CsaV3_7G032280 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_7G032280
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Unknown protein
Location	chr7: 20435213 .. 20435682 (+)
RNA-Seq Expression	CsaV3_7G032280
Synteny	CsaV3_7G032280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCGTAGCACATTAAAACCTTGAAATAACGGAATAAGGGGAAAGTTTCGAAGCTTCCACAGCGGTGGTTGAACTCGCCAAAGTTGGAAATCCACTGTACAGAGAAGAAAGTAAAAATAAATTTGAGCAATTCGGATCCTTACCGGACCCGACCCGCCGTAGTTCTCAGGTCGACGGCGTTCATCCTTCTCGGATCACAGCTTCAGAATCGTCCAGCATCTATCGGCAATTGGCAACTACGCCCGAGATCTCACCTTCTTCATCAATGTTCTGTAATTCCCCTCAATTCCCTCTCTTTTCTCTACTTTAACTCTTCTCCAGGGTTTATTTTTCTGTTGTCATTTTCTATCCGGGAATTACTTTGAACTCCCTTTCGCATATAATTGCGTTCCGGGAAGGGGAAAGTTGACGAACGAGATGAATGGGGTTTGTTTCCGAGTTTATAATTTGGGTAATTCGAGGATTTGA

mRNA sequence

ATGGGCGGGAAAGTTTCGAAGCTTCCACAGCGGTGGTTGAACTCGCCAAAGTTGGAAATCCACTGTACAGAGAAGAAAGTAAAAATAAATTTGAGCAATTCGGATCCTTACCGGACCCGACCCGCCGTAGTTCTCAGGTCGACGGCGTTCATCCTTCTCGGATCACAGCTTCAGAATCGTCCAGCATCTATCGGCAATTGGCAACTACGCCCGAGATCTCACCTTCTTCATCAATGTTCTGGTTTATTTTTCTGTTGTCATTTTCTATCCGGGAATTACTTTGAACTCCCTTTCGCATATAATTGCGTTCCGGGAAGGGGAAAGTTGACGAACGAGATGAATGGGGTTTGTTTCCGAGTTTATAATTTGGGTAATTCGAGGATTTGA

Coding sequence (CDS)

ATGGGCGGGAAAGTTTCGAAGCTTCCACAGCGGTGGTTGAACTCGCCAAAGTTGGAAATCCACTGTACAGAGAAGAAAGTAAAAATAAATTTGAGCAATTCGGATCCTTACCGGACCCGACCCGCCGTAGTTCTCAGGTCGACGGCGTTCATCCTTCTCGGATCACAGCTTCAGAATCGTCCAGCATCTATCGGCAATTGGCAACTACGCCCGAGATCTCACCTTCTTCATCAATGTTCTGGTTTATTTTTCTGTTGTCATTTTCTATCCGGGAATTACTTTGAACTCCCTTTCGCATATAATTGCGTTCCGGGAAGGGGAAAGTTGACGAACGAGATGAATGGGGTTTGTTTCCGAGTTTATAATTTGGGTAATTCGAGGATTTGA

Protein sequence

MGGKVSKLPQRWLNSPKLEIHCTEKKVKINLSNSDPYRTRPAVVLRSTAFILLGSQLQNRPASIGNWQLRPRSHLLHQCSGLFFCCHFLSGNYFELPFAYNCVPGRGKLTNEMNGVCFRVYNLGNSRI*

Homology

[Close]

BLAST of CsaV3_7G032280 vs. NCBI nr
Match: KGN45258.1 (hypothetical protein Csa_016845 [Cucumis sativus])

HSP 1 Score: 276.6 bits (706), Expect = 1.1e-70
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MGGKVSKLPQRWLNSPKLEIHCTEKKVKINLSNSDPYRTRPAVVLRSTAFILLGSQLQNR 60
           MGGKVSKLPQRWLNSPKLEIHCTEKKVKINLSNSDPYRTRPAVVLRSTAFILLGSQLQNR
Sbjct: 1   MGGKVSKLPQRWLNSPKLEIHCTEKKVKINLSNSDPYRTRPAVVLRSTAFILLGSQLQNR 60

Query: 61  PASIGNWQLRPRSHLLHQCSGLFFCCHFLSGNYFELPFAYNCVPGRGKLTNEMNGVCFRV 120
           PASIGNWQLRPRSHLLHQCSGLFFCCHFLSGNYFELPFAYNCVPGRGKLTNEMNGVCFRV
Sbjct: 61  PASIGNWQLRPRSHLLHQCSGLFFCCHFLSGNYFELPFAYNCVPGRGKLTNEMNGVCFRV 120

Query: 121 YNLGNSRI 129
           YNLGNSRI
Sbjct: 121 YNLGNSRI 128

[Close]

BLAST of CsaV3_7G032280 vs. ExPASy TrEMBL
Match: A0A0A0K6X3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432400 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 5.4e-71
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MGGKVSKLPQRWLNSPKLEIHCTEKKVKINLSNSDPYRTRPAVVLRSTAFILLGSQLQNR 60
           MGGKVSKLPQRWLNSPKLEIHCTEKKVKINLSNSDPYRTRPAVVLRSTAFILLGSQLQNR
Sbjct: 1   MGGKVSKLPQRWLNSPKLEIHCTEKKVKINLSNSDPYRTRPAVVLRSTAFILLGSQLQNR 60

Query: 61  PASIGNWQLRPRSHLLHQCSGLFFCCHFLSGNYFELPFAYNCVPGRGKLTNEMNGVCFRV 120
           PASIGNWQLRPRSHLLHQCSGLFFCCHFLSGNYFELPFAYNCVPGRGKLTNEMNGVCFRV
Sbjct: 61  PASIGNWQLRPRSHLLHQCSGLFFCCHFLSGNYFELPFAYNCVPGRGKLTNEMNGVCFRV 120

Query: 121 YNLGNSRI 129
           YNLGNSRI
Sbjct: 121 YNLGNSRI 128

The following BLAST results are available for this feature:

BLAST of CsaV3_7G032280 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN45258.1	1.1e-70	100.00	hypothetical protein Csa_016845 [Cucumis sativus]	[more]

BLAST of CsaV3_7G032280 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_7G032280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6X3	5.4e-71	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432400 PE=4 SV=1	[more]

BLAST of CsaV3_7G032280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G032280.1	CsaV3_7G032280.1	mRNA