CsaV3_4G009170 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAATATGAACACAGAGAAGATGAGGAATGCGAACGCAGAGAAGATGAGGAATGTGAACGACAGAGGAGATGAGATGAGGAATGTGAATGGCATAGAAGATGGGGAATCTAGGGTTGTAGAAGATGAAGAAGTTGGTGGCCGTCGGGGTAGTTTGCCGAATGGATTGTCTATGTTGTTTAATGCCCATCTTGGCTATCATGCCGATAATCCAAACCTGTAG ATGGAGAATATGAACACAGAGAAGATGAGGAATGCGAACGCAGAGAAGATGAGGAATGTGAACGACAGAGGAGATGAGATGAGGAATGTGAATGGCATAGAAGATGGGGAATCTAGGGTTGTAGAAGATGAAGAAGTTGGTGGCCGTCGGGGTAGTTTGCCGAATGGATTGTCTATGTTGTTTAATGCCCATCTTGGCTATCATGCCGATAATCCAAACCTGTAG ATGGAGAATATGAACACAGAGAAGATGAGGAATGCGAACGCAGAGAAGATGAGGAATGTGAACGACAGAGGAGATGAGATGAGGAATGTGAATGGCATAGAAGATGGGGAATCTAGGGTTGTAGAAGATGAAGAAGTTGGTGGCCGTCGGGGTAGTTTGCCGAATGGATTGTCTATGTTGTTTAATGCCCATCTTGGCTATCATGCCGATAATCCAAACCTGTAG MENMNTEKMRNANAEKMRNVNDRGDEMRNVNGIEDGESRVVEDEEVGGRRGSLPNGLSMLFNAHLGYHADNPNL* Homology
BLAST of CsaV3_4G009170 vs. NCBI nr
Match: KGN53678.1 (hypothetical protein Csa_014856 [Cucumis sativus]) HSP 1 Score: 147.9 bits (372), Expect = 3.5e-32 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of CsaV3_4G009170 vs. NCBI nr
Match: XP_004134805.1 (SNF1-related protein kinase regulatory subunit beta-2 [Cucumis sativus] >KGN49035.1 hypothetical protein Csa_003301 [Cucumis sativus]) HSP 1 Score: 57.8 bits (138), Expect = 4.8e-05 Identity = 33/56 (58.93%), Postives = 39/56 (69.64%), Query Frame = 0
BLAST of CsaV3_4G009170 vs. NCBI nr
Match: XP_008440979.1 (PREDICTED: SNF1-related protein kinase regulatory subunit beta-2-like [Cucumis melo] >TYK12453.1 SNF1-related protein kinase regulatory subunit beta-2-like [Cucumis melo var. makuwa]) HSP 1 Score: 55.8 bits (133), Expect = 1.8e-04 Identity = 32/56 (57.14%), Postives = 38/56 (67.86%), Query Frame = 0
BLAST of CsaV3_4G009170 vs. ExPASy TrEMBL
Match: A0A0A0KVT0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G101780 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 1.7e-32 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of CsaV3_4G009170 vs. ExPASy TrEMBL
Match: A0A0A0KH57 (AMPKBI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G511020 PE=3 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 2.3e-05 Identity = 33/56 (58.93%), Postives = 39/56 (69.64%), Query Frame = 0
BLAST of CsaV3_4G009170 vs. ExPASy TrEMBL
Match: A0A5D3CKN6 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00280 PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 8.8e-05 Identity = 32/56 (57.14%), Postives = 38/56 (67.86%), Query Frame = 0
BLAST of CsaV3_4G009170 vs. ExPASy TrEMBL
Match: A0A1S3B352 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucumis melo OX=3656 GN=LOC103485228 PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 8.8e-05 Identity = 32/56 (57.14%), Postives = 38/56 (67.86%), Query Frame = 0
BLAST of CsaV3_4G009170 vs. ExPASy TrEMBL
Match: A0A5A7SHF1 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold253G00670 PE=3 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 9.7e-04 Identity = 31/56 (55.36%), Postives = 37/56 (66.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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