CsaV3_4G036620 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G036620
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 25742063 .. 25742320 (+)
RNA-Seq ExpressionCsaV3_4G036620
SyntenyCsaV3_4G036620
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGAGATCAGTTCCTACAGGTTGCAATGTTGATTGATAAAATTGGTCTCTACCAAGGCTACTATGGAAGATATTTTCTTTTGTTTCGTTTTGGGTCTAAGACAATCCTTTAGGCATGGGTATGTCTCATCGAAATTTTGTTTTAGTTGACCTTAGTCCATTATCTAGGCTCGTTTTGGTCATCGGTGTCGCTTTTGGTCCAAATTTTGTTGCTTTTATAGTATGTGATATGCTCTTTGATCCAAAGTCATCATGA

mRNA sequence

ATGTCGAGATCAGTTCCTACAGACAATCCTTTAGGCATGGGTATGTCTCATCGAAATTTTGTTTTAGTTGACCTTAGTCCATTATCTAGGCTCGTTTTGGTCATCGGTGTCGCTTTTGGTCCAAATTTTGTTGCTTTTATAGTATGTGATATGCTCTTTGATCCAAAGTCATCATGA

Coding sequence (CDS)

ATGTCGAGATCAGTTCCTACAGACAATCCTTTAGGCATGGGTATGTCTCATCGAAATTTTGTTTTAGTTGACCTTAGTCCATTATCTAGGCTCGTTTTGGTCATCGGTGTCGCTTTTGGTCCAAATTTTGTTGCTTTTATAGTATGTGATATGCTCTTTGATCCAAAGTCATCATGA

Protein sequence

MSRSVPTDNPLGMGMSHRNFVLVDLSPLSRLVLVIGVAFGPNFVAFIVCDMLFDPKSS*
Homology
[Close]
BLAST of CsaV3_4G036620 vs. NCBI nr
Match: KGN55435.1 (hypothetical protein Csa_012187 [Cucumis sativus])

HSP 1 Score: 119.8 bits (299), Expect = 8.0e-24
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0 

Query: 1  MSRSVPTDNPLGMGMSHRNFVLVDLSPLSRLVLVIGVAFGPNFVAFIVCDMLFDPKSS 59
          MSRSVPTDNPLGMGMSHRNFVLVDLSPLSRLVLVIGVAFGPNFVAFIVCDMLFDPKSS
Sbjct: 1  MSRSVPTDNPLGMGMSHRNFVLVDLSPLSRLVLVIGVAFGPNFVAFIVCDMLFDPKSS 58

[Close]
BLAST of CsaV3_4G036620 vs. ExPASy TrEMBL
Match: A0A0A0L0E0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652010 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.9e-24
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0 

Query: 1  MSRSVPTDNPLGMGMSHRNFVLVDLSPLSRLVLVIGVAFGPNFVAFIVCDMLFDPKSS 59
          MSRSVPTDNPLGMGMSHRNFVLVDLSPLSRLVLVIGVAFGPNFVAFIVCDMLFDPKSS
Sbjct: 1  MSRSVPTDNPLGMGMSHRNFVLVDLSPLSRLVLVIGVAFGPNFVAFIVCDMLFDPKSS 58

The following BLAST results are available for this feature:
BLAST of CsaV3_4G036620 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN55435.18.0e-24100.00hypothetical protein Csa_012187 [Cucumis sativus][more]
BLAST of CsaV3_4G036620 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G036620 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0E03.9e-24100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G652010 PE=4 SV=1[more]
BLAST of CsaV3_4G036620 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G036620.1CsaV3_4G036620.1mRNA