Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCGTCTTCGCCGCGCCGCCGTCTCAAGTGGATCTCTCTTCTCACCGCCCAAGTTTGGATCACAAAGCCTTTCTTCCTTCCATCGTCGGCGTTAAATTTCATCGGAATGGCTTTCCTATTCCTTCTTTCAGGTATCCGTAGTTTAATCACTCCTCTTCGATCCCTCGCATTCGACTTATTTGATCTCTGTAGATTTCAGGTCTGTTGTATATTGTTAATGAGACTAGTGATCGCTTTAGTAATGAAGTTCATCTGTTAGTTCTGTGAAGTAGTTCGACTTTGATCCTTTTGTTGATATTTGATAATGGAATCTGGCAGGTTGTTGCTAATTCCTAATTGTTTTTTGCTACTAACGCCAGGTGCTTATAAACTAGTATTATATTTTGTTTTTCGGAATTTTTATTAGTTTTCGTGTTCAGCAGTCCTCTACGATCCCTCGCATTAGACACAATTATTCCAGAAGATATCTGTACTGTTACCCTTGCAATGAGCATGTTAACAATGAAGTTCATCTGTTGCTTAGTTCTGTAAAGTGAATCCACCTTGATTCTTGTGATGGAAATGGAATTTGGCAGGTAGTAAAACACTGAATCTTAATTGGTTTTCGCTATGCTACTCCCGCAAGGAACTTATACTAGCATTAGGATCTTGCCTTTATTTTTCTGGTTTTCTTCCAATTCCAAGTTGAAACAGGATGAATCTTTGATTTGATACTTTCTGGCTTCCGGATGCGCCTGGGGAAAGTTTATTAGTTCTTTCTGAAAGCTCTCCTCTGATTGTGAAGTAGTTACATTTAAGACTGCCAGAAAATGATAATTCTGGAATGGCCTCTATAATTTCTTTGAAAAACATAGACCTTTTGGATGAATCACAGCTGTTGGAGGAACCACAGTAATAATAAATGGTTTAAATCTGTACAACAATTAATTGAATTCTATCATCTTCTCAAGTTGTCAGTTGGCTCAACAATTAATTTGGAGTTTCCTCTTTAAAATCTTCTGGAAGTATTGGTGCAAATACTGTTTCCTACCATTCATGGTTTGATCTTTATGGTATTTTGTCTGTTTAGACTTTCATTTACTTCAACTCTTTCCTCACAAAGACATGATATACTTATATAAAGCTAAATCAGTAGCTGAGATCCTCCTTGCATCTGCTAGTCAGATTTGCCAGAAATTAGAACACACCTAATCTGAGATGACTGATACTTGTAATCACAATATTGCTACTCAGCTGAGTGGTTGTGTGATTTCTTTTATGCAGGTACAAGAACACCAAAGGATTGGAATTGAGGCAAAGATCTTTTTCTATAACAGCATCAAATTCCTCAGATGGGAATTCCACCAAGGAGAAAAATGATGGAAGTAAAGTAACTGGTGATGCCCAAGGTCCTCCATTTCTTACCATTTTGGCTGGATTTTTTGTCTTTTCCCTCGTCCTTTGGATAGTCAGTTCCTCTGTCACAACCCTTATAGCTCTAGTCGTCAAGTTGATCTCAACAAAGTAA
mRNA sequence
ATGGCTTCCGTCTTCGCCGCGCCGCCGTCTCAAGTGGATCTCTCTTCTCACCGCCCAAGTTTGGATCACAAAGCCTTTCTTCCTTCCATCGTCGGCGTTAAATTTCATCGGAATGGCTTTCCTATTCCTTCTTTCAGGTACAAGAACACCAAAGGATTGGAATTGAGGCAAAGATCTTTTTCTATAACAGCATCAAATTCCTCAGATGGGAATTCCACCAAGGAGAAAAATGATGGAAGTAAAGTAACTGGTGATGCCCAAGGTCCTCCATTTCTTACCATTTTGGCTGGATTTTTTGTCTTTTCCCTCGTCCTTTGGATAGTCAGTTCCTCTGTCACAACCCTTATAGCTCTAGTCGTCAAGTTGATCTCAACAAAGTAA
Coding sequence (CDS)
ATGGCTTCCGTCTTCGCCGCGCCGCCGTCTCAAGTGGATCTCTCTTCTCACCGCCCAAGTTTGGATCACAAAGCCTTTCTTCCTTCCATCGTCGGCGTTAAATTTCATCGGAATGGCTTTCCTATTCCTTCTTTCAGGTACAAGAACACCAAAGGATTGGAATTGAGGCAAAGATCTTTTTCTATAACAGCATCAAATTCCTCAGATGGGAATTCCACCAAGGAGAAAAATGATGGAAGTAAAGTAACTGGTGATGCCCAAGGTCCTCCATTTCTTACCATTTTGGCTGGATTTTTTGTCTTTTCCCTCGTCCTTTGGATAGTCAGTTCCTCTGTCACAACCCTTATAGCTCTAGTCGTCAAGTTGATCTCAACAAAGTAA
Protein sequence
MASVFAAPPSQVDLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFRYKNTKGLELRQRSFSITASNSSDGNSTKEKNDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVVKLISTK
Homology
BLAST of Csor.00g004550 vs. NCBI nr
Match:
KAG6593336.1 (hypothetical protein SDJN03_12812, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 238 bits (607), Expect = 7.71e-79
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
Query: 1 MASVFAAPPSQVDLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFRYKNTKGLELRQRSF 60
MASVFAAPPSQVDLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFRYKNTKGLELRQRSF
Sbjct: 1 MASVFAAPPSQVDLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFRYKNTKGLELRQRSF 60
Query: 61 SITASNSSDGNSTKEKNDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVV 120
SITASNSSDGNSTKEKNDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVV
Sbjct: 61 SITASNSSDGNSTKEKNDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVV 120
Query: 121 KLISTK 126
KLISTK
Sbjct: 121 KLISTK 126
BLAST of Csor.00g004550 vs. NCBI nr
Match:
KAG7025683.1 (hypothetical protein SDJN02_12181 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 236 bits (601), Expect = 6.34e-78
Identity = 125/126 (99.21%), Postives = 125/126 (99.21%), Query Frame = 0
Query: 1 MASVFAAPPSQVDLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFRYKNTKGLELRQRSF 60
MASVFAAPPSQVDLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFRYKNTKGLELRQRSF
Sbjct: 1 MASVFAAPPSQVDLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFRYKNTKGLELRQRSF 60
Query: 61 SITASNSSDGNSTKEKNDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVV 120
SITASNSSDGNSTKEKNDGSKVT DAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVV
Sbjct: 61 SITASNSSDGNSTKEKNDGSKVTSDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVV 120
Query: 121 KLISTK 126
KLISTK
Sbjct: 121 KLISTK 126
BLAST of Csor.00g004550 vs. NCBI nr
Match:
XP_022959607.1 (uncharacterized protein LOC111460632 [Cucurbita moschata])
HSP 1 Score: 230 bits (587), Expect = 8.66e-76
Identity = 122/126 (96.83%), Postives = 124/126 (98.41%), Query Frame = 0
Query: 1 MASVFAAPPSQVDLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFRYKNTKGLELRQRSF 60
MASVFAAPPSQ+ LSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFRYKNTKGL+LRQRSF
Sbjct: 1 MASVFAAPPSQLVLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFRYKNTKGLKLRQRSF 60
Query: 61 SITASNSSDGNSTKEKNDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVV 120
SITASNSSDGNSTKEKNDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIAL V
Sbjct: 61 SITASNSSDGNSTKEKNDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALAV 120
Query: 121 KLISTK 126
KLISTK
Sbjct: 121 KLISTK 126
BLAST of Csor.00g004550 vs. NCBI nr
Match:
XP_023004845.1 (uncharacterized protein LOC111498025 [Cucurbita maxima])
HSP 1 Score: 230 bits (587), Expect = 8.66e-76
Identity = 122/126 (96.83%), Postives = 125/126 (99.21%), Query Frame = 0
Query: 1 MASVFAAPPSQVDLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFRYKNTKGLELRQRSF 60
MASVFAAPPSQ+ LSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFRYKNTKGL+LRQRSF
Sbjct: 1 MASVFAAPPSQLVLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFRYKNTKGLKLRQRSF 60
Query: 61 SITASNSSDGNSTKEKNDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVV 120
SITASNSSDGNSTKE+NDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVV
Sbjct: 61 SITASNSSDGNSTKEENDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVV 120
Query: 121 KLISTK 126
KLISTK
Sbjct: 121 KLISTK 126
BLAST of Csor.00g004550 vs. NCBI nr
Match:
XP_023513743.1 (uncharacterized protein LOC111778262 isoform X3 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 226 bits (577), Expect = 2.90e-74
Identity = 121/126 (96.03%), Postives = 123/126 (97.62%), Query Frame = 0
Query: 1 MASVFAAPPSQVDLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFRYKNTKGLELRQRSF 60
MASVFAAPPSQ+ LSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFRYKNTK L+LRQRSF
Sbjct: 1 MASVFAAPPSQLVLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFRYKNTKRLKLRQRSF 60
Query: 61 SITASNSSDGNSTKEKNDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVV 120
SITASNSSDGNSTKEK DGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVV
Sbjct: 61 SITASNSSDGNSTKEKKDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVV 120
Query: 121 KLISTK 126
KLISTK
Sbjct: 121 KLISTK 126
BLAST of Csor.00g004550 vs. ExPASy TrEMBL
Match:
A0A6J1KVQ7 (uncharacterized protein LOC111498025 OS=Cucurbita maxima OX=3661 GN=LOC111498025 PE=4 SV=1)
HSP 1 Score: 230 bits (587), Expect = 4.19e-76
Identity = 122/126 (96.83%), Postives = 125/126 (99.21%), Query Frame = 0
Query: 1 MASVFAAPPSQVDLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFRYKNTKGLELRQRSF 60
MASVFAAPPSQ+ LSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFRYKNTKGL+LRQRSF
Sbjct: 1 MASVFAAPPSQLVLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFRYKNTKGLKLRQRSF 60
Query: 61 SITASNSSDGNSTKEKNDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVV 120
SITASNSSDGNSTKE+NDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVV
Sbjct: 61 SITASNSSDGNSTKEENDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVV 120
Query: 121 KLISTK 126
KLISTK
Sbjct: 121 KLISTK 126
BLAST of Csor.00g004550 vs. ExPASy TrEMBL
Match:
A0A6J1H506 (uncharacterized protein LOC111460632 OS=Cucurbita moschata OX=3662 GN=LOC111460632 PE=4 SV=1)
HSP 1 Score: 230 bits (587), Expect = 4.19e-76
Identity = 122/126 (96.83%), Postives = 124/126 (98.41%), Query Frame = 0
Query: 1 MASVFAAPPSQVDLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFRYKNTKGLELRQRSF 60
MASVFAAPPSQ+ LSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFRYKNTKGL+LRQRSF
Sbjct: 1 MASVFAAPPSQLVLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFRYKNTKGLKLRQRSF 60
Query: 61 SITASNSSDGNSTKEKNDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVV 120
SITASNSSDGNSTKEKNDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIAL V
Sbjct: 61 SITASNSSDGNSTKEKNDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALAV 120
Query: 121 KLISTK 126
KLISTK
Sbjct: 121 KLISTK 126
BLAST of Csor.00g004550 vs. ExPASy TrEMBL
Match:
A0A6J1GPL5 (uncharacterized protein LOC111455984 OS=Cucurbita moschata OX=3662 GN=LOC111455984 PE=4 SV=1)
HSP 1 Score: 173 bits (439), Expect = 1.52e-53
Identity = 94/127 (74.02%), Postives = 111/127 (87.40%), Query Frame = 0
Query: 1 MASVFAAPPSQVDLSSHRPSLDHKAFLPS-IVGVKFHRNGFPIPSFRYKNTKGLELRQRS 60
MAS+F+APPS+++L+S RPSL H A LPS I G+++H N FPIPSFRY+NTKGLELRQRS
Sbjct: 1 MASIFSAPPSRLNLTS-RPSLIHGAVLPSSIAGIQYHSNAFPIPSFRYRNTKGLELRQRS 60
Query: 61 FSITASNSSDGNSTKEKNDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALV 120
FSITASNSSDGNS KE+N SK + DAQGPPFLTILAG FVFSL+LW++SS+ T+LI LV
Sbjct: 61 FSITASNSSDGNSIKEENGSSKASSDAQGPPFLTILAGIFVFSLLLWMLSSAATSLIGLV 120
Query: 121 VKLISTK 126
VKLISTK
Sbjct: 121 VKLISTK 126
BLAST of Csor.00g004550 vs. ExPASy TrEMBL
Match:
A0A6J1CV15 (uncharacterized protein LOC111015032 OS=Momordica charantia OX=3673 GN=LOC111015032 PE=4 SV=1)
HSP 1 Score: 168 bits (425), Expect = 1.76e-51
Identity = 89/126 (70.63%), Postives = 106/126 (84.13%), Query Frame = 0
Query: 1 MASVFAAPPSQVDLSSHRPSLDHKAFLPSIVGVKFHRNGFPIPSFRYKNTKGLELRQRSF 60
MAS+FAAPPSQ++L S R S + +A LPSIVGVK H +GFP+PSFR+++TKGLEL QRSF
Sbjct: 1 MASIFAAPPSQLNLCSRRSSSNRRALLPSIVGVKLHSSGFPVPSFRFRHTKGLELSQRSF 60
Query: 61 SITASNSSDGNSTKEKNDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALVV 120
SITASNSSDGNS KE+ TGDAQGPPFLTILAGFFVFSL++W++SS+ T+LI LVV
Sbjct: 61 SITASNSSDGNSIKEE-----ATGDAQGPPFLTILAGFFVFSLIIWMISSAFTSLIGLVV 120
Query: 121 KLISTK 126
KLI K
Sbjct: 121 KLIPAK 121
BLAST of Csor.00g004550 vs. ExPASy TrEMBL
Match:
A0A6J1JUC2 (uncharacterized protein LOC111488436 OS=Cucurbita maxima OX=3661 GN=LOC111488436 PE=4 SV=1)
HSP 1 Score: 166 bits (420), Expect = 1.15e-50
Identity = 91/126 (72.22%), Postives = 108/126 (85.71%), Query Frame = 0
Query: 1 MASVFAAPPSQVDLSSHRPSLDHKAFLPS-IVGVKFHRNGFPIPSFRYKNTKGLELRQRS 60
MAS+FAAPPS+++L+S RPSL H A LPS I G+++H N FPIPSFRY+NTKGLEL RS
Sbjct: 1 MASIFAAPPSRLNLTS-RPSLIHGAVLPSSIAGIQYHSNAFPIPSFRYRNTKGLELSPRS 60
Query: 61 FSITASNSSDGNSTKEKNDGSKVTGDAQGPPFLTILAGFFVFSLVLWIVSSSVTTLIALV 120
FSITASNSSDGNS +E+N SK + DAQGPPFLTILAG FVFSL+LW++SS+ T+LI LV
Sbjct: 61 FSITASNSSDGNSIEEENGSSKASSDAQGPPFLTILAGIFVFSLLLWMLSSAATSLIGLV 120
Query: 121 VKLIST 125
VKLIST
Sbjct: 121 VKLIST 125
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KAG6593336.1 | 7.71e-79 | 100.00 | hypothetical protein SDJN03_12812, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| KAG7025683.1 | 6.34e-78 | 99.21 | hypothetical protein SDJN02_12181 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
| XP_022959607.1 | 8.66e-76 | 96.83 | uncharacterized protein LOC111460632 [Cucurbita moschata] | [more] |
| XP_023004845.1 | 8.66e-76 | 96.83 | uncharacterized protein LOC111498025 [Cucurbita maxima] | [more] |
| XP_023513743.1 | 2.90e-74 | 96.03 | uncharacterized protein LOC111778262 isoform X3 [Cucurbita pepo subsp. pepo] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1KVQ7 | 4.19e-76 | 96.83 | uncharacterized protein LOC111498025 OS=Cucurbita maxima OX=3661 GN=LOC111498025... | [more] |
| A0A6J1H506 | 4.19e-76 | 96.83 | uncharacterized protein LOC111460632 OS=Cucurbita moschata OX=3662 GN=LOC1114606... | [more] |
| A0A6J1GPL5 | 1.52e-53 | 74.02 | uncharacterized protein LOC111455984 OS=Cucurbita moschata OX=3662 GN=LOC1114559... | [more] |
| A0A6J1CV15 | 1.76e-51 | 70.63 | uncharacterized protein LOC111015032 OS=Momordica charantia OX=3673 GN=LOC111015... | [more] |
| A0A6J1JUC2 | 1.15e-50 | 72.22 | uncharacterized protein LOC111488436 OS=Cucurbita maxima OX=3661 GN=LOC111488436... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
