Csor.00g021150 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g021150
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	E3 ubiquitin-protein ligase RNF126-like isoform X3
Location	Csor_Chr04: 2665931 .. 2666587 (+)
RNA-Seq Expression	Csor.00g021150
Synteny	Csor.00g021150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCAACACGAATTCTCGCCGGATGATCCCGCGGTGGACGTTCGAAACTGACGATCCTCATTCTCTGGATTCTTGGATTACTCTCCAATTCTCCGGACCATCGGAAAACTCCAATCCCCAGGCGAATTCCGACACGGAGGCGATTCGGAGGGTGAAAATTACGGAGTCGCATCTGCAGAAGGATTCGAGCTGTGCGATTTGTAAAGAGGAATTCGAAATCGGAGGGGAAGTGAGGGAGTTGCCGTGTAGACATTTTTACCATTCGGATTGCATTGTTCCTTGGTTGAGAATCCATAGTACTTGCCCTATTTGCCGGTACACACTACAGAACGCCATTGATGGTGAGAGCTCTGAGGAATCTGTGGAAGAAGGAGAGGGAAGAGGGAATGGCTGGTGGAATGTGGTGCGTTCATGGTGGCCGTTCCGTGTGATCGGCGATTTGGCTCGCCGGCTAGGGTTCGCCGATTATGGCGATAATCTCCTCGCCTTGGAACGTAAGATTTTAATTTTTTTTTTTTTTATTGCAATTATGATCTCATAACTAACGAACAGATCAGGAAAAAAAAAATTAAAATTCCAAATTTACACCAATAAATATAAAAATTAGCCAAATATTGCAGCAGATTCGTGGATGTACTCTTGGCTGGCTAATTGA

mRNA sequence

ATGACCAACACGAATTCTCGCCGGATGATCCCGCGGTGGACGTTCGAAACTGACGATCCTCATTCTCTGGATTCTTGGATTACTCTCCAATTCTCCGGACCATCGGAAAACTCCAATCCCCAGGCGAATTCCGACACGGAGGCGATTCGGAGGGTGAAAATTACGGAGTCGCATCTGCAGAAGGATTCGAGCTGTGCGATTTGTAAAGAGGAATTCGAAATCGGAGGGGAAGTGAGGGAGTTGCCGTGTAGACATTTTTACCATTCGGATTGCATTGTTCCTTGGTTGAGAATCCATAGTACTTGCCCTATTTGCCGGTACACACTACAGAACGCCATTGATGGTGAGAGCTCTGAGGAATCTGTGGAAGAAGGAGAGGGAAGAGGGAATGGCTGGTGGAATGTGGTGCGTTCATGGTGGCCGTTCCGTGTGATCGGCGATTTGGCTCGCCGGCTAGGGTTCGCCGATTATGGCGATAATCTCCTCGCCTTGGAACATTCGTGGATGTACTCTTGGCTGGCTAATTGA

Coding sequence (CDS)

ATGACCAACACGAATTCTCGCCGGATGATCCCGCGGTGGACGTTCGAAACTGACGATCCTCATTCTCTGGATTCTTGGATTACTCTCCAATTCTCCGGACCATCGGAAAACTCCAATCCCCAGGCGAATTCCGACACGGAGGCGATTCGGAGGGTGAAAATTACGGAGTCGCATCTGCAGAAGGATTCGAGCTGTGCGATTTGTAAAGAGGAATTCGAAATCGGAGGGGAAGTGAGGGAGTTGCCGTGTAGACATTTTTACCATTCGGATTGCATTGTTCCTTGGTTGAGAATCCATAGTACTTGCCCTATTTGCCGGTACACACTACAGAACGCCATTGATGGTGAGAGCTCTGAGGAATCTGTGGAAGAAGGAGAGGGAAGAGGGAATGGCTGGTGGAATGTGGTGCGTTCATGGTGGCCGTTCCGTGTGATCGGCGATTTGGCTCGCCGGCTAGGGTTCGCCGATTATGGCGATAATCTCCTCGCCTTGGAACATTCGTGGATGTACTCTTGGCTGGCTAATTGA

Protein sequence

MTNTNSRRMIPRWTFETDDPHSLDSWITLQFSGPSENSNPQANSDTEAIRRVKITESHLQKDSSCAICKEEFEIGGEVRELPCRHFYHSDCIVPWLRIHSTCPICRYTLQNAIDGESSEESVEEGEGRGNGWWNVVRSWWPFRVIGDLARRLGFADYGDNLLALEHSWMYSWLAN

Homology

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BLAST of Csor.00g021150 vs. ExPASy Swiss-Prot
Match: O22197 (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 8.8e-21
Identity = 49/122 (40.16%), Postives = 67/122 (54.92%), Query Frame = 0


Query: 40  PQANSDTEAIRRVKITESHLQ-KDSSCAICKEEFEIGGEVRELPCRHFYHSDCIVPWLRI 99
           P   S  +A+  +KI + HL+  DS+C +CK+EFE+G E +++PC H YHSDCIVPWL  
Sbjct: 164 PAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQ 223

Query: 100 HSTCPICRYTLQNAIDGESSE--------------ESVEEGEGRGNGWWNVVRSWWPFRV 147
           H++CP+CR  L +A    SS+               S       GN   N   S+WPFR 
Sbjct: 224 HNSCPVCRQELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWPFRS 283

[Close]

BLAST of Csor.00g021150 vs. ExPASy Swiss-Prot
Match: Q94AK4 (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 4.4e-20
Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 0


Query: 40  PQANSDTEAIRRVKITESHLQ-KDSSCAICKEEFEIGGEVRELPCRHFYHSDCIVPWLRI 99
           P   S  +A+  +KIT+ HL+  DS C +CK+EFE+  E +++PC H YHSDCIVPWL  
Sbjct: 160 PAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQ 219

Query: 100 HSTCPICRYTLQNAIDGESSEESVEEG-EGRGNG-WWNVVRSWWPFR 144
           H++CP+CR  L +     S++ S      GR N    N+  + WPFR
Sbjct: 220 HNSCPVCRKELPSRGSSSSTQSSQNRSTNGRENSRRRNIFSNLWPFR 266

[Close]

BLAST of Csor.00g021150 vs. ExPASy Swiss-Prot
Match: Q9SNB6 (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 4.1e-18
Identity = 42/97 (43.30%), Postives = 64/97 (65.98%), Query Frame = 0


Query: 25  SWITLQFSGPSENSNPQAN-SDTEAIRRVKITESHLQKDSSCAICKEEFEIGGEVRELPC 84
           S I    +G   + NP A+ S  E++ RV+I++ H + +++CA+C E FE G E RE+PC
Sbjct: 174 SQIEASGNGIGRSGNPPASKSAIESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPC 233

Query: 85  RHFYHSDCIVPWLRIHSTCPICRYTLQNAIDGESSEE 121
           +H +H DCIVPWL I ++CP+CR+ L +     S+EE
Sbjct: 234 KHIFHGDCIVPWLSIRNSCPVCRFELPSDPIQRSNEE 270

[Close]

BLAST of Csor.00g021150 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 7.0e-18
Identity = 40/114 (35.09%), Postives = 69/114 (60.53%), Query Frame = 0


Query: 40  PQANSDTEAIRRVKITESHLQKD-SSCAICKEEFEIGGEVRELPCRHFYHSDCIVPWLRI 99
           P + S  +A+  VK+T+  L+ + + CA+C +EFE G +V+++PC+H +H DC++PWL +
Sbjct: 190 PASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLEL 249

Query: 100 HSTCPICRYTLQNAIDGESSEESVEEGEGRGNGWWNV---------VRSWWPFR 144
           H++CP+CR+ L    D    E   +  +G G+G  +V         ++  WPFR
Sbjct: 250 HNSCPVCRFELPT--DDPDYENRSQGSQGSGDGQGSVEGQQTPRFSIQLPWPFR 301

[Close]

BLAST of Csor.00g021150 vs. ExPASy Swiss-Prot
Match: Q940T5 (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 9.1e-18
Identity = 40/104 (38.46%), Postives = 64/104 (61.54%), Query Frame = 0


Query: 25  SWITLQFSGPSENSNPQAN-SDTEAIRRVKITESHLQKDSSCAICKEEFEIGGEVRELPC 84
           S I    +G   + NP A+ S  E++ RV+I++ H+  +++CA+C E FE   E RE+PC
Sbjct: 158 SQIEASATGIGRSGNPPASKSAIESLPRVEISDCHIGSEANCAVCTEIFETETEAREMPC 217

Query: 85  RHFYHSDCIVPWLRIHSTCPICRYTLQNAIDGESSEESVEEGEG 128
           +H +H DCIVPWL I ++CP+CR+ L +  +  S+    +   G
Sbjct: 218 KHLFHDDCIVPWLSIRNSCPVCRFELPSEPNRRSNNNEEDNAVG 261

[Close]

BLAST of Csor.00g021150 vs. NCBI nr
Match: KAG6600352.1 (putative E3 ubiquitin-protein ligase RHC1A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 383 bits (983), Expect = 1.39e-134
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MTNTNSRRMIPRWTFETDDPHSLDSWITLQFSGPSENSNPQANSDTEAIRRVKITESHLQ 60
           MTNTNSRRMIPRWTFETDDPHSLDSWITLQFSGPSENSNPQANSDTEAIRRVKITESHLQ
Sbjct: 1   MTNTNSRRMIPRWTFETDDPHSLDSWITLQFSGPSENSNPQANSDTEAIRRVKITESHLQ 60

Query: 61  KDSSCAICKEEFEIGGEVRELPCRHFYHSDCIVPWLRIHSTCPICRYTLQNAIDGESSEE 120
           KDSSCAICKEEFEIGGEVRELPCRHFYHSDCIVPWLRIHSTCPICRYTLQNAIDGESSEE
Sbjct: 61  KDSSCAICKEEFEIGGEVRELPCRHFYHSDCIVPWLRIHSTCPICRYTLQNAIDGESSEE 120

Query: 121 SVEEGEGRGNGWWNVVRSWWPFRVIGDLARRLGFADYGDNLLALEHSWMYSWLAN 175
           SVEEGEGRGNGWWNVVRSWWPFRVIGDLARRLGFADYGDNLLALEHSWMYSWLAN
Sbjct: 121 SVEEGEGRGNGWWNVVRSWWPFRVIGDLARRLGFADYGDNLLALEHSWMYSWLAN 175

[Close]

BLAST of Csor.00g021150 vs. NCBI nr
Match: XP_022942768.1 (E3 ubiquitin-protein ligase RNF126-like isoform X3 [Cucurbita moschata] >XP_022942769.1 E3 ubiquitin-protein ligase RNF126-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 373 bits (957), Expect = 2.11e-129
Identity = 170/175 (97.14%), Postives = 172/175 (98.29%), Query Frame = 0


Query: 1   MTNTNSRRMIPRWTFETDDPHSLDSWITLQFSGPSENSNPQANSDTEAIRRVKITESHLQ 60
           MTNTNSRRMIPRWTFETDDPHSLDSWITLQFS PSENSNP ANSD EAIRRVKITESHLQ
Sbjct: 80  MTNTNSRRMIPRWTFETDDPHSLDSWITLQFSRPSENSNPAANSDMEAIRRVKITESHLQ 139

Query: 61  KDSSCAICKEEFEIGGEVRELPCRHFYHSDCIVPWLRIHSTCPICRYTLQNAIDGESSEE 120
           KDSSCAICKEEFEIGGEVRELPCRHFYHSDCIVPWLRIH+TCPICRYTLQNAIDGESSEE
Sbjct: 140 KDSSCAICKEEFEIGGEVRELPCRHFYHSDCIVPWLRIHNTCPICRYTLQNAIDGESSEE 199

Query: 121 SVEEGEGRGNGWWNVVRSWWPFRVIGDLARRLGFADYGDNLLALEHSWMYSWLAN 175
           SVEEG+GRGNGWWNVVRSWWPFRVIGDLARRLGFADYGDNLLALEHSWMYSWLAN
Sbjct: 200 SVEEGDGRGNGWWNVVRSWWPFRVIGDLARRLGFADYGDNLLALEHSWMYSWLAN 254

[Close]

BLAST of Csor.00g021150 vs. NCBI nr
Match: XP_022942766.1 (uncharacterized protein LOC111447704 isoform X2 [Cucurbita moschata] >XP_022942767.1 uncharacterized protein LOC111447704 isoform X2 [Cucurbita moschata])

HSP 1 Score: 365 bits (936), Expect = 3.47e-126
Identity = 169/176 (96.02%), Postives = 171/176 (97.16%), Query Frame = 0


Query: 1   MTNTNSRRMIPRWTFETDDPHSLDSWITLQFSGPSENSNPQANSDTEAIRRVKITESHLQ 60
           MTNTNSRRMIPRWTFETDDPHSLDSWITLQFS PSENSNP ANSD EAIRRVKITESHLQ
Sbjct: 80  MTNTNSRRMIPRWTFETDDPHSLDSWITLQFSRPSENSNPAANSDMEAIRRVKITESHLQ 139

Query: 61  KDSSCAICKEEFEIGGEVRELPCRHFYHSDCIVPWLRIHSTCPICRYTLQNAIDGESSEE 120
           KDSSCAICKEEFEIGGEVRELPCRHFYHSDCIVPWLRIH+TCPICRYTLQNAIDGESSEE
Sbjct: 140 KDSSCAICKEEFEIGGEVRELPCRHFYHSDCIVPWLRIHNTCPICRYTLQNAIDGESSEE 199

Query: 121 SVEEGEGRGNGWWNVVRSWWPFRVIGDLARRLGFADYGDNLLALE-HSWMYSWLAN 175
           SVEEG+GRGNGWWNVVRSWWPFRVIGDLARRLGFADYGDNLLALE  SWMYSWLAN
Sbjct: 200 SVEEGDGRGNGWWNVVRSWWPFRVIGDLARRLGFADYGDNLLALEPDSWMYSWLAN 255

[Close]

BLAST of Csor.00g021150 vs. NCBI nr
Match: XP_023547958.1 (E3 ubiquitin-protein ligase RNF126-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 361 bits (927), Expect = 7.87e-125
Identity = 165/175 (94.29%), Postives = 169/175 (96.57%), Query Frame = 0


Query: 1   MTNTNSRRMIPRWTFETDDPHSLDSWITLQFSGPSENSNPQANSDTEAIRRVKITESHLQ 60
           MTNTNSRRMIPRWTFETDD HSLDSWITLQFS PSENSNP ANSD E IRRVKITESHLQ
Sbjct: 80  MTNTNSRRMIPRWTFETDDAHSLDSWITLQFSRPSENSNPAANSDMETIRRVKITESHLQ 139

Query: 61  KDSSCAICKEEFEIGGEVRELPCRHFYHSDCIVPWLRIHSTCPICRYTLQNAIDGESSEE 120
           KDSSCAICKEEFEIGG VRELPCRHFYHSDCIVPWLRIH+TCPICRYTLQNAIDGESSEE
Sbjct: 140 KDSSCAICKEEFEIGGAVRELPCRHFYHSDCIVPWLRIHNTCPICRYTLQNAIDGESSEE 199

Query: 121 SVEEGEGRGNGWWNVVRSWWPFRVIGDLARRLGFADYGDNLLALEHSWMYSWLAN 175
           SVEEG+GRGNGWWNVVRSWWPFRVIGDLARRLGFADYGDNLLALE+SWMYSWLA+
Sbjct: 200 SVEEGDGRGNGWWNVVRSWWPFRVIGDLARRLGFADYGDNLLALENSWMYSWLAD 254

[Close]

BLAST of Csor.00g021150 vs. NCBI nr
Match: XP_022982380.1 (uncharacterized protein LOC111481213 isoform X3 [Cucurbita maxima])

HSP 1 Score: 357 bits (916), Expect = 3.73e-123
Identity = 163/175 (93.14%), Postives = 169/175 (96.57%), Query Frame = 0


Query: 1   MTNTNSRRMIPRWTFETDDPHSLDSWITLQFSGPSENSNPQANSDTEAIRRVKITESHLQ 60
           MTNTNSRRMIPRWTFETDD HSLDSWITLQFS PSENSNP ANSDTEAIRRVKITESHLQ
Sbjct: 80  MTNTNSRRMIPRWTFETDDAHSLDSWITLQFSRPSENSNPPANSDTEAIRRVKITESHLQ 139

Query: 61  KDSSCAICKEEFEIGGEVRELPCRHFYHSDCIVPWLRIHSTCPICRYTLQNAIDGESSEE 120
           KDSSCAICKEEFEIGGEV+ELPCRHFYHSDCIVPWLRIH+TCP+CRYTLQNAIDGES EE
Sbjct: 140 KDSSCAICKEEFEIGGEVKELPCRHFYHSDCIVPWLRIHNTCPVCRYTLQNAIDGESFEE 199

Query: 121 SVEEGEGRGNGWWNVVRSWWPFRVIGDLARRLGFADYGDNLLALEHSWMYSWLAN 175
           SVEEG+GR NGWWNVVRSWWPFRVIGDLARRLGFAD GDNLLALE+SWMYSWLA+
Sbjct: 200 SVEEGDGRENGWWNVVRSWWPFRVIGDLARRLGFADNGDNLLALENSWMYSWLAD 254

[Close]

BLAST of Csor.00g021150 vs. ExPASy TrEMBL
Match: A0A6J1FSA6 (E3 ubiquitin-protein ligase RNF126-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111447704 PE=4 SV=1)

HSP 1 Score: 373 bits (957), Expect = 1.02e-129
Identity = 170/175 (97.14%), Postives = 172/175 (98.29%), Query Frame = 0


Query: 1   MTNTNSRRMIPRWTFETDDPHSLDSWITLQFSGPSENSNPQANSDTEAIRRVKITESHLQ 60
           MTNTNSRRMIPRWTFETDDPHSLDSWITLQFS PSENSNP ANSD EAIRRVKITESHLQ
Sbjct: 80  MTNTNSRRMIPRWTFETDDPHSLDSWITLQFSRPSENSNPAANSDMEAIRRVKITESHLQ 139

Query: 61  KDSSCAICKEEFEIGGEVRELPCRHFYHSDCIVPWLRIHSTCPICRYTLQNAIDGESSEE 120
           KDSSCAICKEEFEIGGEVRELPCRHFYHSDCIVPWLRIH+TCPICRYTLQNAIDGESSEE
Sbjct: 140 KDSSCAICKEEFEIGGEVRELPCRHFYHSDCIVPWLRIHNTCPICRYTLQNAIDGESSEE 199

Query: 121 SVEEGEGRGNGWWNVVRSWWPFRVIGDLARRLGFADYGDNLLALEHSWMYSWLAN 175
           SVEEG+GRGNGWWNVVRSWWPFRVIGDLARRLGFADYGDNLLALEHSWMYSWLAN
Sbjct: 200 SVEEGDGRGNGWWNVVRSWWPFRVIGDLARRLGFADYGDNLLALEHSWMYSWLAN 254

[Close]

BLAST of Csor.00g021150 vs. ExPASy TrEMBL
Match: A0A6J1FR69 (uncharacterized protein LOC111447704 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447704 PE=4 SV=1)

HSP 1 Score: 365 bits (936), Expect = 1.68e-126
Identity = 169/176 (96.02%), Postives = 171/176 (97.16%), Query Frame = 0


Query: 1   MTNTNSRRMIPRWTFETDDPHSLDSWITLQFSGPSENSNPQANSDTEAIRRVKITESHLQ 60
           MTNTNSRRMIPRWTFETDDPHSLDSWITLQFS PSENSNP ANSD EAIRRVKITESHLQ
Sbjct: 80  MTNTNSRRMIPRWTFETDDPHSLDSWITLQFSRPSENSNPAANSDMEAIRRVKITESHLQ 139

Query: 61  KDSSCAICKEEFEIGGEVRELPCRHFYHSDCIVPWLRIHSTCPICRYTLQNAIDGESSEE 120
           KDSSCAICKEEFEIGGEVRELPCRHFYHSDCIVPWLRIH+TCPICRYTLQNAIDGESSEE
Sbjct: 140 KDSSCAICKEEFEIGGEVRELPCRHFYHSDCIVPWLRIHNTCPICRYTLQNAIDGESSEE 199

Query: 121 SVEEGEGRGNGWWNVVRSWWPFRVIGDLARRLGFADYGDNLLALE-HSWMYSWLAN 175
           SVEEG+GRGNGWWNVVRSWWPFRVIGDLARRLGFADYGDNLLALE  SWMYSWLAN
Sbjct: 200 SVEEGDGRGNGWWNVVRSWWPFRVIGDLARRLGFADYGDNLLALEPDSWMYSWLAN 255

[Close]

BLAST of Csor.00g021150 vs. ExPASy TrEMBL
Match: A0A6J1J2H4 (uncharacterized protein LOC111481213 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111481213 PE=4 SV=1)

HSP 1 Score: 357 bits (916), Expect = 1.81e-123
Identity = 163/175 (93.14%), Postives = 169/175 (96.57%), Query Frame = 0


Query: 1   MTNTNSRRMIPRWTFETDDPHSLDSWITLQFSGPSENSNPQANSDTEAIRRVKITESHLQ 60
           MTNTNSRRMIPRWTFETDD HSLDSWITLQFS PSENSNP ANSDTEAIRRVKITESHLQ
Sbjct: 80  MTNTNSRRMIPRWTFETDDAHSLDSWITLQFSRPSENSNPPANSDTEAIRRVKITESHLQ 139

Query: 61  KDSSCAICKEEFEIGGEVRELPCRHFYHSDCIVPWLRIHSTCPICRYTLQNAIDGESSEE 120
           KDSSCAICKEEFEIGGEV+ELPCRHFYHSDCIVPWLRIH+TCP+CRYTLQNAIDGES EE
Sbjct: 140 KDSSCAICKEEFEIGGEVKELPCRHFYHSDCIVPWLRIHNTCPVCRYTLQNAIDGESFEE 199

Query: 121 SVEEGEGRGNGWWNVVRSWWPFRVIGDLARRLGFADYGDNLLALEHSWMYSWLAN 175
           SVEEG+GR NGWWNVVRSWWPFRVIGDLARRLGFAD GDNLLALE+SWMYSWLA+
Sbjct: 200 SVEEGDGRENGWWNVVRSWWPFRVIGDLARRLGFADNGDNLLALENSWMYSWLAD 254

[Close]

BLAST of Csor.00g021150 vs. ExPASy TrEMBL
Match: A0A6J1IZ58 (uncharacterized protein LOC111481213 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111481213 PE=4 SV=1)

HSP 1 Score: 352 bits (902), Expect = 2.54e-121
Identity = 163/176 (92.61%), Postives = 168/176 (95.45%), Query Frame = 0


Query: 1   MTNTNSRRMIPRWTFETDDPHSLDSWITLQFSGPSENSNPQANSDTEAIRRVKITESHLQ 60
           MTNTNSRRMIPRWTFETDD HSLDSWITLQFS PSENSNP ANSDTEAIRRVKITESHLQ
Sbjct: 80  MTNTNSRRMIPRWTFETDDAHSLDSWITLQFSRPSENSNPPANSDTEAIRRVKITESHLQ 139

Query: 61  KDSSCAICKEEFEIGGEVRELPCRHFYHSDCIVPWLRIHSTCPICRYTLQNAIDGESSEE 120
           KDSSCAICKEEFEIGGEV+ELPCRHFYHSDCIVPWLRIH+TCP+CRYTLQNAIDGES EE
Sbjct: 140 KDSSCAICKEEFEIGGEVKELPCRHFYHSDCIVPWLRIHNTCPVCRYTLQNAIDGESFEE 199

Query: 121 SVEEGEGRGNGWWNVVRSWWPFRVIGDLARRLGFADYGDNLLALE-HSWMYSWLAN 175
           SVEEG+GR NGWWNVVRSWWPFRVIGDLARRLGFAD GDNLLALE  SWMYSWLA+
Sbjct: 200 SVEEGDGRENGWWNVVRSWWPFRVIGDLARRLGFADNGDNLLALETDSWMYSWLAD 255

[Close]

BLAST of Csor.00g021150 vs. ExPASy TrEMBL
Match: A0A6J1FWW3 (uncharacterized protein LOC111447704 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447704 PE=4 SV=1)

HSP 1 Score: 349 bits (895), Expect = 3.28e-120
Identity = 160/165 (96.97%), Postives = 162/165 (98.18%), Query Frame = 0


Query: 1   MTNTNSRRMIPRWTFETDDPHSLDSWITLQFSGPSENSNPQANSDTEAIRRVKITESHLQ 60
           MTNTNSRRMIPRWTFETDDPHSLDSWITLQFS PSENSNP ANSD EAIRRVKITESHLQ
Sbjct: 80  MTNTNSRRMIPRWTFETDDPHSLDSWITLQFSRPSENSNPAANSDMEAIRRVKITESHLQ 139

Query: 61  KDSSCAICKEEFEIGGEVRELPCRHFYHSDCIVPWLRIHSTCPICRYTLQNAIDGESSEE 120
           KDSSCAICKEEFEIGGEVRELPCRHFYHSDCIVPWLRIH+TCPICRYTLQNAIDGESSEE
Sbjct: 140 KDSSCAICKEEFEIGGEVRELPCRHFYHSDCIVPWLRIHNTCPICRYTLQNAIDGESSEE 199

Query: 121 SVEEGEGRGNGWWNVVRSWWPFRVIGDLARRLGFADYGDNLLALE 165
           SVEEG+GRGNGWWNVVRSWWPFRVIGDLARRLGFADYGDNLLALE
Sbjct: 200 SVEEGDGRGNGWWNVVRSWWPFRVIGDLARRLGFADYGDNLLALE 244

[Close]

BLAST of Csor.00g021150 vs. TAIR 10
Match: AT1G68180.1 (RING/U-box superfamily protein )

HSP 1 Score: 107.5 bits (267), Expect = 1.1e-23
Identity = 55/119 (46.22%), Postives = 70/119 (58.82%), Query Frame = 0


Query: 40  PQANSDTEAIRRVKITESHLQKDSSCAICKEEFEIGGEVRELPCRHFYHSDCIVPWLRIH 99
           P + S  EA+R V IT+  L K+  CAICKEEFE+G E +EL C H YHS CIV WL IH
Sbjct: 113 PASQSAIEAVRTVIITDEDLVKEKVCAICKEEFEVGEEGKELKCLHLYHSSCIVSWLNIH 172

Query: 100 STCPICRYTLQNAIDGESSEESVEEG------EGRGNGWWNVVRSWWPFRVIGDLARRL 153
           +TCPICR+ +   +    SE +V+EG        R N +   V S WP R++ D    L
Sbjct: 173 NTCPICRFEVNLGV----SESNVDEGGSYNIDNDRSNRFRTRVCSLWPLRMMIDWVHNL 227

[Close]

BLAST of Csor.00g021150 vs. TAIR 10
Match: AT2G40830.2 (RING-H2 finger C1A )

HSP 1 Score: 101.7 bits (252), Expect = 6.2e-22
Identity = 49/122 (40.16%), Postives = 67/122 (54.92%), Query Frame = 0


Query: 40  PQANSDTEAIRRVKITESHLQ-KDSSCAICKEEFEIGGEVRELPCRHFYHSDCIVPWLRI 99
           P   S  +A+  +KI + HL+  DS+C +CK+EFE+G E +++PC H YHSDCIVPWL  
Sbjct: 164 PAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQ 223

Query: 100 HSTCPICRYTLQNAIDGESSE--------------ESVEEGEGRGNGWWNVVRSWWPFRV 147
           H++CP+CR  L +A    SS+               S       GN   N   S+WPFR 
Sbjct: 224 HNSCPVCRQELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWPFRS 283

[Close]

BLAST of Csor.00g021150 vs. TAIR 10
Match: AT2G40830.1 (RING-H2 finger C1A )

HSP 1 Score: 101.7 bits (252), Expect = 6.2e-22
Identity = 49/122 (40.16%), Postives = 67/122 (54.92%), Query Frame = 0


Query: 40  PQANSDTEAIRRVKITESHLQ-KDSSCAICKEEFEIGGEVRELPCRHFYHSDCIVPWLRI 99
           P   S  +A+  +KI + HL+  DS+C +CK+EFE+G E +++PC H YHSDCIVPWL  
Sbjct: 164 PAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQ 223

Query: 100 HSTCPICRYTLQNAIDGESSE--------------ESVEEGEGRGNGWWNVVRSWWPFRV 147
           H++CP+CR  L +A    SS+               S       GN   N   S+WPFR 
Sbjct: 224 HNSCPVCRQELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWPFRS 283

[Close]

BLAST of Csor.00g021150 vs. TAIR 10
Match: AT2G40830.3 (RING-H2 finger C1A )

HSP 1 Score: 101.7 bits (252), Expect = 6.2e-22
Identity = 49/122 (40.16%), Postives = 67/122 (54.92%), Query Frame = 0


Query: 40  PQANSDTEAIRRVKITESHLQ-KDSSCAICKEEFEIGGEVRELPCRHFYHSDCIVPWLRI 99
           P   S  +A+  +KI + HL+  DS+C +CK+EFE+G E +++PC H YHSDCIVPWL  
Sbjct: 164 PAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQ 223

Query: 100 HSTCPICRYTLQNAIDGESSE--------------ESVEEGEGRGNGWWNVVRSWWPFRV 147
           H++CP+CR  L +A    SS+               S       GN   N   S+WPFR 
Sbjct: 224 HNSCPVCRQELPSASGPSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWPFRS 283

[Close]

BLAST of Csor.00g021150 vs. TAIR 10
Match: AT3G56580.2 (RING/U-box superfamily protein )

HSP 1 Score: 99.4 bits (246), Expect = 3.1e-21
Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 0


Query: 40  PQANSDTEAIRRVKITESHLQ-KDSSCAICKEEFEIGGEVRELPCRHFYHSDCIVPWLRI 99
           P   S  +A+  +KIT+ HL+  DS C +CK+EFE+  E +++PC H YHSDCIVPWL  
Sbjct: 160 PAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQ 219

Query: 100 HSTCPICRYTLQNAIDGESSEESVEEG-EGRGNG-WWNVVRSWWPFR 144
           H++CP+CR  L +     S++ S      GR N    N+  + WPFR
Sbjct: 220 HNSCPVCRKELPSRGSSSSTQSSQNRSTNGRENSRRRNIFSNLWPFR 266

The following BLAST results are available for this feature:

BLAST of Csor.00g021150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22197	8.8e-21	40.16	Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q94AK4	4.4e-20	42.99	E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV...	[more]
Q9SNB6	4.1e-18	43.30	E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 ...	[more]
Q8LPN7	7.0e-18	35.09	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
Q940T5	9.1e-18	38.46	E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ...	[more]

BLAST of Csor.00g021150 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6600352.1	1.39e-134	100.00	putative E3 ubiquitin-protein ligase RHC1A, partial [Cucurbita argyrosperma subs...	[more]
XP_022942768.1	2.11e-129	97.14	E3 ubiquitin-protein ligase RNF126-like isoform X3 [Cucurbita moschata] >XP_0229...	[more]
XP_022942766.1	3.47e-126	96.02	uncharacterized protein LOC111447704 isoform X2 [Cucurbita moschata] >XP_0229427...	[more]
XP_023547958.1	7.87e-125	94.29	E3 ubiquitin-protein ligase RNF126-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022982380.1	3.73e-123	93.14	uncharacterized protein LOC111481213 isoform X3 [Cucurbita maxima]	[more]

BLAST of Csor.00g021150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FSA6	1.02e-129	97.14	E3 ubiquitin-protein ligase RNF126-like isoform X3 OS=Cucurbita moschata OX=3662...	[more]
A0A6J1FR69	1.68e-126	96.02	uncharacterized protein LOC111447704 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1J2H4	1.81e-123	93.14	uncharacterized protein LOC111481213 isoform X3 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1IZ58	2.54e-121	92.61	uncharacterized protein LOC111481213 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1FWW3	3.28e-120	96.97	uncharacterized protein LOC111447704 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Csor.00g021150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68180.1	1.1e-23	46.22	RING/U-box superfamily protein	[more]
AT2G40830.2	6.2e-22	40.16	RING-H2 finger C1A	[more]
AT2G40830.1	6.2e-22	40.16	RING-H2 finger C1A	[more]
AT2G40830.3	6.2e-22	40.16	RING-H2 finger C1A	[more]
AT3G56580.2	3.1e-21	42.99	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 65..105 e-value: 2.1E-7 score: 40.6
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 64..106 e-value: 5.9E-13 score: 48.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 65..106 score: 12.267982
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 30..112 e-value: 4.8E-22 score: 79.4
None	No IPR available	PANTHER	PTHR15710:SF116	ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN	coord: 37..148
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 37..148
None	No IPR available	CDD	cd16667	RING-H2_RNF126_like	coord: 64..106 e-value: 2.85656E-24 score: 87.3732
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 48..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g021150.m01	Csor.00g021150.m01	mRNA