CsaV3_6G033880 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G033880
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 18707429 .. 18707908 (-)
RNA-Seq ExpressionCsaV3_6G033880
SyntenyCsaV3_6G033880
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATTAAAAATTCCTTTGATCGGTAAATTGGCAAATCTGATCGGTAAATTGGCAAATCTGAACATGAACAGAGGAGGTTCAGTTTGCCAATACCATCATCGAACGCCTTGTCTTTTCAATTTACTTACAAATTCGTACACTCAAAAAAGGCAATTCGATTCTCCATTTCAAAGCCCGAAGAAGATACGGATCATCATCAATCAAAAACACAATGTTCATCAATAAAATGAAGACCCAAAACCAGCAAATTCTGCCCATTCTGAAGTGCAGCATATCAGTTTTTAATGATCTTTCTTACTGTATGTAAAGTTTACCACATACTTATATGTACAAGCATCTCTGGTTAGTCCACTCGGCTACGCCACTAATAGCCCTGAAATTGAACTGCTAGCTGCAGCTATACGTATGCAGAAGGACAGAGACAGAGACAGAGAGAGAGACCTTGTGTGCCCTGAATCGCACAAACAGGCATTGTAG

mRNA sequence

ATGAAATTAAAAATTCCTTTGATCGGTAAATTGGCAAATCTGATCGGTAAATTGGCAAATCTGAACATGAACAGAGGAGGTTCAGTTTGCCAATACCATCATCGAACGCCTTGTCTTTTCAATTTACTTACAAATTCGTACACTCAAAAAAGGCAATTCGATTCTCCATTTCAAAGCCCGAAGAAGATACGGATCATCATCAATCAAAAACACAATTTTACCACATACTTATATGTACAAGCATCTCTGGTTAGTCCACTCGGCTACGCCACTAATAGCCCTGAAATTGAACTGCTAGCTGCAGCTATACGTATGCAGAAGGACAGAGACAGAGACAGAGAGAGAGACCTTGTGTGCCCTGAATCGCACAAACAGGCATTGTAG

Coding sequence (CDS)

ATGAAATTAAAAATTCCTTTGATCGGTAAATTGGCAAATCTGATCGGTAAATTGGCAAATCTGAACATGAACAGAGGAGGTTCAGTTTGCCAATACCATCATCGAACGCCTTGTCTTTTCAATTTACTTACAAATTCGTACACTCAAAAAAGGCAATTCGATTCTCCATTTCAAAGCCCGAAGAAGATACGGATCATCATCAATCAAAAACACAATTTTACCACATACTTATATGTACAAGCATCTCTGGTTAGTCCACTCGGCTACGCCACTAATAGCCCTGAAATTGAACTGCTAGCTGCAGCTATACGTATGCAGAAGGACAGAGACAGAGACAGAGAGAGAGACCTTGTGTGCCCTGAATCGCACAAACAGGCATTGTAG

Protein sequence

MKLKIPLIGKLANLIGKLANLNMNRGGSVCQYHHRTPCLFNLLTNSYTQKRQFDSPFQSPKKIRIIINQKHNFTTYLYVQASLVSPLGYATNSPEIELLAAAIRMQKDRDRDRERDLVCPESHKQAL*
Homology
[Close]
BLAST of CsaV3_6G033880 vs. NCBI nr
Match: KGN47670.1 (hypothetical protein Csa_018248 [Cucumis sativus])

HSP 1 Score: 257.7 bits (657), Expect = 5.3e-65
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0 

Query: 1   MKLKIPLIGKLANLIGKLANLNMNRGGSVCQYHHRTPCLFNLLTNSYTQKRQFDSPFQSP 60
           MKLKIPLIGKLANLIGKLANLNMNRGGSVCQYHHRTPCLFNLLTNSYTQKRQFDSPFQSP
Sbjct: 1   MKLKIPLIGKLANLIGKLANLNMNRGGSVCQYHHRTPCLFNLLTNSYTQKRQFDSPFQSP 60

Query: 61  KKIRIIINQKHNFTTYLYVQASLVSPLGYATNSPEIELLAAAIRMQKDRDRDRERDLVCP 120
           KKIRIIINQKHNFTTYLYVQASLVSPLGYATNSPEIELLAAAIRMQKDRDRDRERDLVCP
Sbjct: 61  KKIRIIINQKHNFTTYLYVQASLVSPLGYATNSPEIELLAAAIRMQKDRDRDRERDLVCP 120

Query: 121 ESHKQAL 128
           ESHKQAL
Sbjct: 121 ESHKQAL 127

[Close]
BLAST of CsaV3_6G033880 vs. ExPASy TrEMBL
Match: A0A0A0KD93 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G367160 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 2.6e-65
Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0 

Query: 1   MKLKIPLIGKLANLIGKLANLNMNRGGSVCQYHHRTPCLFNLLTNSYTQKRQFDSPFQSP 60
           MKLKIPLIGKLANLIGKLANLNMNRGGSVCQYHHRTPCLFNLLTNSYTQKRQFDSPFQSP
Sbjct: 1   MKLKIPLIGKLANLIGKLANLNMNRGGSVCQYHHRTPCLFNLLTNSYTQKRQFDSPFQSP 60

Query: 61  KKIRIIINQKHNFTTYLYVQASLVSPLGYATNSPEIELLAAAIRMQKDRDRDRERDLVCP 120
           KKIRIIINQKHNFTTYLYVQASLVSPLGYATNSPEIELLAAAIRMQKDRDRDRERDLVCP
Sbjct: 61  KKIRIIINQKHNFTTYLYVQASLVSPLGYATNSPEIELLAAAIRMQKDRDRDRERDLVCP 120

Query: 121 ESHKQAL 128
           ESHKQAL
Sbjct: 121 ESHKQAL 127

The following BLAST results are available for this feature:
BLAST of CsaV3_6G033880 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47670.15.3e-65100.00hypothetical protein Csa_018248 [Cucumis sativus][more]
BLAST of CsaV3_6G033880 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G033880 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KD932.6e-65100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G367160 PE=4 SV=1[more]
BLAST of CsaV3_6G033880 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G033880.1CsaV3_6G033880.1mRNA