CsaV3_6G039220 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G039220
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Exopolygalacturonase-like
Location	chr6: 22544672 .. 22559947 (-)
RNA-Seq Expression	CsaV3_6G039220
Synteny	CsaV3_6G039220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTCACTCATTTTTGACAAATTTAGTTAATAAATAATATTTGAGAGATAATTTCAATTCCAACAATCTTGTTCCTTTATAAATAGAGTTAGATGAATCAAAATTTAAAACATACCGATCATTCATTGATAAAAAAAAAAAAAAAAAAGAAAACAAGAACCAATCAGAGTAGAAAAAAGAAAAAAATGGGATTGATATCAAACATTGTGGCAATATTGCCATTGTTGTTATTGTTGGTGTCTAATTCTAAAGCTCAACCTGCTGCAGCTCAACCTTCAGCTCAACCAGCTCAACCTGCAGGTGATGCTGGTGGTGTTTTCGATATCACAAAATACGGTGCCAAACCTAATGCAGATATAACTGCGGTACGAATACTTGCATTAGTTGGACGAGAGATTTTAATTTATACAACATTTTAGTTATCAAACAAAATGATTTAATTTACAGGCATTGACAAGTGCATGGAAGGCGGCATGTGCATCGACCACTCCAAGTAAAGTTTTGATTCCAAAAGGAAGTTACGGATTAAGTCAATCCAACCTCAAAGGCCCTTGTAAAAGTCCTATCGAACTACAAATCGAAGGGACATTACAAGCTCCGGCCCATCCAGAAGGAGAAGGGCTACTCATTTTGGAAAATACCGATCTGTTGACAGTGTCAGGTACTGGAGTTTTGGATGGCCAAGGAAAAGCAGGTTGGGAAAAGAATGATTGCCATTTGAAGAAAGAATGCACCAAGCTTCCCATGGTAATTGCATGCTTTAATTACAACATGCTTATGTTATTAGCCTAACATCTTACGTATAATTTGACCACTACATATTTTTGCAATAATCAAACACGTTTTTAAATCAAGGGTTTTTTTTGTTTTGTTTAAAATGATCAGAATTTGAAGCTCAATTTCATCACAAATTCAATAGTAACGGGCATAACGTCATTGGATAGCAAGAATTTTCATATTAATCTTTTGGGTTGCAAGAACCTTACCTTTGACCACGTGACAATTACTGCACCGGGCAATAGTCCCAACACCGATGGAATTCACGTGAGTAGTTCAGAACAGATTAACATTCTCAATACCAATATCGCAACCGGAGATGATTGCATATCTGTGGGAGACTCCAACAAACAAGTAGCTATTAGCGATGTTACTTGCGGACCAGGACATGGAATTAGCATAGGAAGTTTGGGAAAATATACCAAGGAAAAAGAAGTGGTAGGAGTTACGGTGAAAAAATGCAAATTGACCGGTACTACAAACGGTGTTAGGATTAAAACATGGCCAGATTCTGCCGTCGCATTTCCAGCCACAGACATGCATTTTGAAGATATAGAAATGGATAATGTCAGTAACCCTATCATCATAGACCAAGAATATTGTCCATGGAACCAATGCAACCGAAAGGTATGTGCTAAAATTAGGTCTCTTTAGTTTTGAACTAATTAACTGACTCAAAAGACTGCAATAGTAATAATATTGTTCGAGTTATGTATTTTTGTTATGTTTTCTTTGTTGTTCAGGTTGCATCAAAAATTAAGATCAGCAATGTAAGCTTCAAGAATATTAGAGGCACGTCTGCAACTGCGATTGCAGTCAAAATTGTTTGCAGTAAGAGTATTCCATGTGAGGGAGTGGAAATTGCTGATATTGACCTCACTTATAGTGGACCAGAAGGTCCAATTAAGTCTCAGTGTGCAAATGTGAAACCCGTCATTACAGGAAAACAAAATCCTCCAATCTGTGGTGAAGTTGCACCAGCTGATGGTCCATCAACCGATTGAAGTTATGAAGATGTGACAAAAGTTATTATACGCATTAAAGTTCGATTACATGCATTTTTGTGATTATAGGCATGCTCTCAATAATTGTATTACGATTGTTTGGAGAGAAATAATAGTTGTCTGAGTTTCGATATGGTTGAAGCTTTTCTTATAAATAATAAATGTTTATATGGATTGGAAGGTTTAAATTATTGTCTACCACATAAATAATTTCATTTCTCTATTGTCACTTATTTGAATTTATATTTTTAAATATTATATCTTATGCTCCATCTTTTTAATGCGTAACCCTTTGCTACATAGGGACGTTTACGTGCAGACATGGACAAAATGGTATAACTCAATTAGTATAAATTTTTTAATTAACAATATATAAAAGAGGAATCAAAATCTCTAAACTTTATAGGCTAGAAAATTTGCATACTCATCAAAAGAATGTAACTATAGATTATATATATATATAAACATTTGCTTGAAAAATGTGAAATGGTGAAGAGATTAGTAGCTTTTAAACATTTATGTTTTTCCAAGAGATGGCAAATGAGAAAATGATACTTAAGAAAACAACACACCATAGGAAAATTGTATTGAAAGAATTTAATTTCGGGGTTTTCTTGAAAAAATAAATAAATCAGGTAATAATTTTATTTATATAATTTTAAAATTGGAAAAATGAATACATTTTTTTAAAAAAAAATTAAAACTCTATTTACATAATTTTAAAATTGGAAAAATGAATACATTGTTTTTTTATATAAAACTATTGTTAATTAAATAAGATTGCAATCCCCAATTAATTTATATTGTAAAATAGAATAGATGGGACAAATAATAATTCAACTAAAGTATTAGGAAACGTTTAGATGGCTCAACTAGTAACCACTCACATCATAATTGTATGTTGTAAAAATTAGGCTAACATTTTGACTACAACAAAAATGGTCTACGACAATAGTTATTTTCTGTTGTGAATAAAATCCGTGAAAGTTATTTACGGTCATAGAAGCGTGAGTCATGAAAATGTCGCAATAAGTTTTTTCATGACAGAAAATAAATGTCGTTAATTACTATTTTATAACAATAAATAACCGTCATCATTTGCGTATTAATGACAATTTAAAAAATGTTGCAAATTCGTTTGTTATAACGTTTTTTAAATGTCAAGGATATGTCAATCGCGACAGTTTTTTTCAAAAATAAATGTCATTGTTTTGCTATTGACGACATCTTTTTCCTATCAAATATAAGACAATCGTGAAAGTTTTTTTATATAAAAAATGTCATTGTTTTAGTATTGACGACAATTATGGAGTGTAACAAATTCATATATTATGACATTCATTTCTCGTTGTAAATTCCTCAATTTACTATCGTTTTTTCCTGTTCTCCTTGTCGCTCCGCCATTACACAAACCATTTGAATGACTGTATTTTGATGACCCTAATTAGCTTCTTTAAAGGAAATTTCATGAACTTTGTCGACTCCATTAGAACCTACAAAGGCAACATGAATATAAACATACATCACAAGACAAGAGAGTAAAACTCGCTTAAAGAGAGTACAACATGAATATAGCAAACCGTCCCAAGAAATTTAAGGAAGTAAGCTAAGAGGATAGTGTCAAATGGTTGGTGTAATATACGACAATATAATGAATTCATACAAAGTTTATCAACATATAAAACAAAATCTCATTTTAGAGTATGACTAAAGAACATTACCTGTAAAAAGTTAATTAAATGTAATTAAGAAACATTACAATTAATGTAAGATTGAAAAAAAACAATAGTGAGATTATAGAAGAATAACTAGAGTGTCCACACAACAAGGTCATCCAAATAGATTAGTGAATTCAAAGAACACGTACTAGATCCGAGCTTCTCAACCTCCCTGACAATGTGGGTCATTCCAGCCTTGTAATTAACCGAAAAAGCAGTTAAACTAGTCAAAACATAAAACATTAAACTAGTCTCATATGTGTTAAACTAGTCTCATATATCTCTTTCGTTGCTAAACATAATGCATTAAAAATTTCACTCATCAACCAAATATCATGTCTCTTTAGCTGTTTTAATCAAGATACACTTACGTTCAAACATAATGAGTTAAACTAGTTAAAACATTAAAAAAAGAAAGAACCTTTTTCACGGTGATGAGCTGCTCGTTTCCTTGGAATTTTTCCAAGGGACCCGTGCCTTGGGTGCTCAAAGGAAAGAGGGAAGAAGCAAACCACTAAAGTTACTATTAAATATGAATAAAGTAGAGAAAGGAAAAATGGACATACAGATTCATCTTCAAAGCGTACATCAAATTCTTCATCAAAGTCCACAGAATCTGACTTGTGTTCTGGGAAATATATTCTCAGTTGTTTCAACTTAAAAACTATAACATTTTCAAAGTAATCACATGGAATATCACAATTTTCAATTTACCACATATTTGCTGACAGTTGTATATATAATTTACCACTTATTTTAGATATATTTGGTTTAATTTTTCAAGTGCTTAATTAGAAGTCAACCATTTCAAATTTTCCACAGGTTAATCTTTAACTCTTCTCCGTAAGTTTATAATCAAGCATGGTTTCAGTTTCTCGTGAACGATCTCCTCCTTCGTATGCGTAAGTGCAAGATTGACTAGTGCTAATTTTGGTACCAAAAGGCAAATATATCAGTTAACATTTATTTCCCAAAATACACACAAACATGGAAAATTGATCTATGTATTCTTTCATGTTCACAACCTCAACAGTACGTGAACTTTGTGAAGATATACAAGAGCTAAAGATGAGATATACCTCAAGCATAATTACCCAACACGGCTGCTCCTCCATGTCTCCTGTTATACAAGGGGATGGTTAATATTACAACTATATTGTAGAATCATAAACAAAAAATAATGTTTATGACTATTCATTTTACACTGGCATCTGCTAGATGCAAGGAAGAACAACAAAGAACACAGTTTAAACTTTACACACTCATATCTACTTTGGAATATCTTCTCCTCTCTCGGTCGACACATGGGGACTCTCCAACACAAAAGAAATAACTGCCTAGTCTCATGTGAGAACTTTCACCCATCTATTCATCTATTCAACACTTCGTACTTAATGCTTAACCCCACACCCACCAACACAGCACATAAGCATTAGTTTAGGGAAAAGAACGAAAACGTACCCCATCCACTCAAGTCAACAGCATCACGACACTCTACTTTAAATTTTGATTGGTGACTACGAACCTCTCCAACAGTTTGTCTCTGTACCTCTGCTAGAGACGAACTTATTTCCACTGAGCTACAGGCATATATATGTAATTTTCACATGAAACGTAACGTGACGACCGAATATTGAAACAAGAGGAATTGGGAAATAGTGAATTTTTCAATAATTTCTTATATAAAAATCAGTGTGTAGGTTTATGTTATTTGACGAGTACCAGTGAAATTATTGTTCATAATTCAAGAATAGAAGACCTTGAAAACTATTCTTATATATTTTTAAGATACAAACAGAACATAGATTTTTTTTCCTTGTGATATATCTTATGATATCCGAATAATTTATTCACTAGTCAAAGTATTCATTAAGAAAATTGCATTATAAAATATATGATCGTAGACATATTGTGGAGGATTTTTACGGGAAAGCTACGAAGTTTATAAGATTTCTTCTTTAAAAACTAACCCCCTTTCACGCTTTTACAAATAGAAAATTGTTGGAAGTTGTTCCTTCCCCCCCCTTGGTTTTATTGACAGCACAAGGTAGATGTGCTATGCATAAAGTAATTCAGCCTAAAAGCTAGAAAGATATCTCAGCTTGGTGCAAGCAGCAGAAGATATTTATCATTTCATGGTAGAGAAAAAATGCAGCAAAAACCACATACGTATAAGTCATAGTCTTGTAAACTCTTGTAGGTGCATTCAACATTATGTAATCCATTATCCCCTTTGCACACGTTCCTGATCCGCCACCAATTTCATATATCTGTGGATGCACAAAAAAAACACACATGCACACAATCAAGCCGGCATAACATAATTAAATTAAGATTAAAAATATAAAACATAACTTGTTCAACTTCTTGAAGGCTCCTATTTTAAAAGAAGGTTATAACTAATTAATTGTTTGACTGCCCGCAATATTGTCAATGGAATATTTGGACTGAAGAAACAGAATAAACCTGTGAAGAAAAATATAGAGATACTTTCCAACCTCCTGATTTTGTTGATATCGGTGCTTCTTTATTTGTATTGTTACCAATAAGGGGAAAGAAGGGGGAGATTTTTGTAAACACAAGGCTACACTATGAGAGGTCTTATGCACTTGCCCTCTACTCTCTGTCTGTCAATAATACAAAGTTTTTGCTTCCAACCAGGAAAAATTATGGCAAGGAAATATCCACATACATTCAAAATTATGATCCTATGAATAACATTGACACCAGGGGCTGTTTAAAAGTAGTGTTCAAACATAATTTTCTGTGTTTAGAAATAAAAATCAGATAATTCTTAGTAAAGAAATCTTGTCTGGATATTGATCGGGATGGACAAAAATAACAAATAATTTCACTCATTCTCATTCTCAACGAGTGCTCTCTTGCAGCTTCAAGTCTTAAATATTTTTTGGTCCAGTTTAATTCACATACATCATGTACGGGGGTGTTTGTCTAAAAGATGTAATTCAGACAAAATTGAAAATTGCACGCCTTACCGACGATCCATGGAGTTGAGGAAAAGAGGGAAAGAATGACAGAGAACAAGTTCACACAGAGAGAGAAATAGAAAAGGAATAGATGACTTACCGGTGAGGAGGTGATGGCTGCGGATTAAATGTTGAAGAGAGAATGCGGCGAATTGGAGATTACGGACACAAATTGAACAGAATAGGACGGAGGACGTTTCGTCTTCCAGTATAGAAGGTTCCGGTGGCACTAGAGTGAGGAGATGGACACGAAGGGGCAGTGGCGGTGACGGAATTGGGCATCGTCCGGAGATGACCTTCAAAGAGTTCGGAGATCGAGGCGGAATCAGGCGGTGGAGTGAAGAGATGGACAAGAATGGAACGGGGTTTTCCGATAGGGGTTAACATTTAATCCTAATTAATTTTTTATATATATCAAATATATTATTTTATTTCTGTTTGATGACATCAAATAACGGTCGCGAAAAATTCCGCATTTTCTAGTCAAAAACAGGTTTTTTCACCTTTTGTGACAATTTTTTTTTCTTCCTCCATTTTGTGATATAAATAACTGTCGTAGTAAAGAGTTTTTCTTGTAGTGTTTCAATAGGGTTGCACTACCCGATTGTGTGTTGGGTTTCGTTGTGGATCTCGTGTAGGTTTGATCTTGTTTTTCTTTAGTGTAGACTTGAGATACTTTAAGCTAAAGTTCTCGCATTGTTTTGATGTCGAGCCTACTCGAATACTTTAAGTTAACTAGTATAGTATATGGATAATTCAGCTAAATACATAAGAAGTAAAAATGTATCGTCTTTCCTTTTAAAGTTACTTGCTTTTCTACTTAGGGTACTGTGGTACTTGAATAGAGCTATCTATCAATTGATCCTCTGACACTTCCTATGTAATGTTAGGATGTTATTTTTGACACTCGAGGTTGAAGAGTGTAAATATGTATATAGATCCAACAATGGATTATGCAGGAGCACAAACTTTTCCAAATTCCACATTTGGATGGACTAATGTCAAAGATGTTGTTAATGCACACATTAGAATTCGAGCTTATGAGGTTCCATCAACCAATGGAAGATACTGTCTAGTTGAAAGTGTTATCACTATTCAAGAATTGTCAAGTTATTGCATGATCTCTACCCTTCTCTTCAACTTCCTGACAAGTAAGTCTTACTCGACCATCCCGATCTCCATAAGCATTTTCAAGAAAACGCTACTTTCTCGACAACGATCTTTTAAAATTATATAAGCCCTCCTTCCATGTCAATGTTTCTTGATCTTATTAAATTTGTAAACTTCATTTATTTATAGCTTCCTTCGCCTTGGTTTTGATTCCTATGATAGCATTTATTCTTAAGTTTCTTTACAGAAAGAATCAATCGTACATTATCGGCAGACCCAACAATGTCACAACAGTAGGTTCACAACTAATTTGGTTATTCACAATAGTTAGAGAAGGCATACAGTACTTTCATGGATGCTTTAAAAACTGTATGAATGTTGTCAACCGTTTCTTCTTGCATAAAAAAGCATCAATAATCGCTCAGTTGTTTATAAGTCCATTGTGGGTTGTTTTTATAAACTTAGGAAAACGTTTTGGAAATTATAAACCTTCAATCTACAATTATCTTGCACAAACAATTCCATAGGTAAATTCATGATTATATTTCAACTATAAACTCCATGTATCGATTCTTGATTTCAAGCTAATCAGTATAATATTTTCAACTGCAGGTGTGGCCGATGACAAACCGTTTACACCCGTGTATCAGGTGTCAGTCGAGAAAGCAAAGAACTTAGGCATTCAATTCATTCCCCTTGCAGAAAACCTGAAGGAAACTGTTGAGAGCTTGAAGGAAAAGAATTTTATCAACTTCTAAACTCTTAGGTATCTGAGAGCCATGAAATTGTGTGAATTTTCTGATAGAAATGAATAGGTAAAAAAATAAGTGCTTTGTGTGAGGCCTTAGAATGGAAGCTTTACTCAATGACTTCTATGATTTTCTATTACTGATTTTCTATTAGTGAGTGTAATGAAATTTCCACATGTCATATTGCCCTCTAATTTCCTTTTACTCTACAAGGTCCTCGATCAAGTTTATCACATTGGTAGAATTCTTTTAAAGGTAAAAACTAGTAGAAGTTTATCACATGGATATTATTTATCAATGCATTGGTGGAAATTAATATGAGTCTAGGTTGATAGAAGTCTACCAAGGTCTATAATAAATATGTTGTAATATTTTGCTATATTTGTATATGTTTTCAACAATTTTGACATTTAAAATTTTCTTTCACGCACAAAATTTTAACACTAGGGATGAAAATTTCAAGTCCAAAAATACAATGTAAACCGAAGTAAAACATTTTTTTTTTGCTTTTTCTTTTTAATTAGGTTATACGATAGAGGGAGGTGAAGAAATTATAAATAGACAACTGTTATTTCTCTCCAAACAATCGTAATACAATTATTGAGAGCATGCCTATAATCACAAAAATGCATGTAATCGAACTTTAATGCGTATAATAACTTTTGTCACATCTTCATAACTTCAATCGGTTGATGGACCATCAGCTGGTGCAACTTCACCACAGATTGGAGGATTTTGTTTTCCTGTAATGACGGGTTTCACATTTGCACACTGAGACTTAATTGGACCTTCTGGTCCACTATAAGTGAGGTCAATATCAGCAATTTCCACTCCCTCACATGGAATACTCTTACTGCAAACAATTTTGACTGCAATCGCAGTTGCAGACGTGCCTCTAATATTCTTGAAGCTTACATTGCTGATCTTAATTTTTGATGCAACCTGAACAACAAAGAAAACATAACAAAAATACATAACTCGAACAATATTATTACTATTGCAGTCTTTTGAGTCAGTTAATTAGTTCAAAACTAAAGAGACCTAATTTTAGCACATACCTTTCGGTTGCATTGGTTCCATGGACAATATTCTTGGTCTATGATGATAGGGTTACTGACATTATCCATTTCTATATCTTCAAAATGCATGTCTGTGGCTGGAAATGCGACAGCAGAATCTGGCCATGTTTTGATCCTAACACCGTTTGTAGTACCGGTCAATTTGCATTTTTTCACCGTAACTCCTACCACTTCTTTTTCCTTGGTATATTTTCCCAAACTTCCTATGCTAATTCCATGTCCTGGTCCGCAAGTAACATCGCTAATAGCTACTTGTTTGTTGGAATCTCCCACAGATATGCAATCATCTCCGGTTGCGATATTGGTATTGAGAATGTTAATCTGTTCTGAACTACTCACGTGAATTCCATCGGTGTTGGGACTATTGCCCGGTGCAGTAATTGTCACGTGGTCAAAGGTAAGGTTCTTGCAACCCAAAAGATTAATATGAAAATTCTTGCTATCCAATGACGTTATGCCCGTTACTATTGAATTTGTGATGAAATTGAGCTTCAAATTCTGATCATTTTAAACAAAACAAAAAAAACCCTTGATTTAAAAACGTGTTTGATTATTGCAAAAATATGTAGTGGTCAAATTATACGTAAGATGTTAGGCTAATAACATAAGCATGTTGTAATTAAAGCATGCAATTACCATGGGAAGCTTGGTGCATTCTTTCTTCAAATGGCAATCATTCTTTTCCCAACCTGCTTTTCCTTGGCCATCCAAAACTCCAGTACCTGACACTGTCAACAGATCGGTATTTTCCAAAATGAGTAGCCCTTCTCCTTCTGGATGGGCCGGAGCTTGTAATGTCCCTTCGATTTGTAGTTCGATAGGACTTTTACAAGGGCCTTTGAGGTTGGATTGACTTAATCCGTAACTTCCTTTTGGAATCAAAACTTTACTTGGAGTGGTCGATGCACACGCCTCCTTCCATGCACTTGTCAAAGCCTGTAAATTAAATCATTTTGTTTGATAACTAAAATGTTGTATAAATTAAAATCTCTCGTCCAACTAATGCAAGTACTCGTACCGCAGTTATATCTGCATTAGGTTTGGCACCGTATTTTGTGATATCGAAAACACCACCAGCACCACCTGCAGGTTGAGCTGGTTGAGCTGAAGGTTGAGCTGCAGCAGGTTGAGCTTTAGAATTAGACACCAACAATAACAACAATGGCAATAATGCCACAACGTTTGATATCAATCCCATTTTTTTTTTTTTTCTACTCTGATTGGTTCTTGTTTTCTTTTTTTTCTTTTTTTTTTTATCAATGAATGATCGGTATGTTTTAAATTTTGATTCATCTAACTCTATTTATAAAGGAACAAGATTGTTGGAATTGAAATTATCTCTCAAATATTATTTATTAACTAAATTTGTCAAAAATGAGTGAGCGGTCGAAGTTAAATGCATGTGTGCTATGATTAGCTTTTCGTGGCTTAAACATTGGATGACTCATTCTCTCACACTCACCTTAACAAAGGTCATTCCTTGAACGTTTCTCTCACAAACTTTTTATTCCTTATCATTAAATTTTAGAATAAATCTAACGAACAGTATCTAATCTAAATTATCCAATGAAAATTGGGGTGGATATAGTAAAAAGATAAAACAATTTACAAAGTATAGCAAAAAAATTTAAATGGTACGATGAGTTTGATGGATTTTGTTATATTTAGTAAATAGTTAAAATATTTTGCTATATATTTTTTTAAATGGACATTTTTTAAAATAGCAAAATAAATTAAAATATTTACAAACGATAGCAAAATTTTGGATTCTGTCACTGATATAGGCTTCTATCACTATAGCATATCGATGACTATCAGTAATAGAATTTGCTATAGGTTGTAAATATTTTCTAAAATTTACAATTTTTAAAAATTCTCCGGTTGAAAATGTCTCATTATTCAAACCTTTATATATCTAAAAAATAAAAAATGCCACACGTGGTAAAAAGACTAATTGTTAACTTAAAGTGTATGGCAGGTCTTTCAATCGAAATATTAATGAAAGAATTAAACTCTAAAGTAACATTAAGTGATAGAAGCTATAAAACTTAAAACTCTTATCAAGTTTATGTTAACTCATTTAATAATATTAAGGAATGACGTTTGTTAAGGTGAGTGTGAGAGAATGAGTCATCCCATGTTTAAGCCACGAAAAGCTAATCATAGCACACATGCATTTAACTTCGACCGCTCACTCATTTTTGACAAATTTAGTTAATAAATATTTGAGAGATAATTTCAATTCCAACAATCTTGTTCCTTTATAAATAGAGTTAGATGAATCAAAATTTAAAACATACCGATCATTCATTGATAAAAAAAAAAAAAAAAGAAAACAAGAACCAATCAGAGTAGAAAAAAGAAAAAAATGGGATTGATATCAAACATTGTGGCAATATTGCCATTGTTGTTATTGTTGGTGTCTAATTCTAAAGCTCAACCTGCTGCAGCTCAACCTTCAGCTCAACCAGCTCAACCTGCAGGTGGTGCTGGTGGTGTTTTCGATATCACAAAATACGGTGCCAAACCTAATGCAGATATAACTGCGGTACGAATACTTGCATTAGTTGGACGAGAGATTTTAATTTATACAACATTTTAGTTATCAAACAAAATGATTTAATTTACAGGCATTGACAAGTGCATGGAAGGAGGCATGTGCATCGACCACTCCAAGTAAAGTTTTGATTCCAAAAGGAAGTTACGGATTAAGTCAATCCAACCTTAAAGGCCCTTGTAAAAGTCCTATCGAACTACAAATCGAAGGGACATTACAAGCTCCGGCCCATCCAGAAGGAGAAGGGCTACTCATTTTGGAAAATACCGATCTGTTGACAGTGTCAGGTACTGGAGTTTTGGATGGCCAAGGAAAAGCAGGTTGGGAAAAGAATGATTGCCATTTGAAGAAAGAATGCACCAAGCTTCCCATGGTAATTGCATGCTTTAATTACAACATGCTTATGTTATTAGCCTAACATCTTACGTATAATTTGACCACTACATATTTTTGCAATAATCAAACACGTTTTTAAATCAAGGGTTTTTTTTGTTTTGTTTAAAATGATCAGAATTTGAAGCTCAATTTCATCACAAATTCAATAGTAACGGGCATAACGTCATTGGATAGCAAGAATTTTCATATTAATCTTTTGGGTTGCAAGAACCTTACCTTTGACCACGTGACAATTACTGCACCGGGCAATAGTCCCAACACCGATGGAATTCACGTGAGTAGTTCAGAACAGATTAACATTCTCAATACCAATATCGCAACCGGAGATGATTGCATATCTGTGGGAGATTCCAACAAACAAGTAGCTATTAGCGATGTTACTTGCGGACCAGGACATGGAATTAGCATAGGAAGTTTGGGAAAATATACCAAGGAAAAAGAAGTGGTAGGAGTTACGGTGAAAAAATGCAAATTGACCGGTACTACAAACGGTGTTAGGATCAAAACATGGCCAGATTCTGCCGTCGCATTTCCAGCCACAGACATGCATTTTGAAGATATAGAAATGGATAATGTCAGTAACCCTATCATCATAGACCAAGAATATTGTCCATGGAACCAATGCAACCGAAAGGTATGTGCTAAAATTAGGTCTCTTTAGTTTTGAACTAATTAACTGACTCAAAAGACTGCAATAGTAATAATATTGTTCGAGTTATGTATTTTTGTTATGTTTTCTTTGTTGTTCAGGTTGCATCAAAAATTAAGATCAGCAATGTAAGCTTCAAGAATATTAGAGGCACGTCTGCAACTGCGATTGCAGTCAAAATTGTTTGCAGTAAGAGTATTCCATGTGAGGGAGTGGAAATTGCTGATATTGACCTCACTTATAGTGGACCAGAAGGTCCAATTAAGTCTCAGTGTGCAAATGTGAAACCCGTCATTACAGGAAAACAAAATCCTCCAATCTGTGGTGAAGTTGCACCAGCTGATGGTCCATCAACCGATTGAAGTTATGAAGATGTGACAAAAGTTATTATACGCATTAAAGTTCGATTACATGCATTTTTGTGATTATAGGCATGCTCTCAATAATTGTATTACGATTGTTTGGAGAGAAATAACAGTTGTCTAAGTCTCGATATAGTCGAAGACTTTTATATTTATGAAGTACAAAGCACCAAAGCAATTTTTCTACAAAATTTTATTTGTATTTTCTTTCTTTCGCTAACACAACTCTTTGTACACAAATATGTATAAAATTACTGTAAATGATAAAATTGTTGAAAACATCTACATAAGATAGCAAATTTAAAATTCTATCAAAGATAGATATTGATGGAAGTGATAATTGTCTATCAGTATCATTGATAGATTCAAAAAATTTCTATCACAAAATGGGAAATTGACCGTAAAGGATAAATAAAAAGGAGTACTCAAAGTAGAATCAAGCAATTTTCAAGACGCAAGACCTGTTCATATCAACCATAAGCTAAGTTGGTTTTCGTTCTCCCTAGATTGGTTTTGTTAATAATATACCCATATCATTCAACAACAATAGGTGAATATTTTATAACAAAAGCCTCTACAAAAATCACTCCAAGACACTCGCAGATATGGAATTTGCTCGGCATGATCATTATATATCTCCGGTAGTTCACCTGTACATCCTCTATCGCCTTAGGTACTGAAAATTCCAAACATATCACATCGTTATTCAACCGAAGATAGAAGGTGGTTGAATCTTCCCAAGTTTTAGACACTCAACTAGTTCGAACCCTTCATCTTCATTCGACGGCATGATCAAGCATGCTTGAATAGTTTCATACTCAGCCAATGGAAATAAACGGCAACGTAAAGGATAGGTAATGTCAAGGGCACAAGGAGACAGTAATGCCTAATAAGAAAGAAGAAACGCATTACAGATAAAGGTCACTGTTGATCAATACTAGTGTAAGAAACAAGTTACCATATTAGTTTACTTAGACTTGATCTTTTCAAGAGATCAATGGCACCAATACTAAACCAGTTTTCATAAAAATGTGGAACAAGAACTTGGTTTGCTTCAAAGGCAAGCTAGTACTCCGATGTATACATAGTCATTCTCATTCATTCTCTAGTATGGATGGCAGCATTTTGTCATCCATATATATTATGGCTGTTTGAATATCAAAACAGTTGAGTCATGAGTTATTTCCATTAACCACCACAGCATCTCTAAGAGAAACTGATTCCTAGGTCCCATTTACAACCACTTTGTTTTTGAAACTATATTGGTTTACAAGTTTTGTTGCCTACAAAAACTTGCTTTTCTTTTTGCAAAATTAGCTAAAAATTCAAAGGTCGAACATAGGAATTGTGAAATCATGAACAAGAAATGGTGAGAAAACAGAATGATTTTAAAAAATTAGAAATAAAAAACCAAATGGTTAATGTACAGCCTACAAGTTAGTATGATATGTTCTATTCGGCCCTGGTCTTTCTCTTCCTTCACATTGATCAACTAATCAGATTTGCTTTGATCTTAATTCGGTACACAATACCTTTCCCCTCTCCAAATCAAGATCAAACCCAGAATTCAAGTAAAAAAAAACAGAAACTAACACTAACACTTCAATACAACCTTCTATTTTTTCCAGAATAACAACGCAAAGAACCTAATTGTGGACTAGACTAGACACAACAAAGATAATTAGAAAAGTTTTACCAGTCGTTTTGAATAGCAGATAAGAAGGCGTTGTTTGAAGGTGGAAGAAGCTTGGAAATAAAGGCGGCATAGAGAAATATTAGAAGAAATAAGAAGCTGACGACGACGAACAAAACCCCTTGCCGCCGACCAACTGTTTCTTCTCTGGGAATCAACGATCTGATCGAACTCATCTCTTCAAATTTACCCAATG

mRNA sequence

ATGAATCAAAATTTAAAACATACCGATCATTCATTGATAAAAAAAAAAAAAAAAAAGAAAACAAGAACCAATCAGAGTAGAAAAAAGAAAAAAATGGGATTGATATCAAACATTGTGGCAATATTGCCATTGTTGTTATTGTTGGTGTCTAATTCTAAAGCTCAACCTGCTGCAGCTCAACCTTCAGCTCAACCAGCTCAACCTGCAGGTGATGCTGGTGGTGTTTTCGATATCACAAAATACGGTGCCAAACCTAATGCAGATATAACTGCGGCATTGACAAGTGCATGGAAGGAGGCATGTGCATCGACCACTCCAAGTAAAGTTTTGATTCCAAAAGGAAGTTACGGATTAAGTCAATCCAACCTTAAAGGCCCTTGTAAAAGTCCTATCGAACTACAAATCGAAGGGACATTACAAGCTCCGGCCCATCCAGAAGGAGAAGGGCTACTCATTTTGGAAAATACCGATCTGTTGACAGTGTCAGGTACTGGAGTTTTGGATGGCCAAGGAAAAGCAGGTTGGGAAAAGAATGATTGCCATTTGAAGAAAGAATGCACCAAGCTTCCCATGAATTTGAAGCTCAATTTCATCACAAATTCAATAGTAACGGGCATAACGTCATTGGATAGCAAGAATTTTCATATTAATCTTTTGGGTTGCAAGAACCTTACCTTTGACCACGTGACAATTACTGCACCGGGCAATAGTCCCAACACCGATGGAATTCACGTGAGTAGTTCAGAACAGATTAACATTCTCAATACCAATATCGCAACCGGAGATGATTGCATATCTGTGGGAGATTCCAACAAACAAGTAGCTATTAGCGATGTTACTTGCGGACCAGGACATGGAATTAGCATAGGAAGTTTGGGAAAATATACCAAGGAAAAAGAAGTGGTAGGAGTTACGGTGAAAAAATGCAAATTGACCGGTACTACAAACGGTGTTAGGATCAAAACATGGCCAGATTCTGCCGTCGCATTTCCAGCCACAGACATGCATTTTGAAGATATAGAAATGGATAATGTCAGTAACCCTATCATCATAGACCAAGAATATTGTCCATGGAACCAATGCAACCGAAAGGTTGCATCAAAAATTAAGATCAGCAATGTAAGCTTCAAGAATATTAGAGGCACGTCTGCAACTGCGATTGCAGTCAAAATTGTTTGCAGTAAGAGTATTCCATGTGAGGGAGTGGAAATTGCTGATATTGACCTCACTTATAGTGGACCAGAAGGTCCAATTAAGTCTCAGTGTGCAAATGTGAAACCCGTCATTACAGGAAAACAAAATCCTCCAATCTGTGGTGAAGTTGCACCAGCTGATGGTCCATCAACCGATTGA

Coding sequence (CDS)

ATGAATCAAAATTTAAAACATACCGATCATTCATTGATAAAAAAAAAAAAAAAAAAGAAAACAAGAACCAATCAGAGTAGAAAAAAGAAAAAAATGGGATTGATATCAAACATTGTGGCAATATTGCCATTGTTGTTATTGTTGGTGTCTAATTCTAAAGCTCAACCTGCTGCAGCTCAACCTTCAGCTCAACCAGCTCAACCTGCAGGTGATGCTGGTGGTGTTTTCGATATCACAAAATACGGTGCCAAACCTAATGCAGATATAACTGCGGCATTGACAAGTGCATGGAAGGAGGCATGTGCATCGACCACTCCAAGTAAAGTTTTGATTCCAAAAGGAAGTTACGGATTAAGTCAATCCAACCTTAAAGGCCCTTGTAAAAGTCCTATCGAACTACAAATCGAAGGGACATTACAAGCTCCGGCCCATCCAGAAGGAGAAGGGCTACTCATTTTGGAAAATACCGATCTGTTGACAGTGTCAGGTACTGGAGTTTTGGATGGCCAAGGAAAAGCAGGTTGGGAAAAGAATGATTGCCATTTGAAGAAAGAATGCACCAAGCTTCCCATGAATTTGAAGCTCAATTTCATCACAAATTCAATAGTAACGGGCATAACGTCATTGGATAGCAAGAATTTTCATATTAATCTTTTGGGTTGCAAGAACCTTACCTTTGACCACGTGACAATTACTGCACCGGGCAATAGTCCCAACACCGATGGAATTCACGTGAGTAGTTCAGAACAGATTAACATTCTCAATACCAATATCGCAACCGGAGATGATTGCATATCTGTGGGAGATTCCAACAAACAAGTAGCTATTAGCGATGTTACTTGCGGACCAGGACATGGAATTAGCATAGGAAGTTTGGGAAAATATACCAAGGAAAAAGAAGTGGTAGGAGTTACGGTGAAAAAATGCAAATTGACCGGTACTACAAACGGTGTTAGGATCAAAACATGGCCAGATTCTGCCGTCGCATTTCCAGCCACAGACATGCATTTTGAAGATATAGAAATGGATAATGTCAGTAACCCTATCATCATAGACCAAGAATATTGTCCATGGAACCAATGCAACCGAAAGGTTGCATCAAAAATTAAGATCAGCAATGTAAGCTTCAAGAATATTAGAGGCACGTCTGCAACTGCGATTGCAGTCAAAATTGTTTGCAGTAAGAGTATTCCATGTGAGGGAGTGGAAATTGCTGATATTGACCTCACTTATAGTGGACCAGAAGGTCCAATTAAGTCTCAGTGTGCAAATGTGAAACCCGTCATTACAGGAAAACAAAATCCTCCAATCTGTGGTGAAGTTGCACCAGCTGATGGTCCATCAACCGATTGA

Protein sequence

MNQNLKHTDHSLIKKKKKKKTRTNQSRKKKKMGLISNIVAILPLLLLLVSNSKAQPAAAQPSAQPAQPAGDAGGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLLILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDMHFEDIEMDNVSNPIIIDQEYCPWNQCNRKVASKIKISNVSFKNIRGTSATAIAVKIVCSKSIPCEGVEIADIDLTYSGPEGPIKSQCANVKPVITGKQNPPICGEVAPADGPSTD*

Homology

[Close]

BLAST of CsaV3_6G039220 vs. NCBI nr
Match: KAE8647377.1 (hypothetical protein Csa_004085 [Cucumis sativus])

HSP 1 Score: 892.1 bits (2304), Expect = 2.0e-255
Identity = 450/450 (100.00%), Postives = 450/450 (100.00%), Query Frame = 0


Query: 1   MNQNLKHTDHSLIKKKKKKKTRTNQSRKKKKMGLISNIVAILPLLLLLVSNSKAQPAAAQ 60
           MNQNLKHTDHSLIKKKKKKKTRTNQSRKKKKMGLISNIVAILPLLLLLVSNSKAQPAAAQ
Sbjct: 1   MNQNLKHTDHSLIKKKKKKKTRTNQSRKKKKMGLISNIVAILPLLLLLVSNSKAQPAAAQ 60

Query: 61  PSAQPAQPAGDAGGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQ 120
           PSAQPAQPAGDAGGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQ
Sbjct: 61  PSAQPAQPAGDAGGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQ 120

Query: 121 SNLKGPCKSPIELQIEGTLQAPAHPEGEGLLILENTDLLTVSGTGVLDGQGKAGWEKNDC 180
           SNLKGPCKSPIELQIEGTLQAPAHPEGEGLLILENTDLLTVSGTGVLDGQGKAGWEKNDC
Sbjct: 121 SNLKGPCKSPIELQIEGTLQAPAHPEGEGLLILENTDLLTVSGTGVLDGQGKAGWEKNDC 180

Query: 181 HLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNT 240
           HLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNT
Sbjct: 181 HLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNT 240

Query: 241 DGIHVSSSEQINILNTNIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKE 300
           DGIHVSSSEQINILNTNIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKE
Sbjct: 241 DGIHVSSSEQINILNTNIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKE 300

Query: 301 VVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDMHFEDIEMDNVSNPIIIDQEYCPWNQ 360
           VVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDMHFEDIEMDNVSNPIIIDQEYCPWNQ
Sbjct: 301 VVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDMHFEDIEMDNVSNPIIIDQEYCPWNQ 360

Query: 361 CNRKVASKIKISNVSFKNIRGTSATAIAVKIVCSKSIPCEGVEIADIDLTYSGPEGPIKS 420
           CNRKVASKIKISNVSFKNIRGTSATAIAVKIVCSKSIPCEGVEIADIDLTYSGPEGPIKS
Sbjct: 361 CNRKVASKIKISNVSFKNIRGTSATAIAVKIVCSKSIPCEGVEIADIDLTYSGPEGPIKS 420

Query: 421 QCANVKPVITGKQNPPICGEVAPADGPSTD 451
           QCANVKPVITGKQNPPICGEVAPADGPSTD
Sbjct: 421 QCANVKPVITGKQNPPICGEVAPADGPSTD 450

[Close]

BLAST of CsaV3_6G039220 vs. NCBI nr
Match: XP_031742831.1 (exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 889.8 bits (2298), Expect = 9.8e-255
Identity = 449/450 (99.78%), Postives = 449/450 (99.78%), Query Frame = 0


Query: 1   MNQNLKHTDHSLIKKKKKKKTRTNQSRKKKKMGLISNIVAILPLLLLLVSNSKAQPAAAQ 60
           MNQNLKHTDHSLIKKKKKKKTRTNQSRKKKKMGLISNIVAILPLLLLLVSNSKAQPAAAQ
Sbjct: 1   MNQNLKHTDHSLIKKKKKKKTRTNQSRKKKKMGLISNIVAILPLLLLLVSNSKAQPAAAQ 60

Query: 61  PSAQPAQPAGDAGGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQ 120
           PSAQPAQPAGDAGGVFDITKYGAKPNADITAALTSAWK ACASTTPSKVLIPKGSYGLSQ
Sbjct: 61  PSAQPAQPAGDAGGVFDITKYGAKPNADITAALTSAWKAACASTTPSKVLIPKGSYGLSQ 120

Query: 121 SNLKGPCKSPIELQIEGTLQAPAHPEGEGLLILENTDLLTVSGTGVLDGQGKAGWEKNDC 180
           SNLKGPCKSPIELQIEGTLQAPAHPEGEGLLILENTDLLTVSGTGVLDGQGKAGWEKNDC
Sbjct: 121 SNLKGPCKSPIELQIEGTLQAPAHPEGEGLLILENTDLLTVSGTGVLDGQGKAGWEKNDC 180

Query: 181 HLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNT 240
           HLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNT
Sbjct: 181 HLKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNT 240

Query: 241 DGIHVSSSEQINILNTNIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKE 300
           DGIHVSSSEQINILNTNIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKE
Sbjct: 241 DGIHVSSSEQINILNTNIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKE 300

Query: 301 VVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDMHFEDIEMDNVSNPIIIDQEYCPWNQ 360
           VVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDMHFEDIEMDNVSNPIIIDQEYCPWNQ
Sbjct: 301 VVGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDMHFEDIEMDNVSNPIIIDQEYCPWNQ 360

Query: 361 CNRKVASKIKISNVSFKNIRGTSATAIAVKIVCSKSIPCEGVEIADIDLTYSGPEGPIKS 420
           CNRKVASKIKISNVSFKNIRGTSATAIAVKIVCSKSIPCEGVEIADIDLTYSGPEGPIKS
Sbjct: 361 CNRKVASKIKISNVSFKNIRGTSATAIAVKIVCSKSIPCEGVEIADIDLTYSGPEGPIKS 420

Query: 421 QCANVKPVITGKQNPPICGEVAPADGPSTD 451
           QCANVKPVITGKQNPPICGEVAPADGPSTD
Sbjct: 421 QCANVKPVITGKQNPPICGEVAPADGPSTD 450

[Close]

BLAST of CsaV3_6G039220 vs. NCBI nr
Match: XP_011657634.1 (exopolygalacturonase [Cucumis sativus])

HSP 1 Score: 836.3 bits (2159), Expect = 1.3e-238
Identity = 418/419 (99.76%), Postives = 418/419 (99.76%), Query Frame = 0


Query: 32  MGLISNIVAILPLLLLLVSNSKAQPAAAQPSAQPAQPAGDAGGVFDITKYGAKPNADITA 91
           MGLISNIVAILPLLLLLVSNSKAQPAAAQPSAQPAQPAG AGGVFDITKYGAKPNADITA
Sbjct: 1   MGLISNIVAILPLLLLLVSNSKAQPAAAQPSAQPAQPAGGAGGVFDITKYGAKPNADITA 60

Query: 92  ALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLL 151
           ALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLL
Sbjct: 61  ALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLL 120

Query: 152 ILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDS 211
           ILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDS
Sbjct: 121 ILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDS 180

Query: 212 KNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSN 271
           KNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSN
Sbjct: 181 KNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSN 240

Query: 272 KQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFP 331
           KQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFP
Sbjct: 241 KQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFP 300

Query: 332 ATDMHFEDIEMDNVSNPIIIDQEYCPWNQCNRKVASKIKISNVSFKNIRGTSATAIAVKI 391
           ATDMHFEDIEMDNVSNPIIIDQEYCPWNQCNRKVASKIKISNVSFKNIRGTSATAIAVKI
Sbjct: 301 ATDMHFEDIEMDNVSNPIIIDQEYCPWNQCNRKVASKIKISNVSFKNIRGTSATAIAVKI 360

Query: 392 VCSKSIPCEGVEIADIDLTYSGPEGPIKSQCANVKPVITGKQNPPICGEVAPADGPSTD 451
           VCSKSIPCEGVEIADIDLTYSGPEGPIKSQCANVKPVITGKQNPPICGEVAPADGPSTD
Sbjct: 361 VCSKSIPCEGVEIADIDLTYSGPEGPIKSQCANVKPVITGKQNPPICGEVAPADGPSTD 419

[Close]

BLAST of CsaV3_6G039220 vs. NCBI nr
Match: XP_031742832.1 (exopolygalacturonase-like [Cucumis sativus] >XP_031742833.1 exopolygalacturonase-like [Cucumis sativus] >XP_031742834.1 exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 835.1 bits (2156), Expect = 2.9e-238
Identity = 416/419 (99.28%), Postives = 418/419 (99.76%), Query Frame = 0


Query: 32  MGLISNIVAILPLLLLLVSNSKAQPAAAQPSAQPAQPAGDAGGVFDITKYGAKPNADITA 91
           MGLISN+VA+LPLLLLLVSNSKAQPAAAQPSAQPAQPAG AGGVFDITKYGAKPNADITA
Sbjct: 1   MGLISNVVALLPLLLLLVSNSKAQPAAAQPSAQPAQPAGGAGGVFDITKYGAKPNADITA 60

Query: 92  ALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLL 151
           ALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLL
Sbjct: 61  ALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLL 120

Query: 152 ILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDS 211
           ILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDS
Sbjct: 121 ILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDS 180

Query: 212 KNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSN 271
           KNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSN
Sbjct: 181 KNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSN 240

Query: 272 KQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFP 331
           KQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFP
Sbjct: 241 KQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFP 300

Query: 332 ATDMHFEDIEMDNVSNPIIIDQEYCPWNQCNRKVASKIKISNVSFKNIRGTSATAIAVKI 391
           ATDMHFEDIEMDNVSNPIIIDQEYCPWNQCNRKVASKIKISNVSFKNIRGTSATAIAVKI
Sbjct: 301 ATDMHFEDIEMDNVSNPIIIDQEYCPWNQCNRKVASKIKISNVSFKNIRGTSATAIAVKI 360

Query: 392 VCSKSIPCEGVEIADIDLTYSGPEGPIKSQCANVKPVITGKQNPPICGEVAPADGPSTD 451
           VCSKSIPCEGVEIADIDLTYSGPEGPIKSQCANVKPVITGKQNPPICGEVAPADGPSTD
Sbjct: 361 VCSKSIPCEGVEIADIDLTYSGPEGPIKSQCANVKPVITGKQNPPICGEVAPADGPSTD 419

[Close]

BLAST of CsaV3_6G039220 vs. NCBI nr
Match: XP_031742970.1 (exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 834.3 bits (2154), Expect = 4.9e-238
Identity = 416/419 (99.28%), Postives = 418/419 (99.76%), Query Frame = 0


Query: 32  MGLISNIVAILPLLLLLVSNSKAQPAAAQPSAQPAQPAGDAGGVFDITKYGAKPNADITA 91
           MGLISN+VAILPLLLLLVSNSKAQPAAAQPSA+PAQPAG AGGVFDITKYGAKPNADITA
Sbjct: 1   MGLISNVVAILPLLLLLVSNSKAQPAAAQPSAKPAQPAGGAGGVFDITKYGAKPNADITA 60

Query: 92  ALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLL 151
           ALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLL
Sbjct: 61  ALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLL 120

Query: 152 ILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDS 211
           ILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDS
Sbjct: 121 ILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDS 180

Query: 212 KNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSN 271
           KNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSN
Sbjct: 181 KNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSN 240

Query: 272 KQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFP 331
           KQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFP
Sbjct: 241 KQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFP 300

Query: 332 ATDMHFEDIEMDNVSNPIIIDQEYCPWNQCNRKVASKIKISNVSFKNIRGTSATAIAVKI 391
           ATDMHFEDIEMDNVSNPIIIDQEYCPWNQCNRKVASKIKISNVSFKNIRGTSATAIAVKI
Sbjct: 301 ATDMHFEDIEMDNVSNPIIIDQEYCPWNQCNRKVASKIKISNVSFKNIRGTSATAIAVKI 360

Query: 392 VCSKSIPCEGVEIADIDLTYSGPEGPIKSQCANVKPVITGKQNPPICGEVAPADGPSTD 451
           VCSKSIPCEGVEIADIDLTYSGPEGPIKSQCANVKPVITGKQNPPICGEVAPADGPSTD
Sbjct: 361 VCSKSIPCEGVEIADIDLTYSGPEGPIKSQCANVKPVITGKQNPPICGEVAPADGPSTD 419

[Close]

BLAST of CsaV3_6G039220 vs. ExPASy Swiss-Prot
Match: Q05967 (Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 1.1e-123
Identity = 216/369 (58.54%), Postives = 273/369 (73.98%), Query Frame = 0


Query: 74  GVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIEL 133
           GVFDITKYGA  NADI+ AL +A+KEAC ST+PS ++IPKG++ ++Q  L+GPCKSP+EL
Sbjct: 25  GVFDITKYGANSNADISEALLNAFKEACQSTSPSTIVIPKGTFTMNQVKLEGPCKSPLEL 84

Query: 134 QIEGTLQAPAHPE----GEGLLILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKL 193
           QI+ TL+AP+ P     GE L +    D  T+SG G+LDGQ  A WE   C   K+C KL
Sbjct: 85  QIQATLKAPSDPSQLKVGEWLTV-NKLDQFTMSGGGILDGQAAAAWE---CKQSKKCNKL 144

Query: 194 PMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSE 253
           P NL  N +TNS +  IT+LDSK+FH+N+  CKNLTF    ++AP NSPNTDGIHVS S 
Sbjct: 145 PNNLSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPANSPNTDGIHVSRSS 204

Query: 254 QINILNTNIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKC 313
            +NI ++N +TGDDCISVGD  +Q+ I+ VTCGPGHGIS+GSLG    EK VVGV V+ C
Sbjct: 205 SVNITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGISVGSLGGNPDEKPVVGVFVRNC 264

Query: 314 KLTGTTNGVRIKTWPDSAVAFPATDMHFEDIEMDNVSNPIIIDQEYCPWNQCNRKVASKI 373
             T T NGVRIKTWP S       D+HFEDI + NVSNP++IDQ YCP+N+CN+ + S++
Sbjct: 265 TFTNTDNGVRIKTWPASHPGV-VNDVHFEDIIVQNVSNPVVIDQVYCPFNKCNKDLPSQV 324

Query: 374 KISNVSFKNIRGTSATAIAVKIVCSKSIPCEGVEIADIDLTYSGPEGPIKSQCANVKPVI 433
           KIS VSF+NI+GTS T  AV ++ SK +PCEG+E+ DID+TYSG EGP KS C N+KP +
Sbjct: 325 KISKVSFQNIKGTSRTQDAVSLLRSKGVPCEGIEVGDIDITYSGKEGPAKSSCENIKPSL 384

Query: 434 TGKQNPPIC 439
            GKQNPP+C
Sbjct: 385 KGKQNPPVC 388

[Close]

BLAST of CsaV3_6G039220 vs. ExPASy Swiss-Prot
Match: Q40312 (Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 3.0e-121
Identity = 210/373 (56.30%), Postives = 271/373 (72.65%), Query Frame = 0


Query: 74  GVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIEL 133
           GV DI+K+G KPN+DI  ALTSAW EACASTT +K++IP G+Y L+   LKGPCK+PIEL
Sbjct: 23  GVLDISKFGGKPNSDIGQALTSAWNEACASTTAAKIVIPAGTYQLNGIELKGPCKAPIEL 82

Query: 134 QIEGTLQAPAHPE----GEGLLILENTDLLTVSGTGVLDGQGKAGWEK----NDCHLKKE 193
           Q++GT+QAPA P      E        D LT+SG GV DGQG   ++K    +    K  
Sbjct: 83  QVDGTIQAPADPSVIKGTEQWFKFLYMDHLTLSGKGVFDGQGATVYKKAAPASAWSGKNS 142

Query: 194 CTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHV 253
            +K+ MN   NF+ NSIV G+TS DSKNFH+ + GCKN+TFD  TITAPG+SPNTDGIH+
Sbjct: 143 NSKVFMNFGFNFVNNSIVRGVTSKDSKNFHVMVFGCKNITFDGFTITAPGDSPNTDGIHM 202

Query: 254 SSSEQINILNTNIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVT 313
             S  + ILNTNI TGDDC+S+GD +KQ+ +  V CGPGHG+S+GSLGK+T E+ V G+T
Sbjct: 203 GKSTDVKILNTNIGTGDDCVSIGDGSKQITVQGVNCGPGHGLSVGSLGKFTTEENVEGIT 262

Query: 314 VKKCKLTGTTNGVRIKTWPDSAVAFPATDMHFEDIEMDNVSNPIIIDQEYCPWNQCNRKV 373
           VK C LT T NGVRIKTWPD+      +D+HFEDI M NV NP+IIDQEY PWNQC++K 
Sbjct: 263 VKNCTLTATDNGVRIKTWPDAPGTITVSDIHFEDITMTNVKNPVIIDQEYYPWNQCSKKN 322

Query: 374 ASKIKISNVSFKNIRGTSATAIAVKIVCSKSIPCEGVEIADIDLTYSGPEGPIKSQCANV 433
            SKIK+S +SFKN++GTS TA  V ++CS ++PC+GVE+ ++DL ++G   P  ++C NV
Sbjct: 323 PSKIKLSKISFKNVKGTSGTAEGVVLICSSAVPCDGVELNNVDLKFNG--APTTAKCTNV 382

Query: 434 KPVITGKQNPPIC 439
           KP++TG    P+C
Sbjct: 383 KPLVTG--TAPVC 391

[Close]

BLAST of CsaV3_6G039220 vs. ExPASy Swiss-Prot
Match: P24548 (Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 8.6e-121
Identity = 211/362 (58.29%), Postives = 268/362 (74.03%), Query Frame = 0


Query: 88  DITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHP-- 147
           D T ALT+AWKEACAS +PS +L+PKG++ +    L+GPCKS I LQ++GTL+APA P  
Sbjct: 1   DSTQALTTAWKEACASASPSTILVPKGNFAVGLITLEGPCKSSIGLQLQGTLKAPADPSK 60

Query: 148 -EGEGLLILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKE-CTKLPMNLKLNFITNSIV 207
            +G G + L   DLLT+ G GV DGQGK+ W +NDCH     C  L MNL+L  +TNSI+
Sbjct: 61  IKGLGWINLNKIDLLTIFGGGVFDGQGKSAWVQNDCHKNGPICKTLSMNLRLYAVTNSIL 120

Query: 208 TGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDD 267
             +T+LDSKNFH+N++GCKNLTF+   I+A   S NTDGIH+  S+ +NI+NT I TGDD
Sbjct: 121 RDVTTLDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGVNIINTEIKTGDD 180

Query: 268 CISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTW 327
           CIS+GD +K + I+++TCGPGHGIS+GSLG+Y  E+ VVG+ VK C +TG+ NGVRIKTW
Sbjct: 181 CISLGDGSKNINITNITCGPGHGISVGSLGRYKNEESVVGIYVKNCTITGSQNGVRIKTW 240

Query: 328 PDSAVAFPATDMHFEDIEMDNVSNPIIIDQEYCPWNQCNRKVASKIKISNVSFKNIRGTS 387
           P S     A++MHF+DI M++V  PI+IDQ YCP+NQC  +V S +K+S +SFKNI+GTS
Sbjct: 241 PKSEPG-EASEMHFQDITMNSVGTPILIDQGYCPYNQCTAEVPSSVKLSKISFKNIKGTS 300

Query: 388 ATAIAVKIVCSKSIPCEGVEIADIDLTYSGPEGPIKSQCANVKPVITGKQNPPIC-GEVA 445
            T  AVK+VCSKS PC GVE+ADIDLTYSG  GP  S C N+KP I GKQ P IC G  A
Sbjct: 301 TTKEAVKLVCSKSFPCNGVELADIDLTYSGKGGPATSVCENIKPTIKGKQIPAICSGSAA 360

[Close]

BLAST of CsaV3_6G039220 vs. ExPASy Swiss-Prot
Match: Q6H9K0 (Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 2.7e-114
Identity = 200/370 (54.05%), Postives = 263/370 (71.08%), Query Frame = 0


Query: 72  AGGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCK-SP 131
           +G VF++  YGAK   DI+ A+  AWK ACAS  PS VLIPKG+Y + +  ++GPCK S 
Sbjct: 6   SGSVFNVNDYGAKGAGDISQAVMKAWKAACASQGPSTVLIPKGNYNMGEVAMQGPCKGSK 65

Query: 132 IELQIEGTLQAPAHP---EGEGLLILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECT 191
           I  QI+G ++APA P   + +G +     D LTVSGTG LDGQG+  W KN+C     C 
Sbjct: 66  IGFQIDGVVKAPADPSKFKSDGWVSFYRIDGLTVSGTGTLDGQGQTAWAKNNCDKNPNCK 125

Query: 192 KLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSS 251
              MNL+ +F+ +++V  ITSL+SK FHIN+L C+++TF HVT+TAPG S NTDGIHV  
Sbjct: 126 HAAMNLRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIHVGI 185

Query: 252 SEQINILNTNIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVK 311
           S+ + I NT IATGDDCIS+G  ++ V I+ V CGPGHGISIGSLG+Y  EKEV G+TVK
Sbjct: 186 SKGVTITNTKIATGDDCISIGPGSQNVTITQVNCGPGHGISIGSLGRYNNEKEVRGITVK 245

Query: 312 KCKLTGTTNGVRIKTWPDSAVAFPATDMHFEDIEMDNVSNPIIIDQEYCPWNQCNRKVAS 371
            C  +GT NGVR+KTWP+S     ATD+ F+D+ M+NV NP+I+DQEYCP+ QC+R+  S
Sbjct: 246 GCTFSGTMNGVRVKTWPNSPPG-AATDLTFQDLTMNNVQNPVILDQEYCPYGQCSRQAPS 305

Query: 372 KIKISNVSFKNIRGTSATAIAVKIVCSKSIPCEGVEIADIDLTYSGPEGPIKSQCANVKP 431
           +IK+SN++F NIRGTS   +AV I CS  +PC  ++I +I+L+Y G  GP  S C+NVKP
Sbjct: 306 RIKLSNINFNNIRGTSTGKVAVVIACSHGMPCSNMKIGEINLSYRGAGGPATSTCSNVKP 365

Query: 432 VITGKQNPPI 438
             +GKQ P I
Sbjct: 366 TFSGKQVPAI 374

[Close]

BLAST of CsaV3_6G039220 vs. ExPASy Swiss-Prot
Match: Q39766 (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 3.0e-113
Identity = 207/420 (49.29%), Postives = 282/420 (67.14%), Query Frame = 0


Query: 37  NIV-AILPLLLLLVSNSKAQPAAAQPSAQPAQPAGDAGGVFD-ITKYGAKPN--ADITAA 96
           NIV ++  LLLL +S SK QP A                 FD + K+GAK +   D++  
Sbjct: 6   NIVPSMFVLLLLFISASKVQPDA-----------------FDVVAKFGAKADGKTDLSKP 65

Query: 97  LTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHP---EGEG 156
              AWKEACAS TPS V+IPKG+Y LS+ NL+GPCK+PIE+ ++GT+QAPA P   +   
Sbjct: 66  FLDAWKEACASVTPSTVVIPKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPN 125

Query: 157 LLILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSL 216
            +   + +   + G G+ DGQG   +EKN C  ++  +KLP+N++ +F+TN+++  ITS 
Sbjct: 126 WVRFYSVENFKMFGGGIFDGQGSIAYEKNTCENREFRSKLPVNIRFDFVTNALIQDITSK 185

Query: 217 DSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGD 276
           DSK FHIN+  CKN+T + + I AP  SPNTDGIH+  SE +NI+ ++I TGDDCIS+GD
Sbjct: 186 DSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGD 245

Query: 277 SNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVA 336
             K + I ++TCGPGHGISIGSLGK+  E+ V G+ +  C +T T+NG RIKTWP     
Sbjct: 246 GTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEH-G 305

Query: 337 FPATDMHFEDIEMDNVSNPIIIDQEYCPWNQCNRKVASKIKISNVSFKNIRGTSATAIAV 396
              +++HFEDI M+NVS+PI+IDQ+YCPWN+C +   SK+K+SN+SFKNIRGTSA   A+
Sbjct: 306 GAVSEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAI 365

Query: 397 KIVCSKSIPCEGVEIADIDLTYSGPEGPIKSQCANVKPVITGKQNPPICGEVAPADGPST 450
           K +CS S PC+ VE+ADID+ ++G E P  SQC NVKP+  GK NP  C    P    +T
Sbjct: 366 KFICSGSSPCQNVELADIDIQHNGAE-PATSQCLNVKPITIGKLNPIPCSGPVPKTPSAT 406

[Close]

BLAST of CsaV3_6G039220 vs. ExPASy TrEMBL
Match: A0A5A7TRZ0 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00600 PE=3 SV=1)

HSP 1 Score: 734.9 bits (1896), Expect = 1.9e-208
Identity = 366/419 (87.35%), Postives = 384/419 (91.65%), Query Frame = 0


Query: 32  MGLISNIVAILPLLLLLVSNSKAQPAAAQPSAQPAQPAGDAGGVFDITKYGAKPNADITA 91
           MGLISN V +LP+LLLLVSNSKAQ                +GGVFDITKYGAKPNAD+TA
Sbjct: 1   MGLISNFVTLLPVLLLLVSNSKAQ---------------SSGGVFDITKYGAKPNADVTA 60

Query: 92  ALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLL 151
           AL SAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKS IELQIEGTLQAPA P+G+GLL
Sbjct: 61  ALASAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKGDGLL 120

Query: 152 ILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDS 211
           +LE  D LTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNF+TNSIV  ITSLDS
Sbjct: 121 LLEYVDQLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFVTNSIVKDITSLDS 180

Query: 212 KNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSN 271
           KN+HINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGD+N
Sbjct: 181 KNYHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTN 240

Query: 272 KQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFP 331
           KQV ISDVTCGPGHGISIGSLGKY+KEKEVVGVTVKKCKLT TTNGVRIKTWPDSAVAFP
Sbjct: 241 KQVVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCKLTDTTNGVRIKTWPDSAVAFP 300

Query: 332 ATDMHFEDIEMDNVSNPIIIDQEYCPWNQCNRKVASKIKISNVSFKNIRGTSATAIAVKI 391
           A+DMHFEDIEM NVSNP+IIDQEYCPWNQCNRKV SKIKISNVSFKNIRGTSAT +AVKI
Sbjct: 301 ASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISNVSFKNIRGTSATPVAVKI 360

Query: 392 VCSKSIPCEGVEIADIDLTYSGPEGPIKSQCANVKPVITGKQNPPICGEVAPADGPSTD 451
           VCS+S PCEGVE+ADIDLTYSG EGPIKSQCANVKPVI+GKQNPPICGE APA GPS+D
Sbjct: 361 VCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVISGKQNPPICGEPAPAGGPSSD 404

[Close]

BLAST of CsaV3_6G039220 vs. ExPASy TrEMBL
Match: A0A5D3DYI3 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold303G00050 PE=3 SV=1)

HSP 1 Score: 734.2 bits (1894), Expect = 3.3e-208
Identity = 366/419 (87.35%), Postives = 384/419 (91.65%), Query Frame = 0


Query: 32  MGLISNIVAILPLLLLLVSNSKAQPAAAQPSAQPAQPAGDAGGVFDITKYGAKPNADITA 91
           MGLISN VA+LP+LLLLVSNSKAQ                +G VFDITKYGAKPNAD+TA
Sbjct: 1   MGLISNFVALLPVLLLLVSNSKAQ---------------SSGSVFDITKYGAKPNADVTA 60

Query: 92  ALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLL 151
           AL SAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKS IELQIEGTLQAPA P+G+GLL
Sbjct: 61  ALVSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKGDGLL 120

Query: 152 ILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDS 211
           +LE  D LTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNF+TNSIV  ITSLDS
Sbjct: 121 LLEYVDQLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFVTNSIVKDITSLDS 180

Query: 212 KNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSN 271
           KN+HINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGD+N
Sbjct: 181 KNYHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTN 240

Query: 272 KQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFP 331
           KQV ISDVTCGPGHGISIGSLGKY+KEKEVVGVTVKKCKLT TTNGVRIKTWPDSAVAFP
Sbjct: 241 KQVVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCKLTDTTNGVRIKTWPDSAVAFP 300

Query: 332 ATDMHFEDIEMDNVSNPIIIDQEYCPWNQCNRKVASKIKISNVSFKNIRGTSATAIAVKI 391
           A+DMHFEDIEM NVSNP+IIDQEYCPWNQCNRKV SKIKISNVSFKNIRGTSAT +AVKI
Sbjct: 301 ASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISNVSFKNIRGTSATPVAVKI 360

Query: 392 VCSKSIPCEGVEIADIDLTYSGPEGPIKSQCANVKPVITGKQNPPICGEVAPADGPSTD 451
           VCS+S PCEGVE+ADIDLTYSG EGPIKSQCANVKPVI+GKQNPPICGE APA GPS+D
Sbjct: 361 VCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVISGKQNPPICGEPAPAGGPSSD 404

[Close]

BLAST of CsaV3_6G039220 vs. ExPASy TrEMBL
Match: A0A5A7TR51 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G00990 PE=3 SV=1)

HSP 1 Score: 733.4 bits (1892), Expect = 5.7e-208
Identity = 366/419 (87.35%), Postives = 384/419 (91.65%), Query Frame = 0


Query: 32  MGLISNIVAILPLLLLLVSNSKAQPAAAQPSAQPAQPAGDAGGVFDITKYGAKPNADITA 91
           MGLISN VA+L +LLLLVSNSKAQ                +GGVFDITKYGAKPNAD+TA
Sbjct: 1   MGLISNFVALLSVLLLLVSNSKAQ---------------SSGGVFDITKYGAKPNADVTA 60

Query: 92  ALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLL 151
           AL SAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKS IELQIEGTLQAPA P+G+GLL
Sbjct: 61  ALASAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKGDGLL 120

Query: 152 ILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDS 211
           +LE  D LTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNF+TNSIV  ITSLDS
Sbjct: 121 LLEYVDQLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFVTNSIVKDITSLDS 180

Query: 212 KNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSN 271
           KN+HINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGD+N
Sbjct: 181 KNYHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTN 240

Query: 272 KQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFP 331
           KQV ISDVTCGPGHGISIGSLGKY+KEKEVVGVTVKKCKLT TTNGVRIKTWPDSAVAFP
Sbjct: 241 KQVVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCKLTDTTNGVRIKTWPDSAVAFP 300

Query: 332 ATDMHFEDIEMDNVSNPIIIDQEYCPWNQCNRKVASKIKISNVSFKNIRGTSATAIAVKI 391
           A+DMHFEDIEM NVSNP+IIDQEYCPWNQCNRKV SKIKISNVSFKNIRGTSAT +AVKI
Sbjct: 301 ASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISNVSFKNIRGTSATPVAVKI 360

Query: 392 VCSKSIPCEGVEIADIDLTYSGPEGPIKSQCANVKPVITGKQNPPICGEVAPADGPSTD 451
           VCS+S PCEGVE+ADIDLTYSG EGPIKSQCANVKPVI+GKQNPPICGE APA GPS+D
Sbjct: 361 VCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVISGKQNPPICGEPAPAGGPSSD 404

[Close]

BLAST of CsaV3_6G039220 vs. ExPASy TrEMBL
Match: A0A5D3BWP4 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00550 PE=3 SV=1)

HSP 1 Score: 723.8 bits (1867), Expect = 4.5e-205
Identity = 362/419 (86.40%), Postives = 381/419 (90.93%), Query Frame = 0


Query: 32  MGLISNIVAILPLLLLLVSNSKAQPAAAQPSAQPAQPAGDAGGVFDITKYGAKPNADITA 91
           MGLISN VA+L +LLLLVSN KAQ                +G V DITK+GAKPNAD+TA
Sbjct: 1   MGLISNFVALLHVLLLLVSNCKAQ---------------SSGVVIDITKFGAKPNADVTA 60

Query: 92  ALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAHPEGEGLL 151
           AL SAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKS IELQIEGTLQAPA P+G+GLL
Sbjct: 61  ALASAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSAIELQIEGTLQAPADPKGDGLL 120

Query: 152 ILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVTGITSLDS 211
           +LE  D LTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNF+TNSIV  ITSLDS
Sbjct: 121 LLEYVDQLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFVTNSIVKDITSLDS 180

Query: 212 KNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDSN 271
           KN+HINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGD+N
Sbjct: 181 KNYHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDCISVGDTN 240

Query: 272 KQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWPDSAVAFP 331
           KQV ISDVTCGPGHGISIGSLGKY+KEKEVVGVTVKKCKLT TTNGVRIKTWPDSAVAFP
Sbjct: 241 KQVVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCKLTDTTNGVRIKTWPDSAVAFP 300

Query: 332 ATDMHFEDIEMDNVSNPIIIDQEYCPWNQCNRKVASKIKISNVSFKNIRGTSATAIAVKI 391
           A+DMHFEDIEM NVSNP+IIDQEYCPWNQCNRKV SKIKISNVSFKNIRGTSAT +AVKI
Sbjct: 301 ASDMHFEDIEMVNVSNPVIIDQEYCPWNQCNRKVPSKIKISNVSFKNIRGTSATPVAVKI 360

Query: 392 VCSKSIPCEGVEIADIDLTYSGPEGPIKSQCANVKPVITGKQNPPICGEVAPADGPSTD 451
           VCS+S PCEGVE+ADIDLTYSG EGPIKSQCANVKPVI+GKQNPPICGE APA GPS+D
Sbjct: 361 VCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVISGKQNPPICGEPAPAGGPSSD 404

[Close]

BLAST of CsaV3_6G039220 vs. ExPASy TrEMBL
Match: A0A1S3BML3 (LOW QUALITY PROTEIN: exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103491497 PE=3 SV=1)

HSP 1 Score: 699.1 bits (1803), Expect = 1.2e-197
Identity = 348/426 (81.69%), Postives = 375/426 (88.03%), Query Frame = 0


Query: 25  QSRKKKKMGLISNIVAILPLLLLLVSNSKAQPAAAQPSAQPAQPAGDAGGVFDITKYGAK 84
           + ++ K+MGLISN VA+LP+LLLLVSNSKAQ AA               GVFDITKYGAK
Sbjct: 5   KGKRGKQMGLISNFVALLPVLLLLVSNSKAQSAA---------------GVFDITKYGAK 64

Query: 85  PNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEGTLQAPAH 144
           PNADITAAL SAWKEACASTTPSKVLIPKG+YGL+QSNLKGPCKS IELQ+EGT+QA   
Sbjct: 65  PNADITAALASAWKEACASTTPSKVLIPKGTYGLTQSNLKGPCKSSIELQLEGTVQASVD 124

Query: 145 PEGEGLLILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLNFITNSIVT 204
            +G+GLL+LE  D LTVSGTGV+DGQGK  W KNDCHLKK CTKLPMNLK NF+TNSIV 
Sbjct: 125 VKGDGLLLLEYVDQLTVSGTGVVDGQGKTAWGKNDCHLKKICTKLPMNLKFNFVTNSIVK 184

Query: 205 GITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNTNIATGDDC 264
            ITSLDSKN+H NLL CKNLTFDHVTITAPGNSPNTDGIHV  SEQINILNTNIATGDDC
Sbjct: 185 DITSLDSKNYHFNLLACKNLTFDHVTITAPGNSPNTDGIHVGDSEQINILNTNIATGDDC 244

Query: 265 ISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTNGVRIKTWP 324
           ISVG SNKQ+ ISDVTCGPGHGISIGSLGKYT EKE+VGVTVKKCKLTGTTNGVRIKTWP
Sbjct: 245 ISVGISNKQIVISDVTCGPGHGISIGSLGKYTNEKELVGVTVKKCKLTGTTNGVRIKTWP 304

Query: 325 DSAVAFPATDMHFEDIEMDNVSNPIIIDQEYCPWNQCNRKVASKIKISNVSFKNIRGTSA 384
           DSAVAFPA+DMHFEDIEM NVSNP++IDQEYCPWNQCNRKV SKIKIS VSFKNIRGTSA
Sbjct: 305 DSAVAFPASDMHFEDIEMVNVSNPVLIDQEYCPWNQCNRKVPSKIKISKVSFKNIRGTSA 364

Query: 385 TAIAVKIVCSKSIPCEGVEIADIDLTYSGPEGPIKSQCANVKPVITGKQNPPICGEVAPA 444
           T +AVK+VCS+S PCEGVE+ADIDLTYSG EGPIKSQCANVKPVI+GKQNPPIC E APA
Sbjct: 365 TPVAVKLVCSQSNPCEGVEVADIDLTYSGSEGPIKSQCANVKPVISGKQNPPICAEPAPA 415

Query: 445 DGPSTD 451
            GPS+D
Sbjct: 425 GGPSSD 415

[Close]

BLAST of CsaV3_6G039220 vs. TAIR 10
Match: AT3G07820.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 405.6 bits (1041), Expect = 5.2e-113
Identity = 192/370 (51.89%), Postives = 265/370 (71.62%), Query Frame = 0


Query: 77  DITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIE 136
           ++   G+   +DIT AL  A+  AC S++PSKV+IPKG + L +  ++GPCK+PIE+ ++
Sbjct: 23  EVFTIGSSSGSDITQALLKAFTSACQSSSPSKVVIPKGEFKLGEIEMRGPCKAPIEVTLQ 82

Query: 137 GTLQAPAHP-EG-EGLLILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLK 196
           GT++A  +  +G E  ++  N D   ++G G  DG+G A W  N+CH   EC KLP++++
Sbjct: 83  GTVKADGNAIQGKEKWVVFGNIDGFKLNGGGAFDGEGNAAWRVNNCHKTFECKKLPISIR 142

Query: 197 LNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINIL 256
            +FI NS +  I+S+D+KNFHIN+LG KN+T +++ I AP +SPNTDGIH+  S+ + IL
Sbjct: 143 FDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKIL 202

Query: 257 NTNIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGT 316
           N+ I+TGDDCISVGD  K + +  VTCGPGHGIS+GSLG+Y  E++V G+ V  C L  T
Sbjct: 203 NSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQET 262

Query: 317 TNGVRIKTWPDSAVAFPATDMHFEDIEMDNVSNPIIIDQEYCPWNQCNRKVASKIKISNV 376
            NG+RIKTWP +A +  A+D+HFEDI + +VSNPI+IDQEYCPWNQCN++ AS IK+ N+
Sbjct: 263 DNGLRIKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIKLVNI 322

Query: 377 SFKNIRGTSATAIAVKIVCSKSIPCEGVEIADIDLTYSGPEGPIKSQCANVKPVITGKQN 436
           SFKNIRGTS    AVK++CSK  PC+ VEI DID+ Y+G +GP    C+NV P I G Q+
Sbjct: 323 SFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGDIDIKYNGADGPATFHCSNVSPKILGSQS 382

Query: 437 PPICGEVAPA 445
           P  C   APA
Sbjct: 383 PKACS--APA 390

[Close]

BLAST of CsaV3_6G039220 vs. TAIR 10
Match: AT3G07840.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 401.0 bits (1029), Expect = 1.3e-111
Identity = 186/364 (51.10%), Postives = 256/364 (70.33%), Query Frame = 0


Query: 77  DITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIE 136
           ++   G  P +DIT AL  A+  AC + T SKV+I KG + L +  + GPCK+P+E+ ++
Sbjct: 24  EVFNVGGSPGSDITQALLKAFTSACQAPTASKVVITKGEFKLGEIEMTGPCKAPVEINLQ 83

Query: 137 GTLQA--PAHPEGEGLLILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLK 196
           GTL+A   A    E  ++    +   ++G G+ DG+G A W  N+CH   EC KLP++++
Sbjct: 84  GTLKADGKAIQGKERWVVFLRINGFKLNGGGIFDGEGNAAWRVNNCHKTFECKKLPISIR 143

Query: 197 LNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINIL 256
            +F+ N+ +  I+S+D+KNFHIN+LG KN+TFD+V + AP  SPNTDGIH+  SE + IL
Sbjct: 144 FDFVENAEIRDISSIDAKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGRSEGVKIL 203

Query: 257 NTNIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGT 316
           N+ IATGDDCISVGD  K + + +V CGPGHGIS+GSLG+Y  E++V G+TV  C L GT
Sbjct: 204 NSKIATGDDCISVGDGMKNLHVENVMCGPGHGISVGSLGRYVHEQDVTGITVVNCTLQGT 263

Query: 317 TNGVRIKTWPDSAVAFPATDMHFEDIEMDNVSNPIIIDQEYCPWNQCNRKVASKIKISNV 376
            NG+RIKTWP +A A  A+ +HFE+I ++NVSNPI+IDQEYCPWNQCN++  S IK+ ++
Sbjct: 264 DNGLRIKTWPSAACATTASGIHFENIILNNVSNPILIDQEYCPWNQCNKQKPSTIKLVDI 323

Query: 377 SFKNIRGTSATAIAVKIVCSKSIPCEGVEIADIDLTYSGPEGPIKSQCANVKPVITGKQN 436
           SFKNIRGTS    AVK++CSK+ PC  VEI +I+L Y G +GP    C+NV P + G QN
Sbjct: 324 SFKNIRGTSGNKDAVKLLCSKAHPCANVEIGNINLEYKGADGPPTFMCSNVSPKLVGTQN 383

Query: 437 PPIC 439
           P  C
Sbjct: 384 PKAC 387

[Close]

BLAST of CsaV3_6G039220 vs. TAIR 10
Match: AT5G48140.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 394.8 bits (1013), Expect = 9.2e-110
Identity = 184/362 (50.83%), Postives = 252/362 (69.61%), Query Frame = 0


Query: 78  ITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKSPIELQIEG 137
           I    + P +DIT AL  A+ EAC   T S V+IPKG Y L +  + GPCK+PI + + G
Sbjct: 25  IFNINSPPGSDITNALLKAFNEACQFPTKSTVMIPKGEYKLGEIVMMGPCKAPIRIALLG 84

Query: 138 TLQAPAHPEG-EGLLILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECTKLPMNLKLN 197
           T++A  +  G E  +   N +   ++G GV DG+G A W  N+CH    C KLP++++ +
Sbjct: 85  TVKADGNANGKEKWVAFRNINGFKLNGGGVFDGEGNAAWRVNNCHKTFNCKKLPISIRFD 144

Query: 198 FITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQINILNT 257
           F+T++ + GITSLD+K+FHIN++G KN+TF+ V I AP  SPNTDGIHV  S+ I I+N+
Sbjct: 145 FVTDAKIRGITSLDAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGRSDGIKIINS 204

Query: 258 NIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCKLTGTTN 317
            I+TGDDC+SVGD  K + +  VTCGPGHGISIGSLG+Y+ E+ V G+ +  C L  T N
Sbjct: 205 FISTGDDCVSVGDGMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCTLQETDN 264

Query: 318 GVRIKTWPDSAVAFPATDMHFEDIEMDNVSNPIIIDQEYCPWNQCNRKVASKIKISNVSF 377
           G+RIKTWP +A    A+D+HFE+I + NVSNPI+IDQEYCPWNQCN++  S IK++N+SF
Sbjct: 265 GLRIKTWPSAACTTTASDIHFENILLKNVSNPILIDQEYCPWNQCNKQKPSTIKLANISF 324

Query: 378 KNIRGTSATAIAVKIVCSKSIPCEGVEIADIDLTYSGPEGPIKSQCANVKPVITGKQNPP 437
           K IRGTS    AVK++CSK  PC+ VE+ D+++ Y+G +GP   QC+NV P + G Q P 
Sbjct: 325 KKIRGTSGNKDAVKLLCSKGYPCQNVEVGDVNIQYTGADGPATFQCSNVSPKLVGTQIPK 384

Query: 438 IC 439
            C
Sbjct: 385 AC 386

[Close]

BLAST of CsaV3_6G039220 vs. TAIR 10
Match: AT3G07830.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 391.3 bits (1004), Expect = 1.0e-108
Identity = 178/371 (47.98%), Postives = 258/371 (69.54%), Query Frame = 0


Query: 70  GDAGGVFDITKYGAKPNADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGPCKS 129
           G +    ++ +  + P +DIT AL  A+  AC S TP KV+IPKG + L +  + GPCKS
Sbjct: 17  GFSANAHEVLRLTSSPGSDITQALLRAFTTACQSPTPRKVVIPKGQFKLGEIMMSGPCKS 76

Query: 130 PIELQIEGTLQAPAHP--EGEGLLILENTDLLTVSGTGVLDGQGKAGWEKNDCHLKKECT 189
           P+E+ + GT+ A  +     E  ++ +  D   ++G G  DG+G A W  N+CH   EC 
Sbjct: 77  PVEITLLGTVLADGNSIHGKEKWVVFQRMDGFRLNGGGTFDGEGNAAWRVNNCHKTFECK 136

Query: 190 KLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSS 249
           KLP++++ +F+TN+ +  I+S+D+KNFHIN++G KN+TFD+V I AP  SPNTDGIH+  
Sbjct: 137 KLPISIRFDFVTNAEIRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGR 196

Query: 250 SEQINILNTNIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVK 309
           S  ++I+N+ I+TGDDC+SVGD    + + +V CGPGHGIS+GSLG+Y  E++V G+ V 
Sbjct: 197 SVGVSIINSRISTGDDCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVI 256

Query: 310 KCKLTGTTNGVRIKTWPDSAVAFPATDMHFEDIEMDNVSNPIIIDQEYCPWNQCNRKVAS 369
            C L  T NG+RIKTWP +A +  A+++HFE+I + NVSNPI+IDQEYCPWNQCN++ +S
Sbjct: 257 NCTLQETDNGLRIKTWPSAACSTTASNIHFENIILRNVSNPILIDQEYCPWNQCNKQKSS 316

Query: 370 KIKISNVSFKNIRGTSATAIAVKIVCSKSIPCEGVEIADIDLTYSGPEGPIKSQCANVKP 429
            IK++N+SF+ IRGTS    AVK++CSK  PCE V++ DI++ Y+G +GP    C+NV+P
Sbjct: 317 SIKLANISFRRIRGTSGNKDAVKLLCSKGYPCENVQVGDINIQYTGADGPATFMCSNVRP 376

Query: 430 VITGKQNPPIC 439
            + G Q P  C
Sbjct: 377 KLVGTQFPKAC 387

[Close]

BLAST of CsaV3_6G039220 vs. TAIR 10
Match: AT3G14040.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 367.5 bits (942), Expect = 1.6e-101
Identity = 180/381 (47.24%), Postives = 249/381 (65.35%), Query Frame = 0


Query: 69  AGDAGGVFDITKYGAKPN--ADITAALTSAWKEACASTTPSKVLIPKGSYGLSQSNLKGP 128
           A   G   D+   GAK +   D +AA  +AWKEACA+   S + +PKG Y +     KGP
Sbjct: 64  AKPGGASLDVKASGAKGDGKTDDSAAFAAAWKEACAA--GSTITVPKGEYLVESLEFKGP 123

Query: 129 CKSPIELQIEGTLQAPAHPE----GEGLLILENTDLLTVSGT-GVLDGQGKAGWEKNDCH 188
           CK P+ L++ G  +APA  +      G +  EN    T++G   + DGQG   W+ NDC 
Sbjct: 124 CKGPVTLELNGNFKAPATVKTTKPHAGWIDFENLADFTLNGNKAIFDGQGSLAWKANDCA 183

Query: 189 LKKECTKLPMNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTD 248
              +C  LP+N++   +TNS +  ITS +SK FH+N+L CKN+T   + I AP  S NTD
Sbjct: 184 KTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTD 243

Query: 249 GIHVSSSEQINILNTNIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEV 308
           GIH+  S  +N++   I TGDDC+S+GD  + + + +V CGPGHGISIGSLG+Y  E+ V
Sbjct: 244 GIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPV 303

Query: 309 VGVTVKKCKLTGTTNGVRIKTWPDSAVAFPATDMHFEDIEMDNVSNPIIIDQEYCPWNQC 368
            GVTV+KC +  T NGVRIKTWP S     A+++ FEDI MDNVS P++IDQEYCP+  C
Sbjct: 304 KGVTVRKCLIKNTDNGVRIKTWPGSPPGI-ASNILFEDITMDNVSLPVLIDQEYCPYGHC 363

Query: 369 NRKVASKIKISNVSFKNIRGTSATAIAVKIVCSKSIPCEGVEIADIDLTYSGPEGPIKSQ 428
              V SK+K+S+V+ KNI+GTSAT +AVK++CSK +PC  + ++DI+L ++G EGP  S 
Sbjct: 364 KAGVPSKVKLSDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSA 423

Query: 429 CANVKPVITGKQNPPICGEVA 443
           C+N+KP+++GK  P  C EVA
Sbjct: 424 CSNIKPILSGKLVPAACTEVA 441

The following BLAST results are available for this feature:

BLAST of CsaV3_6G039220 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8647377.1	2.0e-255	100.00	hypothetical protein Csa_004085 [Cucumis sativus]	[more]
XP_031742831.1	9.8e-255	99.78	exopolygalacturonase-like [Cucumis sativus]	[more]
XP_011657634.1	1.3e-238	99.76	exopolygalacturonase [Cucumis sativus]	[more]
XP_031742832.1	2.9e-238	99.28	exopolygalacturonase-like [Cucumis sativus] >XP_031742833.1 exopolygalacturonase...	[more]
XP_031742970.1	4.9e-238	99.28	exopolygalacturonase-like [Cucumis sativus]	[more]

BLAST of CsaV3_6G039220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q05967	1.1e-123	58.54	Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1	[more]
Q40312	3.0e-121	56.30	Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1	[more]
P24548	8.6e-121	58.29	Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1	[more]
Q6H9K0	2.7e-114	54.05	Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 S...	[more]
Q39766	3.0e-113	49.29	Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1	[more]

BLAST of CsaV3_6G039220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TRZ0	1.9e-208	87.35	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5D3DYI3	3.3e-208	87.35	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5A7TR51	5.7e-208	87.35	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A5D3BWP4	4.5e-205	86.40	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3BML3	1.2e-197	81.69	LOW QUALITY PROTEIN: exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103...	[more]

BLAST of CsaV3_6G039220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07820.1	5.2e-113	51.89	Pectin lyase-like superfamily protein	[more]
AT3G07840.1	1.3e-111	51.10	Pectin lyase-like superfamily protein	[more]
AT5G48140.1	9.2e-110	50.83	Pectin lyase-like superfamily protein	[more]
AT3G07830.1	1.0e-108	47.98	Pectin lyase-like superfamily protein	[more]
AT3G14040.1	1.6e-101	47.24	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 332..353 e-value: 7000.0 score: 1.2 coord: 366..406 e-value: 5900.0 score: 1.7 coord: 301..322 e-value: 12.0 score: 14.8 coord: 248..269 e-value: 2500.0 score: 4.4 coord: 221..247 e-value: 3.5 score: 16.6
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 61..438 e-value: 1.5E-106 score: 358.9
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 101..426 e-value: 6.7E-102 score: 340.9
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 278..291
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..29
None	No IPR available	PANTHER	PTHR31375:SF248	POLYGALACTURONASE	coord: 45..442
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 45..442
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 73..440

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G039220.1	CsaV3_6G039220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity