CsaV3_6G030880 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G030880
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Unknown protein
Location	chr6: 17109699 .. 17109921 (+)
RNA-Seq Expression	CsaV3_6G030880
Synteny	CsaV3_6G030880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGTTGGTGAGAGTATCCCCATAGGCACATATTCATCCCGCGGGGTATTGGAGGAAGACGAAGGGTGGTCCGTGATGGATCCACCCGATGATCCGCTGCCGAAGAGGAGTTGTTCGACCATATATCCGAAACCATCGGGTTCTTCCACTTCAATCGTCTTGGCTCTGGTGGCCCTCGGCGGCTGTGGCGGCGTCTTCAATTTTCGCTTTCTGGACTTTG

mRNA sequence

ATGGGGGTTGGTGAGAGTATCCCCATAGGCACATATTCATCCCGCGGGGTATTGGAGGAAGACGAAGGGTGGTCCGTGATGGATCCACCCGATGATCCGCTGCCGAAGAGGAGTTGTTCGACCATATATCCGAAACCATCGGGTTCTTCCACTTCAATCGTCTTGGCTCTGGTGGCCCTCGGCGGCTGTGGCGGCGTCTTCAATTTTCGCTTTCTGGACTTTG

Coding sequence (CDS)

ATGGGGGTTGGTGAGAGTATCCCCATAGGCACATATTCATCCCGCGGGGTATTGGAGGAAGACGAAGGGTGGTCCGTGATGGATCCACCCGATGATCCGCTGCCGAAGAGGAGTTGTTCGACCATATATCCGAAACCATCGGGTTCTTCCACTTCAATCGTCTTGGCTCTGGTGGCCCTCGGCGGCTGTGGCGGCGTCTTCAATTTTCGCTTTCTGGACTTTG

Protein sequence

MGVGESIPIGTYSSRGVLEEDEGWSVMDPPDDPLPKRSCSTIYPKPSGSSTSIVLALVALGGCGGVFNFRFLDFX

Homology

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BLAST of CsaV3_6G030880 vs. NCBI nr
Match: KAE8647181.1 (hypothetical protein Csa_018910, partial [Cucumis sativus])

HSP 1 Score: 155.6 bits (392), Expect = 1.7e-34
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 1  MGVGESIPIGTYSSRGVLEEDEGWSVMDPPDDPLPKRSCSTIYPKPSGSSTSIVLALVAL 60
          MGVGESIPIGTYSSRGVLEEDEGWSVMDPPDDPLPKRSCSTIYPKPSGSSTSIVLALVAL
Sbjct: 1  MGVGESIPIGTYSSRGVLEEDEGWSVMDPPDDPLPKRSCSTIYPKPSGSSTSIVLALVAL 60

Query: 61 GGCGGVFNFRFLDF 75
          GGCGGVFNFRFLDF
Sbjct: 61 GGCGGVFNFRFLDF 74

The following BLAST results are available for this feature:

BLAST of CsaV3_6G030880 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8647181.1	1.7e-34	100.00	hypothetical protein Csa_018910, partial [Cucumis sativus]	[more]

BLAST of CsaV3_6G030880 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_6G030880 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_6G030880 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G030880.1	CsaV3_6G030880.1	mRNA