CsaV3_4G030640 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTACTTCTATTCGGGTTTGCTTGCCAGTGAGAGAGGTAACATTGATGTTGCAGTAGAAGGTGCTCCAACTGAGGCCAAGGCACTCATTTCCACCGTGGTTGAAAACTCTCAACATTTTGGAACTCGATCGACCAACATTTACCCTTCAAATTCAAGTAAGGTAAATGAACTACGTTCTTAATTATCTTACTTAACCACTCTTTTGAAACAGATGACAACTGGAGGACACATTCAACAAAGCATGGTTAGTGGAGTATGTTCAATGATCGGTCATGCCCTCAAGTACAGCAATGAGTGA ATGTACTTCTATTCGGGTTTGCTTGCCAGTGAGAGAGGTAACATTGATGTTGCAGTAGAAGGTGCTCCAACTGAGGCCAAGGCACTCATTTCCACCGTGGTTGAAAACTCTCAACATTTTGGAACTCGATCGACCAACATTTACCCTTCAAATTCAAGTAAGATGACAACTGGAGGACACATTCAACAAAGCATGGTTAGTGGAGTATGTTCAATGATCGGTCATGCCCTCAAGTACAGCAATGAGTGA ATGTACTTCTATTCGGGTTTGCTTGCCAGTGAGAGAGGTAACATTGATGTTGCAGTAGAAGGTGCTCCAACTGAGGCCAAGGCACTCATTTCCACCGTGGTTGAAAACTCTCAACATTTTGGAACTCGATCGACCAACATTTACCCTTCAAATTCAAGTAAGATGACAACTGGAGGACACATTCAACAAAGCATGGTTAGTGGAGTATGTTCAATGATCGGTCATGCCCTCAAGTACAGCAATGAGTGA MYFYSGLLASERGNIDVAVEGAPTEAKALISTVVENSQHFGTRSTNIYPSNSSKMTTGGHIQQSMVSGVCSMIGHALKYSNE* Homology
BLAST of CsaV3_4G030640 vs. NCBI nr
Match: KAE8649726.1 (hypothetical protein Csa_012965 [Cucumis sativus]) HSP 1 Score: 164.9 bits (416), Expect = 3.1e-37 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
BLAST of CsaV3_4G030640 vs. NCBI nr
Match: XP_031091054.1 (uncharacterized protein LOC115996048 [Ipomoea triloba]) HSP 1 Score: 58.2 bits (139), Expect = 4.0e-05 Identity = 38/96 (39.58%), Postives = 51/96 (53.12%), Query Frame = 0
BLAST of CsaV3_4G030640 vs. NCBI nr
Match: XP_019180076.1 (PREDICTED: uncharacterized protein LOC109175288 [Ipomoea nil]) HSP 1 Score: 57.0 bits (136), Expect = 9.0e-05 Identity = 36/96 (37.50%), Postives = 51/96 (53.12%), Query Frame = 0
BLAST of CsaV3_4G030640 vs. NCBI nr
Match: XP_038876529.1 (uncharacterized protein LOC120068960 [Benincasa hispida]) HSP 1 Score: 56.6 bits (135), Expect = 1.2e-04 Identity = 35/80 (43.75%), Postives = 46/80 (57.50%), Query Frame = 0
BLAST of CsaV3_4G030640 vs. NCBI nr
Match: KAA0025369.1 (uncharacterized protein E6C27_scaffold1204G00530 [Cucumis melo var. makuwa] >TYK23432.1 uncharacterized protein E5676_scaffold605G00340 [Cucumis melo var. makuwa]) HSP 1 Score: 56.2 bits (134), Expect = 1.5e-04 Identity = 32/79 (40.51%), Postives = 48/79 (60.76%), Query Frame = 0
BLAST of CsaV3_4G030640 vs. ExPASy TrEMBL
Match: A0A5D3DIP6 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold605G00340 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 7.4e-05 Identity = 32/79 (40.51%), Postives = 48/79 (60.76%), Query Frame = 0
BLAST of CsaV3_4G030640 vs. ExPASy TrEMBL
Match: A0A5D3CZ23 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G00950 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.8e-04 Identity = 32/79 (40.51%), Postives = 44/79 (55.70%), Query Frame = 0
BLAST of CsaV3_4G030640 vs. ExPASy TrEMBL
Match: A0A484N1X8 (Retrotrans_gag domain-containing protein (Fragment) OS=Cuscuta campestris OX=132261 GN=CCAM_LOCUS36869 PE=4 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 4.8e-04 Identity = 33/97 (34.02%), Postives = 48/97 (49.48%), Query Frame = 0
BLAST of CsaV3_4G030640 vs. ExPASy TrEMBL
Match: A0A5A7V0Q7 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold753G00020 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 6.3e-04 Identity = 37/95 (38.95%), Postives = 48/95 (50.53%), Query Frame = 0
BLAST of CsaV3_4G030640 vs. ExPASy TrEMBL
Match: A0A5A7USL5 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G004630 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 6.3e-04 Identity = 36/95 (37.89%), Postives = 48/95 (50.53%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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