CsaV3_4G010150 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_4G010150
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Nuclear cap-binding protein subunit 2
Location	chr4: 7943232 .. 7952977 (+)
RNA-Seq Expression	CsaV3_4G010150
Synteny	CsaV3_4G010150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAAAACTCGTTTCTCTAAAAATCCATCCCATAACTCTTCGTACCTTTAAAGATTATGGTTAATTTCCCATTTTATTTGTTTTTTCTCTTTTTGCAATTTACCCTTTTCCTATCCCATTAACCCAAAGTTAAGTTATGCTTACAATTTTGCCTATTTCGATTTTGCCTTCCTCTTCCTCTTGCTCTAAAATCGTCCACCATTAGCAGCGCGCGTCCAGGTCTGAAAGGCCGCCATTGCCTTTGGTTGAGGCTCGACAGAAGCTTGTTGTTTGCTGATTACCTTTTTCTCAGCGTCGAGAAGAACGCCCAACTCAGCAAGCGTCATTTATCGTGTCTCTGGTGCGAATAGAGTCAGTTGAACGAGCTTTCATTTGAACCGCCTCTAATCTCTGTTCCTCTGCTTCTTCCTTTTTCCCTTTTGTTCTTCGCCTTGGGTGATTAACGTCCCAACTTACCAACACTTGATATATACTTGCTCTACCTAAACTGGGTTTTGAGTTTTGGTCCAGATTTTGTTGTTCTAGGGTTCATGGCTTCGTTGTTCAAGGTAAATTGTTTTTTCGTTTCCTACATCTCTGCGTGCAGTTAATATTTCATTCACGAGTTAATTCATTTTCCGCTCCATTAGGTTTATGGGGTTGTCAAAGTTTCAAACACGTCTTTACAAGTTTTATTCAGACATGTTTCAGAGTTTATATGAACTGAATTAAGGATGTGTTTTGTTTCGATTCATTTTAATTGCGAGATTAATCTAGTGCCAAATGTTGTCATTTTAGTTTGGGCGTCGGGGGAGTAGGCCGTTGGTGTTTCAAATTATGTTAGTCATATTGCGGTGGCAATACGTGTTGGATAAATTAAACCTAGTCCCCCATTCCGGTATAGATGATTTTAACTAATGGTTGTTGTTTCTTATCCCAAAAGGCATGGACTTTGTACCTCATAATCGTTTTATAGCTTCTGATCGATATTGTAGTTTTTTCACCATTCTTTTGAGTTGAGTTGATGAGATTGGAATATCTGAACTCTTGGTTGGTTGACTATATACGCTAAATCAGTTGCATTGAAGTTGACAATTGTCACCTTTATGGCAAGGGTACTCTGATTATTTTTATTACAGATAGTAGTGTCTTAATGTTAAAACGAAGAAAACAGTCAAAGCTCAAATTAGTTTGAAAGGAATAATGTCACACATAAGTAGCTAGACGATCAATAATTTTTCTATGATTCAATCTAAGACAAGAGTCCTGCTTTCAACTTTATCTTTTGTAGGACCCAACAAAGCTATCAATTTATCGGGATAGAAGATTTCATGGATCACAAGATGAATTTGAAGTGGCACTTCAGACTTCAACCACTGTTTATGTGGGAAATATGTCCTTCTATACGACAGAGGAGCAAGTATATGAGCTTTTTTCTCGAGCTGGAGAAATTAAGAAGATAATCATGGGTTTGGATAAGAATTCAAAAACGCCTTGTGGCTTTTGTTTTGTCCTGTAAGACTTCCATAGTTCTTCCTAACTATAGAATATCTTGACATGCTTTTTATGAATATTCAAGCATACACTTTTCTACCATGGTTCTACCATTGGATTAATTATTAAACTTATTTATGTCCACTGCTCTAAACTGTATGCTGTTGATAGTATCATACTAGAGTCATGGGAGGGAGAGAGTACTCTCTTCAAAACTACCCATATGTGTTACAGACCTTGTAACTTAATCTTATGATGACTTTTCGTTAGATACTCCGATTTCTATCTGTGGTTCGTTAATGCAGTTACTGCTTTGTTCTGTCCATAGATATCACTTCATATATTCCCATGAGTTTTTTTATCCTCACGAGTCATGATTGGCACCTGTTTAGTGCAAATTATTTTAAATGCTTGAATGCATTTGATAATGAATGATATTTTATCTATTCGGGTTGATTTTAACCTTGTGATATTTTGCTCATCTCATGCCTTTGGTTCCCATTCTTGAAAGACATGATTTACGTATATCTGCCTCTAAGCCTTTCAAATTATGGGCAAATCTTTTTAATGGTTGCTTATTTTATCTGTACTTTGTTAGATACTATTCTCGGGAGGATACCGAGGATGCTGTAAAATATATAAGTGGAACAATTCTTGATGATCGTCCCATCCGTGTGGATTTTGATTGGGGATTTCAGGATGGCAGGCAATGGGGCCGTGGTCGAAGTGGTGGACAGGTACACTTTTGGATTTGTGTCACATTCATGATTTTGGAGTTGACCATCACTTCCTGTTTATTTCCTTTTGCTTTGTTGTTCACAGGTGCGTGATGAATATCGAACAGACTATGATCCTGATATCCTTTTTTCTTTTCAAGAGTATTACGTACTATTATGTTATGGAAACCCCAGGGTTTGATGCTCTAAAAAATATATTTCTTTGGGTACCATTTACCAACTCAATATTCTTTGTCTCTCTTTTCATACATACATACATACTTACTTTTATATATGCAGATACTTATATACTATTGATTTCTATCACACTTTTTCTTTGGTGTAATCTAAAGATTCTAAACACAAGTACAGAAATCTAGTTTCATGTAATAAATTTCAGGTTAAAAATCATTATTAGTCCCTTAACTTTCATGAAAGTAACAATTTGGTCCCTAAACTTTCTGATAGACCACCAATTATATTACAATATAGTAGGAGGAAAAAGGGAGCAGTTGCACGTGAACAAGAGAAGGGAAATGGAGAAAGAAGTGGAAACCACCTTGGTGGGGACTACGGTTAGTTACATGGGAGGGAGTTAAAAGGGAAAGAAGGGAAGAGAGGGGTGGTTAGTCAGTTTCTGGAAGTGGAGGGCTGTAATTTTCTGGGGAGCAGGGAATGTGTTAGATACCTAGATTAGTATAGGGTAGGGGTAAAAGGGTAATTAGATTTGTTGGTAGTTAGTTGGTTATAAATAGGAAGTTGAGGAGGGAAGAAGGGTATGAAGAATTTGGTGAAGAATTAGGACTGCAACATTCCTTGAAAGAGAGGAAGGGCAGAGGGTTAGGGTTCTTTTACTTCTTTTATATTGTAATTTCTGTGAAGATATTAATAAAATAGAAACACTGTATCAGTGTTCTATCAGAATGCAGAAAGTGTTCAGTTTCTGTAGTCTGTAGCAAGTTATTTTTATTATCGTGAAGTACTTTACTGTTTTGATGTTTTATGTTGAACTTGGTTTATCTTTGTATTAGTTTTGGTGTTGTACTTTGTTTTCAAGACTGTGTTAGTACTGTTTTCTGTATAAGTTTGGCTGATTATTAAATTAGTAGAACACACTACTTGGTGTTCTATCACTTTCAAAAGTAACGATTTGGCCCCTATACTTTAAAAATGGTAACAATTAGTCCTTTTGTTCAATTTTATGTTAACTTGCCGTCAAATCCCTCCTTTGAAGGCTAATTTCTCTTCTTGGTAGAACACCACAGTTCAAGGGAAGTGGGAAGGTTACCATTTTATAGGGATTCTTAGGGCTCTAAAAGGAAGTCTTAGAGTGTGAAATAGAGGAGTCTTTGTAGACATCAAGAACAAAAAGAAAGAGATCCTTGCTAGGAAGGAGAGAGGGATGGTCTAATGGAGATTTTGCATCAGAAAAGAGAGCATTAGTTGGGGTCAAAAAGCTAAAGTTAGATGGGTTAAGGTAGGGGACTATAACACTGGCTTTTTCCATAGAATGGCTAGTGGTAGAAGGAACAAGAACTGCATCGGCCCTTTGATTTTGGAGTGGGTAGCGCACTAGAGATGACATAGAGGTTGAGGAAGAATTTCTTTTGGCCTTTTCAGGTGAAAACCGTTTGTACAAGGCATTGATTGATGCTCCATTTCAAGTAGGAAGGATGAGGAGCTTGTGGTTCCTTTTACCTTGGAGGAAATCAGGAAGGCAGTCTGTGGGCGTGATGAGTCCAAACGGTTTTTCCATGTCTTTTTTTCAAGATAATCAGGATCTTATTAAGGGTGATTGGGGGAGGGGGGTTGAAGAGTTTTTTGTGGGGTATCTTGAACCAAACTATGGTGGAAACTTTCGTGTGTCTTATTCCTAAGAAGGAGCATGCCAATAGGGTGAGTTTTATAACAAGTGTCTCTAAGATTCTGGCCAAGGTTCTTGCTAATTGCTTAAGGAAAGTGATGCCCTCAACTATTTCTGAGATGAAGAAGTCCTTCCTTGCGGGGAGGCAAACTGTGGATCATGCTCTTATAGCCAATGAAGCCATTGAGAACTGTTGAGCGAATAAGGAGGTGGGTAAGGTTTTTAAACTTGACTCTGAAAAAGCTTATGATCTCGCACGTTGATTGGGAGTTTTAGGATAAGGCGGTGATGAAGAAAGGCTTTGGGTATAAACGGAGGTTGTGGTTGTGGAGTTGGATTAGGAATGTTAGGGCCTTTAGGGTTTAGGAAATTTGGATTCTATTTTATGTTTTTAGATTCTCTGAGTTCAACAAATATTCGTTTGGCAGATTAATTTGCAATTTATCCAATTTTTAAATATAAGTTATGTTCATAAATAAATTAATAATAGCTGATTGTCAACTAAATCATAGTGGATAAGTAAGGACTGGTTTTATGATTTATAAATATCCAGTATCAAATTAGAATTCAATTTCAGAATGTGTCACCAAACACATATATGAAAAACATAAAATACAACTCAGCTTACATAGAATCTCTTGTTTTCAAATTTTGGTTTTCAGATTCTCTACTAAACATGCCCTGAATTACTCAATTCTCATCAGTGGAGTCTCAAAGGGATGGATTCAGGCATCTACAGGTCTAAAACATGGAGATCCTCTGCCTCCCTTTTTGTTCTTACTCGTTGTGGATGGCTTAAGTCGACTCATTATAAAGGGGTGGAAGGAAACATTTTCAAACCATTTAGGTTTGGTACAAATGAGGTTGCCTTGTCACATCTTCAGTTTGTTGACAATACGAGGTTCTGGTTTGACAATGAGGAGTCCTTAAACCTTAATCACATGGTGGGTTTTTCTTAGGACATATCAGGTTTAAAGATTAATGGGAGTAAGTGTCAAATCTTGGGGATTAATTGTGATCAGGATAAGCTTAGGAGATGGGCAAATGTGATTGTTGTGGTTGGTTCTTTTCCTTCATCTTACCTTAGGCTCCTGCTGGGAGGTAATTCAAGAGCTGTATCTTTTTGGGACCCTATTTCTGAAAAGATTTGTTAAAGATTAGCTTTGTGGAAGAAAGGTTTTCTCTCCAAAGTTGGGAGGCTAACTTCGATCAGATCGGTTTCAAGTGGCATTCCTGAATATTATCTCTCCTTGTTTTGGGCTCCTATTTGGTTTGTAAGAGCTTGGAGAAGTTGATAAGAGATTCTTTTCGGGAAAGAATGATGAAGGAAAGGACTCTCATCTGACGGTTGGGAGATAGTTGGTCGGCTCGTTAACTAGGGGGTCGGAGATTGCCAATTTAAGCGTTCATAATAAAGCTCTGTTTGTGAAGTGGCTATGGCCTTTTGCCTTGAGCCTGAATCCTTTTGGCATCGGATCATTGCAAGTAAGTGTGGTAACCATCCTTTGATCAGGTAGCAAAAGGAGTTAAAGACACATATCGAAATTTTTGGAAAGATATTTTGTTTGGATTTCCTACTTTTATCTAGTTCGTATATTGTGGTGGATGGTAAGGAAATGTTTTTCTGGGAAGATCAATGGGTGGGGGATAGTTTGCTTTACCTTTCTCTATATTATTTATTTATCTTACTCTAAAAATTGGTCGGGTTTTGTACTCCTGGTTTGATCGGGGAACTCTGTCTTTTTCTTTTGGGTTCTGTTGTCATTCATCCAAATGGGAAACAAAAGAGGTGGCATATTTCTTCTTTCTTTATTGGATGAGTGCAATTTTGGGGTTGGTAGGAGGGATATTCGTATTTGGAGCCCTAAGCCTAGTGTAGGATTCTCTTGTAAATTTTTCTTTAGGTTGTTGCTGGATAGATCCCTCTCTTGCAAGGGAATTGACTTTTGATGTGGTTTGGAGGATTAAGATATCTAAGAAAATTAGGTTCTTCACTTGGCAAGTTTTTCTCGTTCAGGTGAACACTAGACATGCTTGCTAGGAAGATGACTTCGCTAATGAGTCCTTTCTGTTGTTTCTTTTTCAGAAGGGGGAGGAAAACCTAGATCATCTCCTTTAGGACCGTTCGGGCGGTGTGGAGCTGGTTTTTGTAGGAGTTTGATGTCAAGATTTTTGGCCAAAGGGACTATCATGTGATGATCAGGAAGTTCCTCATCCATTCGCCTTCTAGAGAGAGGTCATTTCTGTGGTTTGCGGGGTTCTGTGCGATGTTAAGCGATATTTGGGGGAGAAGAACGATGGAATGTTTAGAGGTATGGATAGGGATCCTTGTGAGGTGTGGTCCTTATTGAGGTTTCATGTGTCGCTTTGGGCTTCAGTATCAAAGCTTTTTTGTAATTGTCCCTTAATAACATTTTACCTAGTTGGAATTCCTTCCTTTAGAATGAGTGTTTTGGTGGACTTGTTTTTCGTATGCCCTTGTATTTGTATTCTTTCATTTTTTTCTCAATGAAAATTGTTGATTCTATTAAAAAAAAATGATGGGAGATCTATTTTAATCATGTAATCCAGCTGTTTTTGGAATTCTTGGTCTCAAACTGGTCTTCTTGGATTTCTTGAATGAAGTTCATGAACCATCTATTCTTCTTTGGATGAATCCGAGTCATCTACCATAAAACCAGGTAAATAAACGTCATGTAATTTCTTGTGCCATCTTTCTTGATCATGAACTTGAGGTACATTGGATCTTTTCTCGATGAAGCTCTTGGGATTACTTGGCTAGTGGCTATGAATGTTGAGAATTGTTGAGTGAAATGTTCAATGGCCCTAGTGAGAGTGGAAGTGTGTTTTTTGATGTTGACTTTAACAAGTTCTACATCATTTAGTCGGCCCTCAACATTGGATGAAGCTTTTGCAACCATAGTGTTTGAAGGAAAGGGATCCAATTTGAAAACAATTTTTTCAGCCTTGGATCGGAGGCTCCGATACCACTTGGCGCTCACAAGTGAAGAACCTCAAAATTTTATTATATCTTGTTTTAAAATAAGAGGAAAAGTAGGCTTGGGCTCTAGTGACCTGTTTAGAAGGTTATTTTTGTGGGAGACCTAAATAACTGGTTGTTTAAAACAAGAATTACAAGATTATGAGATGGCTATCCACACCTCACATGTTCTAAACTTTTGTTAGATTTAATATTGCTTTGATAGTGTTAATTTTTTTACACCTACCCTTTAAATTTCAAATTTGTTTTTAGTTTCCTTAATTAATTGAACGTAGAGGTGGCTATGGAAAGTTGGTTCAGAAAGAGTTGGAAGCACAGAGGCAGCTTGTGGATTATGGTACTGGTTCACTAGGCTCTATGGCACCAGTTATGCCTCAGTGTAAGTTGCTTTGAGGAATGCTATGTATAGATATTGTGTATACACATTATTGATTTGATGTGCCATTCATGTTTTTCTTTTTCTCTTGCAGATGGAAAACATGGTGGAAGCCATGGACATGGGAATCGTCATGGTAGAGGTATCAAATTTCTAAAGCATTTTCGAATCATCTATGTATGGGAGTTTATTTGCATTCTTGCAGTTTCCTGATATTAATCGGAATACAATACTGTTGTTTGAAAAACTAGATTACCATCATCGTAAGCGCTACCGAGATGACGATCGCCATGCCCATGAAAGCTCTAAGAGAACTTCAGATTACGAGTCTAGAAGAAACTCCAATTATGAATCGAGACCGGTAATTTCAAAATGATTCTTTCCTTGGGACATGTTTGAGAGTAATTGTAGAAATATGACTTTTAGTGAAGAGATTTGTTGAAATTAGTTTTTGTAGGGCCATTTTAACATTTGATTCTACACTTTTCAATGGAGATACAACCAAGAGTGATTTTGAATGAATTAATATTTGAAATAGAAGTATGTAGTGCATGTTTCAGAGTAATTTTGAAATTGTTAAAATAACTTTTTGTTATTTTCTTAATCACCTCGAAATATGCTTTTAATCACCTAAAATTAATTTAATTGAAAATTTTTAACTTTTAAATTTAATTGTCACATCAAAATTGGTTTAGAGGTATTTTGAAAATGGCCAGTGGTTTTAACCATTTCAGAATCACACTTGAACAGGCCCTTAGTCATTCCAAAATCGTATCAAACATGTGCTTAGTCATCTGTGTGTTGAAATTTTCACGAGAGGTACTGGATGCTTTCATGCCGTACCTAGTTGCACATTAATCTGGATGTAATTAACGATGACTGTGGTAGTTTGTTTGGTCTGTGGGCTTTCGTTGTCCTTATAAAGTATTCTCTCTTAAAAGAAAGTTATAAAAACTTGTCACCAGCTATTAGAACCATTATCCTGTATACTGCTTTTTTTTTGTGTGTGGTTTTGGATGTATATATTGCCATGCTTCAGTATTTTACAAATTGGACTGTTACAGGAGAAGAATCCAAGATTCCGTGAGAGTGGTGATTCTGATGAAGAGGATGACGACGACCGTAAGCAGCGACACTAACCTTAGTGGTGTTTTCATATCAATCATAATGTGAGGAATCATTTACATTGGTGTTTGTAGTTCTGGAGATAGTGATAAAGGACAATTTCGTTACTTGTAGATGTAAAAACTAACGAGTTATTTTTTTTTTCATGCCACTAGGTACTTTGTGCTTTCCTTAATGAAGGAATGACTATAAATGGCTGTTTACCGTTTATTTTTATAAGAATCAAGTAGGCGTTTTGTCGGAACTATGATGAGAAAAATGAAGAATTCAATTCTCTTCTAAGTACTTTTAAGGAAGTGTGTAGCATTCGGTTGCTTGACAAGGATGCTGGTTGGAAGGAATGGTGTTGGTATGTAAGAAGGTGAAATTTATGGAGTGATTTCCTGTGGTTATCACCAATTGGAGGATGGTCTGGGAAGTCTTTATTGAATGAAATCATGTGCATGGTACAATAATATTGATCCATCAACCCTCGCAAGATTTGGAAATGCTTTCAAATTTGATTGAATTTTGAACTGTGGGATTGAAAAAGGTAAAGAACAACTTGAAGGCAACAGATAAAAGGTCCAACAAACACCGCATTTTTATAGCAGAGGAGACCCACGAAGGTAAAACACAATCTGCATTCAGTTTTTCTCCTTCAGAAGCAGAAGGATAACAACCCGCAAATTCAAATAAAAGATCAATTAATTTGATGTAGTAGAAAAATGACGTTGAATTGTCAACCCTATATTTCGAGATTGTTATGTGGTGAAATAAGTTTGAGGGTTTGGAAAATGGTTAGTTAAACTTTGTAGCTGTAGATGAAGGGTGTCCAGTCAACTGTTGGCAGACCATCTCCCCTTCTACAGGACAAAGTTACCTGGTGGACTGGTGACTGGTCAGAGAGAGGAATTCAAAGGAAAAAAAAGAAGTTAAATTACACAAAACTAACTCTTCCGCGTAAAGTCACTGTCTACGAGGGTTCCTCACATGGCTTTACTCCTTGAACTTGGTAGTTGGGTATCTAGAATTAACATAACTTTTTACAAAGTTTAAATTTTAGTTAGTCAATGTCTCGATCATAAGCTTTATACATAATAAATCACGATATCTCTACCGTCTGTCTAATATGTAATGCCATATATATATATATAATTATTGGTAACAAAATTGAAACTTTAAGGTTCAGTTAGAAACAATTTTTTTTTTT

mRNA sequence

ATGGCTTCGTTGTTCAAGGACCCAACAAAGCTATCAATTTATCGGGATAGAAGATTTCATGGATCACAAGATGAATTTGAAGTGGCACTTCAGACTTCAACCACTGTTTATGTGGGAAATATGTCCTTCTATACGACAGAGGAGCAAGTATATGAGCTTTTTTCTCGAGCTGGAGAAATTAAGAAGATAATCATGGGTTTGGATAAGAATTCAAAAACGCCTTGTGGCTTTTGTTTTGTCCTATACTATTCTCGGGAGGATACCGAGGATGCTGTAAAATATATAAGTGGAACAATTCTTGATGATCGTCCCATCCGTGTGGATTTTGATTGGGGATTTCAGGATGGCAGGCAATGGGGCCGTGGTCGAAGTGGTGGACAGGTGCGTGATGAATATCGAACAGACTATGATCCTGGTAGAGGTGGCTATGGAAAGTTGGTTCAGAAAGAGTTGGAAGCACAGAGGCAGCTTGTGGATTATGGTACTGGTTCACTAGGCTCTATGGCACCAGTTATGCCTCAGTATGGAAAACATGGTGGAAGCCATGGACATGGGAATCGTCATGGTAGAGATTACCATCATCGTAAGCGCTACCGAGATGACGATCGCCATGCCCATGAAAGCTCTAAGAGAACTTCAGATTACGAGTCTAGAAGAAACTCCAATTATGAATCGAGACCGGAGAAGAATCCAAGATTCCGTGAGAGTGGTGATTCTGATGAAGAGGATGACGACGACCGTAAGCAGCGACACTAA

Coding sequence (CDS)

ATGGCTTCGTTGTTCAAGGACCCAACAAAGCTATCAATTTATCGGGATAGAAGATTTCATGGATCACAAGATGAATTTGAAGTGGCACTTCAGACTTCAACCACTGTTTATGTGGGAAATATGTCCTTCTATACGACAGAGGAGCAAGTATATGAGCTTTTTTCTCGAGCTGGAGAAATTAAGAAGATAATCATGGGTTTGGATAAGAATTCAAAAACGCCTTGTGGCTTTTGTTTTGTCCTATACTATTCTCGGGAGGATACCGAGGATGCTGTAAAATATATAAGTGGAACAATTCTTGATGATCGTCCCATCCGTGTGGATTTTGATTGGGGATTTCAGGATGGCAGGCAATGGGGCCGTGGTCGAAGTGGTGGACAGGTGCGTGATGAATATCGAACAGACTATGATCCTGGTAGAGGTGGCTATGGAAAGTTGGTTCAGAAAGAGTTGGAAGCACAGAGGCAGCTTGTGGATTATGGTACTGGTTCACTAGGCTCTATGGCACCAGTTATGCCTCAGTATGGAAAACATGGTGGAAGCCATGGACATGGGAATCGTCATGGTAGAGATTACCATCATCGTAAGCGCTACCGAGATGACGATCGCCATGCCCATGAAAGCTCTAAGAGAACTTCAGATTACGAGTCTAGAAGAAACTCCAATTATGAATCGAGACCGGAGAAGAATCCAAGATTCCGTGAGAGTGGTGATTCTGATGAAGAGGATGACGACGACCGTAAGCAGCGACACTAA

Protein sequence

MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGGSHGHGNRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSDEEDDDDRKQRH*

Homology

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BLAST of CsaV3_4G010150 vs. NCBI nr
Match: XP_004137136.1 (nuclear cap-binding protein subunit 2 [Cucumis sativus] >XP_031739893.1 nuclear cap-binding protein subunit 2 [Cucumis sativus] >KAE8649330.1 hypothetical protein Csa_015022 [Cucumis sativus])

HSP 1 Score: 506.5 bits (1303), Expect = 1.3e-139
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0


Query: 1   MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI 60
           MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI
Sbjct: 1   MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI 60

Query: 61  KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 120
           KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG
Sbjct: 61  KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 120

Query: 121 RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGG 180
           RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGG
Sbjct: 121 RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGG 180

Query: 181 SHGHGNRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSD 240
           SHGHGNRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSD
Sbjct: 181 SHGHGNRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSD 240

Query: 241 EEDDDDRKQRH 252
           EEDDDDRKQRH
Sbjct: 241 EEDDDDRKQRH 251

[Close]

BLAST of CsaV3_4G010150 vs. NCBI nr
Match: XP_008464581.1 (PREDICTED: nuclear cap-binding protein subunit 2 [Cucumis melo])

HSP 1 Score: 501.1 bits (1289), Expect = 5.5e-138
Identity = 248/251 (98.80%), Postives = 250/251 (99.60%), Query Frame = 0


Query: 1   MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI 60
           MASLFKDPTKLS+YRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI
Sbjct: 1   MASLFKDPTKLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI 60

Query: 61  KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 120
           KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG
Sbjct: 61  KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 120

Query: 121 RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGG 180
           RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVM QYGKHGG
Sbjct: 121 RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMTQYGKHGG 180

Query: 181 SHGHGNRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSD 240
           SHGHG+RHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSD
Sbjct: 181 SHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSD 240

Query: 241 EEDDDDRKQRH 252
           EEDDDDRKQRH
Sbjct: 241 EEDDDDRKQRH 251

[Close]

BLAST of CsaV3_4G010150 vs. NCBI nr
Match: XP_038900343.1 (nuclear cap-binding protein subunit 2 [Benincasa hispida] >XP_038900344.1 nuclear cap-binding protein subunit 2 [Benincasa hispida])

HSP 1 Score: 482.3 bits (1240), Expect = 2.6e-132
Identity = 240/250 (96.00%), Postives = 247/250 (98.80%), Query Frame = 0


Query: 1   MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI 60
           MASLFKDPTKLS+YRDRRFHG+QDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI
Sbjct: 1   MASLFKDPTKLSVYRDRRFHGTQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI 60

Query: 61  KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 120
           KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG
Sbjct: 61  KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 120

Query: 121 RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGG 180
           RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSM PVM QYGKHGG
Sbjct: 121 RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSM-PVMTQYGKHGG 180

Query: 181 SHGHGNRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSD 240
           SHGHG+RHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRN +++SRPEKNPRFRESGDSD
Sbjct: 181 SHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHDSRPEKNPRFRESGDSD 240

Query: 241 EEDDDDRKQR 251
           EEDDDD+KQR
Sbjct: 241 EEDDDDQKQR 249

[Close]

BLAST of CsaV3_4G010150 vs. NCBI nr
Match: KAG6570919.1 (Nuclear cap-binding protein subunit 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 474.6 bits (1220), Expect = 5.5e-130
Identity = 234/251 (93.23%), Postives = 245/251 (97.61%), Query Frame = 0


Query: 1   MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI 60
           MASLFKDP+KLS+YRDRRF G+QDEFE+ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI
Sbjct: 1   MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI 60

Query: 61  KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 120
           KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIR DFDWGFQDGRQWG
Sbjct: 61  KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRADFDWGFQDGRQWG 120

Query: 121 RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGG 180
           RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSM  V+PQYGKHGG
Sbjct: 121 RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVVPQYGKHGG 180

Query: 181 SHGHGNRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSD 240
           SHG+G RHGRDYH+RKRYRDDDRHAHESSKRTSDY+SRRN ++ESRP+KNPRFRESGDSD
Sbjct: 181 SHGNGPRHGRDYHNRKRYRDDDRHAHESSKRTSDYDSRRNPDHESRPQKNPRFRESGDSD 240

Query: 241 EEDDDDRKQRH 252
           EEDDDDRKQRH
Sbjct: 241 EEDDDDRKQRH 251

[Close]

BLAST of CsaV3_4G010150 vs. NCBI nr
Match: XP_022986365.1 (nuclear cap-binding protein subunit 2-like isoform X1 [Cucurbita maxima] >XP_022986366.1 nuclear cap-binding protein subunit 2-like isoform X1 [Cucurbita maxima] >XP_022986367.1 nuclear cap-binding protein subunit 2-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 474.2 bits (1219), Expect = 7.2e-130
Identity = 233/251 (92.83%), Postives = 245/251 (97.61%), Query Frame = 0


Query: 1   MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI 60
           MASLFKDP+KLS+YRDRRF G+QDEFE+ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI
Sbjct: 1   MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI 60

Query: 61  KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 120
           KKIIMGLDKNSKTPCGFCF LYYSREDTEDAVKYISGTILDDRPIR DFDWGFQDGRQWG
Sbjct: 61  KKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTILDDRPIRADFDWGFQDGRQWG 120

Query: 121 RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGG 180
           RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSM  V+PQYGKHGG
Sbjct: 121 RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVIPQYGKHGG 180

Query: 181 SHGHGNRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSD 240
           SHG+G+RHGRDYH+RKRYRDDDRHAHESSKRTSDY+SRRN ++ESRP+KNPRFRESGDSD
Sbjct: 181 SHGNGHRHGRDYHNRKRYRDDDRHAHESSKRTSDYDSRRNPDHESRPQKNPRFRESGDSD 240

Query: 241 EEDDDDRKQRH 252
           EEDDDDRKQRH
Sbjct: 241 EEDDDDRKQRH 251

[Close]

BLAST of CsaV3_4G010150 vs. ExPASy Swiss-Prot
Match: Q9XFD1 (Nuclear cap-binding protein subunit 2 OS=Arabidopsis thaliana OX=3702 GN=CBP20 PE=1 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 9.8e-106
Identity = 196/256 (76.56%), Postives = 226/256 (88.28%), Query Frame = 0


Query: 1   MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI 60
           MASLFK+  KLS YRDRRF G+Q+EF+ AL+ STTVY+GN+SFYTTEEQ+YELFSRAGEI
Sbjct: 1   MASLFKEQAKLSAYRDRRFSGTQEEFDEALRASTTVYIGNVSFYTTEEQLYELFSRAGEI 60

Query: 61  KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 120
           KKIIMGLDKN+KTPCGFCFVL+YSREDTEDAVKYISGTILDDRPIRVDFDWGFQ+GRQWG
Sbjct: 61  KKIIMGLDKNTKTPCGFCFVLFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQEGRQWG 120

Query: 121 RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMP-QYG--- 180
           RGRSGGQVRDEYRTDYDP RGGYGKLVQKELEAQRQLVDYGTGSLG+     P  YG   
Sbjct: 121 RGRSGGQVRDEYRTDYDPARGGYGKLVQKELEAQRQLVDYGTGSLGAYPQAAPTNYGNGR 180

Query: 181 KHGGSHGHG--NRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFR 240
           + GG++G G  NRHGR  +HRKR RDDDR+  ++S+R +D+ESRR+++ + RPEKNPRFR
Sbjct: 181 RGGGNYGQGGQNRHGRGDYHRKRQRDDDRYGRDNSRRNTDHESRRDTDSDMRPEKNPRFR 240

Query: 241 ESGDSDEEDDDDRKQR 251
           ESGDSD++ +DDRK+R
Sbjct: 241 ESGDSDDDGEDDRKRR 256

[Close]

BLAST of CsaV3_4G010150 vs. ExPASy Swiss-Prot
Match: Q84L14 (Nuclear cap-binding protein subunit 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CBP20 PE=2 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 1.7e-94
Identity = 188/252 (74.60%), Postives = 210/252 (83.33%), Query Frame = 0


Query: 1   MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI 60
           MASLFKDPTKLS YRDRRF G+Q+E+E ALQ S TVYVGNMSFYTTEEQ YELFSRAGEI
Sbjct: 1   MASLFKDPTKLSAYRDRRFTGTQEEYEAALQASVTVYVGNMSFYTTEEQAYELFSRAGEI 60

Query: 61  KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 120
           +KIIMGLDKNSKTPCGFCF+LYYSRED EDAVKYISGT+LDDRPIRVDFDWGF++GRQWG
Sbjct: 61  RKIIMGLDKNSKTPCGFCFILYYSREDAEDAVKYISGTMLDDRPIRVDFDWGFEEGRQWG 120

Query: 121 RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGG 180
           RGRSGGQVRDEYRTDYDPGRGGYGK+VQKELEAQR+LVDYG G+    AP  PQY +   
Sbjct: 121 RGRSGGQVRDEYRTDYDPGRGGYGKMVQKELEAQRELVDYG-GAFQPNAP--PQYDRGDR 180

Query: 181 SHGHGN--RHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGD 240
             G+G+  R+ RDY  RKRYR+D+R    SS+R  D E +R++      EKNPRFRE GD
Sbjct: 181 KRGYGDSYRNDRDY-QRKRYRNDER----SSQRAPDSEFKRDA---IDSEKNPRFREKGD 240

Query: 241 SDEEDDDDRKQR 251
           SDEEDDD  K+R
Sbjct: 241 SDEEDDDYDKRR 241

[Close]

BLAST of CsaV3_4G010150 vs. ExPASy Swiss-Prot
Match: B7P877 (Nuclear cap-binding protein subunit 2 OS=Ixodes scapularis OX=6945 GN=Cbp20 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 8.7e-54
Identity = 97/141 (68.79%), Postives = 120/141 (85.11%), Query Frame = 0


Query: 11  LSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKN 70
           LS YRD+ F GS+ E E  L+ STT+YVGNMSFYTTEEQ+YELFS+ G++KK+IMGLD+ 
Sbjct: 5   LSSYRDQHFKGSRSEQERLLRLSTTLYVGNMSFYTTEEQIYELFSKCGDVKKVIMGLDRF 64

Query: 71  SKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVRD 130
            KTPCGFCFV YY+RED E+A++Y++GT LDDR IR D+D GF +GRQ+GRG+SGGQVRD
Sbjct: 65  HKTPCGFCFVEYYTREDAENAIRYVNGTKLDDRIIRTDWDAGFVEGRQFGRGKSGGQVRD 124

Query: 131 EYRTDYDPGRGGYGKLVQKEL 152
           EYRTDYD GRGGYGKL+ + +
Sbjct: 125 EYRTDYDSGRGGYGKLMAQRV 145

[Close]

BLAST of CsaV3_4G010150 vs. ExPASy Swiss-Prot
Match: Q9CQ49 (Nuclear cap-binding protein subunit 2 OS=Mus musculus OX=10090 GN=Ncbp2 PE=1 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.9e-53
Identity = 99/141 (70.21%), Postives = 118/141 (83.69%), Query Frame = 0


Query: 10  KLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDK 69
           +LS YRD+ F G  +E E  L+ S T+YVGN+SFYTTEEQ+YELFS++G+IKKIIMGLDK
Sbjct: 16  ELSEYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDK 75

Query: 70  NSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 129
             KT CGFCFV YYSR D E+A++YI+GT LDDR IR D+D GF++GRQ+GRGRSGGQVR
Sbjct: 76  MKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDAGFKEGRQYGRGRSGGQVR 135

Query: 130 DEYRTDYDPGRGGYGKLVQKE 151
           DEYR DYD GRGGYGKL QK+
Sbjct: 136 DEYREDYDAGRGGYGKLAQKQ 156

[Close]

BLAST of CsaV3_4G010150 vs. ExPASy Swiss-Prot
Match: B1WC40 (Nuclear cap-binding protein subunit 2 OS=Rattus norvegicus OX=10116 GN=Ncbp2 PE=1 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.9e-53
Identity = 99/141 (70.21%), Postives = 118/141 (83.69%), Query Frame = 0


Query: 10  KLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDK 69
           +LS YRD+ F G  +E E  L+ S T+YVGN+SFYTTEEQ+YELFS++G+IKKIIMGLDK
Sbjct: 16  ELSEYRDQHFRGDNEEQEKLLKKSCTLYVGNLSFYTTEEQIYELFSKSGDIKKIIMGLDK 75

Query: 70  NSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVR 129
             KT CGFCFV YYSR D E+A++YI+GT LDDR IR D+D GF++GRQ+GRGRSGGQVR
Sbjct: 76  MKKTACGFCFVEYYSRADAENAMRYINGTRLDDRIIRTDWDAGFKEGRQYGRGRSGGQVR 135

Query: 130 DEYRTDYDPGRGGYGKLVQKE 151
           DEYR DYD GRGGYGKL QK+
Sbjct: 136 DEYREDYDAGRGGYGKLAQKQ 156

[Close]

BLAST of CsaV3_4G010150 vs. ExPASy TrEMBL
Match: A0A1S3CLT9 (Nuclear cap-binding protein subunit 2 OS=Cucumis melo OX=3656 GN=LOC103502423 PE=3 SV=1)

HSP 1 Score: 501.1 bits (1289), Expect = 2.6e-138
Identity = 248/251 (98.80%), Postives = 250/251 (99.60%), Query Frame = 0


Query: 1   MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI 60
           MASLFKDPTKLS+YRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI
Sbjct: 1   MASLFKDPTKLSVYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI 60

Query: 61  KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 120
           KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG
Sbjct: 61  KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 120

Query: 121 RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGG 180
           RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVM QYGKHGG
Sbjct: 121 RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMTQYGKHGG 180

Query: 181 SHGHGNRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSD 240
           SHGHG+RHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSD
Sbjct: 181 SHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSD 240

Query: 241 EEDDDDRKQRH 252
           EEDDDDRKQRH
Sbjct: 241 EEDDDDRKQRH 251

[Close]

BLAST of CsaV3_4G010150 vs. ExPASy TrEMBL
Match: A0A0A0KVX7 (Nuclear cap-binding protein subunit 2 OS=Cucumis sativus OX=3659 GN=Csa_4G129020 PE=3 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 1.5e-136
Identity = 249/257 (96.89%), Postives = 249/257 (96.89%), Query Frame = 0


Query: 1   MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI 60
           MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI
Sbjct: 1   MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI 60

Query: 61  KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 120
           KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG
Sbjct: 61  KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 120

Query: 121 RGRSGGQVRDEYRTDYDPG------RGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQ 180
           RGRSGGQVRDEYRTDYDP        GGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQ
Sbjct: 121 RGRSGGQVRDEYRTDYDPDILFSFQEGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQ 180

Query: 181 YGKHGGSHGHGNRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFR 240
           YGKHGGSHGHGNRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFR
Sbjct: 181 YGKHGGSHGHGNRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFR 240

Query: 241 ESGDSDEEDDDDRKQRH 252
           ESGDSDEEDDDDRKQRH
Sbjct: 241 ESGDSDEEDDDDRKQRH 257

[Close]

BLAST of CsaV3_4G010150 vs. ExPASy TrEMBL
Match: A0A6J1J7C7 (Nuclear cap-binding protein subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC111484127 PE=3 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 3.5e-130
Identity = 233/251 (92.83%), Postives = 245/251 (97.61%), Query Frame = 0


Query: 1   MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI 60
           MASLFKDP+KLS+YRDRRF G+QDEFE+ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI
Sbjct: 1   MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI 60

Query: 61  KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 120
           KKIIMGLDKNSKTPCGFCF LYYSREDTEDAVKYISGTILDDRPIR DFDWGFQDGRQWG
Sbjct: 61  KKIIMGLDKNSKTPCGFCFALYYSREDTEDAVKYISGTILDDRPIRADFDWGFQDGRQWG 120

Query: 121 RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGG 180
           RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSM  V+PQYGKHGG
Sbjct: 121 RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMPSVIPQYGKHGG 180

Query: 181 SHGHGNRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSD 240
           SHG+G+RHGRDYH+RKRYRDDDRHAHESSKRTSDY+SRRN ++ESRP+KNPRFRESGDSD
Sbjct: 181 SHGNGHRHGRDYHNRKRYRDDDRHAHESSKRTSDYDSRRNPDHESRPQKNPRFRESGDSD 240

Query: 241 EEDDDDRKQRH 252
           EEDDDDRKQRH
Sbjct: 241 EEDDDDRKQRH 251

[Close]

BLAST of CsaV3_4G010150 vs. ExPASy TrEMBL
Match: A0A6J1FX36 (Nuclear cap-binding protein subunit 2 OS=Cucurbita moschata OX=3662 GN=LOC111448282 PE=3 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 7.7e-130
Identity = 233/251 (92.83%), Postives = 245/251 (97.61%), Query Frame = 0


Query: 1   MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI 60
           MASLFKDP+KLS+YRDRRF G+QDEFE+ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI
Sbjct: 1   MASLFKDPSKLSVYRDRRFQGTQDEFELALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI 60

Query: 61  KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 120
           KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIR DFDWGFQDGRQWG
Sbjct: 61  KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRADFDWGFQDGRQWG 120

Query: 121 RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGG 180
           RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGS+  V+PQYGKHGG
Sbjct: 121 RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSVPSVIPQYGKHGG 180

Query: 181 SHGHGNRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSD 240
           SHG+G RHGRDYH+RKRYRDDDRHAHESSKRTSDY+SRRN ++ESRP+KNPRFRESGDSD
Sbjct: 181 SHGNGPRHGRDYHNRKRYRDDDRHAHESSKRTSDYDSRRNPDHESRPQKNPRFRESGDSD 240

Query: 241 EEDDDDRKQRH 252
           EEDDDDRKQRH
Sbjct: 241 EEDDDDRKQRH 251

[Close]

BLAST of CsaV3_4G010150 vs. ExPASy TrEMBL
Match: A0A6J1G5C4 (Nuclear cap-binding protein subunit 2 OS=Cucurbita moschata OX=3662 GN=LOC111451051 PE=3 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 1.7e-129
Identity = 234/251 (93.23%), Postives = 243/251 (96.81%), Query Frame = 0


Query: 1   MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI 60
           MASLFKDP+KLS+YRDRRF G+QDEFE AL +STTVYVGNMSFYTTEEQVYELFSRAGEI
Sbjct: 1   MASLFKDPSKLSVYRDRRFQGTQDEFEHALLSSTTVYVGNMSFYTTEEQVYELFSRAGEI 60

Query: 61  KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 120
           KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVK+ISGTILDDRPIRVDFDWGFQDGRQWG
Sbjct: 61  KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVDFDWGFQDGRQWG 120

Query: 121 RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMPQYGKHGG 180
           RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGT SLGSM PVM Q+G HGG
Sbjct: 121 RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTDSLGSMPPVMSQHGNHGG 180

Query: 181 SHGHGNRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFRESGDSD 240
           SHGHG RHGRDYHHRKR+RDDDRHAHESSKRTSD+ESRRNSN+ESRPEKNPRFRESGDSD
Sbjct: 181 SHGHGYRHGRDYHHRKRHRDDDRHAHESSKRTSDFESRRNSNHESRPEKNPRFRESGDSD 240

Query: 241 EEDDDDRKQRH 252
           EEDDDDRKQRH
Sbjct: 241 EEDDDDRKQRH 251

[Close]

BLAST of CsaV3_4G010150 vs. TAIR 10
Match: AT5G44200.1 (CAP-binding protein 20 )

HSP 1 Score: 384.4 bits (986), Expect = 6.9e-107
Identity = 196/256 (76.56%), Postives = 226/256 (88.28%), Query Frame = 0


Query: 1   MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI 60
           MASLFK+  KLS YRDRRF G+Q+EF+ AL+ STTVY+GN+SFYTTEEQ+YELFSRAGEI
Sbjct: 1   MASLFKEQAKLSAYRDRRFSGTQEEFDEALRASTTVYIGNVSFYTTEEQLYELFSRAGEI 60

Query: 61  KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 120
           KKIIMGLDKN+KTPCGFCFVL+YSREDTEDAVKYISGTILDDRPIRVDFDWGFQ+GRQWG
Sbjct: 61  KKIIMGLDKNTKTPCGFCFVLFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQEGRQWG 120

Query: 121 RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMP-QYG--- 180
           RGRSGGQVRDEYRTDYDP RGGYGKLVQKELEAQRQLVDYGTGSLG+     P  YG   
Sbjct: 121 RGRSGGQVRDEYRTDYDPARGGYGKLVQKELEAQRQLVDYGTGSLGAYPQAAPTNYGNGR 180

Query: 181 KHGGSHGHG--NRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFR 240
           + GG++G G  NRHGR  +HRKR RDDDR+  ++S+R +D+ESRR+++ + RPEKNPRFR
Sbjct: 181 RGGGNYGQGGQNRHGRGDYHRKRQRDDDRYGRDNSRRNTDHESRRDTDSDMRPEKNPRFR 240

Query: 241 ESGDSDEEDDDDRKQR 251
           ESGDSD++ +DDRK+R
Sbjct: 241 ESGDSDDDGEDDRKRR 256

[Close]

BLAST of CsaV3_4G010150 vs. TAIR 10
Match: AT5G44200.2 (CAP-binding protein 20 )

HSP 1 Score: 384.4 bits (986), Expect = 6.9e-107
Identity = 196/256 (76.56%), Postives = 226/256 (88.28%), Query Frame = 0


Query: 1   MASLFKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEI 60
           MASLFK+  KLS YRDRRF G+Q+EF+ AL+ STTVY+GN+SFYTTEEQ+YELFSRAGEI
Sbjct: 1   MASLFKEQAKLSAYRDRRFSGTQEEFDEALRASTTVYIGNVSFYTTEEQLYELFSRAGEI 60

Query: 61  KKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWG 120
           KKIIMGLDKN+KTPCGFCFVL+YSREDTEDAVKYISGTILDDRPIRVDFDWGFQ+GRQWG
Sbjct: 61  KKIIMGLDKNTKTPCGFCFVLFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQEGRQWG 120

Query: 121 RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMP-QYG--- 180
           RGRSGGQVRDEYRTDYDP RGGYGKLVQKELEAQRQLVDYGTGSLG+     P  YG   
Sbjct: 121 RGRSGGQVRDEYRTDYDPARGGYGKLVQKELEAQRQLVDYGTGSLGAYPQAAPTNYGNGR 180

Query: 181 KHGGSHGHG--NRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFR 240
           + GG++G G  NRHGR  +HRKR RDDDR+  ++S+R +D+ESRR+++ + RPEKNPRFR
Sbjct: 181 RGGGNYGQGGQNRHGRGDYHRKRQRDDDRYGRDNSRRNTDHESRRDTDSDMRPEKNPRFR 240

Query: 241 ESGDSDEEDDDDRKQR 251
           ESGDSD++ +DDRK+R
Sbjct: 241 ESGDSDDDGEDDRKRR 256

[Close]

BLAST of CsaV3_4G010150 vs. TAIR 10
Match: AT3G46020.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 58.5 bits (140), Expect = 8.7e-09
Identity = 28/81 (34.57%), Postives = 49/81 (60.49%), Query Frame = 0


Query: 28  VALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSRED 87
           +A + S  ++V  +S YTT++ + +LFS  G+IK+  +  D  ++ P GF F+ + S +D
Sbjct: 1   MAKRISAQLFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFDSEDD 60

Query: 88  TEDAVKYISGTILDDRPIRVD 109
              A+K + G I+D R I V+
Sbjct: 61  ARKALKSLDGKIVDGRLIFVE 81

[Close]

BLAST of CsaV3_4G010150 vs. TAIR 10
Match: AT1G66260.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 57.8 bits (138), Expect = 1.5e-08
Identity = 26/79 (32.91%), Postives = 46/79 (58.23%), Query Frame = 0


Query: 30  LQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTE 89
           ++  TTVY+ N+    T E + EL++  GE+K+  +  DKN + P G   V+Y  R D  
Sbjct: 103 VEVGTTVYITNLDQGVTNEDIRELYAEIGELKRYAIHYDKNGR-PSGSAEVVYMRRSDAI 162

Query: 90  DAVKYISGTILDDRPIRVD 109
            A++  +  +LD RP++++
Sbjct: 163 QAMRKYNNVLLDGRPMKLE 180

[Close]

BLAST of CsaV3_4G010150 vs. TAIR 10
Match: AT1G66260.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 57.8 bits (138), Expect = 1.5e-08
Identity = 26/79 (32.91%), Postives = 46/79 (58.23%), Query Frame = 0


Query: 30  LQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTE 89
           ++  TTVY+ N+    T E + EL++  GE+K+  +  DKN + P G   V+Y  R D  
Sbjct: 103 VEVGTTVYITNLDQGVTNEDIRELYAEIGELKRYAIHYDKNGR-PSGSAEVVYMRRSDAI 162

Query: 90  DAVKYISGTILDDRPIRVD 109
            A++  +  +LD RP++++
Sbjct: 163 QAMRKYNNVLLDGRPMKLE 180

The following BLAST results are available for this feature:

BLAST of CsaV3_4G010150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137136.1	1.3e-139	100.00	nuclear cap-binding protein subunit 2 [Cucumis sativus] >XP_031739893.1 nuclear ...	[more]
XP_008464581.1	5.5e-138	98.80	PREDICTED: nuclear cap-binding protein subunit 2 [Cucumis melo]	[more]
XP_038900343.1	2.6e-132	96.00	nuclear cap-binding protein subunit 2 [Benincasa hispida] >XP_038900344.1 nuclea...	[more]
KAG6570919.1	5.5e-130	93.23	Nuclear cap-binding protein subunit 2, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_022986365.1	7.2e-130	92.83	nuclear cap-binding protein subunit 2-like isoform X1 [Cucurbita maxima] >XP_022...	[more]

BLAST of CsaV3_4G010150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XFD1	9.8e-106	76.56	Nuclear cap-binding protein subunit 2 OS=Arabidopsis thaliana OX=3702 GN=CBP20 P...	[more]
Q84L14	1.7e-94	74.60	Nuclear cap-binding protein subunit 2 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
B7P877	8.7e-54	68.79	Nuclear cap-binding protein subunit 2 OS=Ixodes scapularis OX=6945 GN=Cbp20 PE=3...	[more]
Q9CQ49	1.9e-53	70.21	Nuclear cap-binding protein subunit 2 OS=Mus musculus OX=10090 GN=Ncbp2 PE=1 SV=...	[more]
B1WC40	1.9e-53	70.21	Nuclear cap-binding protein subunit 2 OS=Rattus norvegicus OX=10116 GN=Ncbp2 PE=...	[more]

BLAST of CsaV3_4G010150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CLT9	2.6e-138	98.80	Nuclear cap-binding protein subunit 2 OS=Cucumis melo OX=3656 GN=LOC103502423 PE...	[more]
A0A0A0KVX7	1.5e-136	96.89	Nuclear cap-binding protein subunit 2 OS=Cucumis sativus OX=3659 GN=Csa_4G129020...	[more]
A0A6J1J7C7	3.5e-130	92.83	Nuclear cap-binding protein subunit 2 OS=Cucurbita maxima OX=3661 GN=LOC11148412...	[more]
A0A6J1FX36	7.7e-130	92.83	Nuclear cap-binding protein subunit 2 OS=Cucurbita moschata OX=3662 GN=LOC111448...	[more]
A0A6J1G5C4	1.7e-129	93.23	Nuclear cap-binding protein subunit 2 OS=Cucurbita moschata OX=3662 GN=LOC111451...	[more]

BLAST of CsaV3_4G010150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G44200.1	6.9e-107	76.56	CAP-binding protein 20	[more]
AT5G44200.2	6.9e-107	76.56	CAP-binding protein 20	[more]
AT3G46020.1	8.7e-09	34.57	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G66260.1	1.5e-08	32.91	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G66260.2	1.5e-08	32.91	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 35..108 e-value: 3.9E-22 score: 89.5
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 36..106 e-value: 2.6E-13 score: 49.6
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 34..112 score: 15.681473
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 6..150 e-value: 8.0E-40 score: 138.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..251
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..251
None	No IPR available	PANTHER	PTHR18847:SF0	NUCLEAR CAP-BINDING PROTEIN SUBUNIT 2	coord: 1..212
IPR027157	Nuclear cap-binding protein subunit 2	PANTHER	PTHR18847	20 KD NUCLEAR CAP BINDING PROTEIN	coord: 1..212
IPR034148	NCBP2, RNA recognition motif	CDD	cd12240	RRM_NCBP2	coord: 36..113 e-value: 7.10112E-52 score: 161.56
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 25..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G010150.1	CsaV3_4G010150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045292	mRNA cis splicing, via spliceosome
cellular_component	GO:0005846	nuclear cap binding complex
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000339	RNA cap binding