CsaV3_6G031290 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G031290
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 17558162 .. 17558317 (+)
RNA-Seq ExpressionCsaV3_6G031290
SyntenyCsaV3_6G031290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTCTATGCAAGCATCTTGGCTTCATGGGTTTGTACATGATAGATGATGCAACTCTATCATGGCGTCCATTGTTTCTTCGGCTTCTACTTCTTGGGTTTGTACATGATAGACGATGCAACTCTATCATGGCGCCCACTGCTGCTGCGACTTATTGG

mRNA sequence

GCTCTATGCAAGCATCTTGGCTTCATGGGTTTGTACATGATAGATGATGCAACTCTATCATGGCGTCCATTGTTTCTTCGGCTTCTACTTCTTGGGTTTGTACATGATAGACGATGCAACTCTATCATGGCGCCCACTGCTGCTGCGACTTATTGG

Coding sequence (CDS)

GCTCTATGCAAGCATCTTGGCTTCATGGGTTTGTACATGATAGATGATGCAACTCTATCATGGCGTCCATTGTTTCTTCGGCTTCTACTTCTTGGGTTTGTACATGATAGACGATGCAACTCTATCATGGCGCCCACTGCTGCTGCGACTTATTGG

Protein sequence

ALCKHLGFMGLYMIDDATLSWRPLFLRLLLLGFVHDRRCNSIMAPTAAATYW
Homology
[Close]
BLAST of CsaV3_6G031290 vs. NCBI nr
Match: KAE8647201.1 (hypothetical protein Csa_018949, partial [Cucumis sativus])

HSP 1 Score: 114.4 bits (285), Expect = 3.0e-22
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0 

Query: 1  ALCKHLGFMGLYMIDDATLSWRPLFLRLLLLGFVHDRRCNSIMAPTAAATYW 53
          ALCKHLGFMGLYMIDDATLSWRPLFLRLLLLGFVHDRRCNSIMAPTAAATYW
Sbjct: 1  ALCKHLGFMGLYMIDDATLSWRPLFLRLLLLGFVHDRRCNSIMAPTAAATYW 52

[Close]
BLAST of CsaV3_6G031290 vs. NCBI nr
Match: KAE8647061.1 (hypothetical protein Csa_023034 [Cucumis sativus])

HSP 1 Score: 72.0 bits (175), Expect = 1.7e-09
Identity = 35/45 (77.78%), Postives = 37/45 (82.22%), Query Frame = 0 

Query: 8  FMGLYMIDDATLSWRPLFLRLLLLGFVHDRRCNSIMAPTAAATYW 53
          F+GLYMIDDAT SWR L LR  LLGFVHDR+CNSIMAP AA T W
Sbjct: 44 FLGLYMIDDATPSWRLLLLR--LLGFVHDRQCNSIMAPIAAVTSW 86

The following BLAST results are available for this feature:
BLAST of CsaV3_6G031290 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8647201.13.0e-22100.00hypothetical protein Csa_018949, partial [Cucumis sativus][more]
KAE8647061.11.7e-0977.78hypothetical protein Csa_023034 [Cucumis sativus][more]
BLAST of CsaV3_6G031290 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G031290 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G031290 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G031290.1CsaV3_6G031290.1mRNA