CsaV3_4G008950 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G008950
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4: 6476565 .. 6476938 (-)
RNA-Seq ExpressionCsaV3_4G008950
SyntenyCsaV3_4G008950
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAGTCTCTTCTCACATCTCCTCCCTCTCTTTCATTCCTCTCTTCTCCATTCTCAATCGTCCTCCCTTGTGCCGCATCTTGTCAGATCTCAGTCTCCTCTTTGTCATCCAAAATCTCATCTTCAGTCTTCTTTTGACCCCTATGACCCCTATTCGTCGTCTGAAATCTCATATGTAGTCTTCTTCTGACTCTTCGTCATCTCCACCCTCTTTCGCACCGATTGTTAGATCTCAGTTCGTCGTCTGTCAGATCTCAGTATCCTCCCTCTCCTCGTCATTCATCTCCCTCTTTAGTCTTCTCAGCCATCTGTCTCTTCAGTTTCTGACGACCATTTGACAGTCATCTTCTTCGTCCGACTCTTCAGCATATGA

mRNA sequence

ATGCCAGTCTCTTCTCACATCTCCTCCCTCTCTTTCATTCCTCTCTTCTCCATTCTCAATCGTCCTCCCTTGTGCCGCATCTTGTCAGATCTCAGTCTCCTCTTTTCTTCTTCTGACTCTTCGTCATCTCCACCCTCTTTCGCACCGATTGTTAGATCTCAGTTCGTCGTCTGTCAGATCTCATCTTCTCAGCCATCTGTCTCTTCAGTTTCTGACGACCATTTGACAGTCATCTTCTTCGTCCGACTCTTCAGCATATGA

Coding sequence (CDS)

ATGCCAGTCTCTTCTCACATCTCCTCCCTCTCTTTCATTCCTCTCTTCTCCATTCTCAATCGTCCTCCCTTGTGCCGCATCTTGTCAGATCTCAGTCTCCTCTTTTCTTCTTCTGACTCTTCGTCATCTCCACCCTCTTTCGCACCGATTGTTAGATCTCAGTTCGTCGTCTGTCAGATCTCATCTTCTCAGCCATCTGTCTCTTCAGTTTCTGACGACCATTTGACAGTCATCTTCTTCGTCCGACTCTTCAGCATATGA

Protein sequence

MPVSSHISSLSFIPLFSILNRPPLCRILSDLSLLFSSSDSSSSPPSFAPIVRSQFVVCQISSSQPSVSSVSDDHLTVIFFVRLFSI*
Homology
[Close]
BLAST of CsaV3_4G008950 vs. NCBI nr
Match: KGN53655.1 (hypothetical protein Csa_015129 [Cucumis sativus])

HSP 1 Score: 161.4 bits (407), Expect = 3.5e-36
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0 

Query: 1  MPVSSHISSLSFIPLFSILNRPPLCRILSDLSLLFSSSDSSSSPPSFAPIVRSQFVVCQI 60
          MPVSSHISSLSFIPLFSILNRPPLCRILSDLSLLFSSSDSSSSPPSFAPIVRSQFVVCQI
Sbjct: 1  MPVSSHISSLSFIPLFSILNRPPLCRILSDLSLLFSSSDSSSSPPSFAPIVRSQFVVCQI 60

Query: 61 SSSQPSVSSVSDDHLTVIFFVRLFSI 87
          SSSQPSVSSVSDDHLTVIFFVRLFSI
Sbjct: 61 SSSQPSVSSVSDDHLTVIFFVRLFSI 86

[Close]
BLAST of CsaV3_4G008950 vs. ExPASy TrEMBL
Match: A0A0A0KVM0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G097620 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.7e-36
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0 

Query: 1  MPVSSHISSLSFIPLFSILNRPPLCRILSDLSLLFSSSDSSSSPPSFAPIVRSQFVVCQI 60
          MPVSSHISSLSFIPLFSILNRPPLCRILSDLSLLFSSSDSSSSPPSFAPIVRSQFVVCQI
Sbjct: 1  MPVSSHISSLSFIPLFSILNRPPLCRILSDLSLLFSSSDSSSSPPSFAPIVRSQFVVCQI 60

Query: 61 SSSQPSVSSVSDDHLTVIFFVRLFSI 87
          SSSQPSVSSVSDDHLTVIFFVRLFSI
Sbjct: 61 SSSQPSVSSVSDDHLTVIFFVRLFSI 86

The following BLAST results are available for this feature:
BLAST of CsaV3_4G008950 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN53655.13.5e-36100.00hypothetical protein Csa_015129 [Cucumis sativus][more]
BLAST of CsaV3_4G008950 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_4G008950 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KVM01.7e-36100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G097620 PE=4 SV=1[more]
BLAST of CsaV3_4G008950 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G008950.1CsaV3_4G008950.1mRNA