Csor.00g016190 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGTTTCTCAAGCAAGTCTTCTCCTTCAGAAGCAGCTTAAAGGTAGATTTTTATTTACTTTGATTCGATTCTTTTTTTTTTTTTTTTTTCTTTTCCGATTCTGTGAATCATCGAGTCGTAGGGTTTATTTCGATGCGTTCTTTTGAACTGTTGTCTGGCTACTCTCTTTTGTGTCTTTCAGATCTCTGCAAGAACCCTGTCGATGGATTCTCCGCTGGTCTGGTGGATGAGAGCAATATATTTGAATGGAGCGTCACGATTATTGGTCCCCCTGATACGCTTTAGTATGTTTTTACACTGCTTCAATTTTCAATTCCTTGTTCTGTTTTAAATTTAGGGTTTATATTGGTTTTTATAGCCAGGTAATATTGTTGATCTTGAATAAAATGGTTTAGGTGTTGATTTGCCTTATTTCTCTTGTTACATATGGGTTTTGGTCTAATTATTGTTCATTTGCGTTCTTTGTTATTCTTTTTAATTCATACGTTCTATCATTGTGGAAAGGAAACTCCCCTCAATTCCGATTGCGAATGTTTGGTTATATTTGTGTTTTGCCAGTCTTGATCATTTGAAGTTAGTTTGGCTGTTTTTCTATTGGTTAATATCTGAATGTGAATCTAATGAGAATTCTTGTTATAATAATCTAATTGCAGCGAGGGGGGTTTCTTTAACGCCATTATGAGTTTTCCATCAAATTATCCAAATAGTGCTCCGTCCGTCAAGTTTACTTCAGAGATTTGGCATCCTAATGGTTTGTTACTCTTGTTATTATATTATTTGGTATTCTCTTTCTTCTCATTGAAGAATTTGAGTTTGATTTCTTGAATTGTAGTCTATCCTGATGGGCGTGTTTGTATTTCAATCCTTCACCCCCCTGGTGATGATCCTAATGGCTATGAGCTTGCTAGTGAGCGTTGGACCCCTGTTCATACGGTATCTATTATTTTATATCAATTTTTTAATATTTAAATATGTCTTGCTTTTCATTCATAAATGAAACTCTTTCTTCTAAAAAAGAAACAAAGAGAAAAAAAAATGTTTCTTTTTATTTTCTCATTATCATCCTGTTGGTAAAATGGGTTTAGAAGTTTAAATTTGAAGTTATGGATGTCCTTTATTCTCTATTTACTTTGTACTTTGGCAAGAGCGTGTAGAGCCACTTGTATAAAACGGATGATGACTGGTTAGGAAGGTTTATTAAACAATTTAATATTATTCTAGAGTTCCATCATTCACAAGATTTGAATGCAAGAATATCCCCTAAGAAGCACAAATATGATATAGGGACACGAAACAAATACGGTGACATGTCATCTTTTTTAAAAATCTAGGATATGGACATGACAATGACACATTTATTAAACTAGGTCTAATTTTTATACAAGAAAGAAGTTCAAAGTCAATCAGTTTATGCATTTATATGCCTACAAAATAAGTTTGATATATTTCACTCTTTAAATTTTTCTAAGTCAAGTGTTAGATACATGTCTAACAAATAAAGATTGGACCTATGTTGACTTTGTACAATTAGTGTCTAATATGTCCATTGTGTTAACAAGTGTCCAATAGCCAAACTAAAGTATCCATGCGTCTTAGAATTTCACCCTTGAATACTCGAGGCAGAAGCAATATTAGACTCTTGAATAATATGACCACCTTGTGTTGACCTAGAGATCAATTGGGCGAGGTAAATAAAGGGCTTATAGGGGATCAATTCAAGCCATAGTAACCACCTATGTAGGATTTAATATCCTATGAGTTGCCTTTATATTTAGACATAGAGACTTTCTTCCCTGCAATGTTCATTAATCTTATCTTTTTAGCCTTCTCACAACTAGAGCAAATGATGTGGTGTAGGCACTTTGTTTTCCTTGGGGTTTCGTAAATATTAATGAAGACTCTGTTGTTATTGGTGTAGGTTGAAAGCATAGTTTTGAGTATTATATCAATGCTATCGAGCCCCAATGATGAATCGCCTGCGAATGTTGAAGCTGCTGTAAGTGATTGTGTTCCAGCTTGTTTACCAACTTTTGTTCTATCTATGCTTCATATATGGCTACATGCATTTGTTTTTGTTTTGAGTATTTTACATGGGATTGCATTATGTCTTTATATTAGCTGAATTAAAGAAATCACCTGCAGGATCGAAATATGCATTATACTCTTCTTTTGTGTACATGGATATCACATCAAAGTTAATGTTTTTCCTTAAACCTATAGAAATGTTAATGTACATGGATATCAGCGCTAAAACAGTTGACGTCGTTATTTGTATATGGGGCCCTCTACCTATAGAAATGTTAAATATGGTTTGAGTATTTAAAAATACCTTAAAAGTGACCCCATTGTTGGGGTCGGAAAATGCAATCACATGCAACATGGTTCATAGTAGGTCCTACTTTTTGTGACTGTTTTCTTGAGTTCTGCTTTCTTTTTTGGGTAGGGCTTGGGTGCATAGTATTTCTCTACACACGGTTCATGCACACACTTATGAACCCATTAGGTGGGCTCGTATACGTACCCCTTAAACCTGACTAGGGGCTAGTGCATGCTCATGTTGGTGGAAGCTAATGAAAAGAAAAGAGCGCATCATATCATGATGTACACGTCCATACAAAACATACTAGGAAAGTAACTTGTGCCAGTGACAGATACAACATGCACGAGGTTTTGCATTTTAAATAATGGTACATGGTTATGAAGCACATCATTCACTCGTACTTTTCATGACATATTTTTCATATGAGACAAACATACATGTGCATGTTCAATCATTCGTACTTATCGTACATGGCTCATCAAGTGTCTCATAGAGCATAACATGAACGTAGTTTCATAGCATACATGGATTAACATACTGGAAGTATATGCATCATGGATAATTTATAAGAATATTATAATACAAGAATTAACACGTAGATAAGTCACATTGTATGTGCTATAATCATATGTAAGTAGAGGTTTGGTTTTGAAGTTAACTTCAAACTTGCTTCCTCTCCTTTTTTTTTTTTTTTTTTTTTTCTCTCTCTCTCTCTCTTCTTCTCCTTTCTTCTTCCTTTTTTCTTGTTATTTTCAAAATTGGTGTGACTAGATATAAAAAAGGATGATATGGAGATGAGAAATAAGGAGAGGGACGAGTTGAGATTATGGAAATGTTTGGTTTAGGAGATCATTTATAGGGGAAAGGAGAAGAAGAAGTGGAAGAAATGAGGAGAAGTGGTTGAGAGGTTGAGGGATTTGAGGGAGTTCAGATTTTTAATGGAAAGGTAGAAGACTATTTAAGTTGTAGACCAACTCTAGCCTCAACCATTCACATTCAACTTAAGGTAGAAGACTATTTAAGTTGTAGACCAACTCTAGCCTCAACCATTCACATTCAACTTAAGGTAGAAGACTATTTAAGTTGTAGACCAACTCTAGCCTCAACCATTCACATTCAACTTAAGGTAGAAGACTATTTCAGAATGAGGATGCGTATGACCCGAAGTAGATAGAAAGTTACGCCGACATGAAGCATAGAACTTGGAGTTTGAGATAGGTGACAAGGTATTCCTAAAGGCGGCACCGTTAAAGGGAATTTGAGATTTGGATGTAAGAGCAAGTTGAACTCGTGCTACATTAGACCTTTTGAGGTGTTCGATTACTATTGGGGACAAAAGTTTTTTTTAGATGCAACAAAAAAGAAAAAAAAAAAAAAAACATAGTAATCTCCCATTTTCCCCTTAAAAATCTCAACCCTTTAACTCAACTCCCTCAACCTCTCAACCTCTTCTTTCCATTTTCTCTTTTCCTTCCCTTATAAATAATTTCTCAAACCCACTATTTTTATTATCTCAACTCATTGCTTTTCTTATTTCTCCATCTCCATATCATCATTCTTTTATCTCTAGCCAAAATCAATTTGGAGAATTAAAAGATGAAAGAAAGGAGAAGAAAGAAAGAAGAGAGTGAAAATATATGTTCGAAATTAGCTTCAGAACTAGGTCTCGACAAACAGGATCAAATGAACATCAACCCAAGAATTTAGTGATTATGGTTTAGGCCTACAAGTTATTGAATTTCCAGTTGGAGCACTTTCAAGCTTAGTTGGATAATTGTATGATGTATGATTATTACGTACTATGTGGTTTATACATCTTAATTCTTGTATTATGGTATTTCTATGAATTTTCTATGATGCATGGACTTTTGAGTCTATTGATTCGTTTATGCTATGAAACTATGTTGACATTGTACCATATGAGACACTTGATGAGTCATGTATGTTGTACATTTATGTATGTCTCATTATAAAGGTTATGTAATGAAAAGTATGTAAGTATGAATCATAAAAATGTTCCATGATTTAGAATGTGGGATCTCATGCATGTTGTATGTCACAAGCATGAGTACTTCTCTAACATGTTTTGTATGGATGCATACACCATAATATGATACATGTTCCTTTCTATTGGTTTTCGGTAGCATGAGTGTGTATTAGCATATAGTCAACTTAGGGGGTACGTATACGAGCTGCCTAGTGGATTCTTGCACGCATATGTGAACCACGTGTAGAGAAATATTATGCATCAAACCTTATATGAAAAAGAAAGTAGATCCTAAGGAATAGTCATGAAAAGTAAGTCCCAACATGAATCTTGGTGGTTATTTTAAATAATCAAACCACATTTAACATTTTACCGCTAAAAAACAAGGGTCCCATATGCGGACAACGGTATCAGATGAGAAAGTTATGGAACCCATACCAGATAGATAGTTTTTACGCATTTAAGTTGTAGACTCCATGTTGAAGAAGGATCTGAGTATTTTATCTCAAAACTTTGATAGGTGTTATTTTTTTATTTTAGACCATGCTATTATTATTTTCCATATGCGTATAAGTTTTAAACTATTTTTAAATGATTTTCTACCCATAGTAGTTATGACATGTATGTAATAGTTGTCTTATTTTAAAGGAAAAAGTAGGGTCGTTACATGTTTCACCAACCTGGTGGTGTTGACTGAGAGTTGTGTTGAATATAGGTTGGATGTCATGTTCTAAGTCGAATTGGGTTTTCATTATATGGTTTTGGGATCTTCTAAAAACCTCTTGAATATCTATAGTTTTTTTTTTTCTTTTTTTCTTTTTTTCTTTTTTCCCTTATCCCAGTTTGTTAAATGCTTTATAGGCGATGGCTTGGACACCTATTTTTGGGAGGATTGTTGAGTGGGGGAAAACCCCTTTGCTGGTTGTGTATTAAGTTTTAATTTGTGGCATCTGTTTTGTTGGCTTGGAGTGAGTCTTTCTGTTTTGGGGTTTGGCTGCCTTTCATGGATAGGCAGTCATTGAAGGTTTCTACTTTAATCTTTCTTTCAAGGGATTCTTACTTATGTCATGGGGCAGGAGGGATTCTTCGTATCATGGATGAACCCTTGCTTTTCAGAGTTTTTTTTTTTCTCTTTTCTTTTCAAGTTTCCTCTCCCATGTTTTTAGCGTTTCCTCACTACTCCTCACTTCCCCGTCACCCCTTCATTTTCCTCGCTTTGGAAGGTTAGATCTGTAAGAAGATAAAGTTCTTTGCCCAATAGGGGTCTTGTAGGGGGAAGTTCATTCTTCAGGCCATGTGCAGAGAAACTCTTCCGTTTATTGGAGAGCCCTAGTGGTGCTGTCTTAGAGTTGCATCGAATGACCGTGACTATATCCTTGAGATTTTGATCGGTTGATTTGGTCTAGGTTCTTAGACGCCTTTGGAGTTTCTATGGTTGTGGAGCATGAATTGCAGGGATATGAGGGAGAGATTTTGTTGGATCCTCTTTTTAGAGGGAAAGAGAGGGTGAGAGAACTAGGGGGGAGCTGTGGGTATAAGGCCTTTTGTCATTCTTTTGGATTGAGCTCTTTTTTTTATTTTTTTTATTTTTATTTTTTAAATAGTGTATATATAAGAAGTTGTATTGAATCATTGATCTTATTGGGCATCTAATTTGATTCAAGGAATTGTTTACATGTGTGTTGGTGCAGAAGGAATGGAGGGAGAGGAGGGAAGATTTCAAGAAGAAGGTAAGCCGCTGCGTGAGGAAGTCACAGGAAATGTTATGA ATGGCTGTTTCTCAAGCAAGTCTTCTCCTTCAGAAGCAGCTTAAAGATCTCTGCAAGAACCCTGTCGATGGATTCTCCGCTGGTCTGGTGGATGAGAGCAATATATTTGAATGGAGCGTCACGATTATTGGTCCCCCTGATACGCTTTACGAGGGGGGTTTCTTTAACGCCATTATGAGTTTTCCATCAAATTATCCAAATAGTGCTCCGTCCGTCAAGTTTACTTCAGAGATTTGGCATCCTAATGTCTATCCTGATGGGCGTGTTTGTATTTCAATCCTTCACCCCCCTGGTGATGATCCTAATGGCTATGAGCTTGCTAGTGAGCGTTGGACCCCTGTTCATACGGTTGAAAGCATAGTTTTGAGTATTATATCAATGCTATCGAGCCCCAATGATGAATCGCCTGCGAATGTTGAAGCTGCTAAGGAATGGAGGGAGAGGAGGGAAGATTTCAAGAAGAAGGTAAGCCGCTGCGTGAGGAAGTCACAGGAAATGTTATGA ATGGCTGTTTCTCAAGCAAGTCTTCTCCTTCAGAAGCAGCTTAAAGATCTCTGCAAGAACCCTGTCGATGGATTCTCCGCTGGTCTGGTGGATGAGAGCAATATATTTGAATGGAGCGTCACGATTATTGGTCCCCCTGATACGCTTTACGAGGGGGGTTTCTTTAACGCCATTATGAGTTTTCCATCAAATTATCCAAATAGTGCTCCGTCCGTCAAGTTTACTTCAGAGATTTGGCATCCTAATGTCTATCCTGATGGGCGTGTTTGTATTTCAATCCTTCACCCCCCTGGTGATGATCCTAATGGCTATGAGCTTGCTAGTGAGCGTTGGACCCCTGTTCATACGGTTGAAAGCATAGTTTTGAGTATTATATCAATGCTATCGAGCCCCAATGATGAATCGCCTGCGAATGTTGAAGCTGCTAAGGAATGGAGGGAGAGGAGGGAAGATTTCAAGAAGAAGGTAAGCCGCTGCGTGAGGAAGTCACAGGAAATGTTATGA MAVSQASLLLQKQLKDLCKNPVDGFSAGLVDESNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSAPSVKFTSEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANVEAAKEWRERREDFKKKVSRCVRKSQEML Homology
BLAST of Csor.00g016190 vs. ExPASy Swiss-Prot
Match: Q42541 (Ubiquitin-conjugating enzyme E2 13 OS=Arabidopsis thaliana OX=3702 GN=UBC13 PE=2 SV=1) HSP 1 Score: 313.2 bits (801), Expect = 1.8e-84 Identity = 148/163 (90.80%), Postives = 157/163 (96.32%), Query Frame = 0
BLAST of Csor.00g016190 vs. ExPASy Swiss-Prot
Match: Q42540 (Ubiquitin-conjugating enzyme E2 7 OS=Arabidopsis thaliana OX=3702 GN=UBC7 PE=1 SV=1) HSP 1 Score: 311.6 bits (797), Expect = 5.3e-84 Identity = 146/163 (89.57%), Postives = 158/163 (96.93%), Query Frame = 0
BLAST of Csor.00g016190 vs. ExPASy Swiss-Prot
Match: P42747 (Ubiquitin-conjugating enzyme E2 14 OS=Arabidopsis thaliana OX=3702 GN=UBC14 PE=1 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 1.9e-81 Identity = 143/167 (85.63%), Postives = 156/167 (93.41%), Query Frame = 0
BLAST of Csor.00g016190 vs. ExPASy Swiss-Prot
Match: P25868 (Ubiquitin-conjugating enzyme E2 7 OS=Triticum aestivum OX=4565 GN=UBC7 PE=2 SV=1) HSP 1 Score: 263.5 bits (672), Expect = 1.7e-69 Identity = 122/147 (82.99%), Postives = 136/147 (92.52%), Query Frame = 0
BLAST of Csor.00g016190 vs. ExPASy Swiss-Prot
Match: Q9Y818 (Ubiquitin-conjugating enzyme E2 15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ubc15 PE=1 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 4.9e-61 Identity = 110/167 (65.87%), Postives = 136/167 (81.44%), Query Frame = 0
BLAST of Csor.00g016190 vs. NCBI nr
Match: XP_022964978.1 (ubiquitin-conjugating enzyme E2 13 [Cucurbita moschata] >XP_022970574.1 ubiquitin-conjugating enzyme E2 13 [Cucurbita maxima] >XP_023520309.1 ubiquitin-conjugating enzyme E2 13 [Cucurbita pepo subsp. pepo] >KAG6583439.1 Ubiquitin-conjugating enzyme E2 13, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 342 bits (876), Expect = 1.58e-118 Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0
BLAST of Csor.00g016190 vs. NCBI nr
Match: XP_008457496.1 (PREDICTED: ubiquitin-conjugating enzyme E2 7 [Cucumis melo] >XP_011658058.1 ubiquitin-conjugating enzyme E2 7 [Cucumis sativus] >XP_038895341.1 ubiquitin-conjugating enzyme E2 7 [Benincasa hispida] >KGN65703.1 hypothetical protein Csa_019581 [Cucumis sativus]) HSP 1 Score: 338 bits (868), Expect = 2.62e-117 Identity = 165/167 (98.80%), Postives = 166/167 (99.40%), Query Frame = 0
BLAST of Csor.00g016190 vs. NCBI nr
Match: XP_022157888.1 (ubiquitin-conjugating enzyme E2 7 isoform X1 [Momordica charantia]) HSP 1 Score: 338 bits (867), Expect = 3.72e-117 Identity = 164/167 (98.20%), Postives = 166/167 (99.40%), Query Frame = 0
BLAST of Csor.00g016190 vs. NCBI nr
Match: XP_022949331.1 (ubiquitin-conjugating enzyme E2 7 [Cucurbita moschata] >XP_022998258.1 ubiquitin-conjugating enzyme E2 7 [Cucurbita maxima] >XP_023523182.1 ubiquitin-conjugating enzyme E2 7 [Cucurbita pepo subsp. pepo] >KAG6607231.1 Ubiquitin-conjugating enzyme E2 7, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 338 bits (866), Expect = 5.28e-117 Identity = 164/167 (98.20%), Postives = 166/167 (99.40%), Query Frame = 0
BLAST of Csor.00g016190 vs. NCBI nr
Match: NP_001237657.1 (ubiquitin-conjugating enzyme E2 [Glycine max] >XP_028195407.1 ubiquitin-conjugating enzyme E2 7-like [Glycine soja] >ACU14107.1 unknown [Glycine max] >KAG4967261.1 hypothetical protein JHK87_032912 [Glycine soja] >KAG4979720.1 hypothetical protein JHK85_033678 [Glycine max] >KAG4985370.1 hypothetical protein JHK86_033061 [Glycine max] >KAG5118553.1 hypothetical protein JHK82_032973 [Glycine max]) HSP 1 Score: 333 bits (854), Expect = 3.57e-115 Identity = 161/167 (96.41%), Postives = 165/167 (98.80%), Query Frame = 0
BLAST of Csor.00g016190 vs. ExPASy TrEMBL
Match: A0A6J1I5Z8 (ubiquitin-conjugating enzyme E2 13 OS=Cucurbita maxima OX=3661 GN=LOC111469510 PE=3 SV=1) HSP 1 Score: 342 bits (876), Expect = 7.63e-119 Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0
BLAST of Csor.00g016190 vs. ExPASy TrEMBL
Match: A0A6J1HMH7 (ubiquitin-conjugating enzyme E2 13 OS=Cucurbita moschata OX=3662 GN=LOC111464927 PE=3 SV=1) HSP 1 Score: 342 bits (876), Expect = 7.63e-119 Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0
BLAST of Csor.00g016190 vs. ExPASy TrEMBL
Match: A0A0A0LVA7 (UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G503400 PE=3 SV=1) HSP 1 Score: 338 bits (868), Expect = 1.27e-117 Identity = 165/167 (98.80%), Postives = 166/167 (99.40%), Query Frame = 0
BLAST of Csor.00g016190 vs. ExPASy TrEMBL
Match: A0A1S3C5M4 (ubiquitin-conjugating enzyme E2 7 OS=Cucumis melo OX=3656 GN=LOC103497173 PE=3 SV=1) HSP 1 Score: 338 bits (868), Expect = 1.27e-117 Identity = 165/167 (98.80%), Postives = 166/167 (99.40%), Query Frame = 0
BLAST of Csor.00g016190 vs. ExPASy TrEMBL
Match: A0A6J1DUK7 (ubiquitin-conjugating enzyme E2 7 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024496 PE=3 SV=1) HSP 1 Score: 338 bits (867), Expect = 1.80e-117 Identity = 164/167 (98.20%), Postives = 166/167 (99.40%), Query Frame = 0
BLAST of Csor.00g016190 vs. TAIR 10
Match: AT3G46460.1 (ubiquitin-conjugating enzyme 13 ) HSP 1 Score: 313.2 bits (801), Expect = 1.3e-85 Identity = 148/163 (90.80%), Postives = 157/163 (96.32%), Query Frame = 0
BLAST of Csor.00g016190 vs. TAIR 10
Match: AT5G59300.1 (ubiquitin carrier protein 7 ) HSP 1 Score: 311.6 bits (797), Expect = 3.8e-85 Identity = 146/163 (89.57%), Postives = 158/163 (96.93%), Query Frame = 0
BLAST of Csor.00g016190 vs. TAIR 10
Match: AT3G55380.1 (ubiquitin-conjugating enzyme 14 ) HSP 1 Score: 303.1 bits (775), Expect = 1.3e-82 Identity = 143/167 (85.63%), Postives = 156/167 (93.41%), Query Frame = 0
BLAST of Csor.00g016190 vs. TAIR 10
Match: AT3G55380.2 (ubiquitin-conjugating enzyme 14 ) HSP 1 Score: 283.1 bits (723), Expect = 1.4e-76 Identity = 141/201 (70.15%), Postives = 156/201 (77.61%), Query Frame = 0
BLAST of Csor.00g016190 vs. TAIR 10
Match: AT5G62540.1 (ubiquitin-conjugating enzyme 3 ) HSP 1 Score: 114.4 bits (285), Expect = 8.9e-26 Identity = 57/154 (37.01%), Postives = 87/154 (56.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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