CsaV3_7G003710 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_7G003710
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Actin-related protein 8
Location	chr7: 2767206 .. 2768522 (+)
RNA-Seq Expression	CsaV3_7G003710
Synteny	CsaV3_7G003710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTCTCTCTCTCTCTCTCTCTATTATTGTTTTCTTTTCATGGAGAACAACGACCACGCCACCCTTCAAGCTGATGATTCCCTGCCGGAAAATTCCTCCGCCGTCAGAGATGAAGAGCAAGAAGAGAGTGGTTGGACTGATTACTTGGAGGATTATTTCAATTCGGAATTTGTTGAAAGAGAGAGCAGTTTTTTGTGTTCAAGTATTGGGAGCTGTTCAAATTGGGATGATCGTAATAATATTTCATATCCCAGTTATGATATTAATTATAATATCAATATTGGGAATGTAAATTATGACGATTTCCCAAAGTCAAATAACCTAACTTTCAAGAAAACAAGAACTCAGAAGATTTTTGAGGATGATGATTCCTTACAAGATACTGCTACTTCTCCTATTCATAGTCCAAAAGTTAGCACATTATGTTGTTTAATTTTCTTCTTCCCTTTTTAATTTTTTACTTTCTATGATCTTGAAAATCAATATTGAAAAATCTCTCTGTCTTAGGTTGTTGATCTGAAAGTGAGAACATCCCAAGAAAATCAAGGGTTTGATGATCACATCACAATCTTCGCTAACTCTACGGTAATTGCTCTCTTCTTTCTTCTCTTCGTGAAATTAAGCATGACGGTTGTAAACCGTTGGATGATGTAGATGAAAATTTATGGGTTTTTTTTAAAAAAAAAATTAAACCCACATGATGATTTTTGTAGGGAAGTGGAAGGCAAATGGGGAAATATTATTCAAACAAAGAGAAGGGTGTTTATTCAGCTGAGAAAAAAGGGTTGTGTTTGTTTCCCTTCTCCATGCTCCTTAATTACCATAATTGAGACTATGTATTTTTTAAGCAATAATATGTTGAGCAATTTAAATACTCTCTCTCTCTC

mRNA sequence

ATGGAGAACAACGACCACGCCACCCTTCAAGCTGATGATTCCCTGCCGGAAAATTCCTCCGCCGTCAGAGATGAAGAGCAAGAAGAGAGTGGTTGGACTGATTACTTGGAGGATTATTTCAATTCGGAATTTGTTGAAAGAGAGAGCAGTTTTTTGTGTTCAAGTATTGGGAGCTGTTCAAATTGGGATGATCGTAATAATATTTCATATCCCAGTTATGATATTAATTATAATATCAATATTGGGAATGTAAATTATGACGATTTCCCAAAGTCAAATAACCTAACTTTCAAGAAAACAAGAACTCAGAAGATTTTTGAGGATGATGATTCCTTACAAGATACTGCTACTTCTCCTATTCATAGTCCAAAAGTTGTTGATCTGAAAGTGAGAACATCCCAAGAAAATCAAGGGTTTGATGATCACATCACAATCTTCGCTAACTCTACGGGAAGTGGAAGGCAAATGGGGAAATATTATTCAAACAAAGAGAAGGGTGTTTATTCAGCTGAGAAAAAAGGGTTGTGTTTGTTTCCCTTCTCCATGCTCCTTAATTACCATAATTGA

Coding sequence (CDS)

ATGGAGAACAACGACCACGCCACCCTTCAAGCTGATGATTCCCTGCCGGAAAATTCCTCCGCCGTCAGAGATGAAGAGCAAGAAGAGAGTGGTTGGACTGATTACTTGGAGGATTATTTCAATTCGGAATTTGTTGAAAGAGAGAGCAGTTTTTTGTGTTCAAGTATTGGGAGCTGTTCAAATTGGGATGATCGTAATAATATTTCATATCCCAGTTATGATATTAATTATAATATCAATATTGGGAATGTAAATTATGACGATTTCCCAAAGTCAAATAACCTAACTTTCAAGAAAACAAGAACTCAGAAGATTTTTGAGGATGATGATTCCTTACAAGATACTGCTACTTCTCCTATTCATAGTCCAAAAGTTGTTGATCTGAAAGTGAGAACATCCCAAGAAAATCAAGGGTTTGATGATCACATCACAATCTTCGCTAACTCTACGGGAAGTGGAAGGCAAATGGGGAAATATTATTCAAACAAAGAGAAGGGTGTTTATTCAGCTGAGAAAAAAGGGTTGTGTTTGTTTCCCTTCTCCATGCTCCTTAATTACCATAATTGA

Protein sequence

MENNDHATLQADDSLPENSSAVRDEEQEESGWTDYLEDYFNSEFVERESSFLCSSIGSCSNWDDRNNISYPSYDINYNINIGNVNYDDFPKSNNLTFKKTRTQKIFEDDDSLQDTATSPIHSPKVVDLKVRTSQENQGFDDHITIFANSTGSGRQMGKYYSNKEKGVYSAEKKGLCLFPFSMLLNYHN*

Homology

[Close]

BLAST of CsaV3_7G003710 vs. NCBI nr
Match: XP_011658705.1 (vascular-related unknown protein 1 [Cucumis sativus] >KGN43534.1 hypothetical protein Csa_020147 [Cucumis sativus])

HSP 1 Score: 381.7 bits (979), Expect = 3.6e-102
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0


Query: 1   MENNDHATLQADDSLPENSSAVRDEEQEESGWTDYLEDYFNSEFVERESSFLCSSIGSCS 60
           MENNDHATLQADDSLPENSSAVRDEEQEESGWTDYLEDYFNSEFVERESSFLCSSIGSCS
Sbjct: 1   MENNDHATLQADDSLPENSSAVRDEEQEESGWTDYLEDYFNSEFVERESSFLCSSIGSCS 60

Query: 61  NWDDRNNISYPSYDINYNINIGNVNYDDFPKSNNLTFKKTRTQKIFEDDDSLQDTATSPI 120
           NWDDRNNISYPSYDINYNINIGNVNYDDFPKSNNLTFKKTRTQKIFEDDDSLQDTATSPI
Sbjct: 61  NWDDRNNISYPSYDINYNINIGNVNYDDFPKSNNLTFKKTRTQKIFEDDDSLQDTATSPI 120

Query: 121 HSPKVVDLKVRTSQENQGFDDHITIFANSTGSGRQMGKYYSNKEKGVYSAEKKGLCLFPF 180
           HSPKVVDLKVRTSQENQGFDDHITIFANSTGSGRQMGKYYSNKEKGVYSAEKKGLCLFPF
Sbjct: 121 HSPKVVDLKVRTSQENQGFDDHITIFANSTGSGRQMGKYYSNKEKGVYSAEKKGLCLFPF 180

Query: 181 SMLLNYHN 189
           SMLLNYHN
Sbjct: 181 SMLLNYHN 188

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BLAST of CsaV3_7G003710 vs. NCBI nr
Match: XP_008455422.1 (PREDICTED: uncharacterized protein LOC103495585 [Cucumis melo])

HSP 1 Score: 341.3 bits (874), Expect = 5.4e-90
Identity = 170/186 (91.40%), Postives = 174/186 (93.55%), Query Frame = 0


Query: 3   NNDHATLQADDSLPENSSAVRDEEQEESGWTDYLEDYFNSEFVERESSFLCSSIGSCSNW 62
           NN++AT QA DS PENSSA   EEQEESGWTDYLEDYFNSE VERESSFLCSSIGSCSNW
Sbjct: 7   NNNNATPQAPDSPPENSSAAGAEEQEESGWTDYLEDYFNSELVERESSFLCSSIGSCSNW 66

Query: 63  DDRNNISYPSYDINYNINIGNVNYDDFPKSNNLTFKKTRTQKIFEDDDSLQDTATSPIHS 122
           DD NNISYP+YDINYNIN+GNVNYDDFPKSNNLTFKKTRTQKIFEDDDSLQDTATSPIHS
Sbjct: 67  DDLNNISYPNYDINYNINVGNVNYDDFPKSNNLTFKKTRTQKIFEDDDSLQDTATSPIHS 126

Query: 123 PKVVDLKVRTSQENQGFDDHITIFANSTGSGRQMGKYYSNKEKGVYSAEKKGLCLFPFSM 182
           PKVVDLKVRTSQEN  FDDHITIFANSTGSGRQMGKYYSNKEK VYSAEKKGLCL PFSM
Sbjct: 127 PKVVDLKVRTSQENPRFDDHITIFANSTGSGRQMGKYYSNKEKSVYSAEKKGLCLLPFSM 186

Query: 183 LLNYHN 189
           LLNYHN
Sbjct: 187 LLNYHN 192

[Close]

BLAST of CsaV3_7G003710 vs. NCBI nr
Match: XP_038888852.1 (vascular-related unknown protein 1-like [Benincasa hispida])

HSP 1 Score: 223.8 bits (569), Expect = 1.3e-54
Identity = 131/195 (67.18%), Postives = 145/195 (74.36%), Query Frame = 0


Query: 1   MENNDHATLQADDSLPENSS-------AVRDEEQEESGWTDYLEDYFNSEFVERESSFLC 60
           ME N +AT +  DS PENSS       A   EEQEESGWTDYLEDYF+S     ESS+LC
Sbjct: 1   MEKN-NATAEGSDSPPENSSTSSSAAAAAGAEEQEESGWTDYLEDYFSS-----ESSYLC 60

Query: 61  SSIGSCSNWDDRNNISYPSYDINYNINIGNVNYDDFPKSNNLTFKKTRTQKIFEDDDSLQ 120
           SSIGSCSNWD  +NIS P+YDIN   +IG + +D     N LTFKKTRTQKIFE DDSLQ
Sbjct: 61  SSIGSCSNWD--HNISNPNYDINKTNHIGKMIFD---VPNKLTFKKTRTQKIFE-DDSLQ 120

Query: 121 DTATSPIHSPKVVDLKVRTSQENQGFDDHITIFANSTGSGRQMGKYYSNKEKGVYSAEKK 180
           DTATSPIHSPKV DLKV+TS EN  FD    +  N TGS RQ+GKYYS+KE GVYS+EKK
Sbjct: 121 DTATSPIHSPKVADLKVKTSHENPRFD----VITNLTGSERQLGKYYSDKENGVYSSEKK 179

Query: 181 GLCLFPFSMLLNYHN 189
           GLCLFP SMLLNYHN
Sbjct: 181 GLCLFPLSMLLNYHN 179

[Close]

BLAST of CsaV3_7G003710 vs. NCBI nr
Match: XP_022136166.1 (uncharacterized protein LOC111007924 [Momordica charantia])

HSP 1 Score: 150.2 bits (378), Expect = 1.8e-32
Identity = 102/194 (52.58%), Postives = 121/194 (62.37%), Query Frame = 0


Query: 1   MENNDHATLQADDSLPENSSAVRDEEQEESGWTDYLEDYFNSEFVERESSFLCSSIGSCS 60
           ME N  A    + S    +S     E+EESGWTDYLEDYF+S  +ERE SFLCSSIGSCS
Sbjct: 1   MEKNKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFLCSSIGSCS 60

Query: 61  NWDDRN---NISYPSYDINYNINIGNVNYDDFPKSNNLTFKKTRTQKIFEDDDSLQDTAT 120
             DD N   N+  P+       ++G V + D PK      K TRTQKIF+ DDSL+DTAT
Sbjct: 61  --DDGNTTTNVLSPTL-----CSVGEV-FLDSPKKLICFKKLTRTQKIFQ-DDSLEDTAT 120

Query: 121 SPIHSPKVVDLKVRTSQENQGFDDHITIFANSTGSGRQMGKYYSNKEKGVYSA-----EK 180
           SP+HSPKV DLKV+T   N  FDDH  I     GS   MG  YS  EKGV +A     ++
Sbjct: 121 SPVHSPKVADLKVKTKHVNLKFDDHAMI----RGS---MGSDYSEGEKGVCTAAGGDLKQ 178

Query: 181 KGLCLFPFSMLLNY 187
           +GLCLFPFSMLL+Y
Sbjct: 181 RGLCLFPFSMLLHY 178

[Close]

BLAST of CsaV3_7G003710 vs. NCBI nr
Match: OMO75522.1 (hypothetical protein CCACVL1_16145 [Corchorus capsularis])

HSP 1 Score: 94.0 bits (232), Expect = 1.5e-15
Identity = 64/182 (35.16%), Postives = 100/182 (54.95%), Query Frame = 0


Query: 24  DEEQEESGWTDYLEDYFNSEFVERESSFLCSSIGSCSNWDDRNNISYPSYDINYNINIGN 83
           +EE+EESGWT Y ED+ N  + +++ +  CSS    S+       +  ++ ++ N NI  
Sbjct: 30  EEEEEESGWTSYFEDFDN--YQQQQQNSYCSSFSCSSSLISDAATTGAAWKLSTNNNIPV 89

Query: 84  VNYDDFPKS-NNLTFKKTRTQKIFEDDDSLQDTATSPIHSPKVVDLKVRTSQENQGFDDH 143
                 PK+ N L FKKTRT++I ++DDSL+DTA+SP++SPKV +L        +  +DH
Sbjct: 90  FACSSTPKTPNKLRFKKTRTKEISQEDDSLEDTASSPVNSPKVSELMKMNDMNPRKREDH 149

Query: 144 ITIFANSTG----------SGRQMGKYYSNKEK--------GVYSAEKKGLCLFPFSMLL 187
             I ++  G          S  Q+ ++  + E+        G    +K+GLCL PFSML+
Sbjct: 150 HQIHSSQQGMKKGGGSENYSEIQIEQHEQDDERRMNFGDDHGCTELKKRGLCLVPFSMLV 209

[Close]

BLAST of CsaV3_7G003710 vs. ExPASy Swiss-Prot
Match: Q9LSZ3 (Vascular-related unknown protein 1 OS=Arabidopsis thaliana OX=3702 GN=VUP1 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.7e-06
Identity = 53/192 (27.60%), Postives = 85/192 (44.27%), Query Frame = 0


Query: 25  EEQEESGWTDYLEDYFN---------SEFVERESSFLCSSIGSCSNWDDRNNISYPSYDI 84
           + QEESGWT YL+D+ N         ++  ++ S  L ++  S  +    +  S  S+ +
Sbjct: 33  DHQEESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTSLVSDAATHAFSGKSFPV 92

Query: 85  NYNINIGNVNYDDFPKSNNLTFKKTRTQKIFEDDDSLQDTATSPIHSPKVVDLKVRTSQE 144
           N            FP    L F + RT+KI E DDSL+DTA+SP++SPKV   +      
Sbjct: 93  N------------FPA--KLKFGRGRTKKICE-DDSLEDTASSPVNSPKVSHFE-HIQTP 152

Query: 145 NQGFDDHIT---IFANSTGSG-----------------RQMGKYYSNKEKGVYSAEKKGL 188
            +  +D+++   +  N  G G                 R +    +N          +GL
Sbjct: 153 PRKIEDYVSSSFVMGNIRGMGDHQIQIQEGGEQKVTLMRNLIDGNNNNNNNNMDLRSRGL 208

[Close]

BLAST of CsaV3_7G003710 vs. ExPASy Swiss-Prot
Match: Q5BPG5 (Vascular-related unknown protein 4 OS=Arabidopsis thaliana OX=3702 GN=VUP4 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 3.6e-04
Identity = 49/176 (27.84%), Postives = 77/176 (43.75%), Query Frame = 0


Query: 17  ENSSAVRDEEQEESGWTDYLEDYFNSEFVERESSFLCSSIGSCSNWDDRNNISYPSYDIN 76
           E +    D+  EES WT Y ED+F       E+S     +G  S+    +  S+ +    
Sbjct: 15  ETAMFTDDQNPEESSWTMYFEDFF-------EASSSIVDVGDFSSSSVSDAASFVATKKT 74

Query: 77  YNINIGNVNYDDFPKSNNLTFKKTRTQKI-FEDDDSLQDTATSPIHSPKV---VDLKVRT 136
            N++          + +NL  K+TR ++I F     L+DTA+SP  SP V   ++L+   
Sbjct: 75  LNVS--------KQEGSNLDIKRTRNREIPFGRHHDLEDTASSPSGSPNVYSMMNLQDNN 134

Query: 137 SQENQGF--DDHITIFANSTGSGRQMGKYYSNKEKGVYSAEKKGLCLFPFSMLLNY 187
           ++   G   DD   + A     G  +              +KKGLCL P SM+ N+
Sbjct: 135 TRHGGGIVGDDEKRVSAVPNQGGLPI------------DLKKKGLCLVPLSMVTNF 163

[Close]

BLAST of CsaV3_7G003710 vs. ExPASy TrEMBL
Match: A0A0A0K3L1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044250 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 1.8e-102
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 0


Query: 1   MENNDHATLQADDSLPENSSAVRDEEQEESGWTDYLEDYFNSEFVERESSFLCSSIGSCS 60
           MENNDHATLQADDSLPENSSAVRDEEQEESGWTDYLEDYFNSEFVERESSFLCSSIGSCS
Sbjct: 1   MENNDHATLQADDSLPENSSAVRDEEQEESGWTDYLEDYFNSEFVERESSFLCSSIGSCS 60

Query: 61  NWDDRNNISYPSYDINYNINIGNVNYDDFPKSNNLTFKKTRTQKIFEDDDSLQDTATSPI 120
           NWDDRNNISYPSYDINYNINIGNVNYDDFPKSNNLTFKKTRTQKIFEDDDSLQDTATSPI
Sbjct: 61  NWDDRNNISYPSYDINYNINIGNVNYDDFPKSNNLTFKKTRTQKIFEDDDSLQDTATSPI 120

Query: 121 HSPKVVDLKVRTSQENQGFDDHITIFANSTGSGRQMGKYYSNKEKGVYSAEKKGLCLFPF 180
           HSPKVVDLKVRTSQENQGFDDHITIFANSTGSGRQMGKYYSNKEKGVYSAEKKGLCLFPF
Sbjct: 121 HSPKVVDLKVRTSQENQGFDDHITIFANSTGSGRQMGKYYSNKEKGVYSAEKKGLCLFPF 180

Query: 181 SMLLNYHN 189
           SMLLNYHN
Sbjct: 181 SMLLNYHN 188

[Close]

BLAST of CsaV3_7G003710 vs. ExPASy TrEMBL
Match: A0A1S3C0F7 (uncharacterized protein LOC103495585 OS=Cucumis melo OX=3656 GN=LOC103495585 PE=4 SV=1)

HSP 1 Score: 341.3 bits (874), Expect = 2.6e-90
Identity = 170/186 (91.40%), Postives = 174/186 (93.55%), Query Frame = 0


Query: 3   NNDHATLQADDSLPENSSAVRDEEQEESGWTDYLEDYFNSEFVERESSFLCSSIGSCSNW 62
           NN++AT QA DS PENSSA   EEQEESGWTDYLEDYFNSE VERESSFLCSSIGSCSNW
Sbjct: 7   NNNNATPQAPDSPPENSSAAGAEEQEESGWTDYLEDYFNSELVERESSFLCSSIGSCSNW 66

Query: 63  DDRNNISYPSYDINYNINIGNVNYDDFPKSNNLTFKKTRTQKIFEDDDSLQDTATSPIHS 122
           DD NNISYP+YDINYNIN+GNVNYDDFPKSNNLTFKKTRTQKIFEDDDSLQDTATSPIHS
Sbjct: 67  DDLNNISYPNYDINYNINVGNVNYDDFPKSNNLTFKKTRTQKIFEDDDSLQDTATSPIHS 126

Query: 123 PKVVDLKVRTSQENQGFDDHITIFANSTGSGRQMGKYYSNKEKGVYSAEKKGLCLFPFSM 182
           PKVVDLKVRTSQEN  FDDHITIFANSTGSGRQMGKYYSNKEK VYSAEKKGLCL PFSM
Sbjct: 127 PKVVDLKVRTSQENPRFDDHITIFANSTGSGRQMGKYYSNKEKSVYSAEKKGLCLLPFSM 186

Query: 183 LLNYHN 189
           LLNYHN
Sbjct: 187 LLNYHN 192

[Close]

BLAST of CsaV3_7G003710 vs. ExPASy TrEMBL
Match: A0A6J1C2S1 (uncharacterized protein LOC111007924 OS=Momordica charantia OX=3673 GN=LOC111007924 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 8.6e-33
Identity = 102/194 (52.58%), Postives = 121/194 (62.37%), Query Frame = 0


Query: 1   MENNDHATLQADDSLPENSSAVRDEEQEESGWTDYLEDYFNSEFVERESSFLCSSIGSCS 60
           ME N  A    + S    +S     E+EESGWTDYLEDYF+S  +ERE SFLCSSIGSCS
Sbjct: 1   MEKNKDAPPLEEPSAAAANSGGGGGEEEESGWTDYLEDYFSSSDIEREKSFLCSSIGSCS 60

Query: 61  NWDDRN---NISYPSYDINYNINIGNVNYDDFPKSNNLTFKKTRTQKIFEDDDSLQDTAT 120
             DD N   N+  P+       ++G V + D PK      K TRTQKIF+ DDSL+DTAT
Sbjct: 61  --DDGNTTTNVLSPTL-----CSVGEV-FLDSPKKLICFKKLTRTQKIFQ-DDSLEDTAT 120

Query: 121 SPIHSPKVVDLKVRTSQENQGFDDHITIFANSTGSGRQMGKYYSNKEKGVYSA-----EK 180
           SP+HSPKV DLKV+T   N  FDDH  I     GS   MG  YS  EKGV +A     ++
Sbjct: 121 SPVHSPKVADLKVKTKHVNLKFDDHAMI----RGS---MGSDYSEGEKGVCTAAGGDLKQ 178

Query: 181 KGLCLFPFSMLLNY 187
           +GLCLFPFSMLL+Y
Sbjct: 181 RGLCLFPFSMLLHY 178

[Close]

BLAST of CsaV3_7G003710 vs. ExPASy TrEMBL
Match: A0A1R3HYU1 (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_16145 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 7.3e-16
Identity = 64/182 (35.16%), Postives = 100/182 (54.95%), Query Frame = 0


Query: 24  DEEQEESGWTDYLEDYFNSEFVERESSFLCSSIGSCSNWDDRNNISYPSYDINYNINIGN 83
           +EE+EESGWT Y ED+ N  + +++ +  CSS    S+       +  ++ ++ N NI  
Sbjct: 30  EEEEEESGWTSYFEDFDN--YQQQQQNSYCSSFSCSSSLISDAATTGAAWKLSTNNNIPV 89

Query: 84  VNYDDFPKS-NNLTFKKTRTQKIFEDDDSLQDTATSPIHSPKVVDLKVRTSQENQGFDDH 143
                 PK+ N L FKKTRT++I ++DDSL+DTA+SP++SPKV +L        +  +DH
Sbjct: 90  FACSSTPKTPNKLRFKKTRTKEISQEDDSLEDTASSPVNSPKVSELMKMNDMNPRKREDH 149

Query: 144 ITIFANSTG----------SGRQMGKYYSNKEK--------GVYSAEKKGLCLFPFSMLL 187
             I ++  G          S  Q+ ++  + E+        G    +K+GLCL PFSML+
Sbjct: 150 HQIHSSQQGMKKGGGSENYSEIQIEQHEQDDERRMNFGDDHGCTELKKRGLCLVPFSMLV 209

[Close]

BLAST of CsaV3_7G003710 vs. ExPASy TrEMBL
Match: A0A6J1ESI7 (Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111437171 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.1e-14
Identity = 65/121 (53.72%), Postives = 77/121 (63.64%), Query Frame = 0


Query: 13  DSLPENSS--AVRDEEQEESGWTDYLEDYFNSEFVERESSFL-CSSIGSCSNWDDRNNIS 72
           D  PE SS  A   EE  ESGWT+YLEDY  SE +ER+SSFL CSS GSCS WD      
Sbjct: 12  DPPPEKSSSAATGAEEPSESGWTEYLEDYLWSE-IERKSSFLCCSSSGSCS-WDISEANK 71

Query: 73  YPSYDINYNINIGNVNYDDFPKSNNLTFKKTRTQKIFEDDDSLQDTATSPIHSPKVVDLK 131
                ++   ++G V  D     N L+FKKT TQ+IF DDDSL+DTATSP+ +PKV DL 
Sbjct: 72  EKINGLSPFCSVGEVILD---APNKLSFKKTTTQRIF-DDDSLEDTATSPVLTPKVADLN 126

[Close]

BLAST of CsaV3_7G003710 vs. TAIR 10
Match: AT3G21710.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 54.3 bits (129), Expect = 1.2e-07
Identity = 53/192 (27.60%), Postives = 85/192 (44.27%), Query Frame = 0


Query: 25  EEQEESGWTDYLEDYFN---------SEFVERESSFLCSSIGSCSNWDDRNNISYPSYDI 84
           + QEESGWT YL+D+ N         ++  ++ S  L ++  S  +    +  S  S+ +
Sbjct: 33  DHQEESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTSLVSDAATHAFSGKSFPV 92

Query: 85  NYNINIGNVNYDDFPKSNNLTFKKTRTQKIFEDDDSLQDTATSPIHSPKVVDLKVRTSQE 144
           N            FP    L F + RT+KI E DDSL+DTA+SP++SPKV   +      
Sbjct: 93  N------------FPA--KLKFGRGRTKKICE-DDSLEDTASSPVNSPKVSHFE-HIQTP 152

Query: 145 NQGFDDHIT---IFANSTGSG-----------------RQMGKYYSNKEKGVYSAEKKGL 188
            +  +D+++   +  N  G G                 R +    +N          +GL
Sbjct: 153 PRKIEDYVSSSFVMGNIRGMGDHQIQIQEGGEQKVTLMRNLIDGNNNNNNNNMDLRSRGL 208

[Close]

BLAST of CsaV3_7G003710 vs. TAIR 10
Match: AT3G21710.1 (unknown protein; Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.4 bits (111), Expect = 1.5e-05
Identity = 39/110 (35.45%), Postives = 58/110 (52.73%), Query Frame = 0


Query: 25  EEQEESGWTDYLEDYFN---------SEFVERESSFLCSSIGSCSNWDDRNNISYPSYDI 84
           + QEESGWT YL+D+ N         ++  ++ S  L ++  S  +    +  S  S+ +
Sbjct: 33  DHQEESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTSLVSDAATHAFSGKSFPV 92

Query: 85  NYNINIGNVNYDDFPKSNNLTFKKTRTQKIFEDDDSLQDTATSPIHSPKV 126
           N            FP    L F + RT+KI E DDSL+DTA+SP++SPKV
Sbjct: 93  N------------FPA--KLKFGRGRTKKICE-DDSLEDTASSPVNSPKV 127

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BLAST of CsaV3_7G003710 vs. TAIR 10
Match: AT5G54790.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G50930.1); Has 53 Blast hits to 53 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.6 bits (109), Expect = 2.6e-05
Identity = 49/176 (27.84%), Postives = 77/176 (43.75%), Query Frame = 0


Query: 17  ENSSAVRDEEQEESGWTDYLEDYFNSEFVERESSFLCSSIGSCSNWDDRNNISYPSYDIN 76
           E +    D+  EES WT Y ED+F       E+S     +G  S+    +  S+ +    
Sbjct: 15  ETAMFTDDQNPEESSWTMYFEDFF-------EASSSIVDVGDFSSSSVSDAASFVATKKT 74

Query: 77  YNINIGNVNYDDFPKSNNLTFKKTRTQKI-FEDDDSLQDTATSPIHSPKV---VDLKVRT 136
            N++          + +NL  K+TR ++I F     L+DTA+SP  SP V   ++L+   
Sbjct: 75  LNVS--------KQEGSNLDIKRTRNREIPFGRHHDLEDTASSPSGSPNVYSMMNLQDNN 134

Query: 137 SQENQGF--DDHITIFANSTGSGRQMGKYYSNKEKGVYSAEKKGLCLFPFSMLLNY 187
           ++   G   DD   + A     G  +              +KKGLCL P SM+ N+
Sbjct: 135 TRHGGGIVGDDEKRVSAVPNQGGLPI------------DLKKKGLCLVPLSMVTNF 163

The following BLAST results are available for this feature:

BLAST of CsaV3_7G003710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011658705.1	3.6e-102	100.00	vascular-related unknown protein 1 [Cucumis sativus] >KGN43534.1 hypothetical pr...	[more]
XP_008455422.1	5.4e-90	91.40	PREDICTED: uncharacterized protein LOC103495585 [Cucumis melo]	[more]
XP_038888852.1	1.3e-54	67.18	vascular-related unknown protein 1-like [Benincasa hispida]	[more]
XP_022136166.1	1.8e-32	52.58	uncharacterized protein LOC111007924 [Momordica charantia]	[more]
OMO75522.1	1.5e-15	35.16	hypothetical protein CCACVL1_16145 [Corchorus capsularis]	[more]

BLAST of CsaV3_7G003710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSZ3	1.7e-06	27.60	Vascular-related unknown protein 1 OS=Arabidopsis thaliana OX=3702 GN=VUP1 PE=2 ...	[more]
Q5BPG5	3.6e-04	27.84	Vascular-related unknown protein 4 OS=Arabidopsis thaliana OX=3702 GN=VUP4 PE=2 ...	[more]

BLAST of CsaV3_7G003710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3L1	1.8e-102	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044250 PE=4 SV=1	[more]
A0A1S3C0F7	2.6e-90	91.40	uncharacterized protein LOC103495585 OS=Cucumis melo OX=3656 GN=LOC103495585 PE=...	[more]
A0A6J1C2S1	8.6e-33	52.58	uncharacterized protein LOC111007924 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A1R3HYU1	7.3e-16	35.16	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_16145 PE=4 ...	[more]
A0A6J1ESI7	1.1e-14	53.72	Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111437171 PE=4 SV=1	[more]

BLAST of CsaV3_7G003710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G21710.2	1.2e-07	27.60	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]
AT3G21710.1	1.5e-05	35.45	unknown protein; Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bac...	[more]
AT5G54790.1	2.6e-05	27.84	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	PANTHER	PTHR33974:SF2	VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED	coord: 17..187
IPR039280	VASCULAR-RELATED UNKNOWN PROTEIN	PANTHER	PTHR33974	VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED	coord: 17..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G003710.1	CsaV3_7G003710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010089	xylem development