CsaV3_6G030880 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G030880
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 17109699 .. 17109921 (+)
RNA-Seq ExpressionCsaV3_6G030880
SyntenyCsaV3_6G030880
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGGTTGGTGAGAGTATCCCCATAGGCACATATTCATCCCGCGGGGTATTGGAGGAAGACGAAGGGTGGTCCGTGATGGATCCACCCGATGATCCGCTGCCGAAGAGGAGTTGTTCGACCATATATCCGAAACCATCGGGTTCTTCCACTTCAATCGTCTTGGCTCTGGTGGCCCTCGGCGGCTGTGGCGGCGTCTTCAATTTTCGCTTTCTGGACTTTG

mRNA sequence

ATGGGGGTTGGTGAGAGTATCCCCATAGGCACATATTCATCCCGCGGGGTATTGGAGGAAGACGAAGGGTGGTCCGTGATGGATCCACCCGATGATCCGCTGCCGAAGAGGAGTTGTTCGACCATATATCCGAAACCATCGGGTTCTTCCACTTCAATCGTCTTGGCTCTGGTGGCCCTCGGCGGCTGTGGCGGCGTCTTCAATTTTCGCTTTCTGGACTTTG

Coding sequence (CDS)

ATGGGGGTTGGTGAGAGTATCCCCATAGGCACATATTCATCCCGCGGGGTATTGGAGGAAGACGAAGGGTGGTCCGTGATGGATCCACCCGATGATCCGCTGCCGAAGAGGAGTTGTTCGACCATATATCCGAAACCATCGGGTTCTTCCACTTCAATCGTCTTGGCTCTGGTGGCCCTCGGCGGCTGTGGCGGCGTCTTCAATTTTCGCTTTCTGGACTTTG

Protein sequence

MGVGESIPIGTYSSRGVLEEDEGWSVMDPPDDPLPKRSCSTIYPKPSGSSTSIVLALVALGGCGGVFNFRFLDFX
Homology
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BLAST of CsaV3_6G030880 vs. NCBI nr
Match: KAE8647181.1 (hypothetical protein Csa_018910, partial [Cucumis sativus])

HSP 1 Score: 155.6 bits (392), Expect = 1.7e-34
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0 

Query: 1  MGVGESIPIGTYSSRGVLEEDEGWSVMDPPDDPLPKRSCSTIYPKPSGSSTSIVLALVAL 60
          MGVGESIPIGTYSSRGVLEEDEGWSVMDPPDDPLPKRSCSTIYPKPSGSSTSIVLALVAL
Sbjct: 1  MGVGESIPIGTYSSRGVLEEDEGWSVMDPPDDPLPKRSCSTIYPKPSGSSTSIVLALVAL 60

Query: 61 GGCGGVFNFRFLDF 75
          GGCGGVFNFRFLDF
Sbjct: 61 GGCGGVFNFRFLDF 74

The following BLAST results are available for this feature:
BLAST of CsaV3_6G030880 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8647181.11.7e-34100.00hypothetical protein Csa_018910, partial [Cucumis sativus][more]
BLAST of CsaV3_6G030880 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G030880 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G030880 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G030880.1CsaV3_6G030880.1mRNA