CsaV3_6G001090 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G001090
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 740631 .. 741205 (-)
RNA-Seq ExpressionCsaV3_6G001090
SyntenyCsaV3_6G001090
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAGATCATGGAAAATCACCGGTTGCCCCCACGGGCTGACGAGTGAGGAGTGCCGACCCCCACCCAAATTTGACGTGTACGGTCATGAGGGGGAAGTGGAGCCGAGCCGATTGACTCACAGCCGACAGAGGAGTCGGCGGTACATGTGAGATGGCACGTGGGGGAACGTGATGGATTTTTATTTTTTGAGTTCTTAACGATGTAAACAAAGGGATTTGACCTCAGTAGATGGATATGGGCCACTTCAGATCTCTGCCGGACAAATTTCCCTTTATTTTAAGAAATGACGCCGCGCCGGACGCTGCCGGCCGGCACCTACACTCTACTTCTTTCCTTCTTAGGAAGCTTCACCGGGTGTACGTGGGGAATTCTTTCACCAAATCATTAATTGACACGTGGTGTACTCAGTACTCTTTAGGGGAATTTTCCCGACACTTGGTAGCTTTTTAATTATAATTTTAATCAACAAATTGGACTTTATGATGTCTAACCTCTCTTGCTAGTTAATAGACAAATGTGTTTATGCTTTGTTTAGGATTCACAGTCTCACACCTGGGAAGATGAAGTTTAA

mRNA sequence

ATGGGAAGATCATGGAAAATCACCGGTTGCCCCCACGGGCTGACGAGTGAGGAGTGCCGACCCCCACCCAAATTTGACGTGTACGGTCATGAGGGGGAAGTGGAGCCGAGCCGATTGACTCACAGCCGACAGAGGAGTCGGCGGTACATATCTCTGCCGGACAAATTTCCCTTTATTTTAAGAAATGACGCCGCGCCGGACGCTGCCGGCCGGCACCTACACTCTACTTCTTTCCTTCTTAGGAAGCTTCACCGGGTGTACGTGGGGAATTCTTTCACCAAATCATTAATTGACACGTGGTGTACTCAGTACTCTTTAGGGGAATTTTCCCGACACTTGGATTCACAGTCTCACACCTGGGAAGATGAAGTTTAA

Coding sequence (CDS)

ATGGGAAGATCATGGAAAATCACCGGTTGCCCCCACGGGCTGACGAGTGAGGAGTGCCGACCCCCACCCAAATTTGACGTGTACGGTCATGAGGGGGAAGTGGAGCCGAGCCGATTGACTCACAGCCGACAGAGGAGTCGGCGGTACATATCTCTGCCGGACAAATTTCCCTTTATTTTAAGAAATGACGCCGCGCCGGACGCTGCCGGCCGGCACCTACACTCTACTTCTTTCCTTCTTAGGAAGCTTCACCGGGTGTACGTGGGGAATTCTTTCACCAAATCATTAATTGACACGTGGTGTACTCAGTACTCTTTAGGGGAATTTTCCCGACACTTGGATTCACAGTCTCACACCTGGGAAGATGAAGTTTAA

Protein sequence

MGRSWKITGCPHGLTSEECRPPPKFDVYGHEGEVEPSRLTHSRQRSRRYISLPDKFPFILRNDAAPDAAGRHLHSTSFLLRKLHRVYVGNSFTKSLIDTWCTQYSLGEFSRHLDSQSHTWEDEV*
Homology
[Close]
BLAST of CsaV3_6G001090 vs. NCBI nr
Match: KGN45716.1 (hypothetical protein Csa_005014 [Cucumis sativus])

HSP 1 Score: 270.4 bits (690), Expect = 7.8e-69
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0 

Query: 1   MGRSWKITGCPHGLTSEECRPPPKFDVYGHEGEVEPSRLTHSRQRSRRYISLPDKFPFIL 60
           MGRSWKITGCPHGLTSEECRPPPKFDVYGHEGEVEPSRLTHSRQRSRRYISLPDKFPFIL
Sbjct: 1   MGRSWKITGCPHGLTSEECRPPPKFDVYGHEGEVEPSRLTHSRQRSRRYISLPDKFPFIL 60

Query: 61  RNDAAPDAAGRHLHSTSFLLRKLHRVYVGNSFTKSLIDTWCTQYSLGEFSRHLDSQSHTW 120
           RNDAAPDAAGRHLHSTSFLLRKLHRVYVGNSFTKSLIDTWCTQYSLGEFSRHLDSQSHTW
Sbjct: 61  RNDAAPDAAGRHLHSTSFLLRKLHRVYVGNSFTKSLIDTWCTQYSLGEFSRHLDSQSHTW 120

Query: 121 EDEV 125
           EDEV
Sbjct: 121 EDEV 124

[Close]
BLAST of CsaV3_6G001090 vs. ExPASy TrEMBL
Match: A0A0A0KD54 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G007990 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 3.8e-69
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0 

Query: 1   MGRSWKITGCPHGLTSEECRPPPKFDVYGHEGEVEPSRLTHSRQRSRRYISLPDKFPFIL 60
           MGRSWKITGCPHGLTSEECRPPPKFDVYGHEGEVEPSRLTHSRQRSRRYISLPDKFPFIL
Sbjct: 1   MGRSWKITGCPHGLTSEECRPPPKFDVYGHEGEVEPSRLTHSRQRSRRYISLPDKFPFIL 60

Query: 61  RNDAAPDAAGRHLHSTSFLLRKLHRVYVGNSFTKSLIDTWCTQYSLGEFSRHLDSQSHTW 120
           RNDAAPDAAGRHLHSTSFLLRKLHRVYVGNSFTKSLIDTWCTQYSLGEFSRHLDSQSHTW
Sbjct: 61  RNDAAPDAAGRHLHSTSFLLRKLHRVYVGNSFTKSLIDTWCTQYSLGEFSRHLDSQSHTW 120

Query: 121 EDEV 125
           EDEV
Sbjct: 121 EDEV 124

The following BLAST results are available for this feature:
BLAST of CsaV3_6G001090 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN45716.17.8e-69100.00hypothetical protein Csa_005014 [Cucumis sativus][more]
BLAST of CsaV3_6G001090 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G001090 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KD543.8e-69100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G007990 PE=4 SV=1[more]
BLAST of CsaV3_6G001090 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G001090.1CsaV3_6G001090.1mRNA