Csor.00g026080 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g026080
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptionubiquitin-conjugating enzyme E2 variant 1B-like
LocationCsor_Chr04: 5329273 .. 5332866 (-)
RNA-Seq ExpressionCsor.00g026080
SyntenyCsor.00g026080
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCTCTGAAGGATCCAGGGTGGTTGGTGAGTTCTTCAAAACCCTAATTTTCTTCTCTCCTTTTCCTTTCCTTTCTGGGTTTTTATCTTTTGATTTCGATCTTCGTTTCTTCGATTACTGGATCGTTGTTGGGTTTATTGGGTTTATTGGGATTTTCGGGATTCTGTTTTTTCTAATTTGGAGTTTGGGTTTTGATGGAATTGTTGAATTGTTCATAGTTTAAGTGATGGGTTTGAATCCCTTGGATTCAAATCCATGTTGTTCGTGTGTTTGATTAATAATCATGGAACTTCTTTGAACTATTTGATCAAGCTGTTTAAATTTATTGTTGTCGAAGTCGTGGTTGATCGAATTAGTTTTTATAATGACAGAGAATAGTGTAATTTGAAATTTGGATCCGTGACTGATGAATTTTGAGTTCTGATAGAGCAATGATCTTTTTCCTGTTTCTCACTCCTGGCTGACCTCTGCAAACTAGGACTTCAATATCATAACCTCTTCTGGCTATGACTTGATTACCCCTTGGATTGATTGGCTTGCCTTTGAGAGGTTGTATGGAACTTAGTCCTTCTTGTCAATTCCATTTCCCTCTTCTTTTTGTGGTTTGTGCTACTTAGTCCTAAAGAACATGTATGCTTTGCTATTGTCTATCCTGAGCCGCGAGTGAGGCTGGAGAGCAAAAAAGAACGAATGGATATGTGGGATTCCCGAGAAATTCTTCGATTTCTTCCGGAAGTCGATGGAGTTTGGCGAAGCCCTTTCCTTCCCTTTACTTTAGGGCTTGCTTGCCTTTAAGTAAGGGAATAGTCCAACTTTCGACCCTATTTGGCTTTCAGTACTTTCTATTCTCGGTAACACCATTTATGTCCCTAAATCAATCTGATATTCCGCGAGTTGTCCGACCTGCCTCGATCCTGTTGGACCTTCAATCTCTCAACTGTTGGTTCAATTGGTTCAGTTTTCAACCAGTACTTGGAGTCACTCGGTTTCTCATTCCTTATTTCCTTTCCAGTTTTTGTTTTTGGTTTCAGTTTGGTCAGAAAATCAATTTCAGTTGAAGTGTATGCTCCATTAGAAGTGCTTAGATCGATGAAAGATCAGGGATGTAATGAATCTTGACTATAAGAAATGATGAAACCAACTGAAGTAGTCTATGCCATTTAGCTTTGGTGAAGGATCGTATAAGATTTTATCGAAGGTGCTCGAAATCCCACTTTGGCCACCAAAGGATAGTTGGAAGACCTTAAAAGAGGTCATCTGCTTTCAAGGATGGATACCTAACATCTTTAGATGTCCAACATCTAATCAAGAATTTGGTCGTCCAACGATAACGGACTCTCCAAATATTTCCCTAATGGCTTAATATTGTCTACTTCAGGCATGAATCCTCGTGATTTTGTTTTGGAAATAACCAAAAGCTCTCGTACTAACGGGGATAATTGTCCTTATTTATATATCATGGATCTCTCTTTTCCTTAACTAGTGTGAAACTTTGTTTGCACCTAACAATCCTCTCCTCTAACAAAGTACCACCTTGAGCCTCCCTTCATCTGTTCACCCCCGATTGCCTGTGAGAGTTTGCTCTTATCAAGCCCCAAAGCAAAGCCAAATTGAACACAACCATGGATACTCATTGTGGGATATACTTGGTGTCAACCACCATCACGCCCTTAATCTCCTCCCCTCGAACAAAGATAGAGTCTACCTATTAGTCTACCCGTCCTGATAGGACTACTCTCCATCCAAAGCCATTTGATTCGATAGAGCTCTTGTCACATCTCAAGCACTATTTGTCCAATCTAGGGACTCATCTCACAAGGCTCACTAATTTTGTTCGGAATTCGAGGATCTCACAAACACAACTAAGTTTTAAAACCATGGCTTTGATACCCTTGAGAAATGTAAGAATTCCTACCGTTAGCCTGTTTACTTAAAATTCCTTCAACATGCCTTCAAAACTCAGTAAAATAACCAACTATGACATGCCCAAGTAACAAAGAAGCCAGTAGCCAAGCATAGCCCTCCAGGACTGTCAATTTGCATCCTTGAGGTCTTGATTTGATTTAACTAGTATGTCCTTATTAGATCTTGGTTCTTAATTCTCTACAATGAAAAATGACACACCATATTTGAGTCATGTCTTGCCTTTATTTTTTCATATACCTTATTAAACGTGGTTGGTTTTATCAGTTTTATGATACAGTTGTATTTCTTGTGTGTATGTGCTTGTATAATCTATATGCTGTTCTCAAAAACTTTTTATCCTGTCTCTCTCTACGGTCCAGCTCGAATCGGATTCTGGGTGTTATCTGTCTTGAAACCCATAGACCCAGTTACTCGTGTTACAACTTTGAAGCACAATAGCTTTAGCTTGCTAATTATATCTCTTTGCTTGACCTATGCCGTCTGTTTGTTTGCAGTTCCTAGGAATTTTAGATTATTGGAAGAGCTCGAGCGAGGTGAAAAGGGGATTGGGGATGGAACTGTCAGCTATGGCATGGATGATCCAGATGATTTGCTCATGCAATCTTGGACTGGTACCATTATAGGTCCACCTAATGTGAGTTTCAACTTTTCTGCTTACAGGTTGGATCTTTTTCTTGTTTGCATGAATTTGAGGTATTCTCTCAGAAAATGGATTATATTTACTCCTAAGTTGCATTTGCTATAAACATTTTGTCACGATTTTGAAAACGAGTAAGCAAAGAAGATGCCAAGATTTTGAAAACGAGTTGCATTCTCTCAGAAAATGCGAAGATTTTAATTATCCTCACATCGGTTTGAGAGGGGAACGAAACATTCCTTATAAGAGTGTGGAAACCTCTCCCTAGTCGACGCATTTTAGAATCGTGAGGTTGACAACGATACGTAATGGGCCAAAGCAGACGATATCTGCTAGCGGTAGGCTTGGGTTATTACGCTCTCTTTCCCTCGCGTCTGTCTCTCTCAATACGTAACATGACTGTTTCTGTTGTTTTTCCTTACATATATTCTCAAATGCCTACAGTTCGCCCTTAGCTCGTCTCACTTAAAATTTGATGGTCTGATGTGTTGTTTTAGACTGTTCATGAAGGGCGAATCTACCAATTGAAGCTATTTTGTGGAAAGGATTATCCAGATAATCCACCAGCCGTCAGATTCCAAAGTAGGATAAACATGACATGTGTCAATCCCGAAACTGGAATGGTACGAACCATTTCTTAAAGCCATTTGTAACCATTTTATAACTGGAAATAATGTATGCTTGCTAAAATTACCAGGTTGAAAGGAACCTCCTTCCCATGCTTGCAAAATGGCAAAGGGAATACACAATGGAGGATATATTAACTCAATTGAAGAAAGAAATGATGTCCTCACAAAATAGGAAGCTGGCTCAGCCTCCTGAAGGTGCTTATATATCACCACTTAGATCATCTTTTCTTGCTTTTCTGCTAAAATGTTCTGCTGCTGTCATTTAAGAACGGTTTTACTATTTCGAAACACTACTTCTTACCTTGTTCGTAGACAAAGCTAATTCGAAACGACGTTCTCAGGGAACGAAGAGGGAAGAACAGAACAAAAGGGGCTAGTCCTGAAATGTTGCATTCTTTGA

mRNA sequence

ATGGGCTCTGAAGGATCCAGGGTGGTTGTTCCTAGGAATTTTAGATTATTGGAAGAGCTCGAGCGAGGTGAAAAGGGGATTGGGGATGGAACTGTCAGCTATGGCATGGATGATCCAGATGATTTGCTCATGCAATCTTGGACTGGTACCATTATAGGTCCACCTAATACTGTTCATGAAGGGCGAATCTACCAATTGAAGCTATTTTGTGGAAAGGATTATCCAGATAATCCACCAGCCGTCAGATTCCAAAGTAGGATAAACATGACATGTGTCAATCCCGAAACTGGAATGGTTGAAAGGAACCTCCTTCCCATGCTTGCAAAATGGCAAAGGGAATACACAATGGAGGATATATTAACTCAATTGAAGAAAGAAATGATGTCCTCACAAAATAGGAAGCTGGCTCAGCCTCCTGAAGGGAACGAAGAGGGAAGAACAGAACAAAAGGGGCTAGTCCTGAAATGTTGCATTCTTTGA

Coding sequence (CDS)

ATGGGCTCTGAAGGATCCAGGGTGGTTGTTCCTAGGAATTTTAGATTATTGGAAGAGCTCGAGCGAGGTGAAAAGGGGATTGGGGATGGAACTGTCAGCTATGGCATGGATGATCCAGATGATTTGCTCATGCAATCTTGGACTGGTACCATTATAGGTCCACCTAATACTGTTCATGAAGGGCGAATCTACCAATTGAAGCTATTTTGTGGAAAGGATTATCCAGATAATCCACCAGCCGTCAGATTCCAAAGTAGGATAAACATGACATGTGTCAATCCCGAAACTGGAATGGTTGAAAGGAACCTCCTTCCCATGCTTGCAAAATGGCAAAGGGAATACACAATGGAGGATATATTAACTCAATTGAAGAAAGAAATGATGTCCTCACAAAATAGGAAGCTGGCTCAGCCTCCTGAAGGGAACGAAGAGGGAAGAACAGAACAAAAGGGGCTAGTCCTGAAATGTTGCATTCTTTGA

Protein sequence

MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL
Homology
[Close]
BLAST of Csor.00g026080 vs. ExPASy Swiss-Prot
Match: Q9CAB6 (Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana OX=3702 GN=UEV1B PE=1 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 6.9e-73
Identity = 125/159 (78.62%), Postives = 144/159 (90.57%), Query Frame = 0 

Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSE  +VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+LMQSWTGTI+GP NT +E
Sbjct: 1   MGSEEEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           G+I+QLKLFCGKDYP++PP VRFQSRINM CVNPE G+V+ +  PML+ W+RE+TMED+L
Sbjct: 61  GKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 160
            QLKKEMMSSQNRKLAQP EGNEEGRT+ KGLV+KCC++
Sbjct: 121 IQLKKEMMSSQNRKLAQPLEGNEEGRTDPKGLVVKCCVM 159

[Close]
BLAST of Csor.00g026080 vs. ExPASy Swiss-Prot
Match: Q93YP0 (Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana OX=3702 GN=UEV1A PE=1 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 4.2e-70
Identity = 121/159 (76.10%), Postives = 140/159 (88.05%), Query Frame = 0 

Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           M SE ++VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ MQSWTGTI+GPPNT +E
Sbjct: 1   MSSEEAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           G+I+QLKLFCGK+YP++PP VRFQ+RINM CVNPETG+VE +L PML  W+REYTMEDIL
Sbjct: 61  GKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDIL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 160
            +LKKEMM+S NRKLAQPPEGNEE R + KG   KCC++
Sbjct: 121 VKLKKEMMTSHNRKLAQPPEGNEEARADPKG-PAKCCVM 158

[Close]
BLAST of Csor.00g026080 vs. ExPASy Swiss-Prot
Match: Q9SVD7 (Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana OX=3702 GN=UEV1D PE=1 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.6e-61
Identity = 111/141 (78.72%), Postives = 120/141 (85.11%), Query Frame = 0 

Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           +GS GS VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ M+SWTGTIIGP NTVHE
Sbjct: 3   LGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHE 62

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           GRIYQLKLFC KDYP+ PP VRF SR+NM CVN ETG+V+     +LA WQREYTMEDIL
Sbjct: 63  GRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMEDIL 122

Query: 121 TQLKKEMMSSQNRKLAQPPEG 142
            QLKKEM +S NRKL QPPEG
Sbjct: 123 VQLKKEMSTSHNRKLVQPPEG 143

[Close]
BLAST of Csor.00g026080 vs. ExPASy Swiss-Prot
Match: Q9SJ44 (Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana OX=3702 GN=UEV1C PE=1 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 7.9e-61
Identity = 110/137 (80.29%), Postives = 119/137 (86.86%), Query Frame = 0 

Query: 5   GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIY 64
           GS VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ M+SWTGTIIGP NTVHEGRIY
Sbjct: 6   GSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIY 65

Query: 65  QLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDILTQLK 124
           QLKLFC KDYP+ PP VRF SRINMTCVN +TG+V+     +LA WQR+YTMEDILTQLK
Sbjct: 66  QLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDILTQLK 125

Query: 125 KEMMSSQNRKLAQPPEG 142
           KEM +S NRKL QPPEG
Sbjct: 126 KEMAASHNRKLVQPPEG 142

[Close]
BLAST of Csor.00g026080 vs. ExPASy Swiss-Prot
Match: Q5F3Z3 (Ubiquitin-conjugating enzyme E2 variant 2 OS=Gallus gallus OX=9031 GN=UBE2V2 PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 3.3e-43
Identity = 78/137 (56.93%), Postives = 103/137 (75.18%), Query Frame = 0 

Query: 5   GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIY 64
           GS V VPRNFRLLEELE G+KG+GDGTVS+G++D +D+ +  WTG IIGPP T +E RIY
Sbjct: 3   GSTVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIY 62

Query: 65  QLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDILTQLK 124
            LK+ CG  YP+ PP VRF ++INM  +N   GMV+   +P+LAKWQ  Y+++ +L +L+
Sbjct: 63  SLKVECGPKYPEAPPTVRFVTKINMNGINNSNGMVDARSIPVLAKWQNSYSIKVVLQELR 122

Query: 125 KEMMSSQNRKLAQPPEG 142
           + MMS +N KL QPPEG
Sbjct: 123 RLMMSKENMKLPQPPEG 139

[Close]
BLAST of Csor.00g026080 vs. NCBI nr
Match: XP_022942022.1 (ubiquitin-conjugating enzyme E2 variant 1B-like [Cucurbita moschata] >XP_023516869.1 ubiquitin-conjugating enzyme E2 variant 1B-like [Cucurbita pepo subsp. pepo] >KAG6600841.1 Ubiquitin-conjugating enzyme E2 variant 1B, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031476.1 Ubiquitin-conjugating enzyme E2 variant 1B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 330 bits (847), Expect = 2.27e-114
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0 

Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE
Sbjct: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL
Sbjct: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 159
           TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL
Sbjct: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 159

[Close]
BLAST of Csor.00g026080 vs. NCBI nr
Match: XP_022990687.1 (ubiquitin-conjugating enzyme E2 variant 1B-like [Cucurbita maxima])

HSP 1 Score: 329 bits (843), Expect = 9.27e-114
Identity = 158/159 (99.37%), Postives = 158/159 (99.37%), Query Frame = 0 

Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE
Sbjct: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL
Sbjct: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 159
           TQLKKEMMSSQNRKL QPPEGNEEGRTEQKGLVLKCCIL
Sbjct: 121 TQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL 159

[Close]
BLAST of Csor.00g026080 vs. NCBI nr
Match: XP_008464712.1 (PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B-like [Cucumis melo] >XP_008464713.1 PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B-like [Cucumis melo] >XP_038893127.1 ubiquitin-conjugating enzyme E2 variant 1B-like [Benincasa hispida])

HSP 1 Score: 326 bits (835), Expect = 1.54e-112
Identity = 156/159 (98.11%), Postives = 158/159 (99.37%), Query Frame = 0 

Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE
Sbjct: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETG+VE+NLLPMLAKWQREYTMEDIL
Sbjct: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNLLPMLAKWQREYTMEDIL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 159
           TQLKKEMMSS NRKLAQPPEGNEEGRTEQKGLVLKCCIL
Sbjct: 121 TQLKKEMMSSHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 159

[Close]
BLAST of Csor.00g026080 vs. NCBI nr
Match: XP_022157781.1 (ubiquitin-conjugating enzyme E2 variant 1B [Momordica charantia])

HSP 1 Score: 325 bits (834), Expect = 2.19e-112
Identity = 156/159 (98.11%), Postives = 157/159 (98.74%), Query Frame = 0 

Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE
Sbjct: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETG+VERNLLPMLAKWQREYTMEDIL
Sbjct: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGLVERNLLPMLAKWQREYTMEDIL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 159
           TQLKKEM SSQNRKL QPPEGNEEGRTEQKGLVLKCCIL
Sbjct: 121 TQLKKEMTSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL 159

[Close]
BLAST of Csor.00g026080 vs. NCBI nr
Match: XP_011655947.1 (ubiquitin-conjugating enzyme E2 variant 1B [Cucumis sativus] >XP_011655949.1 ubiquitin-conjugating enzyme E2 variant 1B [Cucumis sativus] >XP_031741646.1 ubiquitin-conjugating enzyme E2 variant 1B [Cucumis sativus])

HSP 1 Score: 323 bits (829), Expect = 1.27e-111
Identity = 154/159 (96.86%), Postives = 157/159 (98.74%), Query Frame = 0 

Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDD LMQSWTGTIIGPPNTVHE
Sbjct: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDFLMQSWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETG+VE+N+LPMLAKWQREYTMEDIL
Sbjct: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNILPMLAKWQREYTMEDIL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 159
           TQLKKEMMSS NRKLAQPPEGNEEGRTEQKGLVLKCCIL
Sbjct: 121 TQLKKEMMSSHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 159

[Close]
BLAST of Csor.00g026080 vs. ExPASy TrEMBL
Match: A0A6J1FP33 (ubiquitin-conjugating enzyme E2 variant 1B-like OS=Cucurbita moschata OX=3662 GN=LOC111447210 PE=4 SV=1)

HSP 1 Score: 330 bits (847), Expect = 1.10e-114
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0 

Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE
Sbjct: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL
Sbjct: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 159
           TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL
Sbjct: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 159

[Close]
BLAST of Csor.00g026080 vs. ExPASy TrEMBL
Match: A0A6J1JJH8 (ubiquitin-conjugating enzyme E2 variant 1B-like OS=Cucurbita maxima OX=3661 GN=LOC111487499 PE=4 SV=1)

HSP 1 Score: 329 bits (843), Expect = 4.49e-114
Identity = 158/159 (99.37%), Postives = 158/159 (99.37%), Query Frame = 0 

Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE
Sbjct: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL
Sbjct: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 159
           TQLKKEMMSSQNRKL QPPEGNEEGRTEQKGLVLKCCIL
Sbjct: 121 TQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL 159

[Close]
BLAST of Csor.00g026080 vs. ExPASy TrEMBL
Match: A0A1S3CM86 (ubiquitin-conjugating enzyme E2 variant 1B-like OS=Cucumis melo OX=3656 GN=LOC103502532 PE=4 SV=1)

HSP 1 Score: 326 bits (835), Expect = 7.45e-113
Identity = 156/159 (98.11%), Postives = 158/159 (99.37%), Query Frame = 0 

Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE
Sbjct: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETG+VE+NLLPMLAKWQREYTMEDIL
Sbjct: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGVVEKNLLPMLAKWQREYTMEDIL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 159
           TQLKKEMMSS NRKLAQPPEGNEEGRTEQKGLVLKCCIL
Sbjct: 121 TQLKKEMMSSHNRKLAQPPEGNEEGRTEQKGLVLKCCIL 159

[Close]
BLAST of Csor.00g026080 vs. ExPASy TrEMBL
Match: A0A6J1DZ79 (ubiquitin-conjugating enzyme E2 variant 1B OS=Momordica charantia OX=3673 GN=LOC111024402 PE=4 SV=1)

HSP 1 Score: 325 bits (834), Expect = 1.06e-112
Identity = 156/159 (98.11%), Postives = 157/159 (98.74%), Query Frame = 0 

Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE
Sbjct: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETG+VERNLLPMLAKWQREYTMEDIL
Sbjct: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGLVERNLLPMLAKWQREYTMEDIL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 159
           TQLKKEM SSQNRKL QPPEGNEEGRTEQKGLVLKCCIL
Sbjct: 121 TQLKKEMTSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL 159

[Close]
BLAST of Csor.00g026080 vs. ExPASy TrEMBL
Match: A0A6J1JTK4 (ubiquitin-conjugating enzyme E2 variant 1B-like OS=Cucurbita maxima OX=3661 GN=LOC111487383 PE=4 SV=1)

HSP 1 Score: 322 bits (824), Expect = 3.55e-111
Identity = 155/159 (97.48%), Postives = 156/159 (98.11%), Query Frame = 0 

Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE
Sbjct: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           GRIYQLKLFCGKDYPDNPPAVRFQSRINM+CVNPETGMVERNLLPMLAKWQREYTMEDIL
Sbjct: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMSCVNPETGMVERNLLPMLAKWQREYTMEDIL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 159
           TQLKKEMMSS NRKL QP EGNEEGRTEQKGLVLKCCIL
Sbjct: 121 TQLKKEMMSSHNRKLVQPLEGNEEGRTEQKGLVLKCCIL 159

[Close]
BLAST of Csor.00g026080 vs. TAIR 10
Match: AT1G70660.1 (MMS ZWEI homologue 2 )

HSP 1 Score: 274.6 bits (701), Expect = 4.9e-74
Identity = 125/159 (78.62%), Postives = 144/159 (90.57%), Query Frame = 0 

Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSE  +VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+LMQSWTGTI+GP NT +E
Sbjct: 1   MGSEEEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           G+I+QLKLFCGKDYP++PP VRFQSRINM CVNPE G+V+ +  PML+ W+RE+TMED+L
Sbjct: 61  GKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 160
            QLKKEMMSSQNRKLAQP EGNEEGRT+ KGLV+KCC++
Sbjct: 121 IQLKKEMMSSQNRKLAQPLEGNEEGRTDPKGLVVKCCVM 159

[Close]
BLAST of Csor.00g026080 vs. TAIR 10
Match: AT1G23260.1 (MMS ZWEI homologue 1 )

HSP 1 Score: 265.4 bits (677), Expect = 3.0e-71
Identity = 121/159 (76.10%), Postives = 140/159 (88.05%), Query Frame = 0 

Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           M SE ++VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ MQSWTGTI+GPPNT +E
Sbjct: 1   MSSEEAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           G+I+QLKLFCGK+YP++PP VRFQ+RINM CVNPETG+VE +L PML  W+REYTMEDIL
Sbjct: 61  GKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDIL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 160
            +LKKEMM+S NRKLAQPPEGNEE R + KG   KCC++
Sbjct: 121 VKLKKEMMTSHNRKLAQPPEGNEEARADPKG-PAKCCVM 158

[Close]
BLAST of Csor.00g026080 vs. TAIR 10
Match: AT1G70650.2 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 265.0 bits (676), Expect = 3.9e-71
Identity = 119/154 (77.27%), Postives = 140/154 (90.91%), Query Frame = 0 

Query: 6   SRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQ 65
           + ++VPRNFRLLEELERGEKGIGDGTVSYGMDD DD+LMQSWTGTI+GP NT +EG+I+Q
Sbjct: 442 NELLVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYEGKIFQ 501

Query: 66  LKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDILTQLKK 125
           LKLFCGKDYP++PP VRFQSRINM CVNPE G+V+ +  PML+ W+RE+TMED+L QLKK
Sbjct: 502 LKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLLIQLKK 561

Query: 126 EMMSSQNRKLAQPPEGNEEGRTEQKGLVLKCCIL 160
           EMMSSQNRKLAQP EGNEEGRT+ KGLV+KCC++
Sbjct: 562 EMMSSQNRKLAQPLEGNEEGRTDPKGLVVKCCVM 595

[Close]
BLAST of Csor.00g026080 vs. TAIR 10
Match: AT1G70660.2 (MMS ZWEI homologue 2 )

HSP 1 Score: 248.8 bits (634), Expect = 2.9e-66
Identity = 115/144 (79.86%), Postives = 130/144 (90.28%), Query Frame = 0 

Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           MGSE  +VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+LMQSWTGTI+GP NT +E
Sbjct: 1   MGSEEEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYE 60

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           G+I+QLKLFCGKDYP++PP VRFQSRINM CVNPE G+V+ +  PML+ W+RE+TMED+L
Sbjct: 61  GKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLL 120

Query: 121 TQLKKEMMSSQNRKLAQPPEGNEE 145
            QLKKEMMSSQNRKLAQP EGNEE
Sbjct: 121 IQLKKEMMSSQNRKLAQPLEGNEE 144

[Close]
BLAST of Csor.00g026080 vs. TAIR 10
Match: AT3G52560.1 (ubiquitin E2 variant 1D-4 )

HSP 1 Score: 236.9 bits (603), Expect = 1.1e-62
Identity = 111/141 (78.72%), Postives = 120/141 (85.11%), Query Frame = 0 

Query: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHE 60
           +GS GS VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ M+SWTGTIIGP NTVHE
Sbjct: 3   LGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHE 62

Query: 61  GRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKWQREYTMEDIL 120
           GRIYQLKLFC KDYP+ PP VRF SR+NM CVN ETG+V+     +LA WQREYTMEDIL
Sbjct: 63  GRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMEDIL 122

Query: 121 TQLKKEMMSSQNRKLAQPPEG 142
            QLKKEM +S NRKL QPPEG
Sbjct: 123 VQLKKEMSTSHNRKLVQPPEG 143

The following BLAST results are available for this feature:
BLAST of Csor.00g026080 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9CAB66.9e-7378.62Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana OX=3702 GN=UE... [more]
Q93YP04.2e-7076.10Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana OX=3702 GN=UE... [more]
Q9SVD71.6e-6178.72Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana OX=3702 GN=UE... [more]
Q9SJ447.9e-6180.29Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana OX=3702 GN=UE... [more]
Q5F3Z33.3e-4356.93Ubiquitin-conjugating enzyme E2 variant 2 OS=Gallus gallus OX=9031 GN=UBE2V2 PE=... [more]
BLAST of Csor.00g026080 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022942022.12.27e-114100.00ubiquitin-conjugating enzyme E2 variant 1B-like [Cucurbita moschata] >XP_0235168... [more]
XP_022990687.19.27e-11499.37ubiquitin-conjugating enzyme E2 variant 1B-like [Cucurbita maxima][more]
XP_008464712.11.54e-11298.11PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B-like [Cucumis melo] >XP_00... [more]
XP_022157781.12.19e-11298.11ubiquitin-conjugating enzyme E2 variant 1B [Momordica charantia][more]
XP_011655947.11.27e-11196.86ubiquitin-conjugating enzyme E2 variant 1B [Cucumis sativus] >XP_011655949.1 ubi... [more]
BLAST of Csor.00g026080 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FP331.10e-114100.00ubiquitin-conjugating enzyme E2 variant 1B-like OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1JJH84.49e-11499.37ubiquitin-conjugating enzyme E2 variant 1B-like OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A1S3CM867.45e-11398.11ubiquitin-conjugating enzyme E2 variant 1B-like OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A6J1DZ791.06e-11298.11ubiquitin-conjugating enzyme E2 variant 1B OS=Momordica charantia OX=3673 GN=LOC... [more]
A0A6J1JTK43.55e-11197.48ubiquitin-conjugating enzyme E2 variant 1B-like OS=Cucurbita maxima OX=3661 GN=L... [more]
BLAST of Csor.00g026080 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G70660.14.9e-7478.62MMS ZWEI homologue 2 [more]
AT1G23260.13.0e-7176.10MMS ZWEI homologue 1 [more]
AT1G70650.23.9e-7177.27Ran BP2/NZF zinc finger-like superfamily protein [more]
AT1G70660.22.9e-6679.86MMS ZWEI homologue 2 [more]
AT3G52560.11.1e-6278.72ubiquitin E2 variant 1D-4 [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 14..158
e-value: 5.4E-22
score: 89.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 129..148
NoneNo IPR availablePANTHERPTHR24068:SF344UBIQUITIN-CONJUGATING ENZYME E2 VARIANT 1A-LIKEcoord: 8..144
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 8..144
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 42..133
e-value: 1.1E-15
score: 57.5
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 11..159
score: 34.245319
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 2..144
e-value: 9.4E-43
score: 147.3
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 9..142

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g026080.m01Csor.00g026080.m01mRNA