|
|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGGGAAGATCATGGAAAATCACCGGTTGCCCCCACGGGCTGACGAGTGAGGAGTGCCGACCCCCACCCAAATTTGACGTGTACGGTCATGAGGGGGAAGTGGAGCCGAGCCGATTGACTCACAGCCGACAGAGGAGTCGGCGGTACATGTGAGATGGCACGTGGGGGAACGTGATGGATTTTTATTTTTTGAGTTCTTAACGATGTAAACAAAGGGATTTGACCTCAGTAGATGGATATGGGCCACTTCAGATCTCTGCCGGACAAATTTCCCTTTATTTTAAGAAATGACGCCGCGCCGGACGCTGCCGGCCGGCACCTACACTCTACTTCTTTCCTTCTTAGGAAGCTTCACCGGGTGTACGTGGGGAATTCTTTCACCAAATCATTAATTGACACGTGGTGTACTCAGTACTCTTTAGGGGAATTTTCCCGACACTTGGTAGCTTTTTAATTATAATTTTAATCAACAAATTGGACTTTATGATGTCTAACCTCTCTTGCTAGTTAATAGACAAATGTGTTTATGCTTTGTTTAGGATTCACAGTCTCACACCTGGGAAGATGAAGTTTAA mRNA sequence ATGGGAAGATCATGGAAAATCACCGGTTGCCCCCACGGGCTGACGAGTGAGGAGTGCCGACCCCCACCCAAATTTGACGTGTACGGTCATGAGGGGGAAGTGGAGCCGAGCCGATTGACTCACAGCCGACAGAGGAGTCGGCGGTACATATCTCTGCCGGACAAATTTCCCTTTATTTTAAGAAATGACGCCGCGCCGGACGCTGCCGGCCGGCACCTACACTCTACTTCTTTCCTTCTTAGGAAGCTTCACCGGGTGTACGTGGGGAATTCTTTCACCAAATCATTAATTGACACGTGGTGTACTCAGTACTCTTTAGGGGAATTTTCCCGACACTTGGATTCACAGTCTCACACCTGGGAAGATGAAGTTTAA Coding sequence (CDS) ATGGGAAGATCATGGAAAATCACCGGTTGCCCCCACGGGCTGACGAGTGAGGAGTGCCGACCCCCACCCAAATTTGACGTGTACGGTCATGAGGGGGAAGTGGAGCCGAGCCGATTGACTCACAGCCGACAGAGGAGTCGGCGGTACATATCTCTGCCGGACAAATTTCCCTTTATTTTAAGAAATGACGCCGCGCCGGACGCTGCCGGCCGGCACCTACACTCTACTTCTTTCCTTCTTAGGAAGCTTCACCGGGTGTACGTGGGGAATTCTTTCACCAAATCATTAATTGACACGTGGTGTACTCAGTACTCTTTAGGGGAATTTTCCCGACACTTGGATTCACAGTCTCACACCTGGGAAGATGAAGTTTAA Protein sequence MGRSWKITGCPHGLTSEECRPPPKFDVYGHEGEVEPSRLTHSRQRSRRYISLPDKFPFILRNDAAPDAAGRHLHSTSFLLRKLHRVYVGNSFTKSLIDTWCTQYSLGEFSRHLDSQSHTWEDEV*
Homology
BLAST of CsaV3_6G001090 vs. NCBI nr
Match: KGN45716.1 (hypothetical protein Csa_005014 [Cucumis sativus]) HSP 1 Score: 270.4 bits (690), Expect = 7.8e-69 Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0
Query: 1 MGRSWKITGCPHGLTSEECRPPPKFDVYGHEGEVEPSRLTHSRQRSRRYISLPDKFPFIL 60
MGRSWKITGCPHGLTSEECRPPPKFDVYGHEGEVEPSRLTHSRQRSRRYISLPDKFPFIL
Sbjct: 1 MGRSWKITGCPHGLTSEECRPPPKFDVYGHEGEVEPSRLTHSRQRSRRYISLPDKFPFIL 60
Query: 61 RNDAAPDAAGRHLHSTSFLLRKLHRVYVGNSFTKSLIDTWCTQYSLGEFSRHLDSQSHTW 120
RNDAAPDAAGRHLHSTSFLLRKLHRVYVGNSFTKSLIDTWCTQYSLGEFSRHLDSQSHTW
Sbjct: 61 RNDAAPDAAGRHLHSTSFLLRKLHRVYVGNSFTKSLIDTWCTQYSLGEFSRHLDSQSHTW 120
Query: 121 EDEV 125
EDEV
Sbjct: 121 EDEV 124
BLAST of CsaV3_6G001090 vs. ExPASy TrEMBL
Match: A0A0A0KD54 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G007990 PE=4 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 3.8e-69 Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0
Query: 1 MGRSWKITGCPHGLTSEECRPPPKFDVYGHEGEVEPSRLTHSRQRSRRYISLPDKFPFIL 60
MGRSWKITGCPHGLTSEECRPPPKFDVYGHEGEVEPSRLTHSRQRSRRYISLPDKFPFIL
Sbjct: 1 MGRSWKITGCPHGLTSEECRPPPKFDVYGHEGEVEPSRLTHSRQRSRRYISLPDKFPFIL 60
Query: 61 RNDAAPDAAGRHLHSTSFLLRKLHRVYVGNSFTKSLIDTWCTQYSLGEFSRHLDSQSHTW 120
RNDAAPDAAGRHLHSTSFLLRKLHRVYVGNSFTKSLIDTWCTQYSLGEFSRHLDSQSHTW
Sbjct: 61 RNDAAPDAAGRHLHSTSFLLRKLHRVYVGNSFTKSLIDTWCTQYSLGEFSRHLDSQSHTW 120
Query: 121 EDEV 125
EDEV
Sbjct: 121 EDEV 124
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KGN45716.1 | 7.8e-69 | 100.00 | hypothetical protein Csa_005014 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KD54 | 3.8e-69 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G007990 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
|
