Csor.00g002110 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g002110
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	AAI domain-containing protein
Location	Csor_Chr17: 10230673 .. 10230978 (-)
RNA-Seq Expression	Csor.00g002110
Synteny	Csor.00g002110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCATAACTGCTCTAAAGGTGGTCGTGATGGTGATGGTGGTGAGCTTAGCGGAGATGGCGATGGCGGTGGACGTGTGTGGTGTCAACAAGGACGGTCTCAAAGCGTGCAAGCCATGGGTGATGAAACCGTGCCCAACCGAGCTACCGCCCGCCGCCTGTTGCGACGGGCTCTCGAAGGCGGACTTGGGTTGCTTTTGCAAGTATAAACACTCCATGTTGCTGTCCTCACTTGGGATTGATCTTCATCTTGCTCTTGCTTTGCCAGCCAAGTGCAGCCTTCCCAACACTCCCTCTTGTTCTTAA

mRNA sequence

ATGGCCATAACTGCTCTAAAGGTGGTCGTGATGGTGATGGTGGTGAGCTTAGCGGAGATGGCGATGGCGGTGGACGTGTGTGGTGTCAACAAGGACGGTCTCAAAGCGTGCAAGCCATGGGTGATGAAACCGTGCCCAACCGAGCTACCGCCCGCCGCCTGTTGCGACGGGCTCTCGAAGGCGGACTTGGGTTGCTTTTGCAAGTATAAACACTCCATGTTGCTGTCCTCACTTGGGATTGATCTTCATCTTGCTCTTGCTTTGCCAGCCAAGTGCAGCCTTCCCAACACTCCCTCTTGTTCTTAA

Coding sequence (CDS)

ATGGCCATAACTGCTCTAAAGGTGGTCGTGATGGTGATGGTGGTGAGCTTAGCGGAGATGGCGATGGCGGTGGACGTGTGTGGTGTCAACAAGGACGGTCTCAAAGCGTGCAAGCCATGGGTGATGAAACCGTGCCCAACCGAGCTACCGCCCGCCGCCTGTTGCGACGGGCTCTCGAAGGCGGACTTGGGTTGCTTTTGCAAGTATAAACACTCCATGTTGCTGTCCTCACTTGGGATTGATCTTCATCTTGCTCTTGCTTTGCCAGCCAAGTGCAGCCTTCCCAACACTCCCTCTTGTTCTTAA

Protein sequence

MAITALKVVVMVMVVSLAEMAMAVDVCGVNKDGLKACKPWVMKPCPTELPPAACCDGLSKADLGCFCKYKHSMLLSSLGIDLHLALALPAKCSLPNTPSCS

Homology

[Close]

BLAST of Csor.00g002110 vs. ExPASy Swiss-Prot
Match: Q8W453 (Putative lipid-transfer protein DIR1 OS=Arabidopsis thaliana OX=3702 GN=DIR1 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.7e-14
Identity = 45/103 (43.69%), Postives = 61/103 (59.22%), Query Frame = 0


Query: 1   MAITALKVVVMVMVVSLA---EMAMAVDVCGVNKDGLKACKPWVMKPCPTELPPAACCDG 60
           MA     +V+M M+V +A   + ++A+D+CG+++D L  CKP V K  PT  P   CC  
Sbjct: 1   MASKKAAMVMMAMIVIMAMLVDTSVAIDLCGMSQDELNECKPAVSKENPTS-PSQPCCTA 60

Query: 61  LSKADLGCFCKYKHSMLLSSLGIDLHLALALPAKCSLPNTPSC 101
           L  AD  C C YK+S  L S G+D  LA ALP +C L N P+C
Sbjct: 61  LQHADFACLCGYKNSPWLGSFGVDPELASALPKQCGLANAPTC 102

[Close]

BLAST of Csor.00g002110 vs. NCBI nr
Match: KAG6576032.1 (putative lipid-transfer protein DIR1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 201 bits (510), Expect = 7.66e-65
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   MAITALKVVVMVMVVSLAEMAMAVDVCGVNKDGLKACKPWVMKPCPTELPPAACCDGLSK 60
           MAITALKVVVMVMVVSLAEMAMAVDVCGVNKDGLKACKPWVMKPCPTELPPAACCDGLSK
Sbjct: 1   MAITALKVVVMVMVVSLAEMAMAVDVCGVNKDGLKACKPWVMKPCPTELPPAACCDGLSK 60

Query: 61  ADLGCFCKYKHSMLLSSLGIDLHLALALPAKCSLPNTPSCS 101
           ADLGCFCKYKHSMLLSSLGIDLHLALALPAKCSLPNTPSCS
Sbjct: 61  ADLGCFCKYKHSMLLSSLGIDLHLALALPAKCSLPNTPSCS 101

[Close]

BLAST of Csor.00g002110 vs. NCBI nr
Match: KAG7014553.1 (putative lipid-transfer protein DIR1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 192 bits (487), Expect = 2.47e-61
Identity = 97/101 (96.04%), Postives = 98/101 (97.03%), Query Frame = 0


Query: 1   MAITALKVVVMVMVVSLAEMAMAVDVCGVNKDGLKACKPWVMKPCPTELPPAACCDGLSK 60
           MAITALKVVVMVMVVSLAEMAM V VCGVNKDGLKAC+PWVMKPCPTELPPAACCDGLSK
Sbjct: 1   MAITALKVVVMVMVVSLAEMAMVVGVCGVNKDGLKACRPWVMKPCPTELPPAACCDGLSK 60

Query: 61  ADLGCFCKYKHSMLLSSLGIDLHLALALPAKCSLPNTPSCS 101
           ADLGCFCKYKHSMLLSSLGIDL LALALPAKCSLPNTPSCS
Sbjct: 61  ADLGCFCKYKHSMLLSSLGIDLDLALALPAKCSLPNTPSCS 101

[Close]

BLAST of Csor.00g002110 vs. NCBI nr
Match: XP_022953887.1 (putative lipid-transfer protein DIR1 [Cucurbita moschata])

HSP 1 Score: 191 bits (486), Expect = 3.52e-61
Identity = 97/101 (96.04%), Postives = 97/101 (96.04%), Query Frame = 0


Query: 1   MAITALKVVVMVMVVSLAEMAMAVDVCGVNKDGLKACKPWVMKPCPTELPPAACCDGLSK 60
           MAITA KVVVMVMVVSLAEMAMAVDVCGVNKDGLKACKPWVMKPCPTELPP ACCDGLSK
Sbjct: 1   MAITAPKVVVMVMVVSLAEMAMAVDVCGVNKDGLKACKPWVMKPCPTELPPTACCDGLSK 60

Query: 61  ADLGCFCKYKHSMLLSSLGIDLHLALALPAKCSLPNTPSCS 101
           ADLGCFCKYKHSMLLSSLGIDL LAL LPAKCSLPNTPSCS
Sbjct: 61  ADLGCFCKYKHSMLLSSLGIDLDLALGLPAKCSLPNTPSCS 101

[Close]

BLAST of Csor.00g002110 vs. NCBI nr
Match: XP_022991757.1 (putative lipid-transfer protein DIR1 [Cucurbita maxima])

HSP 1 Score: 187 bits (474), Expect = 2.38e-59
Identity = 95/101 (94.06%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   MAITALKVVVMVMVVSLAEMAMAVDVCGVNKDGLKACKPWVMKPCPTELPPAACCDGLSK 60
           MAI A KV V+VMVVSLAEMAMAVDVCGVNKD LKACKPWVMKPCPTELPPAACCDGLSK
Sbjct: 1   MAIIASKVAVIVMVVSLAEMAMAVDVCGVNKDDLKACKPWVMKPCPTELPPAACCDGLSK 60

Query: 61  ADLGCFCKYKHSMLLSSLGIDLHLALALPAKCSLPNTPSCS 101
           ADLGCFCKYKHSMLLSSLGIDL LALALPAKCSLPNTPSCS
Sbjct: 61  ADLGCFCKYKHSMLLSSLGIDLDLALALPAKCSLPNTPSCS 101

[Close]

BLAST of Csor.00g002110 vs. NCBI nr
Match: KAG6593049.1 (putative lipid-transfer protein DIR1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 149 bits (376), Expect = 1.92e-44
Identity = 70/90 (77.78%), Postives = 78/90 (86.67%), Query Frame = 0


Query: 11  MVMVVSLAEMAMAVDVCGVNKDGLKACKPWVMKPCPTELPPAACCDGLSKADLGCFCKYK 70
           MVM+VSL+     +DVCGV++DGL ACKPWV KPCPTELPPAACCDGLSKAD GCFC YK
Sbjct: 9   MVMLVSLSGALAEMDVCGVSQDGLTACKPWVTKPCPTELPPAACCDGLSKADFGCFCNYK 68

Query: 71  HSMLLSSLGIDLHLALALPAKCSLPNTPSC 100
           HS++L SLGID  LALALPAKCSLPN+PSC
Sbjct: 69  HSLVLPSLGIDPDLALALPAKCSLPNSPSC 98

[Close]

BLAST of Csor.00g002110 vs. ExPASy TrEMBL
Match: A0A6J1GPI5 (putative lipid-transfer protein DIR1 OS=Cucurbita moschata OX=3662 GN=LOC111456291 PE=4 SV=1)

HSP 1 Score: 191 bits (486), Expect = 1.70e-61
Identity = 97/101 (96.04%), Postives = 97/101 (96.04%), Query Frame = 0


Query: 1   MAITALKVVVMVMVVSLAEMAMAVDVCGVNKDGLKACKPWVMKPCPTELPPAACCDGLSK 60
           MAITA KVVVMVMVVSLAEMAMAVDVCGVNKDGLKACKPWVMKPCPTELPP ACCDGLSK
Sbjct: 1   MAITAPKVVVMVMVVSLAEMAMAVDVCGVNKDGLKACKPWVMKPCPTELPPTACCDGLSK 60

Query: 61  ADLGCFCKYKHSMLLSSLGIDLHLALALPAKCSLPNTPSCS 101
           ADLGCFCKYKHSMLLSSLGIDL LAL LPAKCSLPNTPSCS
Sbjct: 61  ADLGCFCKYKHSMLLSSLGIDLDLALGLPAKCSLPNTPSCS 101

[Close]

BLAST of Csor.00g002110 vs. ExPASy TrEMBL
Match: A0A6J1JMR4 (putative lipid-transfer protein DIR1 OS=Cucurbita maxima OX=3661 GN=LOC111488290 PE=4 SV=1)

HSP 1 Score: 187 bits (474), Expect = 1.15e-59
Identity = 95/101 (94.06%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   MAITALKVVVMVMVVSLAEMAMAVDVCGVNKDGLKACKPWVMKPCPTELPPAACCDGLSK 60
           MAI A KV V+VMVVSLAEMAMAVDVCGVNKD LKACKPWVMKPCPTELPPAACCDGLSK
Sbjct: 1   MAIIASKVAVIVMVVSLAEMAMAVDVCGVNKDDLKACKPWVMKPCPTELPPAACCDGLSK 60

Query: 61  ADLGCFCKYKHSMLLSSLGIDLHLALALPAKCSLPNTPSCS 101
           ADLGCFCKYKHSMLLSSLGIDL LALALPAKCSLPNTPSCS
Sbjct: 61  ADLGCFCKYKHSMLLSSLGIDLDLALALPAKCSLPNTPSCS 101

[Close]

BLAST of Csor.00g002110 vs. ExPASy TrEMBL
Match: A0A0A0K4Q7 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G372360 PE=4 SV=1)

HSP 1 Score: 137 bits (344), Expect = 8.13e-40
Identity = 63/94 (67.02%), Postives = 81/94 (86.17%), Query Frame = 0


Query: 8   VVVMVMVVSLAEMAMAVDVCGVNKDGLKACKPWVMKPCPTELPPAACCDGLSKADLGCFC 67
           V+V++++V LA +++A++VCGV++DGL ACKPWV KPCP E+PPAACC+ LS AD  CFC
Sbjct: 9   VMVVLILVGLAGISIAMEVCGVDEDGLTACKPWVTKPCPAEMPPAACCNKLSNADFDCFC 68

Query: 68  KYKHSMLLSSLGIDLHLALALPAKCSLPNTPSCS 101
           KYK+SMLLSS GID  LALALP KC++PNTP+CS
Sbjct: 69  KYKNSMLLSSFGIDSDLALALPVKCNIPNTPTCS 102

[Close]

BLAST of Csor.00g002110 vs. ExPASy TrEMBL
Match: A0A5D3D158 (Putative lipid-transfer protein DIR1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002300 PE=4 SV=1)

HSP 1 Score: 132 bits (332), Expect = 5.48e-38
Identity = 59/95 (62.11%), Postives = 80/95 (84.21%), Query Frame = 0


Query: 7   KVVVMVMVVSLAEMAMAVDVCGVNKDGLKACKPWVMKPCPTELPPAACCDGLSKADLGCF 66
           K++ +V++V +A +++A+++CGV+++GL ACKPWV KPCPTE+PPA CC+ LS AD  CF
Sbjct: 8   KIMAVVILVGIAGISIAMEMCGVDEEGLTACKPWVTKPCPTEMPPATCCNKLSNADFSCF 67

Query: 67  CKYKHSMLLSSLGIDLHLALALPAKCSLPNTPSCS 101
           CKYK+SMLLSS GID  LALALP KC++ NTP+CS
Sbjct: 68  CKYKNSMLLSSFGIDPDLALALPVKCNITNTPTCS 102

[Close]

BLAST of Csor.00g002110 vs. ExPASy TrEMBL
Match: A0A6J1DS99 (putative lipid-transfer protein DIR1 OS=Momordica charantia OX=3673 GN=LOC111023061 PE=4 SV=1)

HSP 1 Score: 132 bits (331), Expect = 7.78e-38
Identity = 60/86 (69.77%), Postives = 73/86 (84.88%), Query Frame = 0


Query: 15  VSLAEMAMAVDVCGVNKDGLKACKPWVMKPCPTELPPAACCDGLSKADLGCFCKYKHSML 74
           VSLA ++ AV+VCGV++DGL ACKPWV KPCPT+ PP ACC+GLSKAD GCFC YK+S++
Sbjct: 18  VSLAGISGAVNVCGVDEDGLTACKPWVTKPCPTDPPPVACCNGLSKADFGCFCNYKNSLV 77

Query: 75  LSSLGIDLHLALALPAKCSLPNTPSC 100
           L SLGI+ +LALALPAKC LP+ P C
Sbjct: 78  LPSLGIEPNLALALPAKCGLPSAPPC 103

[Close]

BLAST of Csor.00g002110 vs. TAIR 10
Match: AT5G48485.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 79.3 bits (194), Expect = 1.9e-15
Identity = 45/103 (43.69%), Postives = 61/103 (59.22%), Query Frame = 0


Query: 1   MAITALKVVVMVMVVSLA---EMAMAVDVCGVNKDGLKACKPWVMKPCPTELPPAACCDG 60
           MA     +V+M M+V +A   + ++A+D+CG+++D L  CKP V K  PT  P   CC  
Sbjct: 1   MASKKAAMVMMAMIVIMAMLVDTSVAIDLCGMSQDELNECKPAVSKENPTS-PSQPCCTA 60

Query: 61  LSKADLGCFCKYKHSMLLSSLGIDLHLALALPAKCSLPNTPSC 101
           L  AD  C C YK+S  L S G+D  LA ALP +C L N P+C
Sbjct: 61  LQHADFACLCGYKNSPWLGSFGVDPELASALPKQCGLANAPTC 102

[Close]

BLAST of Csor.00g002110 vs. TAIR 10
Match: AT5G48490.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 77.8 bits (190), Expect = 5.6e-15
Identity = 42/96 (43.75%), Postives = 57/96 (59.38%), Query Frame = 0


Query: 5   ALKVVVMVMVVSLAEMAMAVDVCGVNKDGLKACKPWVMKPCPTELPPAACCDGLSKADLG 64
           A+ V+VMVM   + E ++A+D+CG+ +  L  C P V K  PT  P   CC+ L  AD  
Sbjct: 7   AIMVIVMVMASLVVERSVAIDLCGMTQAELNECLPAVSKNNPTS-PSLLCCNALKHADYT 66

Query: 65  CFCKYKHSMLLSSLGIDLHLALALPAKCSLPNTPSC 101
           C C YK+S  L S G+D  LA +LP +C L N P+C
Sbjct: 67  CLCGYKNSPWLGSFGVDPKLASSLPKECDLTNAPTC 101

The following BLAST results are available for this feature:

BLAST of Csor.00g002110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W453	2.7e-14	43.69	Putative lipid-transfer protein DIR1 OS=Arabidopsis thaliana OX=3702 GN=DIR1 PE=...	[more]

BLAST of Csor.00g002110 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6576032.1	7.66e-65	100.00	putative lipid-transfer protein DIR1, partial [Cucurbita argyrosperma subsp. sor...	[more]
KAG7014553.1	2.47e-61	96.04	putative lipid-transfer protein DIR1, partial [Cucurbita argyrosperma subsp. arg...	[more]
XP_022953887.1	3.52e-61	96.04	putative lipid-transfer protein DIR1 [Cucurbita moschata]	[more]
XP_022991757.1	2.38e-59	94.06	putative lipid-transfer protein DIR1 [Cucurbita maxima]	[more]
KAG6593049.1	1.92e-44	77.78	putative lipid-transfer protein DIR1, partial [Cucurbita argyrosperma subsp. sor...	[more]

BLAST of Csor.00g002110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GPI5	1.70e-61	96.04	putative lipid-transfer protein DIR1 OS=Cucurbita moschata OX=3662 GN=LOC1114562...	[more]
A0A6J1JMR4	1.15e-59	94.06	putative lipid-transfer protein DIR1 OS=Cucurbita maxima OX=3661 GN=LOC111488290...	[more]
A0A0A0K4Q7	8.13e-40	67.02	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G372360 PE=4 SV...	[more]
A0A5D3D158	5.48e-38	62.11	Putative lipid-transfer protein DIR1 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A6J1DS99	7.78e-38	69.77	putative lipid-transfer protein DIR1 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]

BLAST of Csor.00g002110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48485.1	1.9e-15	43.69	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G48490.1	5.6e-15	43.75	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 37..100 e-value: 3.2E-5 score: 33.3
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 9..100 e-value: 1.6E-8 score: 34.6
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 23..100 e-value: 1.1E-17 score: 65.7
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 27..100
None	No IPR available	PANTHER	PTHR33122:SF63	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 3..100
IPR039265	Putative lipid-transfer protein DIR1-like	PANTHER	PTHR33122	LIPID BINDING PROTEIN-RELATED	coord: 3..100
IPR044741	Non-specific lipid-transfer protein-like	CDD	cd04660	nsLTP_like	coord: 27..99 e-value: 5.83811E-15 score: 62.0014

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g002110.m01	Csor.00g002110.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009627	systemic acquired resistance
molecular_function	GO:0005504	fatty acid binding