.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 79.7 bits (195), Expect = 1.3e-15 Identity = 35/70 (50.00%), Postives = 45/70 (64.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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