CsaV3_4G030480 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_4G030480
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	transcription termination factor MTEF18, mitochondrial-like
Location	chr4: 20348467 .. 20351322 (-)
RNA-Seq Expression	CsaV3_4G030480
Synteny	CsaV3_4G030480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTATTTTTGTAAATGAGCCCCCGAAACAAACCTGAAATTCATAGAGCAGCATCGGAGCACTTGTAAAACCTTCTCGTATTCTCAATCTACAAATTCTCAATGGCAAAGCATTAGTATTATCTCATTAGTTTTTTCAATCTCAATCACAGCTGAAGTTCTCAATCTTCCGAAGAGGTACCGTTTGAAATTTTAATTTTTGGTTTATATGTAGCTTGAACTGCATACATTGTGTCTTCTGTCATGTCGTACTTGCAAAACCTCAGAGCACTTTCCATGCTTTCTTCTTCCATTATTGCTGATAGCAAGTTTAACTTTGTTAGAGTCTTGTATTGGCGATTTGGGTTTCCCTCTGTTGCTTCAAACCCTAGATTTTATGGAAATAAAAAGGCTCCTCAAACGGAAGAACATAAAAATTCTGGAGGAATGTTGAATATGCGTAGTAGAAACGGTCGTCGGATTTCTCGGGCCACTATTAAGGAAGCTCAGGCTGCGATGTTGGAGTATTTACATTCTACTCGAGGGATTCAATTTTTCGATGCTGATATTATGAGTAAAAATTCCCCAATCTTTCTTAAAAAGCTTCTAGGAAGAGTTGAACATGAGGGTGATATTGGTCGGTCAATTATTCGATTTTTACGATATCATCCGATTAATGAGTTCGAGCCTTTCTTTGAGAGCGTGGGCTTGCAACCTGCAGAGTATAATGCGTTTCTTCCACGCAATTTGATGTTCTTGAGTGATGATGATTTATTGCTTGAGAACTTTCATGTGTTGTTTAACTATGGAGTTGAACGAAATAAGACAGGGAAGATATATAAGGAGGTAACTCAAATATTTCGGTATGAGTATGGTGTTTTGCTATCCAAGTTAAAAGCATATGAAAAACTTGGTCTCAGCCAAGCTAAAGTCGCTAATATTGTTGTTTGTAACCCCTATCTATTGATTGGTGGTGTTAATGATCGGTTTGTCAAGGTATTAGAAAAATTGGAGAACATTGGATTTGAATTAAGCTGGGTTGAAGAACAACTGACGGATGGTAATTCCTATAATTGGAAGCAAATTCTTGGGTTACTTTTCTGGTTTGAACAGATGGGTTGCGGTAAGGAGAAGTTGGCTGATTTAATCAGCCAACGTCCAGATCTTTTATTGGAGGATTCAGGAAGCAAATCACTTACCTTAATTGGGTTGTTACTGAAAATGGGATGCTCAATGGTCCAGATATGTTCCGTGTTCTTGCAATTTCCTCAAATCCGAGTTGGTGAGTTTGTATCAAATATGAGGCAATGCTTTTTGGTCTTCAATGAAATAAACATGGATGTGCAAGAGATAGGATACCTTTTCAGATCTCGTCCCTTGTTATTGGGATTGTATACTTTGAAAAGGGCTAAAAGCTTGCTTGGTAGCTTGAATGTTGGGAAGCAACGGCTCTGTCAATTTCTTTTAGAGAATCCAGAAGAATTGAAGAACTTGCGAATTGGAAAAAGAGTTCTACGATTACCAGACTCTGGAGAGGTTATGAGATCAAAGCAACAGAAAACTCAGTTCTTGTTGAAATTAGGACTGGAAGAAAACTCAACAGAGATGAAAGAAGCGTTAAAGGTGTTTCGAGGTAAAGTAGCGATACTCCAAGAGCGGTTTGATTGTATTGTGGAAGCTGGCATTGATAAGAAGGATGTTTACAAAATGATTAAAGTTTGTCCACGAATCATTAACCTAAGAAAAGATACAATAGAAGAAAAGATAGATTTTCTTGTAAATAATTTGGAGTATCCTGTTTCATCACTAATAAGCTTCCCAAAATATCTTGCCTTTTCAACTAAATTGGTCGCTCTTAGGTTCTCAATGTATAATTGGCTCAAGGAACAAGGTACAGCCGATCCAATGTTGGCATTGAAAACTATTGTTTCATGTTCGGAATATGAATTTCTAAGACATCATGTGAATCGTCATCCCAGAGGCATGGAAGTTTGGGAGAACTTGAAGAGAGAGATATATTCAGATTCTATGGTGTCTCCGGCTCATTAGATCAAATTTTATTTTCACATACTCTTTATAGCAATCGATAGCCAATTGCTTCATAGCTGCTATTCTACAAGTTTTTCAATACTCATGGAATTCAGGGCTAATCTGCTGTGAAGTTTATGGAAAATTGTCTCATTTTCACAAAGTAAGTTAGCATGCTAAATTGTTTGTTGCTCACAACACCATCGGAACTTCCATTCCATCCGAATTCAGTTATTTCCTATTATGAACCTTTACCTTGTTAACCATTTACAGGTTTTGGTGGTCTTCTTGGGGGAGTGTAACACAACATTGTTTTGCACATTATTCAAGTTTCTTTTAACTTAATATTTACAAATCCTGGAAAGTTGGGCATTCTTTTATGGCAGAGGATGAAAGCCTAGGGAAAGAGATCATACTCAGAGAATACACCCGACACCTCTCCTAATTTCAGTGTTAAAGGAAGAAAGTCTAGGGAAAGAGAGAACGATAACTTCTCTTTCTTCTTGCCCAGATAGGGAATAACTATAGAAAGAGAGCATTATATCTCTCATTCTATCAATGATCAAGTCTGTGATGGCAATTATTTTTAGTATTTACGGTAGTTTTTCTATTTATGCATGGCGAGCATATTATTGATGTCTACGTTTCTAAATGTATGTCGATAAACACATTCTGTATATGTCGTAGTTTGTAACTATTTATTTAACAGACAGAATTTGAGCTTTCTGAATATGTTTACTTAGAGGAAGGATATGCCTAGAGATCGATCTGTCGCAATTGCAAGCCCTGTTTGTATTTATGTTGTGGCAATTCATGACATACTAGAAATCTAATATTTTTCCTTTTTGGGT

mRNA sequence

ATGTCGTACTTGCAAAACCTCAGAGCACTTTCCATGCTTTCTTCTTCCATTATTGCTGATAGCAAGTTTAACTTTGTTAGAGTCTTGTATTGGCGATTTGGGTTTCCCTCTGTTGCTTCAAACCCTAGATTTTATGGAAATAAAAAGGCTCCTCAAACGGAAGAACATAAAAATTCTGGAGGAATGTTGAATATGCGTAGTAGAAACGGTCGTCGGATTTCTCGGGCCACTATTAAGGAAGCTCAGGCTGCGATGTTGGAGTATTTACATTCTACTCGAGGGATTCAATTTTTCGATGCTGATATTATGAGTAAAAATTCCCCAATCTTTCTTAAAAAGCTTCTAGGAAGAGTTGAACATGAGGGTGATATTGGTCGGTCAATTATTCGATTTTTACGATATCATCCGATTAATGAGTTCGAGCCTTTCTTTGAGAGCGTGGGCTTGCAACCTGCAGAGTATAATGCGTTTCTTCCACGCAATTTGATGTTCTTGAGTGATGATGATTTATTGCTTGAGAACTTTCATGTGTTGTTTAACTATGGAGTTGAACGAAATAAGACAGGGAAGATATATAAGGAGGTAACTCAAATATTTCGGTATGAGTATGGTGTTTTGCTATCCAAGTTAAAAGCATATGAAAAACTTGGTCTCAGCCAAGCTAAAGTCGCTAATATTGTTGTTTGTAACCCCTATCTATTGATTGGTGGTGTTAATGATCGGTTTGTCAAGGTATTAGAAAAATTGGAGAACATTGGATTTGAATTAAGCTGGGTTGAAGAACAACTGACGGATGGTAATTCCTATAATTGGAAGCAAATTCTTGGGTTACTTTTCTGGTTTGAACAGATGGGTTGCGGTAAGGAGAAGTTGGCTGATTTAATCAGCCAACGTCCAGATCTTTTATTGGAGGATTCAGGAAGCAAATCACTTACCTTAATTGGGTTGTTACTGAAAATGGGATGCTCAATGGTCCAGATATGTTCCGTGTTCTTGCAATTTCCTCAAATCCGAGTTGGTGAGTTTGTATCAAATATGAGGCAATGCTTTTTGGTCTTCAATGAAATAAACATGGATGTGCAAGAGATAGGATACCTTTTCAGATCTCGTCCCTTGTTATTGGGATTGTATACTTTGAAAAGGGCTAAAAGCTTGCTTGGTAGCTTGAATGTTGGGAAGCAACGGCTCTGTCAATTTCTTTTAGAGAATCCAGAAGAATTGAAGAACTTGCGAATTGGAAAAAGAGTTCTACGATTACCAGACTCTGGAGAGGTTATGAGATCAAAGCAACAGAAAACTCAGTTCTTGTTGAAATTAGGACTGGAAGAAAACTCAACAGAGATGAAAGAAGCGTTAAAGGTGTTTCGAGGTAAAGTAGCGATACTCCAAGAGCGGTTTGATTGTATTGTGGAAGCTGGCATTGATAAGAAGGATGTTTACAAAATGATTAAAGTTTGTCCACGAATCATTAACCTAAGAAAAGATACAATAGAAGAAAAGATAGATTTTCTTGTAAATAATTTGGAGTATCCTGTTTCATCACTAATAAGCTTCCCAAAATATCTTGCCTTTTCAACTAAATTGGTCGCTCTTAGGTTCTCAATGTATAATTGGCTCAAGGAACAAGGTACAGCCGATCCAATGTTGGCATTGAAAACTATTGTTTCATGTTCGGAATATGAATTTCTAAGACATCATGTGAATCGTCATCCCAGAGGCATGGAAGTTTGGGAGAACTTGAAGAGAGAGATATATTCAGATTCTATGGTGTCTCCGGCTCATTAG

Coding sequence (CDS)

ATGTCGTACTTGCAAAACCTCAGAGCACTTTCCATGCTTTCTTCTTCCATTATTGCTGATAGCAAGTTTAACTTTGTTAGAGTCTTGTATTGGCGATTTGGGTTTCCCTCTGTTGCTTCAAACCCTAGATTTTATGGAAATAAAAAGGCTCCTCAAACGGAAGAACATAAAAATTCTGGAGGAATGTTGAATATGCGTAGTAGAAACGGTCGTCGGATTTCTCGGGCCACTATTAAGGAAGCTCAGGCTGCGATGTTGGAGTATTTACATTCTACTCGAGGGATTCAATTTTTCGATGCTGATATTATGAGTAAAAATTCCCCAATCTTTCTTAAAAAGCTTCTAGGAAGAGTTGAACATGAGGGTGATATTGGTCGGTCAATTATTCGATTTTTACGATATCATCCGATTAATGAGTTCGAGCCTTTCTTTGAGAGCGTGGGCTTGCAACCTGCAGAGTATAATGCGTTTCTTCCACGCAATTTGATGTTCTTGAGTGATGATGATTTATTGCTTGAGAACTTTCATGTGTTGTTTAACTATGGAGTTGAACGAAATAAGACAGGGAAGATATATAAGGAGGTAACTCAAATATTTCGGTATGAGTATGGTGTTTTGCTATCCAAGTTAAAAGCATATGAAAAACTTGGTCTCAGCCAAGCTAAAGTCGCTAATATTGTTGTTTGTAACCCCTATCTATTGATTGGTGGTGTTAATGATCGGTTTGTCAAGGTATTAGAAAAATTGGAGAACATTGGATTTGAATTAAGCTGGGTTGAAGAACAACTGACGGATGGTAATTCCTATAATTGGAAGCAAATTCTTGGGTTACTTTTCTGGTTTGAACAGATGGGTTGCGGTAAGGAGAAGTTGGCTGATTTAATCAGCCAACGTCCAGATCTTTTATTGGAGGATTCAGGAAGCAAATCACTTACCTTAATTGGGTTGTTACTGAAAATGGGATGCTCAATGGTCCAGATATGTTCCGTGTTCTTGCAATTTCCTCAAATCCGAGTTGGTGAGTTTGTATCAAATATGAGGCAATGCTTTTTGGTCTTCAATGAAATAAACATGGATGTGCAAGAGATAGGATACCTTTTCAGATCTCGTCCCTTGTTATTGGGATTGTATACTTTGAAAAGGGCTAAAAGCTTGCTTGGTAGCTTGAATGTTGGGAAGCAACGGCTCTGTCAATTTCTTTTAGAGAATCCAGAAGAATTGAAGAACTTGCGAATTGGAAAAAGAGTTCTACGATTACCAGACTCTGGAGAGGTTATGAGATCAAAGCAACAGAAAACTCAGTTCTTGTTGAAATTAGGACTGGAAGAAAACTCAACAGAGATGAAAGAAGCGTTAAAGGTGTTTCGAGGTAAAGTAGCGATACTCCAAGAGCGGTTTGATTGTATTGTGGAAGCTGGCATTGATAAGAAGGATGTTTACAAAATGATTAAAGTTTGTCCACGAATCATTAACCTAAGAAAAGATACAATAGAAGAAAAGATAGATTTTCTTGTAAATAATTTGGAGTATCCTGTTTCATCACTAATAAGCTTCCCAAAATATCTTGCCTTTTCAACTAAATTGGTCGCTCTTAGGTTCTCAATGTATAATTGGCTCAAGGAACAAGGTACAGCCGATCCAATGTTGGCATTGAAAACTATTGTTTCATGTTCGGAATATGAATTTCTAAGACATCATGTGAATCGTCATCCCAGAGGCATGGAAGTTTGGGAGAACTTGAAGAGAGAGATATATTCAGATTCTATGGTGTCTCCGGCTCATTAG

Protein sequence

MSYLQNLRALSMLSSSIIADSKFNFVRVLYWRFGFPSVASNPRFYGNKKAPQTEEHKNSGGMLNMRSRNGRRISRATIKEAQAAMLEYLHSTRGIQFFDADIMSKNSPIFLKKLLGRVEHEGDIGRSIIRFLRYHPINEFEPFFESVGLQPAEYNAFLPRNLMFLSDDDLLLENFHVLFNYGVERNKTGKIYKEVTQIFRYEYGVLLSKLKAYEKLGLSQAKVANIVVCNPYLLIGGVNDRFVKVLEKLENIGFELSWVEEQLTDGNSYNWKQILGLLFWFEQMGCGKEKLADLISQRPDLLLEDSGSKSLTLIGLLLKMGCSMVQICSVFLQFPQIRVGEFVSNMRQCFLVFNEINMDVQEIGYLFRSRPLLLGLYTLKRAKSLLGSLNVGKQRLCQFLLENPEELKNLRIGKRVLRLPDSGEVMRSKQQKTQFLLKLGLEENSTEMKEALKVFRGKVAILQERFDCIVEAGIDKKDVYKMIKVCPRIINLRKDTIEEKIDFLVNNLEYPVSSLISFPKYLAFSTKLVALRFSMYNWLKEQGTADPMLALKTIVSCSEYEFLRHHVNRHPRGMEVWENLKREIYSDSMVSPAH*

Homology

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BLAST of CsaV3_4G030480 vs. NCBI nr
Match: XP_004146406.1 (transcription termination factor MTEF18, mitochondrial isoform X1 [Cucumis sativus] >KGN54807.1 hypothetical protein Csa_012116 [Cucumis sativus])

HSP 1 Score: 1181.4 bits (3055), Expect = 0.0e+00
Identity = 594/594 (100.00%), Postives = 594/594 (100.00%), Query Frame = 0


Query: 1   MSYLQNLRALSMLSSSIIADSKFNFVRVLYWRFGFPSVASNPRFYGNKKAPQTEEHKNSG 60
           MSYLQNLRALSMLSSSIIADSKFNFVRVLYWRFGFPSVASNPRFYGNKKAPQTEEHKNSG
Sbjct: 1   MSYLQNLRALSMLSSSIIADSKFNFVRVLYWRFGFPSVASNPRFYGNKKAPQTEEHKNSG 60

Query: 61  GMLNMRSRNGRRISRATIKEAQAAMLEYLHSTRGIQFFDADIMSKNSPIFLKKLLGRVEH 120
           GMLNMRSRNGRRISRATIKEAQAAMLEYLHSTRGIQFFDADIMSKNSPIFLKKLLGRVEH
Sbjct: 61  GMLNMRSRNGRRISRATIKEAQAAMLEYLHSTRGIQFFDADIMSKNSPIFLKKLLGRVEH 120

Query: 121 EGDIGRSIIRFLRYHPINEFEPFFESVGLQPAEYNAFLPRNLMFLSDDDLLLENFHVLFN 180
           EGDIGRSIIRFLRYHPINEFEPFFESVGLQPAEYNAFLPRNLMFLSDDDLLLENFHVLFN
Sbjct: 121 EGDIGRSIIRFLRYHPINEFEPFFESVGLQPAEYNAFLPRNLMFLSDDDLLLENFHVLFN 180

Query: 181 YGVERNKTGKIYKEVTQIFRYEYGVLLSKLKAYEKLGLSQAKVANIVVCNPYLLIGGVND 240
           YGVERNKTGKIYKEVTQIFRYEYGVLLSKLKAYEKLGLSQAKVANIVVCNPYLLIGGVND
Sbjct: 181 YGVERNKTGKIYKEVTQIFRYEYGVLLSKLKAYEKLGLSQAKVANIVVCNPYLLIGGVND 240

Query: 241 RFVKVLEKLENIGFELSWVEEQLTDGNSYNWKQILGLLFWFEQMGCGKEKLADLISQRPD 300
           RFVKVLEKLENIGFELSWVEEQLTDGNSYNWKQILGLLFWFEQMGCGKEKLADLISQRPD
Sbjct: 241 RFVKVLEKLENIGFELSWVEEQLTDGNSYNWKQILGLLFWFEQMGCGKEKLADLISQRPD 300

Query: 301 LLLEDSGSKSLTLIGLLLKMGCSMVQICSVFLQFPQIRVGEFVSNMRQCFLVFNEINMDV 360
           LLLEDSGSKSLTLIGLLLKMGCSMVQICSVFLQFPQIRVGEFVSNMRQCFLVFNEINMDV
Sbjct: 301 LLLEDSGSKSLTLIGLLLKMGCSMVQICSVFLQFPQIRVGEFVSNMRQCFLVFNEINMDV 360

Query: 361 QEIGYLFRSRPLLLGLYTLKRAKSLLGSLNVGKQRLCQFLLENPEELKNLRIGKRVLRLP 420
           QEIGYLFRSRPLLLGLYTLKRAKSLLGSLNVGKQRLCQFLLENPEELKNLRIGKRVLRLP
Sbjct: 361 QEIGYLFRSRPLLLGLYTLKRAKSLLGSLNVGKQRLCQFLLENPEELKNLRIGKRVLRLP 420

Query: 421 DSGEVMRSKQQKTQFLLKLGLEENSTEMKEALKVFRGKVAILQERFDCIVEAGIDKKDVY 480
           DSGEVMRSKQQKTQFLLKLGLEENSTEMKEALKVFRGKVAILQERFDCIVEAGIDKKDVY
Sbjct: 421 DSGEVMRSKQQKTQFLLKLGLEENSTEMKEALKVFRGKVAILQERFDCIVEAGIDKKDVY 480

Query: 481 KMIKVCPRIINLRKDTIEEKIDFLVNNLEYPVSSLISFPKYLAFSTKLVALRFSMYNWLK 540
           KMIKVCPRIINLRKDTIEEKIDFLVNNLEYPVSSLISFPKYLAFSTKLVALRFSMYNWLK
Sbjct: 481 KMIKVCPRIINLRKDTIEEKIDFLVNNLEYPVSSLISFPKYLAFSTKLVALRFSMYNWLK 540

Query: 541 EQGTADPMLALKTIVSCSEYEFLRHHVNRHPRGMEVWENLKREIYSDSMVSPAH 595
           EQGTADPMLALKTIVSCSEYEFLRHHVNRHPRGMEVWENLKREIYSDSMVSPAH
Sbjct: 541 EQGTADPMLALKTIVSCSEYEFLRHHVNRHPRGMEVWENLKREIYSDSMVSPAH 594

[Close]

BLAST of CsaV3_4G030480 vs. NCBI nr
Match: XP_031740462.1 (transcription termination factor MTEF18, mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 1061.2 bits (2743), Expect = 3.2e-306
Identity = 533/533 (100.00%), Postives = 533/533 (100.00%), Query Frame = 0


Query: 62  MLNMRSRNGRRISRATIKEAQAAMLEYLHSTRGIQFFDADIMSKNSPIFLKKLLGRVEHE 121
           MLNMRSRNGRRISRATIKEAQAAMLEYLHSTRGIQFFDADIMSKNSPIFLKKLLGRVEHE
Sbjct: 1   MLNMRSRNGRRISRATIKEAQAAMLEYLHSTRGIQFFDADIMSKNSPIFLKKLLGRVEHE 60

Query: 122 GDIGRSIIRFLRYHPINEFEPFFESVGLQPAEYNAFLPRNLMFLSDDDLLLENFHVLFNY 181
           GDIGRSIIRFLRYHPINEFEPFFESVGLQPAEYNAFLPRNLMFLSDDDLLLENFHVLFNY
Sbjct: 61  GDIGRSIIRFLRYHPINEFEPFFESVGLQPAEYNAFLPRNLMFLSDDDLLLENFHVLFNY 120

Query: 182 GVERNKTGKIYKEVTQIFRYEYGVLLSKLKAYEKLGLSQAKVANIVVCNPYLLIGGVNDR 241
           GVERNKTGKIYKEVTQIFRYEYGVLLSKLKAYEKLGLSQAKVANIVVCNPYLLIGGVNDR
Sbjct: 121 GVERNKTGKIYKEVTQIFRYEYGVLLSKLKAYEKLGLSQAKVANIVVCNPYLLIGGVNDR 180

Query: 242 FVKVLEKLENIGFELSWVEEQLTDGNSYNWKQILGLLFWFEQMGCGKEKLADLISQRPDL 301
           FVKVLEKLENIGFELSWVEEQLTDGNSYNWKQILGLLFWFEQMGCGKEKLADLISQRPDL
Sbjct: 181 FVKVLEKLENIGFELSWVEEQLTDGNSYNWKQILGLLFWFEQMGCGKEKLADLISQRPDL 240

Query: 302 LLEDSGSKSLTLIGLLLKMGCSMVQICSVFLQFPQIRVGEFVSNMRQCFLVFNEINMDVQ 361
           LLEDSGSKSLTLIGLLLKMGCSMVQICSVFLQFPQIRVGEFVSNMRQCFLVFNEINMDVQ
Sbjct: 241 LLEDSGSKSLTLIGLLLKMGCSMVQICSVFLQFPQIRVGEFVSNMRQCFLVFNEINMDVQ 300

Query: 362 EIGYLFRSRPLLLGLYTLKRAKSLLGSLNVGKQRLCQFLLENPEELKNLRIGKRVLRLPD 421
           EIGYLFRSRPLLLGLYTLKRAKSLLGSLNVGKQRLCQFLLENPEELKNLRIGKRVLRLPD
Sbjct: 301 EIGYLFRSRPLLLGLYTLKRAKSLLGSLNVGKQRLCQFLLENPEELKNLRIGKRVLRLPD 360

Query: 422 SGEVMRSKQQKTQFLLKLGLEENSTEMKEALKVFRGKVAILQERFDCIVEAGIDKKDVYK 481
           SGEVMRSKQQKTQFLLKLGLEENSTEMKEALKVFRGKVAILQERFDCIVEAGIDKKDVYK
Sbjct: 361 SGEVMRSKQQKTQFLLKLGLEENSTEMKEALKVFRGKVAILQERFDCIVEAGIDKKDVYK 420

Query: 482 MIKVCPRIINLRKDTIEEKIDFLVNNLEYPVSSLISFPKYLAFSTKLVALRFSMYNWLKE 541
           MIKVCPRIINLRKDTIEEKIDFLVNNLEYPVSSLISFPKYLAFSTKLVALRFSMYNWLKE
Sbjct: 421 MIKVCPRIINLRKDTIEEKIDFLVNNLEYPVSSLISFPKYLAFSTKLVALRFSMYNWLKE 480

Query: 542 QGTADPMLALKTIVSCSEYEFLRHHVNRHPRGMEVWENLKREIYSDSMVSPAH 595
           QGTADPMLALKTIVSCSEYEFLRHHVNRHPRGMEVWENLKREIYSDSMVSPAH
Sbjct: 481 QGTADPMLALKTIVSCSEYEFLRHHVNRHPRGMEVWENLKREIYSDSMVSPAH 533

[Close]

BLAST of CsaV3_4G030480 vs. NCBI nr
Match: KAA0034914.1 (transcription termination factor MTEF18 [Cucumis melo var. makuwa])

HSP 1 Score: 1003.0 bits (2592), Expect = 1.0e-288
Identity = 501/585 (85.64%), Postives = 531/585 (90.77%), Query Frame = 0


Query: 12  MLSSSIIADSKFNFVRVLYWRFGFPSVASNPRFYGNKKAPQTEEHKNSGGMLNMRSRNGR 71
           MLSSSIIADSKFNFVRVLYW  GFPSVASNPRFYGNKKAPQTEE++NSGGMLNM SRNG 
Sbjct: 1   MLSSSIIADSKFNFVRVLYWGIGFPSVASNPRFYGNKKAPQTEEYENSGGMLNMGSRNGH 60

Query: 72  RISRATIKEAQAAMLEYLHSTRGIQFFDADIMSKNSPIFLKKLLGRVEHEGDIGRSIIRF 131
           R+SRATIKEAQAA+ EYLHSTRGI+F DA+ MSKNSPIFLKKLLGRVEH+GDIGRS++RF
Sbjct: 61  RVSRATIKEAQAALFEYLHSTRGIEFLDAENMSKNSPIFLKKLLGRVEHKGDIGRSVMRF 120

Query: 132 LRYHPINEFEPFFESVGLQPAEYNAFLPRNLMFLSDDDLLLENFHVLFNYGVERNKTGKI 191
           LRY+PINEFEPFFESVGLQPAEYNAFLPRNLMFLSDDDLLLENFHVL NYG+ERNKTGKI
Sbjct: 121 LRYNPINEFEPFFESVGLQPAEYNAFLPRNLMFLSDDDLLLENFHVLCNYGIERNKTGKI 180

Query: 192 YKEVTQIFRYEYGVLLSKLKAYEKLGLSQAKVANIVVCNPYLLIGGVNDRFVKVLEKLEN 251
           YKE TQIFRY+YGVL SKL+AYEKLGLSQ  V   VVC+PYLLIGGVNDRFVKVLEKL+N
Sbjct: 181 YKEATQIFRYDYGVLFSKLRAYEKLGLSQDTVVKYVVCSPYLLIGGVNDRFVKVLEKLKN 240

Query: 252 IGFELSWVEEQLTDGNSYNWKQILGLLFWFEQMGCGKEKLADLISQRPDLLLEDSGSKSL 311
           IGFE SWVEEQLTDGNSYNWKQILG  FWFEQMGCGKEKLADLISQ PDLL EDSGSKSL
Sbjct: 241 IGFESSWVEEQLTDGNSYNWKQILGSFFWFEQMGCGKEKLADLISQHPDLLFEDSGSKSL 300

Query: 312 TLIGLLLKMGCSMVQICSVFLQFPQIRVGEFVSNMRQCFLVFNEINMDVQEIGYLFRSRP 371
           +LIGLLLKMGCS +QICSVFLQFPQIRVG+FVSNMRQCFLVFNEINM VQEIGYLFRS P
Sbjct: 301 SLIGLLLKMGCSKIQICSVFLQFPQIRVGKFVSNMRQCFLVFNEINMGVQEIGYLFRSHP 360

Query: 372 LLLGLYTLKRAKSLLGSLNVGKQRLCQFLLENPEELKNLRIGKRVLRLPDSGE--VMRSK 431
           LLLGLYTLK  KSL   L  G +R+CQF+LENPEELKN + G R+L LPDS +  VM SK
Sbjct: 361 LLLGLYTLKSTKSLYKFLKAGNKRICQFILENPEELKNWKHGTRILPLPDSEDRSVMGSK 420

Query: 432 QQKTQFLLKLGLEENSTEMKEALKVFRGKVAILQERFDCIVEAGIDKKDVYKMIKVCPRI 491
           QQK QFLLKLGLE NS +MKEALKVF GK   LQERFDCIVEAGID+KDVYKMIKV PRI
Sbjct: 421 QQKPQFLLKLGLEGNSAKMKEALKVFGGKAMDLQERFDCIVEAGIDEKDVYKMIKVYPRI 480

Query: 492 INLRKDTIEEKIDFLVNNLEYPVSSLISFPKYLAFSTKLVALRFSMYNWLKEQGTADPML 551
           INL KD+IEEKIDF VNNL YPVSSLISFPKYL +STKLV LRFSMYNWLKEQGTA+PM 
Sbjct: 481 INLSKDSIEEKIDFFVNNLGYPVSSLISFPKYLGYSTKLVILRFSMYNWLKEQGTANPMS 540

Query: 552 ALKTIVSCSEYEFLRHHVNRHPRGMEVWENLKREIYSDSMVSPAH 595
           ALKTI+SCSEYEFLRHHVNRHPRGMEVWENLKREIYSDSM SPAH
Sbjct: 541 ALKTIISCSEYEFLRHHVNRHPRGMEVWENLKREIYSDSMPSPAH 585

[Close]

BLAST of CsaV3_4G030480 vs. NCBI nr
Match: TYK05456.1 (transcription termination factor MTEF18 [Cucumis melo var. makuwa])

HSP 1 Score: 1003.0 bits (2592), Expect = 1.0e-288
Identity = 501/585 (85.64%), Postives = 531/585 (90.77%), Query Frame = 0


Query: 12  MLSSSIIADSKFNFVRVLYWRFGFPSVASNPRFYGNKKAPQTEEHKNSGGMLNMRSRNGR 71
           MLSSSIIADSKFNFVRVLYW  GFPSVASNPRFYGNKKAPQTEE++NSGGMLNM SRNG 
Sbjct: 1   MLSSSIIADSKFNFVRVLYWGIGFPSVASNPRFYGNKKAPQTEEYENSGGMLNMGSRNGH 60

Query: 72  RISRATIKEAQAAMLEYLHSTRGIQFFDADIMSKNSPIFLKKLLGRVEHEGDIGRSIIRF 131
           R+SRATIKEAQAA+ EYLHSTRGI+F DA+ MSKNSPIFLKKLLGRVEH+GDIGRS++RF
Sbjct: 61  RVSRATIKEAQAALFEYLHSTRGIEFLDAENMSKNSPIFLKKLLGRVEHKGDIGRSVMRF 120

Query: 132 LRYHPINEFEPFFESVGLQPAEYNAFLPRNLMFLSDDDLLLENFHVLFNYGVERNKTGKI 191
           LRY+PINEFEPFFESVGLQPAEYNAFLPRNLMFLSDDDLLLENFHVL NYG+ERNKTGKI
Sbjct: 121 LRYNPINEFEPFFESVGLQPAEYNAFLPRNLMFLSDDDLLLENFHVLCNYGIERNKTGKI 180

Query: 192 YKEVTQIFRYEYGVLLSKLKAYEKLGLSQAKVANIVVCNPYLLIGGVNDRFVKVLEKLEN 251
           YKE TQIFRY+YGVL SKL+AYEKLGLSQ  V   VVC+PYLLIGGVNDRFVKVLEKL+N
Sbjct: 181 YKEATQIFRYDYGVLFSKLRAYEKLGLSQDTVVKYVVCSPYLLIGGVNDRFVKVLEKLKN 240

Query: 252 IGFELSWVEEQLTDGNSYNWKQILGLLFWFEQMGCGKEKLADLISQRPDLLLEDSGSKSL 311
           IGFE SWVEEQLTDGNSYNWKQILG  FWFEQMGCGKEKLADLISQ PDLL EDSGSKSL
Sbjct: 241 IGFESSWVEEQLTDGNSYNWKQILGSFFWFEQMGCGKEKLADLISQHPDLLFEDSGSKSL 300

Query: 312 TLIGLLLKMGCSMVQICSVFLQFPQIRVGEFVSNMRQCFLVFNEINMDVQEIGYLFRSRP 371
           +LIGLLLKMGCS +QICSVFLQFPQIRVG+FVSNMRQCFLVFNEINM VQEIGYLFRS P
Sbjct: 301 SLIGLLLKMGCSKIQICSVFLQFPQIRVGKFVSNMRQCFLVFNEINMGVQEIGYLFRSHP 360

Query: 372 LLLGLYTLKRAKSLLGSLNVGKQRLCQFLLENPEELKNLRIGKRVLRLPDSGE--VMRSK 431
           LLLGLYTLK  KSL   L  G +R+CQF+LENPEELKN + G R+L LPDS +  VM SK
Sbjct: 361 LLLGLYTLKSTKSLYKFLKAGNKRICQFILENPEELKNWKHGTRILPLPDSEDRSVMGSK 420

Query: 432 QQKTQFLLKLGLEENSTEMKEALKVFRGKVAILQERFDCIVEAGIDKKDVYKMIKVCPRI 491
           Q K QFLLKLGLEENS +MKEALKVF GK   LQERFDCIVEAGID+KDVYKMIKV PRI
Sbjct: 421 QLKPQFLLKLGLEENSAKMKEALKVFGGKAMDLQERFDCIVEAGIDEKDVYKMIKVYPRI 480

Query: 492 INLRKDTIEEKIDFLVNNLEYPVSSLISFPKYLAFSTKLVALRFSMYNWLKEQGTADPML 551
           INL KD+IEEKIDF VNNL YPVSSLISFPKYL +STKLV LRFSMYNWLKEQGTA+PM 
Sbjct: 481 INLSKDSIEEKIDFFVNNLGYPVSSLISFPKYLGYSTKLVILRFSMYNWLKEQGTANPMS 540

Query: 552 ALKTIVSCSEYEFLRHHVNRHPRGMEVWENLKREIYSDSMVSPAH 595
           ALKTI+SCSEYEFLRHHVNRHPRGMEVWENLKREIYSDSM SPAH
Sbjct: 541 ALKTIISCSEYEFLRHHVNRHPRGMEVWENLKREIYSDSMPSPAH 585

[Close]

BLAST of CsaV3_4G030480 vs. NCBI nr
Match: KAA0034913.1 (transcription termination factor MTEF18 [Cucumis melo var. makuwa])

HSP 1 Score: 936.0 bits (2418), Expect = 1.6e-268
Identity = 469/583 (80.45%), Postives = 515/583 (88.34%), Query Frame = 0


Query: 12  MLSSSIIADSKFNFVRVLYWRFGFPSVASNPRFYGNKKAPQTEEHKNSGGMLNMRSRNGR 71
           MLSSSIIADSKFNFVRVLYW   F SVASN RFYG KKAPQTEE++NSGGMLN+ SRNG 
Sbjct: 1   MLSSSIIADSKFNFVRVLYWGIRFSSVASNHRFYGTKKAPQTEEYENSGGMLNVHSRNGH 60

Query: 72  RISRATIKEAQAAMLEYLHSTRGIQFFDADIMSKNSPIFLKKLLGRVEHEGDIGRSIIRF 131
           RI R TI +AQAA+LEYLHSTRGI F DA+ MSK+SPIFLKKLL +VEHEGDIGRSI+RF
Sbjct: 61  RIYRPTIMKAQAALLEYLHSTRGIGFLDAENMSKSSPIFLKKLLAKVEHEGDIGRSIMRF 120

Query: 132 LRYHPINEFEPFFESVGLQPAEYNAFLPRNLMFLSDDDLLLENFHVLFNYGVERNKTGKI 191
           LRY+PINEFEPFFESVGLQPAEY+AFLPRNLMFLSDDDLLLENFHVL NYG+ERNKTGKI
Sbjct: 121 LRYNPINEFEPFFESVGLQPAEYSAFLPRNLMFLSDDDLLLENFHVLCNYGIERNKTGKI 180

Query: 192 YKEVTQIFRYEYGVLLSKLKAYEKLGLSQAKVANIVVCNPYLLIGGVNDRFVKVLEKLEN 251
           YKE TQIFRY+YGVLLSKLKAYEKLGLSQA V   VV NPYLLIGGVND+FVKVLEKL+N
Sbjct: 181 YKEATQIFRYDYGVLLSKLKAYEKLGLSQATVVRFVVSNPYLLIGGVNDQFVKVLEKLKN 240

Query: 252 IGFELSWVEEQLTDGNSYNWKQILGLLFWFEQMGCGKEKLADLISQRPDLLLEDSGSKSL 311
           IGFE SWVEEQLT+G SYNWKQILGLLFWFEQMGC KEKLADLISQ PDLL EDSGS+SL
Sbjct: 241 IGFESSWVEEQLTNGISYNWKQILGLLFWFEQMGCSKEKLADLISQHPDLLFEDSGSRSL 300

Query: 312 TLIGLLLKMGCSMVQICSVFLQFPQIRVGEFVSNMRQCFLVFNEINMDVQEIGYLFRSRP 371
           +LIGLLLKMGCS +QICS+FLQFPQIRVG+FVSNMRQCFLVFNEINM VQEI YLFRS P
Sbjct: 301 SLIGLLLKMGCSTIQICSMFLQFPQIRVGKFVSNMRQCFLVFNEINMGVQEIEYLFRSHP 360

Query: 372 LLLGLYTLKRAKSLLGSLNVGKQRLCQFLLENPEELKNLRIGKRVLRLPDSGEVMRSKQQ 431
            +LG YTLK  KSL  +LNVGK+RLCQ++LENPEELKNL++G  VL LP SG++MRSKQQ
Sbjct: 361 HILGSYTLKTTKSLFSTLNVGKKRLCQYILENPEELKNLKVGTTVLPLPGSGDIMRSKQQ 420

Query: 432 KTQFLLKLGLEENSTEMKEALKVFRGKVAILQERFDCIVEAGIDKKDVYKMIKVCPRIIN 491
           KTQFLL LGLEENS +MK   K+ RGK A LQERFDCIVEAGID+KDV+KMI+  P+I+N
Sbjct: 421 KTQFLLNLGLEENSKKMK---KLLRGKGAELQERFDCIVEAGIDEKDVHKMIQDAPKILN 480

Query: 492 LRKDTIEEKIDFLVNNLEYPVSSLISFPKYLAFSTKLVALRFSMYNWLKEQGTADPMLAL 551
             KD IEEKIDFLVNNL YPVSS+ISFP YL+++TK V LRF MYNWLKEQGT   +L +
Sbjct: 481 QTKDIIEEKIDFLVNNLGYPVSSIISFPSYLSYTTKRVTLRFLMYNWLKEQGTIKRILQM 540

Query: 552 KTIVSCSEYEFLRHHVNRHPRGMEVWENLKREIYSDSMVSPAH 595
            TIVSC+E EFL+ +VN HPRGMEVWENLKREIYSDSM SPAH
Sbjct: 541 STIVSCTENEFLKRYVNHHPRGMEVWENLKREIYSDSMASPAH 580

[Close]

BLAST of CsaV3_4G030480 vs. ExPASy Swiss-Prot
Match: Q9M219 (Transcription termination factor MTEF18, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF18 PE=1 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 4.1e-46
Identity = 134/515 (26.02%), Postives = 237/515 (46.02%), Query Frame = 0


Query: 78  IKEAQAAMLEYLHSTRGIQFFDADIMSKNSPIFLKKLLGRVEHE-GDIGRSIIRFLRYHP 137
           I +AQ A+ +YLH+TR + +  A+ ++ N+ + ++ L+ +++       +S+ + L YHP
Sbjct: 34  IGKAQQAITDYLHTTRSLSYTHAEQIASNASVSIRNLILKLDFSVPTFSKSLRKHLSYHP 93

Query: 138 INEFEPFFESVGLQPAEYNAFLPRNLMFLSDDDLLLENFHVLFNYGVERNKTGKIYKEVT 197
           INEFE FFES+G+  +E + FLP    F S+D  +L+    L  +G   NK GK+YKE  
Sbjct: 94  INEFEFFFESIGIDYSEVSEFLPEKKFFFSEDRTVLDAAFALSGFGFPWNKLGKLYKEER 153

Query: 198 QIFRYEYGVLLSKLKAYEKLGLSQAKVANIVVCNPYLLIGG--VNDRFVKVLEKLENIGF 257
            +F    G + S+L  ++ +G S   V    +  P  L GG  +      +  KL+ +  
Sbjct: 154 LVFVQRPGEIESRLLKFKDIGFSTVAVIGTCLAIPRTLCGGGELGSEIRCLFVKLKRLFD 213

Query: 258 ELSWVEEQLTDGNSYNWKQILGLLFWFEQMGCGKEKLADLISQRPDLLLEDSGSKSLTLI 317
           E       L + N  +W  +   +  F  +GC  E++ +L+ +   L LE S    +   
Sbjct: 214 EFD--SHHLFEENVDSWLAVSRKIRIFYDLGCENEEMWELMCRNKSLFLEYSEEALMNKA 273

Query: 318 GLLLKMGCSMVQICSVFLQFPQIRVGEFVSNMRQCFLVFNEINMDVQEIGYLFRSRPLLL 377
           G   + G S      + L+ P I   +    +     +     +   E+  + +  P + 
Sbjct: 274 GYFCRFGVSKEDAALLILRNPAIMNFDLEKPVISVTGMLKHFGLRQDEVDAVAQKYPYVF 333

Query: 378 GLYTLKRAKSLLGSL-----------NVGKQRLCQFLLENPEELKNLRIGKRVLRLPDSG 437
           G   LK    +L ++           N     L  + L +P+E       + +  L +S 
Sbjct: 334 GRNQLKNLPYVLRAIDLHERIFDILKNGNHHLLASYTLMDPDEDLEREYQEGLEELQNS- 393

Query: 438 EVMRSKQQKTQFLLKLGLEENSTEMKEALKVFRGKVAILQERFDCIVEAGIDKKDVYKMI 497
              R   QK  FL ++G  EN   MK  L+   G    L +RF  ++ +GI    +  +I
Sbjct: 394 RTKRHNIQKLDFLHEIGFGENGITMK-VLQHVHGTAVELHDRFQILLNSGIIFSKICMLI 453

Query: 498 KVCPRIINLRKDTIEEKIDFLVNNLEYPVSSLISFPKYLAFSTK-LVALRFSMYNWLKEQ 557
           +  P+I+N +  +I++K+ FL   +   +  L  FP YL F  +  ++ RF  + WL E+
Sbjct: 454 RSAPKILNQKPHSIQDKLRFLCGEMGDSLDYLEVFPAYLCFDLENRISPRFRFHKWLVEK 513

Query: 558 GTADPMLALKTIVSCSEYEFLRHHVNRHPRGMEVW 578
           G ++   ++ +IV+ SE  F+      HP   + W
Sbjct: 514 GFSEKSYSIASIVATSEKAFIARLYGIHPAIPKHW 544

[Close]

BLAST of CsaV3_4G030480 vs. ExPASy Swiss-Prot
Match: Q9C6A1 (Transcription termination factor MTERF15, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF15 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 7.6e-08
Identity = 32/121 (26.45%), Postives = 65/121 (53.72%), Query Frame = 0


Query: 465 RFDCIVEAGIDKKDVYKMIKVCPRIINLRKDTIEEKIDFLVNNLEYPVSSLISFPKYLAF 524
           R DC+ + G+ ++D +K++   PR+I    + IE+KI+FL N + + ++ L   P+YL  
Sbjct: 288 RVDCLCKYGLIRRDAFKVVWKEPRVILYEIEDIEKKIEFLTNRMGFHINCLADVPEYLGV 347

Query: 525 S-TKLVALRFSMYNWLKEQGTADPMLALKTIVSCSEYEFLRHHVNRHPRGMEVWENLKRE 584
           +  K +  R+++ ++LK +G     + LK ++  S   F   +V  +P    ++   K  
Sbjct: 348 NLQKQIVPRYNVIDYLKLKGGLGCDIGLKGLIKPSMKRFYNLYVMPYPECERIFGKRKEN 407

[Close]

BLAST of CsaV3_4G030480 vs. ExPASy TrEMBL
Match: A0A0A0L2G9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G507370 PE=3 SV=1)

HSP 1 Score: 1181.4 bits (3055), Expect = 0.0e+00
Identity = 594/594 (100.00%), Postives = 594/594 (100.00%), Query Frame = 0


Query: 1   MSYLQNLRALSMLSSSIIADSKFNFVRVLYWRFGFPSVASNPRFYGNKKAPQTEEHKNSG 60
           MSYLQNLRALSMLSSSIIADSKFNFVRVLYWRFGFPSVASNPRFYGNKKAPQTEEHKNSG
Sbjct: 1   MSYLQNLRALSMLSSSIIADSKFNFVRVLYWRFGFPSVASNPRFYGNKKAPQTEEHKNSG 60

Query: 61  GMLNMRSRNGRRISRATIKEAQAAMLEYLHSTRGIQFFDADIMSKNSPIFLKKLLGRVEH 120
           GMLNMRSRNGRRISRATIKEAQAAMLEYLHSTRGIQFFDADIMSKNSPIFLKKLLGRVEH
Sbjct: 61  GMLNMRSRNGRRISRATIKEAQAAMLEYLHSTRGIQFFDADIMSKNSPIFLKKLLGRVEH 120

Query: 121 EGDIGRSIIRFLRYHPINEFEPFFESVGLQPAEYNAFLPRNLMFLSDDDLLLENFHVLFN 180
           EGDIGRSIIRFLRYHPINEFEPFFESVGLQPAEYNAFLPRNLMFLSDDDLLLENFHVLFN
Sbjct: 121 EGDIGRSIIRFLRYHPINEFEPFFESVGLQPAEYNAFLPRNLMFLSDDDLLLENFHVLFN 180

Query: 181 YGVERNKTGKIYKEVTQIFRYEYGVLLSKLKAYEKLGLSQAKVANIVVCNPYLLIGGVND 240
           YGVERNKTGKIYKEVTQIFRYEYGVLLSKLKAYEKLGLSQAKVANIVVCNPYLLIGGVND
Sbjct: 181 YGVERNKTGKIYKEVTQIFRYEYGVLLSKLKAYEKLGLSQAKVANIVVCNPYLLIGGVND 240

Query: 241 RFVKVLEKLENIGFELSWVEEQLTDGNSYNWKQILGLLFWFEQMGCGKEKLADLISQRPD 300
           RFVKVLEKLENIGFELSWVEEQLTDGNSYNWKQILGLLFWFEQMGCGKEKLADLISQRPD
Sbjct: 241 RFVKVLEKLENIGFELSWVEEQLTDGNSYNWKQILGLLFWFEQMGCGKEKLADLISQRPD 300

Query: 301 LLLEDSGSKSLTLIGLLLKMGCSMVQICSVFLQFPQIRVGEFVSNMRQCFLVFNEINMDV 360
           LLLEDSGSKSLTLIGLLLKMGCSMVQICSVFLQFPQIRVGEFVSNMRQCFLVFNEINMDV
Sbjct: 301 LLLEDSGSKSLTLIGLLLKMGCSMVQICSVFLQFPQIRVGEFVSNMRQCFLVFNEINMDV 360

Query: 361 QEIGYLFRSRPLLLGLYTLKRAKSLLGSLNVGKQRLCQFLLENPEELKNLRIGKRVLRLP 420
           QEIGYLFRSRPLLLGLYTLKRAKSLLGSLNVGKQRLCQFLLENPEELKNLRIGKRVLRLP
Sbjct: 361 QEIGYLFRSRPLLLGLYTLKRAKSLLGSLNVGKQRLCQFLLENPEELKNLRIGKRVLRLP 420

Query: 421 DSGEVMRSKQQKTQFLLKLGLEENSTEMKEALKVFRGKVAILQERFDCIVEAGIDKKDVY 480
           DSGEVMRSKQQKTQFLLKLGLEENSTEMKEALKVFRGKVAILQERFDCIVEAGIDKKDVY
Sbjct: 421 DSGEVMRSKQQKTQFLLKLGLEENSTEMKEALKVFRGKVAILQERFDCIVEAGIDKKDVY 480

Query: 481 KMIKVCPRIINLRKDTIEEKIDFLVNNLEYPVSSLISFPKYLAFSTKLVALRFSMYNWLK 540
           KMIKVCPRIINLRKDTIEEKIDFLVNNLEYPVSSLISFPKYLAFSTKLVALRFSMYNWLK
Sbjct: 481 KMIKVCPRIINLRKDTIEEKIDFLVNNLEYPVSSLISFPKYLAFSTKLVALRFSMYNWLK 540

Query: 541 EQGTADPMLALKTIVSCSEYEFLRHHVNRHPRGMEVWENLKREIYSDSMVSPAH 595
           EQGTADPMLALKTIVSCSEYEFLRHHVNRHPRGMEVWENLKREIYSDSMVSPAH
Sbjct: 541 EQGTADPMLALKTIVSCSEYEFLRHHVNRHPRGMEVWENLKREIYSDSMVSPAH 594

[Close]

BLAST of CsaV3_4G030480 vs. ExPASy TrEMBL
Match: A0A5D3C501 (Transcription termination factor MTEF18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G001590 PE=3 SV=1)

HSP 1 Score: 1003.0 bits (2592), Expect = 5.1e-289
Identity = 501/585 (85.64%), Postives = 531/585 (90.77%), Query Frame = 0


Query: 12  MLSSSIIADSKFNFVRVLYWRFGFPSVASNPRFYGNKKAPQTEEHKNSGGMLNMRSRNGR 71
           MLSSSIIADSKFNFVRVLYW  GFPSVASNPRFYGNKKAPQTEE++NSGGMLNM SRNG 
Sbjct: 1   MLSSSIIADSKFNFVRVLYWGIGFPSVASNPRFYGNKKAPQTEEYENSGGMLNMGSRNGH 60

Query: 72  RISRATIKEAQAAMLEYLHSTRGIQFFDADIMSKNSPIFLKKLLGRVEHEGDIGRSIIRF 131
           R+SRATIKEAQAA+ EYLHSTRGI+F DA+ MSKNSPIFLKKLLGRVEH+GDIGRS++RF
Sbjct: 61  RVSRATIKEAQAALFEYLHSTRGIEFLDAENMSKNSPIFLKKLLGRVEHKGDIGRSVMRF 120

Query: 132 LRYHPINEFEPFFESVGLQPAEYNAFLPRNLMFLSDDDLLLENFHVLFNYGVERNKTGKI 191
           LRY+PINEFEPFFESVGLQPAEYNAFLPRNLMFLSDDDLLLENFHVL NYG+ERNKTGKI
Sbjct: 121 LRYNPINEFEPFFESVGLQPAEYNAFLPRNLMFLSDDDLLLENFHVLCNYGIERNKTGKI 180

Query: 192 YKEVTQIFRYEYGVLLSKLKAYEKLGLSQAKVANIVVCNPYLLIGGVNDRFVKVLEKLEN 251
           YKE TQIFRY+YGVL SKL+AYEKLGLSQ  V   VVC+PYLLIGGVNDRFVKVLEKL+N
Sbjct: 181 YKEATQIFRYDYGVLFSKLRAYEKLGLSQDTVVKYVVCSPYLLIGGVNDRFVKVLEKLKN 240

Query: 252 IGFELSWVEEQLTDGNSYNWKQILGLLFWFEQMGCGKEKLADLISQRPDLLLEDSGSKSL 311
           IGFE SWVEEQLTDGNSYNWKQILG  FWFEQMGCGKEKLADLISQ PDLL EDSGSKSL
Sbjct: 241 IGFESSWVEEQLTDGNSYNWKQILGSFFWFEQMGCGKEKLADLISQHPDLLFEDSGSKSL 300

Query: 312 TLIGLLLKMGCSMVQICSVFLQFPQIRVGEFVSNMRQCFLVFNEINMDVQEIGYLFRSRP 371
           +LIGLLLKMGCS +QICSVFLQFPQIRVG+FVSNMRQCFLVFNEINM VQEIGYLFRS P
Sbjct: 301 SLIGLLLKMGCSKIQICSVFLQFPQIRVGKFVSNMRQCFLVFNEINMGVQEIGYLFRSHP 360

Query: 372 LLLGLYTLKRAKSLLGSLNVGKQRLCQFLLENPEELKNLRIGKRVLRLPDSGE--VMRSK 431
           LLLGLYTLK  KSL   L  G +R+CQF+LENPEELKN + G R+L LPDS +  VM SK
Sbjct: 361 LLLGLYTLKSTKSLYKFLKAGNKRICQFILENPEELKNWKHGTRILPLPDSEDRSVMGSK 420

Query: 432 QQKTQFLLKLGLEENSTEMKEALKVFRGKVAILQERFDCIVEAGIDKKDVYKMIKVCPRI 491
           Q K QFLLKLGLEENS +MKEALKVF GK   LQERFDCIVEAGID+KDVYKMIKV PRI
Sbjct: 421 QLKPQFLLKLGLEENSAKMKEALKVFGGKAMDLQERFDCIVEAGIDEKDVYKMIKVYPRI 480

Query: 492 INLRKDTIEEKIDFLVNNLEYPVSSLISFPKYLAFSTKLVALRFSMYNWLKEQGTADPML 551
           INL KD+IEEKIDF VNNL YPVSSLISFPKYL +STKLV LRFSMYNWLKEQGTA+PM 
Sbjct: 481 INLSKDSIEEKIDFFVNNLGYPVSSLISFPKYLGYSTKLVILRFSMYNWLKEQGTANPMS 540

Query: 552 ALKTIVSCSEYEFLRHHVNRHPRGMEVWENLKREIYSDSMVSPAH 595
           ALKTI+SCSEYEFLRHHVNRHPRGMEVWENLKREIYSDSM SPAH
Sbjct: 541 ALKTIISCSEYEFLRHHVNRHPRGMEVWENLKREIYSDSMPSPAH 585

[Close]

BLAST of CsaV3_4G030480 vs. ExPASy TrEMBL
Match: A0A5A7SUH9 (Transcription termination factor MTEF18 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold103G00440 PE=3 SV=1)

HSP 1 Score: 1003.0 bits (2592), Expect = 5.1e-289
Identity = 501/585 (85.64%), Postives = 531/585 (90.77%), Query Frame = 0


Query: 12  MLSSSIIADSKFNFVRVLYWRFGFPSVASNPRFYGNKKAPQTEEHKNSGGMLNMRSRNGR 71
           MLSSSIIADSKFNFVRVLYW  GFPSVASNPRFYGNKKAPQTEE++NSGGMLNM SRNG 
Sbjct: 1   MLSSSIIADSKFNFVRVLYWGIGFPSVASNPRFYGNKKAPQTEEYENSGGMLNMGSRNGH 60

Query: 72  RISRATIKEAQAAMLEYLHSTRGIQFFDADIMSKNSPIFLKKLLGRVEHEGDIGRSIIRF 131
           R+SRATIKEAQAA+ EYLHSTRGI+F DA+ MSKNSPIFLKKLLGRVEH+GDIGRS++RF
Sbjct: 61  RVSRATIKEAQAALFEYLHSTRGIEFLDAENMSKNSPIFLKKLLGRVEHKGDIGRSVMRF 120

Query: 132 LRYHPINEFEPFFESVGLQPAEYNAFLPRNLMFLSDDDLLLENFHVLFNYGVERNKTGKI 191
           LRY+PINEFEPFFESVGLQPAEYNAFLPRNLMFLSDDDLLLENFHVL NYG+ERNKTGKI
Sbjct: 121 LRYNPINEFEPFFESVGLQPAEYNAFLPRNLMFLSDDDLLLENFHVLCNYGIERNKTGKI 180

Query: 192 YKEVTQIFRYEYGVLLSKLKAYEKLGLSQAKVANIVVCNPYLLIGGVNDRFVKVLEKLEN 251
           YKE TQIFRY+YGVL SKL+AYEKLGLSQ  V   VVC+PYLLIGGVNDRFVKVLEKL+N
Sbjct: 181 YKEATQIFRYDYGVLFSKLRAYEKLGLSQDTVVKYVVCSPYLLIGGVNDRFVKVLEKLKN 240

Query: 252 IGFELSWVEEQLTDGNSYNWKQILGLLFWFEQMGCGKEKLADLISQRPDLLLEDSGSKSL 311
           IGFE SWVEEQLTDGNSYNWKQILG  FWFEQMGCGKEKLADLISQ PDLL EDSGSKSL
Sbjct: 241 IGFESSWVEEQLTDGNSYNWKQILGSFFWFEQMGCGKEKLADLISQHPDLLFEDSGSKSL 300

Query: 312 TLIGLLLKMGCSMVQICSVFLQFPQIRVGEFVSNMRQCFLVFNEINMDVQEIGYLFRSRP 371
           +LIGLLLKMGCS +QICSVFLQFPQIRVG+FVSNMRQCFLVFNEINM VQEIGYLFRS P
Sbjct: 301 SLIGLLLKMGCSKIQICSVFLQFPQIRVGKFVSNMRQCFLVFNEINMGVQEIGYLFRSHP 360

Query: 372 LLLGLYTLKRAKSLLGSLNVGKQRLCQFLLENPEELKNLRIGKRVLRLPDSGE--VMRSK 431
           LLLGLYTLK  KSL   L  G +R+CQF+LENPEELKN + G R+L LPDS +  VM SK
Sbjct: 361 LLLGLYTLKSTKSLYKFLKAGNKRICQFILENPEELKNWKHGTRILPLPDSEDRSVMGSK 420

Query: 432 QQKTQFLLKLGLEENSTEMKEALKVFRGKVAILQERFDCIVEAGIDKKDVYKMIKVCPRI 491
           QQK QFLLKLGLE NS +MKEALKVF GK   LQERFDCIVEAGID+KDVYKMIKV PRI
Sbjct: 421 QQKPQFLLKLGLEGNSAKMKEALKVFGGKAMDLQERFDCIVEAGIDEKDVYKMIKVYPRI 480

Query: 492 INLRKDTIEEKIDFLVNNLEYPVSSLISFPKYLAFSTKLVALRFSMYNWLKEQGTADPML 551
           INL KD+IEEKIDF VNNL YPVSSLISFPKYL +STKLV LRFSMYNWLKEQGTA+PM 
Sbjct: 481 INLSKDSIEEKIDFFVNNLGYPVSSLISFPKYLGYSTKLVILRFSMYNWLKEQGTANPMS 540

Query: 552 ALKTIVSCSEYEFLRHHVNRHPRGMEVWENLKREIYSDSMVSPAH 595
           ALKTI+SCSEYEFLRHHVNRHPRGMEVWENLKREIYSDSM SPAH
Sbjct: 541 ALKTIISCSEYEFLRHHVNRHPRGMEVWENLKREIYSDSMPSPAH 585

[Close]

BLAST of CsaV3_4G030480 vs. ExPASy TrEMBL
Match: A0A5A7SWK2 (Transcription termination factor MTEF18 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold103G00430 PE=3 SV=1)

HSP 1 Score: 936.0 bits (2418), Expect = 7.6e-269
Identity = 469/583 (80.45%), Postives = 515/583 (88.34%), Query Frame = 0


Query: 12  MLSSSIIADSKFNFVRVLYWRFGFPSVASNPRFYGNKKAPQTEEHKNSGGMLNMRSRNGR 71
           MLSSSIIADSKFNFVRVLYW   F SVASN RFYG KKAPQTEE++NSGGMLN+ SRNG 
Sbjct: 1   MLSSSIIADSKFNFVRVLYWGIRFSSVASNHRFYGTKKAPQTEEYENSGGMLNVHSRNGH 60

Query: 72  RISRATIKEAQAAMLEYLHSTRGIQFFDADIMSKNSPIFLKKLLGRVEHEGDIGRSIIRF 131
           RI R TI +AQAA+LEYLHSTRGI F DA+ MSK+SPIFLKKLL +VEHEGDIGRSI+RF
Sbjct: 61  RIYRPTIMKAQAALLEYLHSTRGIGFLDAENMSKSSPIFLKKLLAKVEHEGDIGRSIMRF 120

Query: 132 LRYHPINEFEPFFESVGLQPAEYNAFLPRNLMFLSDDDLLLENFHVLFNYGVERNKTGKI 191
           LRY+PINEFEPFFESVGLQPAEY+AFLPRNLMFLSDDDLLLENFHVL NYG+ERNKTGKI
Sbjct: 121 LRYNPINEFEPFFESVGLQPAEYSAFLPRNLMFLSDDDLLLENFHVLCNYGIERNKTGKI 180

Query: 192 YKEVTQIFRYEYGVLLSKLKAYEKLGLSQAKVANIVVCNPYLLIGGVNDRFVKVLEKLEN 251
           YKE TQIFRY+YGVLLSKLKAYEKLGLSQA V   VV NPYLLIGGVND+FVKVLEKL+N
Sbjct: 181 YKEATQIFRYDYGVLLSKLKAYEKLGLSQATVVRFVVSNPYLLIGGVNDQFVKVLEKLKN 240

Query: 252 IGFELSWVEEQLTDGNSYNWKQILGLLFWFEQMGCGKEKLADLISQRPDLLLEDSGSKSL 311
           IGFE SWVEEQLT+G SYNWKQILGLLFWFEQMGC KEKLADLISQ PDLL EDSGS+SL
Sbjct: 241 IGFESSWVEEQLTNGISYNWKQILGLLFWFEQMGCSKEKLADLISQHPDLLFEDSGSRSL 300

Query: 312 TLIGLLLKMGCSMVQICSVFLQFPQIRVGEFVSNMRQCFLVFNEINMDVQEIGYLFRSRP 371
           +LIGLLLKMGCS +QICS+FLQFPQIRVG+FVSNMRQCFLVFNEINM VQEI YLFRS P
Sbjct: 301 SLIGLLLKMGCSTIQICSMFLQFPQIRVGKFVSNMRQCFLVFNEINMGVQEIEYLFRSHP 360

Query: 372 LLLGLYTLKRAKSLLGSLNVGKQRLCQFLLENPEELKNLRIGKRVLRLPDSGEVMRSKQQ 431
            +LG YTLK  KSL  +LNVGK+RLCQ++LENPEELKNL++G  VL LP SG++MRSKQQ
Sbjct: 361 HILGSYTLKTTKSLFSTLNVGKKRLCQYILENPEELKNLKVGTTVLPLPGSGDIMRSKQQ 420

Query: 432 KTQFLLKLGLEENSTEMKEALKVFRGKVAILQERFDCIVEAGIDKKDVYKMIKVCPRIIN 491
           KTQFLL LGLEENS +MK   K+ RGK A LQERFDCIVEAGID+KDV+KMI+  P+I+N
Sbjct: 421 KTQFLLNLGLEENSKKMK---KLLRGKGAELQERFDCIVEAGIDEKDVHKMIQDAPKILN 480

Query: 492 LRKDTIEEKIDFLVNNLEYPVSSLISFPKYLAFSTKLVALRFSMYNWLKEQGTADPMLAL 551
             KD IEEKIDFLVNNL YPVSS+ISFP YL+++TK V LRF MYNWLKEQGT   +L +
Sbjct: 481 QTKDIIEEKIDFLVNNLGYPVSSIISFPSYLSYTTKRVTLRFLMYNWLKEQGTIKRILQM 540

Query: 552 KTIVSCSEYEFLRHHVNRHPRGMEVWENLKREIYSDSMVSPAH 595
            TIVSC+E EFL+ +VN HPRGMEVWENLKREIYSDSM SPAH
Sbjct: 541 STIVSCTENEFLKRYVNHHPRGMEVWENLKREIYSDSMASPAH 580

[Close]

BLAST of CsaV3_4G030480 vs. ExPASy TrEMBL
Match: A0A5D3C248 (Transcription termination factor MTEF18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G001580 PE=3 SV=1)

HSP 1 Score: 934.5 bits (2414), Expect = 2.2e-268
Identity = 468/583 (80.27%), Postives = 514/583 (88.16%), Query Frame = 0


Query: 12  MLSSSIIADSKFNFVRVLYWRFGFPSVASNPRFYGNKKAPQTEEHKNSGGMLNMRSRNGR 71
           MLSSSIIADSKFNFVRVLYW   F SVASN RFYG KKAPQTEE++NSGGMLN+ SRNG 
Sbjct: 1   MLSSSIIADSKFNFVRVLYWGIRFSSVASNHRFYGTKKAPQTEEYENSGGMLNVHSRNGH 60

Query: 72  RISRATIKEAQAAMLEYLHSTRGIQFFDADIMSKNSPIFLKKLLGRVEHEGDIGRSIIRF 131
           RI R TI +AQAA+LEYLHSTRGI F DA+ MSK+SPIFLKKLL +VEHEGDIGRSI+RF
Sbjct: 61  RIYRPTIMKAQAALLEYLHSTRGIGFLDAENMSKSSPIFLKKLLAKVEHEGDIGRSIMRF 120

Query: 132 LRYHPINEFEPFFESVGLQPAEYNAFLPRNLMFLSDDDLLLENFHVLFNYGVERNKTGKI 191
           LRY+PINEFEPFFESVGLQPAEY+AFLPRNLMFLSDDDLLLENFHVL NYG+ERNKTGKI
Sbjct: 121 LRYNPINEFEPFFESVGLQPAEYSAFLPRNLMFLSDDDLLLENFHVLCNYGIERNKTGKI 180

Query: 192 YKEVTQIFRYEYGVLLSKLKAYEKLGLSQAKVANIVVCNPYLLIGGVNDRFVKVLEKLEN 251
           YKE TQIFRY+YGVLLSKLKAYEKLGLSQA V   VV NPYLLIGGVND+FVKVLEKL+N
Sbjct: 181 YKEATQIFRYDYGVLLSKLKAYEKLGLSQATVVRFVVSNPYLLIGGVNDQFVKVLEKLKN 240

Query: 252 IGFELSWVEEQLTDGNSYNWKQILGLLFWFEQMGCGKEKLADLISQRPDLLLEDSGSKSL 311
           IGFE SWVEEQLT+G SYNWKQILGLLFWFEQMGC KEKLADLISQ PDLL EDSGS+SL
Sbjct: 241 IGFESSWVEEQLTNGISYNWKQILGLLFWFEQMGCSKEKLADLISQHPDLLFEDSGSRSL 300

Query: 312 TLIGLLLKMGCSMVQICSVFLQFPQIRVGEFVSNMRQCFLVFNEINMDVQEIGYLFRSRP 371
           +LIG LLKMGCS +QICS+FLQFPQIRVG+FVSNMRQCFLVFNEINM VQEI YLFRS P
Sbjct: 301 SLIGFLLKMGCSTIQICSMFLQFPQIRVGKFVSNMRQCFLVFNEINMGVQEIEYLFRSHP 360

Query: 372 LLLGLYTLKRAKSLLGSLNVGKQRLCQFLLENPEELKNLRIGKRVLRLPDSGEVMRSKQQ 431
            +LG YTLK  KSL  +LNVGK+RLCQ++LENPEELKNL++G  VL LP SG++MRSKQQ
Sbjct: 361 HILGSYTLKTTKSLFSTLNVGKKRLCQYILENPEELKNLKVGTTVLPLPGSGDIMRSKQQ 420

Query: 432 KTQFLLKLGLEENSTEMKEALKVFRGKVAILQERFDCIVEAGIDKKDVYKMIKVCPRIIN 491
           KTQFLL LGLEENS +MK   K+ RGK A LQERFDCIVEAGID+KDV+KMI+  P+I+N
Sbjct: 421 KTQFLLNLGLEENSKKMK---KLLRGKGAELQERFDCIVEAGIDEKDVHKMIQDAPKILN 480

Query: 492 LRKDTIEEKIDFLVNNLEYPVSSLISFPKYLAFSTKLVALRFSMYNWLKEQGTADPMLAL 551
             KD IEEKIDFLVNNL YPVSS+ISFP YL+++TK V LRF MYNWLKEQGT   +L +
Sbjct: 481 QTKDIIEEKIDFLVNNLGYPVSSIISFPSYLSYTTKRVTLRFLMYNWLKEQGTIKRILQM 540

Query: 552 KTIVSCSEYEFLRHHVNRHPRGMEVWENLKREIYSDSMVSPAH 595
            TIVSC+E EFL+ +VN HPRGMEVWENLKREIYSDSM SPAH
Sbjct: 541 STIVSCTENEFLKRYVNHHPRGMEVWENLKREIYSDSMASPAH 580

[Close]

BLAST of CsaV3_4G030480 vs. TAIR 10
Match: AT5G06810.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 466.5 bits (1199), Expect = 3.3e-131
Identity = 249/557 (44.70%), Postives = 365/557 (65.53%), Query Frame = 0


Query: 36   PSVASNPRFYGNKKAPQTEEHKNSGGMLNMRSRNGRRISRATIKEAQAAMLEYLHSTRGI 95
            P ++ NPRF+  ++A    + + SG    +R+RN  R      K AQ AM +Y + TRG+
Sbjct: 589  PQLSRNPRFFATQRA--LVDAEVSGEKWGLRTRNEIR------KVAQVAMFDYFYQTRGL 648

Query: 96   QFFDADIMSKNSPIF----LKKLLG---RVEHEGDIGRSIIRFLRYHPINEFEPFFESVG 155
            QF  A+ MSKN+P+F    LKKL G    V+ + DI ++I RFL +HP+NEFEPF ES+G
Sbjct: 649  QFLVAESMSKNAPVFNDNLLKKLNGCDVDVDDDDDIVKAITRFLWFHPVNEFEPFLESLG 708

Query: 156  LQPAEYNAFLPRNLMFLSDDDLLLENFHVLFNYGVERNKTGKIYKEVTQIFRYEYGVLLS 215
            L+P+E++  +P + MFL++D  LLEN+HV +NYG+ R K GKI+KE  ++F YE GVL S
Sbjct: 709  LKPSEFSHLIPCDKMFLNEDAFLLENYHVFWNYGIGREKMGKIFKEAREVFGYETGVLAS 768

Query: 216  KLKAYEKLGLSQAKVANIVVCNPYLLIGGVNDRFVKVLEKLENIGFELSWVEEQLTDGNS 275
            K+K+YE LG S+  ++ ++VC+P +LIG +N    KV+E L+ IGF + WV E L++  S
Sbjct: 769  KIKSYEDLGFSKLFLSKLIVCSPSILIGDMNVGLAKVMEMLKAIGFGVDWVTENLSEEVS 828

Query: 276  YNWKQILGLLFWFEQMGCGKEKLADLISQRPDLLLEDSGSKSLTLIGLLLKMGCSMVQIC 335
            Y+W  +   L +   +   + +L +LI + P L+ EDSG  +L L G   K+G S  ++ 
Sbjct: 829  YDWSSMHRCLSFLRDLYVDENELCELIRKMPRLIFEDSGEWTLILAGFEAKLGSSRSELS 888

Query: 336  SVFLQFPQIR-VGEFVSNMRQCFLVFNEINMDVQEIGYLFRSRPLLLGLYTLKRAKSLLG 395
            S+F +FPQ + +G+FV N+R CFL   +I MD  EIG +FR   L +G+  LK+  +LL 
Sbjct: 889  SLFQKFPQCQSLGKFVLNLRHCFLFLKDIEMDDDEIGKIFRLHSLWIGVSRLKQTSTLLI 948

Query: 396  SLNVGKQRLCQFLLENPEELKNLRIGKRVLRLPDSGEVM--RSKQQKTQFLLKLGLEENS 455
            +L  GK RLCQ + ENPEE+K   +G RV  LP +G  +  +SK  KTQFLL LG +ENS
Sbjct: 949  NLKGGKGRLCQVIQENPEEMKKWIMGLRVQPLPATGYKVNTKSKTMKTQFLLDLGYKENS 1008

Query: 456  TEMKEALKVFRGKVAILQERFDCIVEAGIDKKDVYKMIKVCPRIINLRKDTIEEKIDFLV 515
             EM+ ALK FRGK + L+ERF+ +V  G+ +KDV  M+K CP I+    D +E K+++LV
Sbjct: 1009 EEMERALKNFRGKGSELRERFNVLVSFGLTEKDVKDMVKACPSILTQACDILESKVNYLV 1068

Query: 516  NNLEYPVSSLISFPKYLAFSTKLVALRFSMYNWLKEQGTADPMLALKTIVSCSEYEFLRH 575
              L YP+S+L++FP  L ++ + + LRFSM++WL+++G ADP L + TI+ CS+  F   
Sbjct: 1069 KELGYPLSTLVTFPTCLKYTLQRMKLRFSMFSWLQDRGKADPKLQVSTILVCSDKFFATR 1128

Query: 576  HVNRHPRGMEVWENLKR 583
             VNRHP G +  E+LK+
Sbjct: 1129 FVNRHPDGPKHLEDLKK 1137

[Close]

BLAST of CsaV3_4G030480 vs. TAIR 10
Match: AT4G19650.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 392.9 bits (1008), Expect = 4.6e-109
Identity = 201/486 (41.36%), Postives = 303/486 (62.35%), Query Frame = 0


Query: 98  FDADIMSKNSPIFLKKLLGRV-EHEGDIGRSIIRFLRYHPINEFEPFFESVGLQPAEYNA 157
           +  + +SKNSP F+  LL ++ +++ D+ + + +FLRY+PINEFEPFFES+GL P E+  
Sbjct: 87  YQLEHISKNSPCFMSTLLSKIDDNQKDVSKGLTKFLRYNPINEFEPFFESLGLCPYEFET 146

Query: 158 FLPRNLMFLSDDDLLLENFHVLFNYGVERNKTGKIYKEVTQIFRYEYGVLLSKLKAYEKL 217
           FLPR LMFLSDD ++ ENFH L NYG+ R K G++YKE  +IFRYE G+L  KL+ YE L
Sbjct: 147 FLPRKLMFLSDDGIMFENFHALCNYGIPRGKIGRMYKEAREIFRYESGMLAMKLRGYENL 206

Query: 218 GLSQAKVANIVVCNPYLLIGGVNDRFVKVLEKLENIGFELSWVEEQLTDGNSYNWKQILG 277
           GLS+A V  +V   P LL+GG++  F  V++KL+ +     W+   L+D  +Y+W++IL 
Sbjct: 207 GLSKATVIKLVTSCPLLLVGGIDAEFSSVVDKLKGLQVGCDWLGRYLSDRKTYSWRRILE 266

Query: 278 LLFWFEQMGCGKEKLADLISQRPDLLLEDSGSKSLTLIGLLLKMGCSMVQICSVFLQFPQ 337
            + + +++GC +EKL+ L+   P L++E SG K   L G L K G  + +I  +F+  P+
Sbjct: 267 TIEFLDKVGCKEEKLSSLLKTYPALVIEGSGKKFYVLFGRLFKAGLQVNEIYRLFIDNPE 326

Query: 338 IRVGEFVSNMRQCFLVFNEINMDVQEIGYLFRSRPLLLGLYTLKRAKSLLGSLNVGKQRL 397
           +   + V N+++       I M+ Q I  +  S   L+G  +L   ++   SLNV +  L
Sbjct: 327 MLSDKCVKNIQKTLDFLIAIRMETQFITKILLSHMELIGSCSLPAPRTACLSLNVKQDEL 386

Query: 398 CQFLLENPEELKNLRIGKRVLRLPDSGEVMRSKQQKTQFLLKLGLEENSTEMKEALKVFR 457
           C+ L + P  L       +  +     E  R   +KT+FLL+LG  ENS EM +ALK FR
Sbjct: 387 CKILKKEPLRLFCFVSTTKKRKSKPLSEDSRKYLEKTEFLLRLGYVENSDEMVKALKQFR 446

Query: 458 GKVAILQERFDCIVEAGIDKKDVYKMIKVCPRIINLRKDTIEEKIDFLVNNLEYPVSSLI 517
           G+   LQERFDC+V+AG++   V ++I+  P I+NL KD IE+KI  L   L YP+ SL+
Sbjct: 447 GRGDQLQERFDCLVKAGLNYNVVTEIIRHAPMILNLSKDVIEKKIHSLTELLGYPIESLV 506

Query: 518 SFPKYLAFSTKLVALRFSMYNWLKEQGTADPMLALKTIVSCSEYEFLRHHVNRHPRGMEV 577
            FP YL +  + +  RFSMY WL+E+  A PML+  TI++C +  F+++ VN HP G  +
Sbjct: 507 RFPAYLCYDMQRIHHRFSMYLWLRERDAAKPMLSPSTILTCGDARFVKYFVNVHPEGPAI 566

Query: 578 WENLKR 583
           WE++ +
Sbjct: 567 WESINQ 572

[Close]

BLAST of CsaV3_4G030480 vs. TAIR 10
Match: AT5G45113.1 (mitochondrial transcription termination factor-related / mTERF-related )

HSP 1 Score: 267.7 bits (683), Expect = 2.2e-71
Identity = 150/412 (36.41%), Postives = 233/412 (56.55%), Query Frame = 0


Query: 171 LLENFHVLFNYGVERNKTGKIYKEVTQIFRYEYGVLLSKLKAYEKLGLSQAKVANIVVCN 230
           + ENFHVL  YG+ R+K G++YKE  +IF YE GVL SKL+ YE L L +A V  +V C 
Sbjct: 1   MFENFHVLCYYGIPRDKIGRLYKEAREIFVYENGVLASKLEPYEILVLRKAIVIKLVTCC 60

Query: 231 PYLLIGGVNDRFVKVLEKLENIGFELSWVEEQLTDGNSYNWKQILGLLFWFEQMGCGKEK 290
           P LL+GG++  FV V+ KL+ +     W+   L+   +YNW++IL  +   E++G  ++K
Sbjct: 61  PLLLVGGIDCEFVSVVNKLKGLNLGCDWLARYLSVRKTYNWRRILETMELLEKVGFKEKK 120

Query: 291 LADLISQRPDLLLEDSGSKSLTLIGLLLKMGCSMVQICSVFLQFPQIRVGEFVSNMRQCF 350
           L++L+   PDL+ E SG+K+  +     K+G  M +I  + +   ++ + + V  + +  
Sbjct: 121 LSNLLKAYPDLVGETSGNKAYIMFEKFHKVGLQMNEIDKLLIDNSEMLLEKSVKRILEAL 180

Query: 351 LVFNEINMDVQEIGYLFRSRPLLLGLYTLKRAKSLLGSLNVGKQRLCQFLLENPEELKNL 410
                I ++ Q +    +     +   +L   +++   L + +  LCQ + E P  L ++
Sbjct: 181 KFLKCIRIEKQFVVRFLQCHMKHICSSSLLVPRAVWNRLKIRRDELCQIIKEEPLRLFSI 240

Query: 411 RIGKRVLRLPDSGEVMRSKQQKTQFLLKLGLEENSTEMKEALKVFRGKVAILQERFDCIV 470
                  R+ +   +     +KT FLLKLG  ENS EM  ALK F+G+   LQERFDC V
Sbjct: 241 ASKTNKGRI-ELDSLDSRNAEKTTFLLKLGYVENSDEMVRALKKFQGRGDELQERFDCFV 300

Query: 471 EAGIDKKDVYKMIKVCPRIINLRKDTIEEKIDFLVNNLEYPVSSLISFPKYLAFSTKLVA 530
           +AG+D   V +++K  P I+N  KD IE+KI  L++ L YP+ S+I  P YL +S K + 
Sbjct: 301 KAGLDYNVVSQLVKRAPHILNRPKDIIEKKIIMLIDYLVYPIESVIESPTYLCYSMKRIH 360

Query: 531 LRFSMYNWLKEQGTADPMLALKTIVSCSEYEFLRHHVNRHPRGMEVWENLKR 583
            RF+MY WL+E+    P L L T+V  S    + + VN HP G   WEN+K+
Sbjct: 361 QRFTMYIWLRERDAVIPRLTLGTVVGISNTLIVPYFVNTHPEGPATWENIKK 411

[Close]

BLAST of CsaV3_4G030480 vs. TAIR 10
Match: AT3G60400.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 187.6 bits (475), Expect = 2.9e-47
Identity = 134/515 (26.02%), Postives = 237/515 (46.02%), Query Frame = 0


Query: 78  IKEAQAAMLEYLHSTRGIQFFDADIMSKNSPIFLKKLLGRVEHE-GDIGRSIIRFLRYHP 137
           I +AQ A+ +YLH+TR + +  A+ ++ N+ + ++ L+ +++       +S+ + L YHP
Sbjct: 34  IGKAQQAITDYLHTTRSLSYTHAEQIASNASVSIRNLILKLDFSVPTFSKSLRKHLSYHP 93

Query: 138 INEFEPFFESVGLQPAEYNAFLPRNLMFLSDDDLLLENFHVLFNYGVERNKTGKIYKEVT 197
           INEFE FFES+G+  +E + FLP    F S+D  +L+    L  +G   NK GK+YKE  
Sbjct: 94  INEFEFFFESIGIDYSEVSEFLPEKKFFFSEDRTVLDAAFALSGFGFPWNKLGKLYKEER 153

Query: 198 QIFRYEYGVLLSKLKAYEKLGLSQAKVANIVVCNPYLLIGG--VNDRFVKVLEKLENIGF 257
            +F    G + S+L  ++ +G S   V    +  P  L GG  +      +  KL+ +  
Sbjct: 154 LVFVQRPGEIESRLLKFKDIGFSTVAVIGTCLAIPRTLCGGGELGSEIRCLFVKLKRLFD 213

Query: 258 ELSWVEEQLTDGNSYNWKQILGLLFWFEQMGCGKEKLADLISQRPDLLLEDSGSKSLTLI 317
           E       L + N  +W  +   +  F  +GC  E++ +L+ +   L LE S    +   
Sbjct: 214 EFD--SHHLFEENVDSWLAVSRKIRIFYDLGCENEEMWELMCRNKSLFLEYSEEALMNKA 273

Query: 318 GLLLKMGCSMVQICSVFLQFPQIRVGEFVSNMRQCFLVFNEINMDVQEIGYLFRSRPLLL 377
           G   + G S      + L+ P I   +    +     +     +   E+  + +  P + 
Sbjct: 274 GYFCRFGVSKEDAALLILRNPAIMNFDLEKPVISVTGMLKHFGLRQDEVDAVAQKYPYVF 333

Query: 378 GLYTLKRAKSLLGSL-----------NVGKQRLCQFLLENPEELKNLRIGKRVLRLPDSG 437
           G   LK    +L ++           N     L  + L +P+E       + +  L +S 
Sbjct: 334 GRNQLKNLPYVLRAIDLHERIFDILKNGNHHLLASYTLMDPDEDLEREYQEGLEELQNS- 393

Query: 438 EVMRSKQQKTQFLLKLGLEENSTEMKEALKVFRGKVAILQERFDCIVEAGIDKKDVYKMI 497
              R   QK  FL ++G  EN   MK  L+   G    L +RF  ++ +GI    +  +I
Sbjct: 394 RTKRHNIQKLDFLHEIGFGENGITMK-VLQHVHGTAVELHDRFQILLNSGIIFSKICMLI 453

Query: 498 KVCPRIINLRKDTIEEKIDFLVNNLEYPVSSLISFPKYLAFSTK-LVALRFSMYNWLKEQ 557
           +  P+I+N +  +I++K+ FL   +   +  L  FP YL F  +  ++ RF  + WL E+
Sbjct: 454 RSAPKILNQKPHSIQDKLRFLCGEMGDSLDYLEVFPAYLCFDLENRISPRFRFHKWLVEK 513

Query: 558 GTADPMLALKTIVSCSEYEFLRHHVNRHPRGMEVW 578
           G ++   ++ +IV+ SE  F+      HP   + W
Sbjct: 514 GFSEKSYSIASIVATSEKAFIARLYGIHPAIPKHW 544

[Close]

BLAST of CsaV3_4G030480 vs. TAIR 10
Match: AT1G74120.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 60.5 bits (145), Expect = 5.4e-09
Identity = 32/121 (26.45%), Postives = 65/121 (53.72%), Query Frame = 0


Query: 465 RFDCIVEAGIDKKDVYKMIKVCPRIINLRKDTIEEKIDFLVNNLEYPVSSLISFPKYLAF 524
           R DC+ + G+ ++D +K++   PR+I    + IE+KI+FL N + + ++ L   P+YL  
Sbjct: 288 RVDCLCKYGLIRRDAFKVVWKEPRVILYEIEDIEKKIEFLTNRMGFHINCLADVPEYLGV 347

Query: 525 S-TKLVALRFSMYNWLKEQGTADPMLALKTIVSCSEYEFLRHHVNRHPRGMEVWENLKRE 584
           +  K +  R+++ ++LK +G     + LK ++  S   F   +V  +P    ++   K  
Sbjct: 348 NLQKQIVPRYNVIDYLKLKGGLGCDIGLKGLIKPSMKRFYNLYVMPYPECERIFGKRKEN 407

The following BLAST results are available for this feature:

BLAST of CsaV3_4G030480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146406.1	0.0e+00	100.00	transcription termination factor MTEF18, mitochondrial isoform X1 [Cucumis sativ...	[more]
XP_031740462.1	3.2e-306	100.00	transcription termination factor MTEF18, mitochondrial isoform X2 [Cucumis sativ...	[more]
KAA0034914.1	1.0e-288	85.64	transcription termination factor MTEF18 [Cucumis melo var. makuwa]	[more]
TYK05456.1	1.0e-288	85.64	transcription termination factor MTEF18 [Cucumis melo var. makuwa]	[more]
KAA0034913.1	1.6e-268	80.45	transcription termination factor MTEF18 [Cucumis melo var. makuwa]	[more]

BLAST of CsaV3_4G030480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M219	4.1e-46	26.02	Transcription termination factor MTEF18, mitochondrial OS=Arabidopsis thaliana O...	[more]
Q9C6A1	7.6e-08	26.45	Transcription termination factor MTERF15, mitochondrial OS=Arabidopsis thaliana ...	[more]

BLAST of CsaV3_4G030480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2G9	0.0e+00	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G507370 PE=3 SV=1	[more]
A0A5D3C501	5.1e-289	85.64	Transcription termination factor MTEF18 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7SUH9	5.1e-289	85.64	Transcription termination factor MTEF18 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7SWK2	7.6e-269	80.45	Transcription termination factor MTEF18 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3C248	2.2e-268	80.27	Transcription termination factor MTEF18 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of CsaV3_4G030480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06810.1	3.3e-131	44.70	Mitochondrial transcription termination factor family protein	[more]
AT4G19650.1	4.6e-109	41.36	Mitochondrial transcription termination factor family protein	[more]
AT5G45113.1	2.2e-71	36.41	mitochondrial transcription termination factor-related / mTERF-related	[more]
AT3G60400.1	2.9e-47	26.02	Mitochondrial transcription termination factor family protein	[more]
AT1G74120.1	5.4e-09	26.45	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 480..511 e-value: 0.083 score: 22.0 coord: 189..219 e-value: 100.0 score: 11.5 coord: 224..255 e-value: 3.7 score: 16.5
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 430..563 e-value: 1.7E-15 score: 56.8 coord: 280..444 e-value: 4.4E-10 score: 39.0
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 42..581
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 136..265 e-value: 2.4E-8 score: 35.4 coord: 308..582 e-value: 1.1E-44 score: 154.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..66
None	No IPR available	PANTHER	PTHR13068:SF38	TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN	coord: 42..581

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G030480.1	CsaV3_4G030480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding