CsaV3_4G031520 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G031520
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 21982217 .. 21983026 (+)
RNA-Seq ExpressionCsaV3_4G031520
SyntenyCsaV3_4G031520
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTCCCCCTTCTCTCTTCTTCCTTCTTCCATTCTCGGAATCCCCGTTTCTTCCTCCTCCTGATTCTCTGGTCACTTCCTTCTCTCTTTTTTCCTTCCATTCTTCATCCCATTACTTCTCTTTTTCTCACTTTTCTGTGTTTCCCTTTTTCACTCAGGACATTGCAACGGAATTCAGATGCTCTACTCCTCCTGCTGCTGCGTCCCACTCTGTTTTTGTTTTGGTCCTTAGATCTCATTTCCTTCTTTTGCCTTCCTTTTTCTTTCCCAGCTTTATTCCCTCTTTTTCTTTTTCTTTTTCTTTGTCTTTATCTTTTACTGCTCTCTAGATTTGGTTTTCCAACTTCCTGTAGTTTTTTTTTTTTTTTTTTGTTTCTAATGAGCTTCGACTTCGCTTTCGAACTATGGATGCTTTCTTCTTTTAACCTTTTTTAACTTCCGCTTCATGAATCTTGCGTTTCTGTTATGCAATGTGAGATGATTATTTGTTAAAATATTTGGAAATCTCTTTTTCTCTTTAATTCTGTTTTGTTTTTTAGTTCTTGTCGGTGTAGCGAGAGACCAGGTTTGGGAGTTGTTAGATCCTTGTAATTATGTTTTTCAATTGGTTTGAGGATACAGAGTGTGGGATTCCTTCTATAGTTGCTGTAATATTCTGAATTTCTTTGTACCTTTTGGATTCATTTGAAGAGGATGGTGATTGAATGTTTGATTGCTGTAATCCTTGATTGAAGTTGGCGGCTACTGTTTCTGACTTTGAGATTTTGATGGATTTAGTACATTACGATGAGCGACTGCTCATCTATTGA

mRNA sequence

ATGTTTCCCCCTTCTCTCTTCTTCCTTCTTCCATTCTCGGAATCCCCGTTTCTTCCTCCTCCTGATTCTCTGGACATTGCAACGGAATTCAGATGCTCTACTCCTCCTGCTGCTGCGTCCCACTCTGTTTTTGTTTTGGATACAGAGTGTGGGATTCCTTCTATAGTTGCTTTGGCGGCTACTGTTTCTGACTTTGAGATTTTGATGGATTTAGTACATTACGATGAGCGACTGCTCATCTATTGA

Coding sequence (CDS)

ATGTTTCCCCCTTCTCTCTTCTTCCTTCTTCCATTCTCGGAATCCCCGTTTCTTCCTCCTCCTGATTCTCTGGACATTGCAACGGAATTCAGATGCTCTACTCCTCCTGCTGCTGCGTCCCACTCTGTTTTTGTTTTGGATACAGAGTGTGGGATTCCTTCTATAGTTGCTTTGGCGGCTACTGTTTCTGACTTTGAGATTTTGATGGATTTAGTACATTACGATGAGCGACTGCTCATCTATTGA

Protein sequence

MFPPSLFFLLPFSESPFLPPPDSLDIATEFRCSTPPAAASHSVFVLDTECGIPSIVALAATVSDFEILMDLVHYDERLLIY*
Homology
[Close]
BLAST of CsaV3_4G031520 vs. NCBI nr
Match: KGN54891.1 (hypothetical protein Csa_012629 [Cucumis sativus])

HSP 1 Score: 161.0 bits (406), Expect = 4.4e-36
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0 

Query: 1  MFPPSLFFLLPFSESPFLPPPDSLDIATEFRCSTPPAAASHSVFVLDTECGIPSIVALAA 60
          MFPPSLFFLLPFSESPFLPPPDSLDIATEFRCSTPPAAASHSVFVLDTECGIPSIVALAA
Sbjct: 1  MFPPSLFFLLPFSESPFLPPPDSLDIATEFRCSTPPAAASHSVFVLDTECGIPSIVALAA 60

Query: 61 TVSDFEILMDLVHYDERLLIY 82
          TVSDFEILMDLVHYDERLLIY
Sbjct: 61 TVSDFEILMDLVHYDERLLIY 81

[Close]
BLAST of CsaV3_4G031520 vs. ExPASy TrEMBL
Match: A0A0A0L432 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G572850 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.1e-36
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0 

Query: 1  MFPPSLFFLLPFSESPFLPPPDSLDIATEFRCSTPPAAASHSVFVLDTECGIPSIVALAA 60
          MFPPSLFFLLPFSESPFLPPPDSLDIATEFRCSTPPAAASHSVFVLDTECGIPSIVALAA
Sbjct: 1  MFPPSLFFLLPFSESPFLPPPDSLDIATEFRCSTPPAAASHSVFVLDTECGIPSIVALAA 60

Query: 61 TVSDFEILMDLVHYDERLLIY 82
          TVSDFEILMDLVHYDERLLIY
Sbjct: 61 TVSDFEILMDLVHYDERLLIY 81

The following BLAST results are available for this feature:
BLAST of CsaV3_4G031520 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN54891.14.4e-36100.00hypothetical protein Csa_012629 [Cucumis sativus][more]
BLAST of CsaV3_4G031520 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G031520 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L4322.1e-36100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G572850 PE=4 SV=1[more]
BLAST of CsaV3_4G031520 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G031520.1CsaV3_4G031520.1mRNA