CsaV3_5G005870 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G005870
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr5: 3879954 .. 3880198 (+)
RNA-Seq ExpressionCsaV3_5G005870
SyntenyCsaV3_5G005870
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGGCGACTGTAGTTGGATGCAGCGGGAACATTGCAACTCCGTCAGCACCAAATCCGGCACTCCACACGCTCCACACGTGGAAATGTCTCGTCGGTACGGTCACAGCCCTTTTCCCTTTTCCATATTTCTTACACACGTGCCCATTCACACACGTGTCAAAGTGTCGGTAGCCATCTAATTGAGCACCTTCCCAAGCTGCATCTTCACTCTACCGATCACCGCCACGTGTCAATCATGTAG

mRNA sequence

ATGACTGGCGACTGTAGTTGGATGCAGCGGGAACATTGCAACTCCGTCAGCACCAAATCCGGCACTCCACACGCTCCACACGTGGAAATGTCTCGTCGCCATCTAATTGAGCACCTTCCCAAGCTGCATCTTCACTCTACCGATCACCGCCACGTGTCAATCATGTAG

Coding sequence (CDS)

ATGACTGGCGACTGTAGTTGGATGCAGCGGGAACATTGCAACTCCGTCAGCACCAAATCCGGCACTCCACACGCTCCACACGTGGAAATGTCTCGTCGCCATCTAATTGAGCACCTTCCCAAGCTGCATCTTCACTCTACCGATCACCGCCACGTGTCAATCATGTAG

Protein sequence

MTGDCSWMQREHCNSVSTKSGTPHAPHVEMSRRHLIEHLPKLHLHSTDHRHVSIM*
Homology
[Close]
BLAST of CsaV3_5G005870 vs. NCBI nr
Match: KGN50429.1 (hypothetical protein Csa_000504 [Cucumis sativus])

HSP 1 Score: 122.1 bits (305), Expect = 1.5e-24
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0 

Query: 1  MTGDCSWMQREHCNSVSTKSGTPHAPHVEMSRRHLIEHLPKLHLHSTDHRHVSIM 56
          MTGDCSWMQREHCNSVSTKSGTPHAPHVEMSRRHLIEHLPKLHLHSTDHRHVSIM
Sbjct: 1  MTGDCSWMQREHCNSVSTKSGTPHAPHVEMSRRHLIEHLPKLHLHSTDHRHVSIM 55

[Close]
BLAST of CsaV3_5G005870 vs. ExPASy TrEMBL
Match: A0A0A0KNG2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G173560 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 7.4e-25
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0 

Query: 1  MTGDCSWMQREHCNSVSTKSGTPHAPHVEMSRRHLIEHLPKLHLHSTDHRHVSIM 56
          MTGDCSWMQREHCNSVSTKSGTPHAPHVEMSRRHLIEHLPKLHLHSTDHRHVSIM
Sbjct: 1  MTGDCSWMQREHCNSVSTKSGTPHAPHVEMSRRHLIEHLPKLHLHSTDHRHVSIM 55

The following BLAST results are available for this feature:
BLAST of CsaV3_5G005870 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN50429.11.5e-24100.00hypothetical protein Csa_000504 [Cucumis sativus][more]
BLAST of CsaV3_5G005870 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_5G005870 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KNG27.4e-25100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G173560 PE=4 SV=1[more]
BLAST of CsaV3_5G005870 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G005870.1CsaV3_5G005870.1mRNA