CsaV3_7G003910 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_7G003910
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Geranylgeranyl transferase type-2 subunit beta
Location	chr7: 2889613 .. 2890161 (+)
RNA-Seq Expression	CsaV3_7G003910
Synteny	CsaV3_7G003910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATACTCTCCCACTCACCGACTTCATTATGTTGCTTCCGTTTTGCCACTCACGGTGGGTTCTTTCGAGCTTGATCATGATTGACAGAGGTCACTGGATTAATAAGGAAAGACTCATTAAATTCATCTTAGATTCTCAGGTTGTCAAGCCAAATCTTCTTTATCTAGATTGGATTTATGTATAAGGGGTTAATTATATTGCTTTTAACGAAGGTAACTTCCATGACATAACATAACTATTGACAGTTTCAGGACACAGAAAATGGTGGTATTTCAGGCAGACGGGATGACGCTGTTGATGTCTATCACACATGCTTTGGAATAGCTGGTTATTACCGTCATATACAACTAACTTACGTTAATAACTTAATATCTTAACTAAAGACATATGATTCGTGCTCCTGATGTTTACTTTTATTGATGCAGGCCTTTCACTTCTTGAATATCCAGGACCGAAAGCCATTGATCCAGCTTATGCTTTACCAGTTGACGTTGTGAACAGAATTTTCTTGAGCAAAAAAATAGTATCATCCAAAGCTATCGATTGA

mRNA sequence

ATGCATACTCTCCCACTCACCGACTTCATTATGTTGCTTCCGTTTTGCCACTCACGGTGGGTTCTTTCGAGCTTGATCATGATTGACAGAGGTCACTGGATTAATAAGGAAAGACTCATTAAATTCATCTTAGATTCTCAGTTTCAGGACACAGAAAATGGTGGTATTTCAGGCAGACGGGATGACGCTGTTGATGTCTATCACACATGCTTTGGAATAGCTGGCCTTTCACTTCTTGAATATCCAGGACCGAAAGCCATTGATCCAGCTTATGCTTTACCAGTTGACGTTGTGAACAGAATTTTCTTGAGCAAAAAAATAGTATCATCCAAAGCTATCGATTGA

Coding sequence (CDS)

ATGCATACTCTCCCACTCACCGACTTCATTATGTTGCTTCCGTTTTGCCACTCACGGTGGGTTCTTTCGAGCTTGATCATGATTGACAGAGGTCACTGGATTAATAAGGAAAGACTCATTAAATTCATCTTAGATTCTCAGTTTCAGGACACAGAAAATGGTGGTATTTCAGGCAGACGGGATGACGCTGTTGATGTCTATCACACATGCTTTGGAATAGCTGGCCTTTCACTTCTTGAATATCCAGGACCGAAAGCCATTGATCCAGCTTATGCTTTACCAGTTGACGTTGTGAACAGAATTTTCTTGAGCAAAAAAATAGTATCATCCAAAGCTATCGATTGA

Protein sequence

MHTLPLTDFIMLLPFCHSRWVLSSLIMIDRGHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSKKIVSSKAID*

Homology

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BLAST of CsaV3_7G003910 vs. NCBI nr
Match: KAE8645752.1 (hypothetical protein Csa_020534 [Cucumis sativus])

HSP 1 Score: 237.7 bits (605), Expect = 5.1e-59
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   MHTLPLTDFIMLLPFCHSRWVLSSLIMIDRGHWINKERLIKFILDSQFQDTENGGISGRR 60
           MHTLPLTDFIMLLPFCHSRWVLSSLIMIDRGHWINKERLIKFILDSQFQDTENGGISGRR
Sbjct: 1   MHTLPLTDFIMLLPFCHSRWVLSSLIMIDRGHWINKERLIKFILDSQFQDTENGGISGRR 60

Query: 61  DDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSKKIVSSKAID 115
           DDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSKKIVSSKAID
Sbjct: 61  DDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSKKIVSSKAID 114

[Close]

BLAST of CsaV3_7G003910 vs. NCBI nr
Match: XP_022153059.1 (geranylgeranyl transferase type-2 subunit beta 1-like isoform X1 [Momordica charantia])

HSP 1 Score: 156.8 bits (395), Expect = 1.2e-34
Identity = 78/91 (85.71%), Postives = 81/91 (89.01%), Query Frame = 0


Query: 16  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAG 75
           C+S WVLSSLIMIDR HWINKE+LI+FILD   QDTENGGIS R DDAVDVYHT FGIAG
Sbjct: 233 CYSWWVLSSLIMIDRVHWINKEKLIQFILDC--QDTENGGISDRPDDAVDVYHTYFGIAG 292

Query: 76  LSLLEYPGPKAIDPAYALPVDVVNRIFLSKK 107
           LSLLEYPG KAIDPAYALPVDVVNRIFL KK
Sbjct: 293 LSLLEYPGLKAIDPAYALPVDVVNRIFLGKK 321

[Close]

BLAST of CsaV3_7G003910 vs. NCBI nr
Match: XP_022153066.1 (geranylgeranyl transferase type-2 subunit beta 1-like isoform X2 [Momordica charantia] >XP_022153074.1 geranylgeranyl transferase type-2 subunit beta 1-like isoform X2 [Momordica charantia] >XP_022153082.1 geranylgeranyl transferase type-2 subunit beta 1-like isoform X2 [Momordica charantia])

HSP 1 Score: 156.8 bits (395), Expect = 1.2e-34
Identity = 78/91 (85.71%), Postives = 81/91 (89.01%), Query Frame = 0


Query: 16  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAG 75
           C+S WVLSSLIMIDR HWINKE+LI+FILD   QDTENGGIS R DDAVDVYHT FGIAG
Sbjct: 226 CYSWWVLSSLIMIDRVHWINKEKLIQFILDC--QDTENGGISDRPDDAVDVYHTYFGIAG 285

Query: 76  LSLLEYPGPKAIDPAYALPVDVVNRIFLSKK 107
           LSLLEYPG KAIDPAYALPVDVVNRIFL KK
Sbjct: 286 LSLLEYPGLKAIDPAYALPVDVVNRIFLGKK 314

[Close]

BLAST of CsaV3_7G003910 vs. NCBI nr
Match: XP_038887312.1 (geranylgeranyl transferase type-2 subunit beta 1-like isoform X3 [Benincasa hispida])

HSP 1 Score: 155.6 bits (392), Expect = 2.6e-34
Identity = 78/91 (85.71%), Postives = 80/91 (87.91%), Query Frame = 0


Query: 16  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAG 75
           C+S WVLSSLIMI R HWINKE+LIKFILD   QDTENGGIS R DDAVDVYHT FGIAG
Sbjct: 187 CYSWWVLSSLIMIGRVHWINKEKLIKFILDC--QDTENGGISDRPDDAVDVYHTYFGIAG 246

Query: 76  LSLLEYPGPKAIDPAYALPVDVVNRIFLSKK 107
           LSLLEYPG KAIDPAYALPVDVVNRIFL KK
Sbjct: 247 LSLLEYPGLKAIDPAYALPVDVVNRIFLGKK 275

[Close]

BLAST of CsaV3_7G003910 vs. NCBI nr
Match: XP_038887307.1 (geranylgeranyl transferase type-2 subunit beta 1-like isoform X1 [Benincasa hispida] >XP_038887308.1 geranylgeranyl transferase type-2 subunit beta 1-like isoform X1 [Benincasa hispida] >XP_038887309.1 geranylgeranyl transferase type-2 subunit beta 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 155.6 bits (392), Expect = 2.6e-34
Identity = 78/91 (85.71%), Postives = 80/91 (87.91%), Query Frame = 0


Query: 16  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAG 75
           C+S WVLSSLIMI R HWINKE+LIKFILD   QDTENGGIS R DDAVDVYHT FGIAG
Sbjct: 226 CYSWWVLSSLIMIGRVHWINKEKLIKFILDC--QDTENGGISDRPDDAVDVYHTYFGIAG 285

Query: 76  LSLLEYPGPKAIDPAYALPVDVVNRIFLSKK 107
           LSLLEYPG KAIDPAYALPVDVVNRIFL KK
Sbjct: 286 LSLLEYPGLKAIDPAYALPVDVVNRIFLGKK 314

[Close]

BLAST of CsaV3_7G003910 vs. ExPASy Swiss-Prot
Match: Q84J75 (Geranylgeranyl transferase type-2 subunit beta 1 OS=Arabidopsis thaliana OX=3702 GN=RGTB1 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 2.5e-32
Identity = 67/94 (71.28%), Postives = 77/94 (81.91%), Query Frame = 0


Query: 12  LLPFCHSRWVLSSLIMIDRGHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCF 71
           L   C+S WVLSSLIMIDR HWI+K +L+KFILD   QD +NGGIS R +DAVD++HT F
Sbjct: 230 LADVCYSWWVLSSLIMIDRVHWIDKAKLVKFILDC--QDLDNGGISDRPEDAVDIFHTYF 289

Query: 72  GIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSK 106
           G+AGLSLLEYPG K IDPAYALPVDVVNRI  +K
Sbjct: 290 GVAGLSLLEYPGVKVIDPAYALPVDVVNRIIFTK 321

[Close]

BLAST of CsaV3_7G003910 vs. ExPASy Swiss-Prot
Match: Q9LHL5 (Geranylgeranyl transferase type-2 subunit beta 2 OS=Arabidopsis thaliana OX=3702 GN=RGTB2 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 4.0e-30
Identity = 63/90 (70.00%), Postives = 72/90 (80.00%), Query Frame = 0


Query: 16  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAG 75
           C+S WVLSSLIMIDR HWI K +L+KFILDS  QD +NGGIS R    VD++HT FG+AG
Sbjct: 230 CYSWWVLSSLIMIDRVHWIEKAKLVKFILDS--QDMDNGGISDRPSYTVDIFHTYFGVAG 289

Query: 76  LSLLEYPGPKAIDPAYALPVDVVNRIFLSK 106
           LSLLEYPG K IDPAYALPV V+NRI  +K
Sbjct: 290 LSLLEYPGVKTIDPAYALPVHVINRILFTK 317

[Close]

BLAST of CsaV3_7G003910 vs. ExPASy Swiss-Prot
Match: P46960 (Geranylgeranyl transferase type-2 subunit beta OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ptb1 PE=3 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.6e-18
Identity = 39/88 (44.32%), Postives = 62/88 (70.45%), Query Frame = 0


Query: 16  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAG 75
           C+  W LS L +I +  WI++ +LI F+L +  QD ++GG + R++DA DVYHTCF +AG
Sbjct: 226 CYGWWDLSPLAIIGKLDWIDRNQLIDFLLGT--QDADSGGFADRKEDATDVYHTCFSLAG 285

Query: 76  LSLLEYPGPKAIDPAYALPVDVVNRIFL 104
           LSLL++P  + +DP + LP++V  ++ L
Sbjct: 286 LSLLQFPNIEPVDPRFCLPLEVTQKMKL 311

[Close]

BLAST of CsaV3_7G003910 vs. ExPASy Swiss-Prot
Match: O93830 (Geranylgeranyl transferase type-2 subunit beta OS=Candida albicans OX=5476 GN=BET2 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.0e-17
Identity = 45/87 (51.72%), Postives = 59/87 (67.82%), Query Frame = 0


Query: 16  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAG 75
           C+S WVLSSL ++ R +W++ + L  FIL    QD ENGG S R  +  DVYHTCF IAG
Sbjct: 251 CYSWWVLSSLSILKRKNWVDLKILENFILTC--QDLENGGFSDRPGNQTDVYHTCFAIAG 310

Query: 76  LSLLEYP--GPKAIDPAYALPVDVVNR 101
           LSL++Y   G K IDP Y +PV+V ++
Sbjct: 311 LSLIDYKKYGFKEIDPVYCMPVEVTSK 335

[Close]

BLAST of CsaV3_7G003910 vs. ExPASy Swiss-Prot
Match: P20133 (Geranylgeranyl transferase type-2 subunit beta OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=BET2 PE=1 SV=3)

HSP 1 Score: 90.1 bits (222), Expect = 1.7e-17
Identity = 44/85 (51.76%), Postives = 58/85 (68.24%), Query Frame = 0


Query: 16  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAG 75
           C+S WVLSSL +I R  WIN E+L +FIL  + QD + GGIS R ++ VDV+HT FG+AG
Sbjct: 236 CYSWWVLSSLAIIGRLDWINYEKLTEFIL--KCQDEKKGGISDRPENEVDVFHTVFGVAG 295

Query: 76  LSLLEYPGPKAIDPAYALPVDVVNR 101
           LSL+ Y     IDP Y +P  V ++
Sbjct: 296 LSLMGYDNLVPIDPIYCMPKSVTSK 318

[Close]

BLAST of CsaV3_7G003910 vs. ExPASy TrEMBL
Match: A0A0A0K5L9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044970 PE=3 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.0e-56
Identity = 112/114 (98.25%), Postives = 112/114 (98.25%), Query Frame = 0


Query: 1   MHTLPLTDFIMLLPFCHSRWVLSSLIMIDRGHWINKERLIKFILDSQFQDTENGGISGRR 60
           MHTLPLTDFIMLLPFCHSRWVLSSLIMIDRGHWINKERLIKFILDS  QDTENGGISGRR
Sbjct: 1   MHTLPLTDFIMLLPFCHSRWVLSSLIMIDRGHWINKERLIKFILDS--QDTENGGISGRR 60

Query: 61  DDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSKKIVSSKAID 115
           DDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSKKIVSSKAID
Sbjct: 61  DDAVDVYHTCFGIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSKKIVSSKAID 112

[Close]

BLAST of CsaV3_7G003910 vs. ExPASy TrEMBL
Match: A0A6J1DJK5 (Geranylgeranyl transferase type-2 subunit beta OS=Momordica charantia OX=3673 GN=LOC111020651 PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 5.6e-35
Identity = 78/91 (85.71%), Postives = 81/91 (89.01%), Query Frame = 0


Query: 16  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAG 75
           C+S WVLSSLIMIDR HWINKE+LI+FILD   QDTENGGIS R DDAVDVYHT FGIAG
Sbjct: 226 CYSWWVLSSLIMIDRVHWINKEKLIQFILDC--QDTENGGISDRPDDAVDVYHTYFGIAG 285

Query: 76  LSLLEYPGPKAIDPAYALPVDVVNRIFLSKK 107
           LSLLEYPG KAIDPAYALPVDVVNRIFL KK
Sbjct: 286 LSLLEYPGLKAIDPAYALPVDVVNRIFLGKK 314

[Close]

BLAST of CsaV3_7G003910 vs. ExPASy TrEMBL
Match: A0A6J1DHW7 (Geranylgeranyl transferase type-2 subunit beta OS=Momordica charantia OX=3673 GN=LOC111020651 PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 5.6e-35
Identity = 78/91 (85.71%), Postives = 81/91 (89.01%), Query Frame = 0


Query: 16  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAG 75
           C+S WVLSSLIMIDR HWINKE+LI+FILD   QDTENGGIS R DDAVDVYHT FGIAG
Sbjct: 233 CYSWWVLSSLIMIDRVHWINKEKLIQFILDC--QDTENGGISDRPDDAVDVYHTYFGIAG 292

Query: 76  LSLLEYPGPKAIDPAYALPVDVVNRIFLSKK 107
           LSLLEYPG KAIDPAYALPVDVVNRIFL KK
Sbjct: 293 LSLLEYPGLKAIDPAYALPVDVVNRIFLGKK 321

[Close]

BLAST of CsaV3_7G003910 vs. ExPASy TrEMBL
Match: W9RR75 (Geranylgeranyl transferase type-2 subunit beta OS=Morus notabilis OX=981085 GN=L484_002207 PE=3 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 4.7e-34
Identity = 75/88 (85.23%), Postives = 79/88 (89.77%), Query Frame = 0


Query: 16  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAG 75
           C+S WVLSSLIMIDR HWINKE+L+KFILD   QDTENGGIS R DDAVDVYHT FG+AG
Sbjct: 285 CYSWWVLSSLIMIDRVHWINKEKLVKFILDC--QDTENGGISDRPDDAVDVYHTYFGVAG 344

Query: 76  LSLLEYPGPKAIDPAYALPVDVVNRIFL 104
           LSLLEYPG KAIDPAYALPVDVVNRIFL
Sbjct: 345 LSLLEYPGVKAIDPAYALPVDVVNRIFL 370

[Close]

BLAST of CsaV3_7G003910 vs. ExPASy TrEMBL
Match: A0A7J6E4X9 (Geranylgeranyl transferase type-2 subunit beta OS=Cannabis sativa OX=3483 GN=F8388_010648 PE=3 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 6.2e-34
Identity = 75/90 (83.33%), Postives = 79/90 (87.78%), Query Frame = 0


Query: 16  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAG 75
           C+S WVLSSLIMIDR HWINKE+L+KFILD   QD ENGGIS R DDAVDVYHT FG+AG
Sbjct: 226 CYSWWVLSSLIMIDRVHWINKEKLVKFILDC--QDVENGGISDRPDDAVDVYHTYFGVAG 285

Query: 76  LSLLEYPGPKAIDPAYALPVDVVNRIFLSK 106
           LSLLEYPG KAIDPAYALPVDVVNRIFL K
Sbjct: 286 LSLLEYPGLKAIDPAYALPVDVVNRIFLGK 313

[Close]

BLAST of CsaV3_7G003910 vs. TAIR 10
Match: AT5G12210.1 (RAB geranylgeranyl transferase beta subunit 1 )

HSP 1 Score: 139.4 bits (350), Expect = 1.8e-33
Identity = 67/94 (71.28%), Postives = 77/94 (81.91%), Query Frame = 0


Query: 12  LLPFCHSRWVLSSLIMIDRGHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCF 71
           L   C+S WVLSSLIMIDR HWI+K +L+KFILD   QD +NGGIS R +DAVD++HT F
Sbjct: 230 LADVCYSWWVLSSLIMIDRVHWIDKAKLVKFILDC--QDLDNGGISDRPEDAVDIFHTYF 289

Query: 72  GIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSK 106
           G+AGLSLLEYPG K IDPAYALPVDVVNRI  +K
Sbjct: 290 GVAGLSLLEYPGVKVIDPAYALPVDVVNRIIFTK 321

[Close]

BLAST of CsaV3_7G003910 vs. TAIR 10
Match: AT5G12210.2 (RAB geranylgeranyl transferase beta subunit 1 )

HSP 1 Score: 139.4 bits (350), Expect = 1.8e-33
Identity = 67/94 (71.28%), Postives = 77/94 (81.91%), Query Frame = 0


Query: 12  LLPFCHSRWVLSSLIMIDRGHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCF 71
           L   C+S WVLSSLIMIDR HWI+K +L+KFILD   QD +NGGIS R +DAVD++HT F
Sbjct: 229 LADVCYSWWVLSSLIMIDRVHWIDKAKLVKFILDC--QDLDNGGISDRPEDAVDIFHTYF 288

Query: 72  GIAGLSLLEYPGPKAIDPAYALPVDVVNRIFLSK 106
           G+AGLSLLEYPG K IDPAYALPVDVVNRI  +K
Sbjct: 289 GVAGLSLLEYPGVKVIDPAYALPVDVVNRIIFTK 320

[Close]

BLAST of CsaV3_7G003910 vs. TAIR 10
Match: AT3G12070.1 (RAB geranylgeranyl transferase beta subunit 2 )

HSP 1 Score: 132.1 bits (331), Expect = 2.8e-31
Identity = 63/90 (70.00%), Postives = 72/90 (80.00%), Query Frame = 0


Query: 16  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAG 75
           C+S WVLSSLIMIDR HWI K +L+KFILDS  QD +NGGIS R    VD++HT FG+AG
Sbjct: 230 CYSWWVLSSLIMIDRVHWIEKAKLVKFILDS--QDMDNGGISDRPSYTVDIFHTYFGVAG 289

Query: 76  LSLLEYPGPKAIDPAYALPVDVVNRIFLSK 106
           LSLLEYPG K IDPAYALPV V+NRI  +K
Sbjct: 290 LSLLEYPGVKTIDPAYALPVHVINRILFTK 317

[Close]

BLAST of CsaV3_7G003910 vs. TAIR 10
Match: AT3G12070.2 (RAB geranylgeranyl transferase beta subunit 2 )

HSP 1 Score: 132.1 bits (331), Expect = 2.8e-31
Identity = 63/90 (70.00%), Postives = 72/90 (80.00%), Query Frame = 0


Query: 16  CHSRWVLSSLIMIDRGHWINKERLIKFILDSQFQDTENGGISGRRDDAVDVYHTCFGIAG 75
           C+S WVLSSLIMIDR HWI K +L+KFILDS  QD +NGGIS R    VD++HT FG+AG
Sbjct: 230 CYSWWVLSSLIMIDRVHWIEKAKLVKFILDS--QDMDNGGISDRPSYTVDIFHTYFGVAG 289

Query: 76  LSLLEYPGPKAIDPAYALPVDVVNRIFLSK 106
           LSLLEYPG K IDPAYALPV V+NRI  +K
Sbjct: 290 LSLLEYPGVKTIDPAYALPVHVINRILFTK 317

The following BLAST results are available for this feature:

BLAST of CsaV3_7G003910 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8645752.1	5.1e-59	100.00	hypothetical protein Csa_020534 [Cucumis sativus]	[more]
XP_022153059.1	1.2e-34	85.71	geranylgeranyl transferase type-2 subunit beta 1-like isoform X1 [Momordica char...	[more]
XP_022153066.1	1.2e-34	85.71	geranylgeranyl transferase type-2 subunit beta 1-like isoform X2 [Momordica char...	[more]
XP_038887312.1	2.6e-34	85.71	geranylgeranyl transferase type-2 subunit beta 1-like isoform X3 [Benincasa hisp...	[more]
XP_038887307.1	2.6e-34	85.71	geranylgeranyl transferase type-2 subunit beta 1-like isoform X1 [Benincasa hisp...	[more]

BLAST of CsaV3_7G003910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84J75	2.5e-32	71.28	Geranylgeranyl transferase type-2 subunit beta 1 OS=Arabidopsis thaliana OX=3702...	[more]
Q9LHL5	4.0e-30	70.00	Geranylgeranyl transferase type-2 subunit beta 2 OS=Arabidopsis thaliana OX=3702...	[more]
P46960	4.6e-18	44.32	Geranylgeranyl transferase type-2 subunit beta OS=Schizosaccharomyces pombe (str...	[more]
O93830	1.0e-17	51.72	Geranylgeranyl transferase type-2 subunit beta OS=Candida albicans OX=5476 GN=BE...	[more]
P20133	1.7e-17	51.76	Geranylgeranyl transferase type-2 subunit beta OS=Saccharomyces cerevisiae (stra...	[more]

BLAST of CsaV3_7G003910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5L9	2.0e-56	98.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044970 PE=3 SV=1	[more]
A0A6J1DJK5	5.6e-35	85.71	Geranylgeranyl transferase type-2 subunit beta OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1DHW7	5.6e-35	85.71	Geranylgeranyl transferase type-2 subunit beta OS=Momordica charantia OX=3673 GN...	[more]
W9RR75	4.7e-34	85.23	Geranylgeranyl transferase type-2 subunit beta OS=Morus notabilis OX=981085 GN=L...	[more]
A0A7J6E4X9	6.2e-34	83.33	Geranylgeranyl transferase type-2 subunit beta OS=Cannabis sativa OX=3483 GN=F83...	[more]

BLAST of CsaV3_7G003910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12210.1	1.8e-33	71.28	RAB geranylgeranyl transferase beta subunit 1	[more]
AT5G12210.2	1.8e-33	71.28	RAB geranylgeranyl transferase beta subunit 1	[more]
AT3G12070.1	2.8e-31	70.00	RAB geranylgeranyl transferase beta subunit 2	[more]
AT3G12070.2	2.8e-31	70.00	RAB geranylgeranyl transferase beta subunit 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001330	PFTB repeat	PFAM	PF00432	Prenyltrans	coord: 34..79 e-value: 6.1E-8 score: 32.3
None	No IPR available	GENE3D	1.50.10.20		coord: 14..114 e-value: 3.0E-24 score: 87.6
None	No IPR available	PANTHER	PTHR11774:SF15	GERANYLGERANYL TRANSFERASE TYPE-2 SUBUNIT BETA	coord: 15..104
IPR045089	Prenyltransferase subunit beta	PANTHER	PTHR11774	GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT	coord: 15..104
IPR008930	Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid	SUPERFAMILY	48239	Terpenoid cyclases/Protein prenyltransferases	coord: 16..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G003910.1	CsaV3_7G003910.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0008318	protein prenyltransferase activity