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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGTTTGATGATTATACGTATTAATATAAATTATATAGTTTAGGCATAATTATATTACCTTCCTTATTTACTTTCTATCGTTTCTGTATTTATGCACAATTTGATCCCCACGTAAACACACATAATATTTATCAATAAAATATTCTCCACATGGTATCAGAGCTGTAGCTAGATCTACTGTACCTGTCACCGTCGTGGCGATCTCTGCCGTGAAATCCATTGATGACCAAATCCTTCATCTCATTTTCGTTTGCCGTCAATCTCTGTCTATAGATCTCTACTCAGATTCGACCATATTCGTTCGCCGTTCAACGTTCGACGAAATCTTATTCTCTGTTCGCCGTCGGTCTCTGTCCATAGATCTCTGCTCGCTCCTCGTTCAGATCTGAAGAACGAATTTCACAATCTGCTTCGCGTGTCACGATCATCGTTGATCTCTGCATCTATCGTTCGCAACTCACGAATCTTCTTCGTGATTCATAGATCACGTATCATTTACGCGTCGTTCAGTTGCAAATCTTGCTCAGCAGCGTCGACGCCCAACCACGATTGCTCGCAACCCAGATCCGACGAAGCCCAATCGAAGAAATTCGATTTCGTCCACGTTAGTCGCGATTTGTGGTTGGCGCTTCTGCTTCCGTTACTCTTAAAACGTGCGATTTCAAATATTTGA mRNA sequence ATGTTTGATGATTATACATTCGACCATATTCGTTCGCCGTTCAACGTTCGACGAAATCTTATTCTCTGTTCGCCGTCGGTCTCTGTCCATAGATCTCTGCTCGCTCCTCGTTCAGATCTGAAGAACGAATTTCACAATCTGCTTCGCGTGTCACGATCATCGTTGATCTCTGCATCTATCGTTCGCAACTCACGAATCTTCTTCGTGATTCATAGATCACGTATCATTTACGCGTCGTTCAGTTGCAAATCTTGCTCAGCAGCGTCGACGCCCAACCACGATTGCTCGCAACCCAGATCCGACGAAGCCCAATCGAAGAAATTCGATTTCGTCCACGTTAGTCGCGATTTGTGGTTGGCGCTTCTGCTTCCGTTACTCTTAAAACGTGCGATTTCAAATATTTGA Coding sequence (CDS) ATGTTTGATGATTATACATTCGACCATATTCGTTCGCCGTTCAACGTTCGACGAAATCTTATTCTCTGTTCGCCGTCGGTCTCTGTCCATAGATCTCTGCTCGCTCCTCGTTCAGATCTGAAGAACGAATTTCACAATCTGCTTCGCGTGTCACGATCATCGTTGATCTCTGCATCTATCGTTCGCAACTCACGAATCTTCTTCGTGATTCATAGATCACGTATCATTTACGCGTCGTTCAGTTGCAAATCTTGCTCAGCAGCGTCGACGCCCAACCACGATTGCTCGCAACCCAGATCCGACGAAGCCCAATCGAAGAAATTCGATTTCGTCCACGTTAGTCGCGATTTGTGGTTGGCGCTTCTGCTTCCGTTACTCTTAAAACGTGCGATTTCAAATATTTGA Protein sequence MFDDYTFDHIRSPFNVRRNLILCSPSVSVHRSLLAPRSDLKNEFHNLLRVSRSSLISASIVRNSRIFFVIHRSRIIYASFSCKSCSAASTPNHDCSQPRSDEAQSKKFDFVHVSRDLWLALLLPLLLKRAISNI*
Homology
BLAST of CsaV3_5G014220 vs. NCBI nr
Match: KGN49590.1 (hypothetical protein Csa_018511 [Cucumis sativus]) HSP 1 Score: 264.6 bits (675), Expect = 4.6e-67 Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0
Query: 1 MFDDYTFDHIRSPFNVRRNLILCSPSVSVHRSLLAPRSDLKNEFHNLLRVSRSSLISASI 60
MFDDYTFDHIRSPFNVRRNLILCSPSVSVHRSLLAPRSDLKNEFHNLLRVSRSSLISASI
Sbjct: 1 MFDDYTFDHIRSPFNVRRNLILCSPSVSVHRSLLAPRSDLKNEFHNLLRVSRSSLISASI 60
Query: 61 VRNSRIFFVIHRSRIIYASFSCKSCSAASTPNHDCSQPRSDEAQSKKFDFVHVSRDLWLA 120
VRNSRIFFVIHRSRIIYASFSCKSCSAASTPNHDCSQPRSDEAQSKKFDFVHVSRDLWLA
Sbjct: 61 VRNSRIFFVIHRSRIIYASFSCKSCSAASTPNHDCSQPRSDEAQSKKFDFVHVSRDLWLA 120
Query: 121 LLLPLLLKRAISNI 135
LLLPLLLKRAISNI
Sbjct: 121 LLLPLLLKRAISNI 134
BLAST of CsaV3_5G014220 vs. ExPASy TrEMBL
Match: A0A0A0KIQ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G013780 PE=4 SV=1) HSP 1 Score: 264.6 bits (675), Expect = 2.2e-67 Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0
Query: 1 MFDDYTFDHIRSPFNVRRNLILCSPSVSVHRSLLAPRSDLKNEFHNLLRVSRSSLISASI 60
MFDDYTFDHIRSPFNVRRNLILCSPSVSVHRSLLAPRSDLKNEFHNLLRVSRSSLISASI
Sbjct: 1 MFDDYTFDHIRSPFNVRRNLILCSPSVSVHRSLLAPRSDLKNEFHNLLRVSRSSLISASI 60
Query: 61 VRNSRIFFVIHRSRIIYASFSCKSCSAASTPNHDCSQPRSDEAQSKKFDFVHVSRDLWLA 120
VRNSRIFFVIHRSRIIYASFSCKSCSAASTPNHDCSQPRSDEAQSKKFDFVHVSRDLWLA
Sbjct: 61 VRNSRIFFVIHRSRIIYASFSCKSCSAASTPNHDCSQPRSDEAQSKKFDFVHVSRDLWLA 120
Query: 121 LLLPLLLKRAISNI 135
LLLPLLLKRAISNI
Sbjct: 121 LLLPLLLKRAISNI 134
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KGN49590.1 | 4.6e-67 | 100.00 | hypothetical protein Csa_018511 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KIQ1 | 2.2e-67 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G013780 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
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