CsaV3_6G038850 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G038850
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	C2H2-type domain-containing protein
Location	chr6: 22270397 .. 22271932 (+)
RNA-Seq Expression	CsaV3_6G038850
Synteny	CsaV3_6G038850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGGAATCAATGATATATGATCATTCATGTAGAGTTTGTATGGCTCTATGAATGAATATGCTTTCTTCGTAATTAACTAACTTGAACAAGAGAGCTTCATAAGCAATTCTCTCTCATGAAATTTTCTCCAATTTTAGTCTTTAAAGTTTAGAAAGAGACCTTACTTCCGTAACCAAGCTAATATGTTATGTTCCGAATCAAGAATCGAAGTCTAATGAATTTCATAACAGAGTTGCAATCAGTCAACTCAAGACTGCAGTGAATGCATTAAACTAAGTCTGGTATTATTCCTGTAGAACATATTCTAAATGGGAAGGTTGTTTTAATAATTTATTTGGAACGGAAAATAATGTTATAGGCTTTGTCTTAGTCTTCATTCAGCAAATAGAATAATGGAAAAGGCAGAAAATCCGGATGATTTGACAACATATGAACATGATGAACTCGCAATTTGCTCCTCTTTTTCTATTCCATAATTTCATCTCTAAAGATTAGCTTCGAAGAAGAGAACTCAATTTCTTCACAAACATCACAATTTCATCCTTCAATTCTGGACAAATTCCTCTACACTCAATCTCTTCTCTAAGCTACCCACTCATTCTCCTTTAAAACACTTTCCATCCAAAACCTTATCATTTCTGCCAAATGAAAATGCAGATCAAGAACATCGAATTTCATAGTGTTCCATCAAGTCCAAAGCAGTGTAAGTCTCCGATTGGACATTCACGTCCGAATTCTACCCTAGACGAGTTTGAATTCGGAACTAGCTGCCGTTTCAATCTCAACGATGTCGATTTCGATCTAGAGGATCGAAAAGAGCAACAAAACAAGAAAAGAATGCAATTCGAAGATGAATCTTTACCTGTAATGGCGTTTGCCGATGAATTATTTTCAGACGGAAAGGTTCTTCCTCTTCCTCCTCGGCTCAAAATCCCTCCGTCTCATGAACGTCTAAACGAAAATCGCAGCGGCAAAAGCTCCACCGTGTCGTCGCCTCGATCGCCAGTCTCGGCGCTCAAAATCAAATTTGTTCATCAGAATCTATGGAACGATGAATTTGATCCTTTCTTGGTAGCCTTACAGAGTGTGAAGAAAGACGGAGCGGGAAAAGCGCAAGCAAACAGAGATGGGTCGGATTTGGCCCATTCATCATTTACACCTAGGCCGAATAACTCATCAGAACAAATGATGGGCCTTATATTATCCCATAGGCAGCCCAATTCAAAAAATGGGGCAATAGAAAGCCCAAAAATGTTCCTTGAGCCCAAGGGATTGGCATTTGCAAGGGCAGTTGCGAATATGGATCTTGAAACCGGAACGGGGTTCAACAGGTTAACAATGTCAGGGCCCATTATGAAGTCGAACGGGAACCGCAAAGATCGCAGACGGTTTTCTACATGGAAGAGAAATAAGCTAAGGAAAGTTTTATCCTTGTTTGGGAAACTCGGCCTTAAGTTCGCGAGATCCTAATTTCACACACATAACTATTACTATACAAAGTTTGTTTAAATCTTGAAATAATTATTATAAATTTA

mRNA sequence

ATGAAAATGCAGATCAAGAACATCGAATTTCATAGTGTTCCATCAAGTCCAAAGCAGTGTAAGTCTCCGATTGGACATTCACGTCCGAATTCTACCCTAGACGAGTTTGAATTCGGAACTAGCTGCCGTTTCAATCTCAACGATGTCGATTTCGATCTAGAGGATCGAAAAGAGCAACAAAACAAGAAAAGAATGCAATTCGAAGATGAATCTTTACCTGTAATGGCGTTTGCCGATGAATTATTTTCAGACGGAAAGGTTCTTCCTCTTCCTCCTCGGCTCAAAATCCCTCCGTCTCATGAACGTCTAAACGAAAATCGCAGCGGCAAAAGCTCCACCGTGTCGTCGCCTCGATCGCCAGTCTCGGCGCTCAAAATCAAATTTGTTCATCAGAATCTATGGAACGATGAATTTGATCCTTTCTTGGTAGCCTTACAGAGTGTGAAGAAAGACGGAGCGGGAAAAGCGCAAGCAAACAGAGATGGGTCGGATTTGGCCCATTCATCATTTACACCTAGGCCGAATAACTCATCAGAACAAATGATGGGCCTTATATTATCCCATAGGCAGCCCAATTCAAAAAATGGGGCAATAGAAAGCCCAAAAATGTTCCTTGAGCCCAAGGGATTGGCATTTGCAAGGGCAGTTGCGAATATGGATCTTGAAACCGGAACGGGGTTCAACAGGTTAACAATGTCAGGGCCCATTATGAAGTCGAACGGGAACCGCAAAGATCGCAGACGGTTTTCTACATGGAAGAGAAATAAGCTAAGGAAAGTTTTATCCTTGTTTGGGAAACTCGGCCTTAAGTTCGCGAGATCCTAA

Coding sequence (CDS)

ATGAAAATGCAGATCAAGAACATCGAATTTCATAGTGTTCCATCAAGTCCAAAGCAGTGTAAGTCTCCGATTGGACATTCACGTCCGAATTCTACCCTAGACGAGTTTGAATTCGGAACTAGCTGCCGTTTCAATCTCAACGATGTCGATTTCGATCTAGAGGATCGAAAAGAGCAACAAAACAAGAAAAGAATGCAATTCGAAGATGAATCTTTACCTGTAATGGCGTTTGCCGATGAATTATTTTCAGACGGAAAGGTTCTTCCTCTTCCTCCTCGGCTCAAAATCCCTCCGTCTCATGAACGTCTAAACGAAAATCGCAGCGGCAAAAGCTCCACCGTGTCGTCGCCTCGATCGCCAGTCTCGGCGCTCAAAATCAAATTTGTTCATCAGAATCTATGGAACGATGAATTTGATCCTTTCTTGGTAGCCTTACAGAGTGTGAAGAAAGACGGAGCGGGAAAAGCGCAAGCAAACAGAGATGGGTCGGATTTGGCCCATTCATCATTTACACCTAGGCCGAATAACTCATCAGAACAAATGATGGGCCTTATATTATCCCATAGGCAGCCCAATTCAAAAAATGGGGCAATAGAAAGCCCAAAAATGTTCCTTGAGCCCAAGGGATTGGCATTTGCAAGGGCAGTTGCGAATATGGATCTTGAAACCGGAACGGGGTTCAACAGGTTAACAATGTCAGGGCCCATTATGAAGTCGAACGGGAACCGCAAAGATCGCAGACGGTTTTCTACATGGAAGAGAAATAAGCTAAGGAAAGTTTTATCCTTGTTTGGGAAACTCGGCCTTAAGTTCGCGAGATCCTAA

Protein sequence

MKMQIKNIEFHSVPSSPKQCKSPIGHSRPNSTLDEFEFGTSCRFNLNDVDFDLEDRKEQQNKKRMQFEDESLPVMAFADELFSDGKVLPLPPRLKIPPSHERLNENRSGKSSTVSSPRSPVSALKIKFVHQNLWNDEFDPFLVALQSVKKDGAGKAQANRDGSDLAHSSFTPRPNNSSEQMMGLILSHRQPNSKNGAIESPKMFLEPKGLAFARAVANMDLETGTGFNRLTMSGPIMKSNGNRKDRRRFSTWKRNKLRKVLSLFGKLGLKFARS*

Homology

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BLAST of CsaV3_6G038850 vs. NCBI nr
Match: KGN48085.1 (hypothetical protein Csa_002764 [Cucumis sativus])

HSP 1 Score: 546.2 bits (1406), Expect = 1.6e-151
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MKMQIKNIEFHSVPSSPKQCKSPIGHSRPNSTLDEFEFGTSCRFNLNDVDFDLEDRKEQQ 60
           MKMQIKNIEFHSVPSSPKQCKSPIGHSRPNSTLDEFEFGTSCRFNLNDVDFDLEDRKEQQ
Sbjct: 1   MKMQIKNIEFHSVPSSPKQCKSPIGHSRPNSTLDEFEFGTSCRFNLNDVDFDLEDRKEQQ 60

Query: 61  NKKRMQFEDESLPVMAFADELFSDGKVLPLPPRLKIPPSHERLNENRSGKSSTVSSPRSP 120
           NKKRMQFEDESLPVMAFADELFSDGKVLPLPPRLKIPPSHERLNENRSGKSSTVSSPRSP
Sbjct: 61  NKKRMQFEDESLPVMAFADELFSDGKVLPLPPRLKIPPSHERLNENRSGKSSTVSSPRSP 120

Query: 121 VSALKIKFVHQNLWNDEFDPFLVALQSVKKDGAGKAQANRDGSDLAHSSFTPRPNNSSEQ 180
           VSALKIKFVHQNLWNDEFDPFLVALQSVKKDGAGKAQANRDGSDLAHSSFTPRPNNSSEQ
Sbjct: 121 VSALKIKFVHQNLWNDEFDPFLVALQSVKKDGAGKAQANRDGSDLAHSSFTPRPNNSSEQ 180

Query: 181 MMGLILSHRQPNSKNGAIESPKMFLEPKGLAFARAVANMDLETGTGFNRLTMSGPIMKSN 240
           MMGLILSHRQPNSKNGAIESPKMFLEPKGLAFARAVANMDLETGTGFNRLTMSGPIMKSN
Sbjct: 181 MMGLILSHRQPNSKNGAIESPKMFLEPKGLAFARAVANMDLETGTGFNRLTMSGPIMKSN 240

Query: 241 GNRKDRRRFSTWKRNKLRKVLSLFGKLGLKFARS 275
           GNRKDRRRFSTWKRNKLRKVLSLFGKLGLKFARS
Sbjct: 241 GNRKDRRRFSTWKRNKLRKVLSLFGKLGLKFARS 274

[Close]

BLAST of CsaV3_6G038850 vs. NCBI nr
Match: TYJ96101.1 (hypothetical protein E5676_scaffold182G00630 [Cucumis melo var. makuwa])

HSP 1 Score: 515.4 bits (1326), Expect = 3.1e-142
Identity = 258/274 (94.16%), Postives = 263/274 (95.99%), Query Frame = 0


Query: 1   MKMQIKNIEFHSVPSSPKQCKSPIGHSRPNSTLDEFEFGTSCRFNLNDVDFDLEDRKEQQ 60
           MKMQIKNIEFHS PSSPKQCKSPIGHSRPNSTLDEFEFGTSCRFNLNDVDFDLEDR EQQ
Sbjct: 1   MKMQIKNIEFHSAPSSPKQCKSPIGHSRPNSTLDEFEFGTSCRFNLNDVDFDLEDRTEQQ 60

Query: 61  NKKRMQFEDESLPVMAFADELFSDGKVLPLPPRLKIPPSHERLNENRSGKSSTVSSPRSP 120
           NKK MQ EDESLPVMAFADELFSDGKVLPLPPRLKIPPSHERLNEN SGKSSTVSSPRSP
Sbjct: 61  NKKIMQIEDESLPVMAFADELFSDGKVLPLPPRLKIPPSHERLNENHSGKSSTVSSPRSP 120

Query: 121 VSALKIKFVHQNLWNDEFDPFLVALQSVKKDGAGKAQANRDGSDLAHSSFTPRPNNSSEQ 180
           +SALKIKFVHQNLWNDEFDPFLVALQSVKKDGAGKAQAN DG D AHS+FTPRPNNSSEQ
Sbjct: 121 LSALKIKFVHQNLWNDEFDPFLVALQSVKKDGAGKAQANSDGPDPAHSTFTPRPNNSSEQ 180

Query: 181 MMGLILSHRQPNSKNGAIESPKMFLEPKGLAFARAVANMDLETGTGFNRLTMSGPIMKSN 240
           MMGLILSHRQPNSKNG+IESPKMFLEPKGLAFARAV NMDLETG+GFNRLTMSGPI+KSN
Sbjct: 181 MMGLILSHRQPNSKNGSIESPKMFLEPKGLAFARAVVNMDLETGSGFNRLTMSGPILKSN 240

Query: 241 GNRKDRRRFSTWKRNKLRKVLSLFGKLGLKFARS 275
           GNRKD RRFS WKRNKLRKVLSLFGKLGLKFARS
Sbjct: 241 GNRKDGRRFSPWKRNKLRKVLSLFGKLGLKFARS 274

[Close]

BLAST of CsaV3_6G038850 vs. NCBI nr
Match: KAA0061759.1 (hypothetical protein E6C27_scaffold212G001370 [Cucumis melo var. makuwa])

HSP 1 Score: 510.0 bits (1312), Expect = 1.3e-140
Identity = 256/274 (93.43%), Postives = 262/274 (95.62%), Query Frame = 0


Query: 1   MKMQIKNIEFHSVPSSPKQCKSPIGHSRPNSTLDEFEFGTSCRFNLNDVDFDLEDRKEQQ 60
           MKMQIKNIEFHS PSSPKQ KSPIGHSRPNSTLDEFEFGTSCRFNLNDVDFDLEDR E+Q
Sbjct: 1   MKMQIKNIEFHSAPSSPKQSKSPIGHSRPNSTLDEFEFGTSCRFNLNDVDFDLEDRTEKQ 60

Query: 61  NKKRMQFEDESLPVMAFADELFSDGKVLPLPPRLKIPPSHERLNENRSGKSSTVSSPRSP 120
           NKK MQ EDESLPVMAFADELFSDGKVLPLPPRLKIPPSHERLNEN SGKSSTVSSPRSP
Sbjct: 61  NKKIMQIEDESLPVMAFADELFSDGKVLPLPPRLKIPPSHERLNENHSGKSSTVSSPRSP 120

Query: 121 VSALKIKFVHQNLWNDEFDPFLVALQSVKKDGAGKAQANRDGSDLAHSSFTPRPNNSSEQ 180
           +SALKIKFVHQNLWNDEFDPFLVALQSVKKDGAGKAQAN DG D AHS+FTPRPNNSSEQ
Sbjct: 121 LSALKIKFVHQNLWNDEFDPFLVALQSVKKDGAGKAQANSDGPDPAHSTFTPRPNNSSEQ 180

Query: 181 MMGLILSHRQPNSKNGAIESPKMFLEPKGLAFARAVANMDLETGTGFNRLTMSGPIMKSN 240
           MMGLILSHRQPNSKNG+IESPKMFLEPKGLAFARAV NMDLETG+GFNRLTMSGPI+KSN
Sbjct: 181 MMGLILSHRQPNSKNGSIESPKMFLEPKGLAFARAVVNMDLETGSGFNRLTMSGPILKSN 240

Query: 241 GNRKDRRRFSTWKRNKLRKVLSLFGKLGLKFARS 275
           GNRKD RRFS WKRNKLRKVLSLFGKLGLKFARS
Sbjct: 241 GNRKDGRRFSPWKRNKLRKVLSLFGKLGLKFARS 274

[Close]

BLAST of CsaV3_6G038850 vs. NCBI nr
Match: KAG6570429.1 (hypothetical protein SDJN03_29344, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 416.0 bits (1068), Expect = 2.5e-112
Identity = 207/272 (76.10%), Postives = 231/272 (84.93%), Query Frame = 0


Query: 3   MQIKNIEFHSVPSSPKQCKSPIGHSRPNSTLDEFEFGTSCRFNLNDVDFDLEDRKEQQNK 62
           M++KN+EF S PSSPK+ KSP GHSRPNST+DEFEF TS RFNLNDVDFDLEDR EQQ+K
Sbjct: 1   MKMKNMEFCSAPSSPKRYKSPFGHSRPNSTIDEFEFETSSRFNLNDVDFDLEDRPEQQSK 60

Query: 63  KRMQFEDESLPVMAFADELFSDGKVLPLPPRLKIPPSHERLNENRSGKSSTVSSPRSPVS 122
           KR+Q ED SLP MAFADELFSDGKVLPLPPRLKIPP HERLN++RSGKSST SSPRSPV+
Sbjct: 61  KRVQIEDASLPAMAFADELFSDGKVLPLPPRLKIPPPHERLNDHRSGKSSTTSSPRSPVA 120

Query: 123 ALKIKFVHQNLWNDEFDPFLVALQSVKKDGAGKAQANRDGSDLAHSSFTPRPNNSSEQMM 182
           ALKIKFVHQNLWND+FDPFLVALQ+VKKDG GK Q N +G + AHS F   PNNS EQ+M
Sbjct: 121 ALKIKFVHQNLWNDDFDPFLVALQNVKKDGTGKTQENSNGPESAHSPFPRMPNNSIEQIM 180

Query: 183 GLILSHRQPNSKNGAIESPKMFLEPKGLAFARAVANMDLETGTGFNRLTMSGPIMKSNGN 242
           GL L HRQPN K G +E+PK+F+EPKGLAFARAV NMD ETG+ FNR   SGPI+KS GN
Sbjct: 181 GLQLPHRQPNLKTGPVENPKLFIEPKGLAFARAVVNMDRETGSRFNRFITSGPILKSTGN 240

Query: 243 RKDRRRFSTWKRNKLRKVLSLFGKLGLKFARS 275
           R++  RF TWKRNKL K+LSLF KLGLK ARS
Sbjct: 241 RRNGNRFCTWKRNKLSKLLSLFAKLGLKSARS 272

[Close]

BLAST of CsaV3_6G038850 vs. NCBI nr
Match: XP_023893263.1 (uncharacterized protein LOC112005248 [Quercus suber])

HSP 1 Score: 141.7 bits (356), Expect = 9.2e-30
Identity = 109/307 (35.50%), Postives = 157/307 (51.14%), Query Frame = 0


Query: 2   KMQIKNIEFHSVPSSPKQ--CKSPIG---------HSRPNSTLDEFEFGTSCRFNL---- 61
           +  I+N+ F+S+P+SP +    + +G         +    S+ D+FEF TS RF+L    
Sbjct: 18  RFSIENMNFYSMPTSPTRGLSSAQLGFAIEPTTPTYEDAKSSFDDFEFDTSGRFSLISNN 77

Query: 62  ----NDVDFDLEDRKEQQNKKRMQFEDESLPVMAFADELFSDGKVLPLPPRLKIPPSHER 121
                + +  LE + +QQ ++R   +  SLP MAFADELFSDGKVLP  P LK+PP  + 
Sbjct: 78  TETYQNFENPLEHQLQQQKQERQNEDPLSLPTMAFADELFSDGKVLPQSP-LKLPPRLQY 137

Query: 122 LNENRSGKSSTVSSPRSPVSALKIKFVHQNLWNDEFDPFLVALQSVKKDGAGKAQANRDG 181
           +N     +SS  S PRSP S LK+ F H+++WND+FDPF+VAL++V+++  GK Q  RD 
Sbjct: 138 VNNKSGNQSSAGSPPRSPGSVLKLSFSHRSMWNDDFDPFMVALENVREEKRGKTQ--RDN 197

Query: 182 SDLAHS-----SFTPRPNNSSEQMM--------GLILSHRQPNSKNGAIES--------- 241
              A S     +  P+ +N S   M         + + H    S    + +         
Sbjct: 198 HRRARSLSPLRAARPQKSNYSTGSMVQDKKLGPQIPMEHESNGSAFATLNNPHEPMEQVG 257

Query: 242 --PKMFLEPKGLAFARAV--ANMDLETGTGFNRLTMSGPIM--KSNGNRKDRRRFSTWKR 262
             PK   EPKGL+FAR V    MD E  +  N  T SGP +  + +G           KR
Sbjct: 258 PRPKKLAEPKGLSFARQVRLVKMDHEIPSKPNMTTPSGPTVAAEESGKEIGGSFIRENKR 317

[Close]

BLAST of CsaV3_6G038850 vs. ExPASy TrEMBL
Match: A0A0A0KEI4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G429640 PE=4 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 7.8e-152
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MKMQIKNIEFHSVPSSPKQCKSPIGHSRPNSTLDEFEFGTSCRFNLNDVDFDLEDRKEQQ 60
           MKMQIKNIEFHSVPSSPKQCKSPIGHSRPNSTLDEFEFGTSCRFNLNDVDFDLEDRKEQQ
Sbjct: 1   MKMQIKNIEFHSVPSSPKQCKSPIGHSRPNSTLDEFEFGTSCRFNLNDVDFDLEDRKEQQ 60

Query: 61  NKKRMQFEDESLPVMAFADELFSDGKVLPLPPRLKIPPSHERLNENRSGKSSTVSSPRSP 120
           NKKRMQFEDESLPVMAFADELFSDGKVLPLPPRLKIPPSHERLNENRSGKSSTVSSPRSP
Sbjct: 61  NKKRMQFEDESLPVMAFADELFSDGKVLPLPPRLKIPPSHERLNENRSGKSSTVSSPRSP 120

Query: 121 VSALKIKFVHQNLWNDEFDPFLVALQSVKKDGAGKAQANRDGSDLAHSSFTPRPNNSSEQ 180
           VSALKIKFVHQNLWNDEFDPFLVALQSVKKDGAGKAQANRDGSDLAHSSFTPRPNNSSEQ
Sbjct: 121 VSALKIKFVHQNLWNDEFDPFLVALQSVKKDGAGKAQANRDGSDLAHSSFTPRPNNSSEQ 180

Query: 181 MMGLILSHRQPNSKNGAIESPKMFLEPKGLAFARAVANMDLETGTGFNRLTMSGPIMKSN 240
           MMGLILSHRQPNSKNGAIESPKMFLEPKGLAFARAVANMDLETGTGFNRLTMSGPIMKSN
Sbjct: 181 MMGLILSHRQPNSKNGAIESPKMFLEPKGLAFARAVANMDLETGTGFNRLTMSGPIMKSN 240

Query: 241 GNRKDRRRFSTWKRNKLRKVLSLFGKLGLKFARS 275
           GNRKDRRRFSTWKRNKLRKVLSLFGKLGLKFARS
Sbjct: 241 GNRKDRRRFSTWKRNKLRKVLSLFGKLGLKFARS 274

[Close]

BLAST of CsaV3_6G038850 vs. ExPASy TrEMBL
Match: A0A5D3BBX2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00630 PE=4 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 1.5e-142
Identity = 258/274 (94.16%), Postives = 263/274 (95.99%), Query Frame = 0


Query: 1   MKMQIKNIEFHSVPSSPKQCKSPIGHSRPNSTLDEFEFGTSCRFNLNDVDFDLEDRKEQQ 60
           MKMQIKNIEFHS PSSPKQCKSPIGHSRPNSTLDEFEFGTSCRFNLNDVDFDLEDR EQQ
Sbjct: 1   MKMQIKNIEFHSAPSSPKQCKSPIGHSRPNSTLDEFEFGTSCRFNLNDVDFDLEDRTEQQ 60

Query: 61  NKKRMQFEDESLPVMAFADELFSDGKVLPLPPRLKIPPSHERLNENRSGKSSTVSSPRSP 120
           NKK MQ EDESLPVMAFADELFSDGKVLPLPPRLKIPPSHERLNEN SGKSSTVSSPRSP
Sbjct: 61  NKKIMQIEDESLPVMAFADELFSDGKVLPLPPRLKIPPSHERLNENHSGKSSTVSSPRSP 120

Query: 121 VSALKIKFVHQNLWNDEFDPFLVALQSVKKDGAGKAQANRDGSDLAHSSFTPRPNNSSEQ 180
           +SALKIKFVHQNLWNDEFDPFLVALQSVKKDGAGKAQAN DG D AHS+FTPRPNNSSEQ
Sbjct: 121 LSALKIKFVHQNLWNDEFDPFLVALQSVKKDGAGKAQANSDGPDPAHSTFTPRPNNSSEQ 180

Query: 181 MMGLILSHRQPNSKNGAIESPKMFLEPKGLAFARAVANMDLETGTGFNRLTMSGPIMKSN 240
           MMGLILSHRQPNSKNG+IESPKMFLEPKGLAFARAV NMDLETG+GFNRLTMSGPI+KSN
Sbjct: 181 MMGLILSHRQPNSKNGSIESPKMFLEPKGLAFARAVVNMDLETGSGFNRLTMSGPILKSN 240

Query: 241 GNRKDRRRFSTWKRNKLRKVLSLFGKLGLKFARS 275
           GNRKD RRFS WKRNKLRKVLSLFGKLGLKFARS
Sbjct: 241 GNRKDGRRFSPWKRNKLRKVLSLFGKLGLKFARS 274

[Close]

BLAST of CsaV3_6G038850 vs. ExPASy TrEMBL
Match: A0A5A7V7W2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G001370 PE=4 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 6.2e-141
Identity = 256/274 (93.43%), Postives = 262/274 (95.62%), Query Frame = 0


Query: 1   MKMQIKNIEFHSVPSSPKQCKSPIGHSRPNSTLDEFEFGTSCRFNLNDVDFDLEDRKEQQ 60
           MKMQIKNIEFHS PSSPKQ KSPIGHSRPNSTLDEFEFGTSCRFNLNDVDFDLEDR E+Q
Sbjct: 1   MKMQIKNIEFHSAPSSPKQSKSPIGHSRPNSTLDEFEFGTSCRFNLNDVDFDLEDRTEKQ 60

Query: 61  NKKRMQFEDESLPVMAFADELFSDGKVLPLPPRLKIPPSHERLNENRSGKSSTVSSPRSP 120
           NKK MQ EDESLPVMAFADELFSDGKVLPLPPRLKIPPSHERLNEN SGKSSTVSSPRSP
Sbjct: 61  NKKIMQIEDESLPVMAFADELFSDGKVLPLPPRLKIPPSHERLNENHSGKSSTVSSPRSP 120

Query: 121 VSALKIKFVHQNLWNDEFDPFLVALQSVKKDGAGKAQANRDGSDLAHSSFTPRPNNSSEQ 180
           +SALKIKFVHQNLWNDEFDPFLVALQSVKKDGAGKAQAN DG D AHS+FTPRPNNSSEQ
Sbjct: 121 LSALKIKFVHQNLWNDEFDPFLVALQSVKKDGAGKAQANSDGPDPAHSTFTPRPNNSSEQ 180

Query: 181 MMGLILSHRQPNSKNGAIESPKMFLEPKGLAFARAVANMDLETGTGFNRLTMSGPIMKSN 240
           MMGLILSHRQPNSKNG+IESPKMFLEPKGLAFARAV NMDLETG+GFNRLTMSGPI+KSN
Sbjct: 181 MMGLILSHRQPNSKNGSIESPKMFLEPKGLAFARAVVNMDLETGSGFNRLTMSGPILKSN 240

Query: 241 GNRKDRRRFSTWKRNKLRKVLSLFGKLGLKFARS 275
           GNRKD RRFS WKRNKLRKVLSLFGKLGLKFARS
Sbjct: 241 GNRKDGRRFSPWKRNKLRKVLSLFGKLGLKFARS 274

[Close]

BLAST of CsaV3_6G038850 vs. ExPASy TrEMBL
Match: A0A151U1S1 (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_005850 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 5.8e-30
Identity = 116/305 (38.03%), Postives = 162/305 (53.11%), Query Frame = 0


Query: 10  FHSVPSSPKQCK----SPIG------------HSRPNSTLDEFEFGTSCRFNLNDVDFDL 69
           F+S P+SP   K    SP G            H   NS +DEFEF TS RFN++  D D 
Sbjct: 24  FYSAPTSPSGLKLRPVSPFGSRTGPTTPRATTHEDANSNVDEFEFETSRRFNVSVRDLDT 83

Query: 70  E----DRKEQQNKKRMQFEDESLPVMAFADELFSDGKVLPLP--PRLKIPPSHERLNENR 129
           E    D + QQ K+R+   D SL  MAFADELF DGKVLPL   P LK+PP   RL+++ 
Sbjct: 84  ETNQKDHENQQEKQRLCGGD-SLQTMAFADELFCDGKVLPLMQLPPLKLPP---RLHQSG 143

Query: 130 SGK-----SSTVSSPRSPVSALKIKFVHQNLWNDEFDPFLVALQSVKKDGAGKAQANRDG 189
            G      SST++SPRSP S L+++F   +LWND+FDPF+VAL+ V+++  GK  A R G
Sbjct: 144 DGSIVSTHSSTLTSPRSPGSVLRLQFSRHSLWNDDFDPFMVALEKVREEKRGKPSA-RHG 203

Query: 190 SDLAHSSFTPRP-NNSSEQMMGLILSHRQPNS------------KNGAIESPKMFL---- 249
                S    R  N+ SE+ + +  S +QP S            + G+++     +    
Sbjct: 204 LRRTRSLSPFRGFNHKSEKNVKVSKSSQQPESNCCDTAQLVCELEKGSLKQMSGRINGLS 263

Query: 250 EPKGLAFARAVANMDLETGTGFNRLTMSGPIMKSNGNRKDRRRFSTWKRNKLRKVLS--L 269
           EPKGL F R V  + L   T   R ++S   M++   + + +R   W R+K R+ +   L
Sbjct: 264 EPKGLVFERQVRLVGLSNETTSERTSVSKVEMET--KKDEGKRGGFWTRSKKRENIKKFL 321

[Close]

BLAST of CsaV3_6G038850 vs. ExPASy TrEMBL
Match: A0A5N5JMJ3 (Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_024867 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 4.9e-29
Identity = 106/297 (35.69%), Postives = 147/297 (49.49%), Query Frame = 0


Query: 6   KNIEFHSVPSSPKQCKS--------PIGHSRPNSTLDEFEFGTSCRFNLNDVDFD----L 65
           +N+ F+S P+SP +  S        P  +   NS LD FEF TS R+  +D+D       
Sbjct: 74  ENVCFYSAPTSPAKGTSDLESKPTTPRAYEDANSNLDVFEFETSRRYIADDIDLGDSMRY 133

Query: 66  EDRKEQQNKKRMQFEDESLPVMAFADELFSDGKVLPLPPRLKIPPSHERLNENR-SGKSS 125
           ED  E+Q K + Q   ES P MAFADELF DGKV+PL P    PP H+   + +    SS
Sbjct: 134 EDAMEEQQKNQRQQHKESFPAMAFADELFCDGKVIPLKP----PPCHQYAADGKFDNHSS 193

Query: 126 TVSSPRSPVSALKIKFVHQNLWNDEFDPFLVALQSVKKDGAGKAQ--------------A 185
           T +SP S +  LKI F  +N+WND+FDPF+VAL++VK +  GK Q              A
Sbjct: 194 TPTSPESQMGKLKIPFPRRNVWNDDFDPFMVALKTVKGERKGKWQKINRTRARSMSPIRA 253

Query: 186 NRDGSDLAHSSFTP----RPN-NSSEQMMGLILSHRQPNSKNGAIESPKMFLEPKGLAFA 245
             D  D  H         RPN N+  ++ GL      PN  N + + P+   E KG+ FA
Sbjct: 254 RSDLMDYMHKQCKQLDPIRPNLNNQLELNGLPTRIWIPNVTNASPKCPEWLAESKGVLFA 313

Query: 246 RAVANMDL--ETGTGFNRLTMSGPIMKSNGNRKD------RRRFSTWKRNKLRKVLS 263
           R    M +  E     N+  +  P++K+  N +D      R+    W +N L + LS
Sbjct: 314 RKARLMKIGPEWPGTPNKTALQEPMVKAGENARDKGEPSERKGKRQWMKNFLYRSLS 366

The following BLAST results are available for this feature:

BLAST of CsaV3_6G038850 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN48085.1	1.6e-151	100.00	hypothetical protein Csa_002764 [Cucumis sativus]	[more]
TYJ96101.1	3.1e-142	94.16	hypothetical protein E5676_scaffold182G00630 [Cucumis melo var. makuwa]	[more]
KAA0061759.1	1.3e-140	93.43	hypothetical protein E6C27_scaffold212G001370 [Cucumis melo var. makuwa]	[more]
KAG6570429.1	2.5e-112	76.10	hypothetical protein SDJN03_29344, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023893263.1	9.2e-30	35.50	uncharacterized protein LOC112005248 [Quercus suber]	[more]

BLAST of CsaV3_6G038850 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_6G038850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEI4	7.8e-152	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G429640 PE=4 SV=1	[more]
A0A5D3BBX2	1.5e-142	94.16	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7V7W2	6.2e-141	93.43	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A151U1S1	5.8e-30	38.03	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_005850 PE=4 SV=1	[more]
A0A5N5JMJ3	4.9e-29	35.69	Uncharacterized protein OS=Salix brachista OX=2182728 GN=DKX38_024867 PE=4 SV=1	[more]

BLAST of CsaV3_6G038850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..118
None	No IPR available	PANTHER	PTHR33095	FAMILY NOT NAMED	coord: 7..262
None	No IPR available	PANTHER	PTHR33095:SF47	SUBFAMILY NOT NAMED	coord: 7..262

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G038850.1	CsaV3_6G038850.1	mRNA