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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGACACTGGTGGCCCTTCAACATATACAGAGCTTGAGGCAAAAGCTAGTGCGAACCACTTTGACTCCAAACAGGACGACATTAAGTTCAAGTTGGATTGGATGCACTTCAGATTGGACAGCATAGAGTCCTCCTTTATGACCAACTTG mRNA sequence ATGGACACTGGTGGCCCTTCAACATATACAGAGCTTGAGGCAAAAGCTAGTGCGAACCACTTTGACTCCAAACAGGACGACATTAAGTTCAAGTTGGATTGGATGCACTTCAGATTGGACAGCATAGAGTCCTCCTTTATGACCAACTTG Coding sequence (CDS) ATGGACACTGGTGGCCCTTCAACATATACAGAGCTTGAGGCAAAAGCTAGTGCGAACCACTTTGACTCCAAACAGGACGACATTAAGTTCAAGTTGGATTGGATGCACTTCAGATTGGACAGCATAGAGTCCTCCTTTATGACCAACTTG Protein sequence MDTGGPSTYTELEAKASANHFDSKQDDIKFKLDWMHFRLDSIESSFMTNL
Homology
BLAST of CsaV3_7G022100 vs. NCBI nr
Match: KAE8646068.1 (hypothetical protein Csa_015720, partial [Cucumis sativus]) HSP 1 Score: 105.9 bits (263), Expect = 1.0e-19 Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0
Query: 1 MDTGGPSTYTELEAKASANHFDSKQDDIKFKLDWMHFRLDSIESSFMTNL 51
MDTGGPSTYTELEAKASANHFDSKQDDIKFKLDWMHFRLDSIESSFMTNL
Sbjct: 1 MDTGGPSTYTELEAKASANHFDSKQDDIKFKLDWMHFRLDSIESSFMTNL 50
BLAST of CsaV3_7G022100 vs. ExPASy TrEMBL
Match: A0A0A0K798 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G219280 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 4.9e-20 Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0
Query: 1 MDTGGPSTYTELEAKASANHFDSKQDDIKFKLDWMHFRLDSIESSFMTNL 51
MDTGGPSTYTELEAKASANHFDSKQDDIKFKLDWMHFRLDSIESSFMTNL
Sbjct: 1 MDTGGPSTYTELEAKASANHFDSKQDDIKFKLDWMHFRLDSIESSFMTNL 50
BLAST of CsaV3_7G022100 vs. ExPASy TrEMBL
Match: A0A5A7SJV4 (Protein SPIRRIG OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1970G00490 PE=4 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 4.9e-04 Identity = 25/50 (50.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query: 1 MDTGGPSTYTELEAKASANHFDSKQDDIKFKLDWMHFRLDSIESSFMTNL 51
+D GGPST +EL+ +ASA H D + D+I+FKL+ M RLD ++ SF L
Sbjct: 138 LDIGGPSTCSELKVEASAGHLDFRLDNIEFKLNHMDSRLDRVDFSFTVEL 187
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAE8646068.1 | 1.0e-19 | 100.00 | hypothetical protein Csa_015720, partial [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0K798 | 4.9e-20 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G219280 PE=4 SV=1 | [more] |
| A0A5A7SJV4 | 4.9e-04 | 50.00 | Protein SPIRRIG OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1970G004... | [more] |
| Match Name | E-value | Identity | Description | |
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Relationships
The following mRNA feature(s) are a part of this gene:
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