CsaV3_3G038700 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G038700
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	homeobox-leucine zipper protein HOX11
Location	chr3: 31859666 .. 31862178 (-)
RNA-Seq Expression	CsaV3_3G038700
Synteny	CsaV3_3G038700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGTATTTAAAAAGGGGACCTTCCCCCTTTCTAATTTCCTCTAAAACCCCTTTTCTTCTTCAATCTTGAAAAGAAAAGAGAGAGATTCTTCTGTGAAGTTGGTTTCTAGGATTAATAATGGTGGAGTTGGGTTTGAGCCTTGGTGATCATCCATCTTCCAATTCCAATAGTAATAATAAGAAGAAGCCATTTTCTAATTTTCTGTCTAAACCAATTTCTTCTTCTTCTAATTCTTCTTCCTCTCTTATGGCTTTGGGGTTTTGTGTTGGTTTAATCGGACGTCATTCTGCTTCTGCTTCTGCTTCTGCTTCGGTTCAAGATGATGAAGAAGATGAAGAACAAGATGATGAGGATGATGATGATGATCGGAAAACGGTCGTTCTTGCTGGTTCAACTTCCGGTTTGGATCCACCGGTTCAGCTTGATCTTCTTCCCTTGGCTCCTGTTCCACGTTCTTCTTCTTCTTCTTCTCCCCTCCTTCCTTTTCCATGGCTTTCTCATCACTGTATGTAAATTCCTTTATTTATTATTCTTTGTTTATTTATTTTTTGGGTGTTGGTAAAAATTACAACTTGGGAACTGGATCATTTTATTTTTCTTTCCTAAATTCAAATAAATATCTAAGTTTTAGATCATTTTGATGAATTGAGGATATATGAATGTTATTTTGTAGTGATGGGGGAAGTGGGGGGGAGTTCAGAGGGAGGAGAAAGGGTAGAGACAGTGGATGTGAAGAGGGTGGTGGTGGAGGAGAGAGAAGATAGGGTGGCGGCGGTGGCAGTGGCGGCGTTGTCGTCTCCGAACAGTACGGTGTCATGTTTTGAAATGGAATTTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGATTAGAAGGAAGAGATCATGGGATCATATGGAAATGGAAACAGAAAGAGGAGGAGGAGGAGGAGGTTGTTCAAGAATAATGAGTGATGATGAAGATAACAATGCTTCTGCTTCTGCTGCTGCTCGTAAAAAGCTTCGACTTTCTAAACTACAATCCGCTTTTCTTGAAGAAAGCTTCAAAGAACACACCACTCTTAATCCTGTAAGTCTAAAACACTTCCACAAAACTTAATCCAAACCATACCTTAAACCCATATTCCATCGTCTCTTCCTCCTAATTTCTTTATTTTACTTTTTCACTTGTCTCAAAAACAGACTTCAGAATCAAAAACTAATTCAATTTTATTTCTTAATCAGTTCGGATTATTTTGTGTTAACATCTAATTTCCCTTCAGCTTATGATTCCTTTCTCACTAGGTTTTGGTTAATACTCATTTTGTTTTCAGTTTTCTATTTTTCTATTTCATTCTTTTTCTTAGTTTCTCAATTATGATTTCATATTTGAATTCTTTTGTCAAATTCTAAAAAAAAAAATCAAAATTTAACATGATTTTTTAGTAATATTTATAAGATTACTTTGTCTCTAAAAAAAGCCAAAAAAACAAAATAGTCTTAATTGGCGGTGGTGGTTTTAAGAATGATATAAAGTCTATGAAATAAAATATTCATATATTTTGTACTGAGTGTTTATATATAAATGGAAAGAAAAAAAAAACATATAAATTTTAAATTTTTGGGTATGGCTGAATAATATAATTTTAATTCTTTAAATTAATTTTCAGAAGCAGAAGCTAGCACTAGCAAAGCAGCTAAACCTCCGACCTAGGCAAGTGGAAGTATGGTTTCAAAACAGAAGAGCAAGGTACATAAATCTAATAAATTTCTTTTTGTTTTTTATTATCTTATCGTAATTAATAAACAAAACCAAAAAAGAGAAAAGAATAGAGATGTAATTTATCTGTGTATTTAATTGTATGTGTATGTGTTTTTGTTTAGGACGAAGTTGAAGCAGACAGAAGTAGATTGTGAGTATTTAAGAAGATGCTGTGAGACATTGACAGAAGAGAACAGAAGATTACAAAAAGAACTTCAAGAATTAAGAGCTTTAAAAACTTCTCAGCCTTTTTATATGCAACTTCCAGCCACTACCCTCACCATGTGCCCCTCGTGTGAGCGTGTCGCTACCACCACCACCACCACCCCCGCACCCACCACCCCCGCCCCGTCCTCCGCTCTTTGTCTCGCTAACAAACCCAAGATCTTGCCATTTCCTCACTTGCATCAGGCTGCTTCATGAGCATACTATTGATCACATCATGAAATACAAAAAAGTTCTAGCTGCTATGAGATAATTTTTGTACATATTTTTCCTTTTGATGGGGTTGGAGCTTTGTGGGGATTTTTTCTTTTTTTTTTTGGTCGTCTGTAGCTTTGAGATATATATGGATCTCTCCCTAGTTGTTCTTTTATCAGTTCTTTTGCTCTTGCATGCATGGTTATTTTTAGGTTTTTTCTTTTGGGATATACTACAAAGTAATTTAAAAGAGTATAGGGAGAGATTATATATTTATGATGTATTCTTGTTTTTTCTTTTGTTTAGTTCTTTAAAAAGAAAACAAGATCAAATGAAAGGAAATTTTATTTCTTTT

mRNA sequence

ATGGTGGAGTTGGGTTTGAGCCTTGGTGATCATCCATCTTCCAATTCCAATAGTAATAATAAGAAGAAGCCATTTTCTAATTTTCTGTCTAAACCAATTTCTTCTTCTTCTAATTCTTCTTCCTCTCTTATGGCTTTGGGGTTTTGTGTTGGTTTAATCGGACGTCATTCTGCTTCTGCTTCTGCTTCTGCTTCGGTTCAAGATGATGAAGAAGATGAAGAACAAGATGATGAGGATGATGATGATGATCGGAAAACGGTCGTTCTTGCTGGTTCAACTTCCGGTTTGGATCCACCGGTTCAGCTTGATCTTCTTCCCTTGGCTCCTGTTCCACGTTCTTCTTCTTCTTCTTCTCCCCTCCTTCCTTTTCCATGGCTTTCTCATCACTTGATGGGGGAAGTGGGGGGGAGTTCAGAGGGAGGAGAAAGGGTAGAGACAGTGGATGTGAAGAGGGTGGTGGTGGAGGAGAGAGAAGATAGGGTGGCGGCGGTGGCAGTGGCGGCGTTGTCGTCTCCGAACAGTACGGTGTCATGTTTTGAAATGGAATTTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGATTAGAAGGAAGAGATCATGGGATCATATGGAAATGGAAACAGAAAGAGGAGGAGGAGGAGGAGGTTGTTCAAGAATAATGAGTGATGATGAAGATAACAATGCTTCTGCTTCTGCTGCTGCTCGTAAAAAGCTTCGACTTTCTAAACTACAATCCGCTTTTCTTGAAGAAAGCTTCAAAGAACACACCACTCTTAATCCTAAGCAGAAGCTAGCACTAGCAAAGCAGCTAAACCTCCGACCTAGGCAAGTGGAAGTATGGTTTCAAAACAGAAGAGCAAGGACGAAGTTGAAGCAGACAGAAGTAGATTGTGAGTATTTAAGAAGATGCTGTGAGACATTGACAGAAGAGAACAGAAGATTACAAAAAGAACTTCAAGAATTAAGAGCTTTAAAAACTTCTCAGCCTTTTTATATGCAACTTCCAGCCACTACCCTCACCATGTGCCCCTCGTGTGAGCGTGTCGCTACCACCACCACCACCACCCCCGCACCCACCACCCCCGCCCCGTCCTCCGCTCTTTGTCTCGCTAACAAACCCAAGATCTTGCCATTTCCTCACTTGCATCAGGCTGCTTCATGA

Coding sequence (CDS)

ATGGTGGAGTTGGGTTTGAGCCTTGGTGATCATCCATCTTCCAATTCCAATAGTAATAATAAGAAGAAGCCATTTTCTAATTTTCTGTCTAAACCAATTTCTTCTTCTTCTAATTCTTCTTCCTCTCTTATGGCTTTGGGGTTTTGTGTTGGTTTAATCGGACGTCATTCTGCTTCTGCTTCTGCTTCTGCTTCGGTTCAAGATGATGAAGAAGATGAAGAACAAGATGATGAGGATGATGATGATGATCGGAAAACGGTCGTTCTTGCTGGTTCAACTTCCGGTTTGGATCCACCGGTTCAGCTTGATCTTCTTCCCTTGGCTCCTGTTCCACGTTCTTCTTCTTCTTCTTCTCCCCTCCTTCCTTTTCCATGGCTTTCTCATCACTTGATGGGGGAAGTGGGGGGGAGTTCAGAGGGAGGAGAAAGGGTAGAGACAGTGGATGTGAAGAGGGTGGTGGTGGAGGAGAGAGAAGATAGGGTGGCGGCGGTGGCAGTGGCGGCGTTGTCGTCTCCGAACAGTACGGTGTCATGTTTTGAAATGGAATTTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGATTAGAAGGAAGAGATCATGGGATCATATGGAAATGGAAACAGAAAGAGGAGGAGGAGGAGGAGGTTGTTCAAGAATAATGAGTGATGATGAAGATAACAATGCTTCTGCTTCTGCTGCTGCTCGTAAAAAGCTTCGACTTTCTAAACTACAATCCGCTTTTCTTGAAGAAAGCTTCAAAGAACACACCACTCTTAATCCTAAGCAGAAGCTAGCACTAGCAAAGCAGCTAAACCTCCGACCTAGGCAAGTGGAAGTATGGTTTCAAAACAGAAGAGCAAGGACGAAGTTGAAGCAGACAGAAGTAGATTGTGAGTATTTAAGAAGATGCTGTGAGACATTGACAGAAGAGAACAGAAGATTACAAAAAGAACTTCAAGAATTAAGAGCTTTAAAAACTTCTCAGCCTTTTTATATGCAACTTCCAGCCACTACCCTCACCATGTGCCCCTCGTGTGAGCGTGTCGCTACCACCACCACCACCACCCCCGCACCCACCACCCCCGCCCCGTCCTCCGCTCTTTGTCTCGCTAACAAACCCAAGATCTTGCCATTTCCTCACTTGCATCAGGCTGCTTCATGA

Protein sequence

MVELGLSLGDHPSSNSNSNNKKKPFSNFLSKPISSSSNSSSSLMALGFCVGLIGRHSASASASASVQDDEEDEEQDDEDDDDDRKTVVLAGSTSGLDPPVQLDLLPLAPVPRSSSSSSPLLPFPWLSHHLMGEVGGSSEGGERVETVDVKRVVVEEREDRVAAVAVAALSSPNSTVSCFEMEFGGGGGGGGGGIRRKRSWDHMEMETERGGGGGGCSRIMSDDEDNNASASAAARKKLRLSKLQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLRRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMCPSCERVATTTTTTPAPTTPAPSSALCLANKPKILPFPHLHQAAS*

Homology

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BLAST of CsaV3_3G038700 vs. NCBI nr
Match: XP_004136729.2 (homeobox-leucine zipper protein HOX11 [Cucumis sativus] >KGN59289.1 hypothetical protein Csa_000905 [Cucumis sativus])

HSP 1 Score: 725.3 bits (1871), Expect = 2.7e-205
Identity = 386/386 (100.00%), Postives = 386/386 (100.00%), Query Frame = 0


Query: 1   MVELGLSLGDHPSSNSNSNNKKKPFSNFLSKPISSSSNSSSSLMALGFCVGLIGRHSASA 60
           MVELGLSLGDHPSSNSNSNNKKKPFSNFLSKPISSSSNSSSSLMALGFCVGLIGRHSASA
Sbjct: 1   MVELGLSLGDHPSSNSNSNNKKKPFSNFLSKPISSSSNSSSSLMALGFCVGLIGRHSASA 60

Query: 61  SASASVQDDEEDEEQDDEDDDDDRKTVVLAGSTSGLDPPVQLDLLPLAPVPRSSSSSSPL 120
           SASASVQDDEEDEEQDDEDDDDDRKTVVLAGSTSGLDPPVQLDLLPLAPVPRSSSSSSPL
Sbjct: 61  SASASVQDDEEDEEQDDEDDDDDRKTVVLAGSTSGLDPPVQLDLLPLAPVPRSSSSSSPL 120

Query: 121 LPFPWLSHHLMGEVGGSSEGGERVETVDVKRVVVEEREDRVAAVAVAALSSPNSTVSCFE 180
           LPFPWLSHHLMGEVGGSSEGGERVETVDVKRVVVEEREDRVAAVAVAALSSPNSTVSCFE
Sbjct: 121 LPFPWLSHHLMGEVGGSSEGGERVETVDVKRVVVEEREDRVAAVAVAALSSPNSTVSCFE 180

Query: 181 MEFGGGGGGGGGGIRRKRSWDHMEMETERGGGGGGCSRIMSDDEDNNASASAAARKKLRL 240
           MEFGGGGGGGGGGIRRKRSWDHMEMETERGGGGGGCSRIMSDDEDNNASASAAARKKLRL
Sbjct: 181 MEFGGGGGGGGGGIRRKRSWDHMEMETERGGGGGGCSRIMSDDEDNNASASAAARKKLRL 240

Query: 241 SKLQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYL 300
           SKLQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYL
Sbjct: 241 SKLQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYL 300

Query: 301 RRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMCPSCERVATTTTTTPAPTT 360
           RRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMCPSCERVATTTTTTPAPTT
Sbjct: 301 RRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMCPSCERVATTTTTTPAPTT 360

Query: 361 PAPSSALCLANKPKILPFPHLHQAAS 387
           PAPSSALCLANKPKILPFPHLHQAAS
Sbjct: 361 PAPSSALCLANKPKILPFPHLHQAAS 386

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BLAST of CsaV3_3G038700 vs. NCBI nr
Match: XP_008443033.1 (PREDICTED: homeobox-leucine zipper protein HOX11 [Cucumis melo])

HSP 1 Score: 659.4 bits (1700), Expect = 1.8e-185
Identity = 368/388 (94.85%), Postives = 372/388 (95.88%), Query Frame = 0


Query: 1   MVELGLSLGDHPSSNSNSNNKKKPFSNFLSKPISSSSNSSSSLMALGFCVGLIGRHSASA 60
           MVELGLSLGDHPSSNSN NN  KPFSNFLSKPISSSSNSSSSLMALGFCVGLIGRH  SA
Sbjct: 1   MVELGLSLGDHPSSNSN-NNTNKPFSNFLSKPISSSSNSSSSLMALGFCVGLIGRH--SA 60

Query: 61  SASASVQDDEEDEEQDDEDDDDDRKTVVLAGSTSGLDPPVQLDLLPLAPVPRSSSSSSPL 120
           SASASVQDDEED+  D+ DDDDDRKT VLAGSTSGLDPPVQLDLLPLAPVPRSSSSSSPL
Sbjct: 61  SASASVQDDEEDD--DELDDDDDRKT-VLAGSTSGLDPPVQLDLLPLAPVPRSSSSSSPL 120

Query: 121 LPFPWLSHHLMGEVGGSSEGGERVETVDVKRVVVEEREDRVAAVAVAALSSPNSTVSCFE 180
           LPFPWLSHHLMGEVGGSSEGGERVET+DVKRV+VEEREDRVAAVAVAALSSPNSTVSCFE
Sbjct: 121 LPFPWLSHHLMGEVGGSSEGGERVETLDVKRVLVEEREDRVAAVAVAALSSPNSTVSCFE 180

Query: 181 MEFGGGGGGGGGGIRRKRSWDHMEMETERGGG-GGGCSRIMSDDEDNNASASAAARKKLR 240
           MEF   GGGGGGGIRRKRSWDHMEMETERGGG GGGCSRIMSDDEDNNASASAAARKKLR
Sbjct: 181 MEF---GGGGGGGIRRKRSWDHMEMETERGGGSGGGCSRIMSDDEDNNASASAAARKKLR 240

Query: 241 LSKLQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEY 300
           LSK QSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEY
Sbjct: 241 LSKQQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEY 300

Query: 301 LRRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMCPSCERVA-TTTTTTPAP 360
           LRRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMCPSCERVA TTTTTT AP
Sbjct: 301 LRRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMCPSCERVATTTTTTTTAP 360

Query: 361 TTPAPSSALCLANKPKILPFPHLHQAAS 387
           TTPAPSSALCLANKPKILPFPHLHQAAS
Sbjct: 361 TTPAPSSALCLANKPKILPFPHLHQAAS 379

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BLAST of CsaV3_3G038700 vs. NCBI nr
Match: XP_038905251.1 (homeobox-leucine zipper protein HOX11-like [Benincasa hispida])

HSP 1 Score: 519.2 bits (1336), Expect = 3.0e-143
Identity = 322/400 (80.50%), Postives = 334/400 (83.50%), Query Frame = 0


Query: 2   VELGLSLGDHPSSNSNSNNKKKPFSNFLSKPISSSSNSSSSLMALGFCVGLIGRHSASAS 61
           +ELGLSLGDHP SNSN     KPF  FLSKP+SSS  SSSSLMALGFCVGLIG HS SAS
Sbjct: 1   MELGLSLGDHPPSNSN-----KPF-GFLSKPLSSS--SSSSLMALGFCVGLIGHHSTSAS 60

Query: 62  ASASVQDDEEDEEQDDEDDDDDRKTVVLAGSTSGLDPPVQLDLLPLAPVPRSSSSSSPLL 121
           ASASV DDEEDE+ +DEDDD+D+KT VL GSTSGLDPPVQLDLLPLAPVPRSSSSS   L
Sbjct: 61  ASASVHDDEEDED-EDEDDDNDQKT-VLPGSTSGLDPPVQLDLLPLAPVPRSSSSS---L 120

Query: 122 PFPWLSHHLMGEVGGSSEGGERVETVDVKRV---VVEEREDRVAAVAVAALSSPNSTVSC 181
           PFPWLSHHLM EV  SSE GERVE +DV RV     EE ED+    AVAALSSPNSTVSC
Sbjct: 121 PFPWLSHHLMAEV-ESSERGERVE-LDVNRVAAAAAEETEDK----AVAALSSPNSTVSC 180

Query: 182 FEMEFGGGGGGGGGGIRRKRSWDHMEME-TERGGGGGGCSRIMSDDEDNNAS-ASAAARK 241
           F+MEF   G   GGGIRRKRSW+ MEME TER    GGCSR MSDD+DNNAS A+AAARK
Sbjct: 181 FQMEF---GVRNGGGIRRKRSWE-MEMEITER----GGCSR-MSDDDDNNASAAAAAARK 240

Query: 242 KLRLSKLQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVD 301
           KLRLSK QSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVD
Sbjct: 241 KLRLSKQQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVD 300

Query: 302 CEYLRRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMCPSCERVATTTTT-- 361
           CEYLRRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMCPSCERVAT T T  
Sbjct: 301 CEYLRRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMCPSCERVATATATAT 360

Query: 362 --------TPAPTTPAPSSALCLANKPKILPFPHLHQAAS 387
                    P  TTP PSSALCLANKPKILPFPHLHQAAS
Sbjct: 361 TTAPTASVAPKTTTPTPSSALCLANKPKILPFPHLHQAAS 372

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BLAST of CsaV3_3G038700 vs. NCBI nr
Match: XP_022151365.1 (homeobox-leucine zipper protein HOX11 isoform X1 [Momordica charantia])

HSP 1 Score: 423.3 bits (1087), Expect = 2.2e-114
Identity = 274/407 (67.32%), Postives = 301/407 (73.96%), Query Frame = 0


Query: 2   VELGLSLGDHPSSNSNSNNKKKPFSNFLSKPIS-SSSNSSSSLMALGFCVGLIGRHSASA 61
           +EL LSLGD P++N+      KPF  FLSKP   SSS+S+S  MALGFCVGL  R SASA
Sbjct: 1   MELALSLGDTPTNNN------KPF-GFLSKPSKLSSSSSASPFMALGFCVGL-ARDSASA 60

Query: 62  SASAS--------------VQDDEEDEEQDDEDDDDDRKTVVLAGSTSGLDPPVQLDLLP 121
           SAS S              V+++++DEE+D+EDDDD+R  ++L GS SG DPPVQLDLLP
Sbjct: 61  SASGSGSGSASIHDDQGREVREEDDDEEEDEEDDDDER--IILPGSGSGSDPPVQLDLLP 120

Query: 122 LAPVPRSSSSSSPLLPFPWLSHHLMGEVGGSSEGGERVETVDVKRV----VVEEREDRVA 181
            APVPRS  SSS  LPFPWLS HLM E G S  G ERV  +DV R+      EE +DR A
Sbjct: 121 PAPVPRSHHSSSSHLPFPWLSDHLMAERGCSDGGAERV--LDVNRLPAVGPAEETDDR-A 180

Query: 182 AVAVAALSSPNSTVSCFEMEFGGGGGGGGGGIRRKRSWDHMEMETERGGGGGGCSRIMSD 241
           A A A +SSPNS VS F+M+FG   GGG      KRS D  EMETER       SRI  D
Sbjct: 181 AAAAAGMSSPNSAVSSFQMDFGVRNGGGS-----KRSSD-FEMETERAS-----SRISDD 240

Query: 242 DEDNNASASAAARKKLRLSKLQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQ 301
           DE      + +ARKKLRLSK QSAFLEESFKEH+TLNPKQKLALAKQLNLRPRQVEVWFQ
Sbjct: 241 DE------NGSARKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQ 300

Query: 302 NRRARTKLKQTEVDCEYLRRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMC 361
           NRRARTKLKQTEVDCEYLRRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMC
Sbjct: 301 NRRARTKLKQTEVDCEYLRRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMC 360

Query: 362 PSCERVATTTTTTPAPTTPAPS---SALCLANKPKILPFPHLHQAAS 387
           PSCERVATT     A TT A +   SALCLANKP+ILPFPHLHQAAS
Sbjct: 361 PSCERVATTAPAPVAKTTSATATNPSALCLANKPRILPFPHLHQAAS 377

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BLAST of CsaV3_3G038700 vs. NCBI nr
Match: KAA0043744.1 (homeobox-leucine zipper protein HOX11 [Cucumis melo var. makuwa] >TYK25388.1 homeobox-leucine zipper protein HOX11 [Cucumis melo var. makuwa])

HSP 1 Score: 410.6 bits (1054), Expect = 1.5e-110
Identity = 229/244 (93.85%), Postives = 233/244 (95.49%), Query Frame = 0


Query: 44  MALGFCVGLIGRHSASASASASVQDDEEDEEQDDEDDDDDRKTVVLAGSTSGLDPPVQLD 103
           MALGFCVGLIGRH  SASASASVQDDEED+  D+ DDDDDRKT VLAGSTSGLDPPVQLD
Sbjct: 1   MALGFCVGLIGRH--SASASASVQDDEEDD--DELDDDDDRKT-VLAGSTSGLDPPVQLD 60

Query: 104 LLPLAPVPRSSSSSSPLLPFPWLSHHLMGEVGGSSEGGERVETVDVKRVVVEEREDRVAA 163
           LLPLAPVPRSSSSSSPLLPFPWLSHHLMGEVGGSSEGGERVET+DVKRV+VEEREDRVAA
Sbjct: 61  LLPLAPVPRSSSSSSPLLPFPWLSHHLMGEVGGSSEGGERVETLDVKRVLVEEREDRVAA 120

Query: 164 VAVAALSSPNSTVSCFEMEFGGGGGGGGGGIRRKRSWDHMEMETERGGG-GGGCSRIMSD 223
           VAVAALSSPNSTVSCFEMEF   GGGGGGGIRRKRSWDHMEMETERGGG GGGCSRIMSD
Sbjct: 121 VAVAALSSPNSTVSCFEMEF---GGGGGGGIRRKRSWDHMEMETERGGGSGGGCSRIMSD 180

Query: 224 DEDNNASASAAARKKLRLSKLQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQ 283
           DEDNNASASAAARKKLRLSK QSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQ
Sbjct: 181 DEDNNASASAAARKKLRLSKQQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQ 236

Query: 284 NRRA 287
           NRRA
Sbjct: 241 NRRA 236

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BLAST of CsaV3_3G038700 vs. ExPASy Swiss-Prot
Match: P46665 (Homeobox-leucine zipper protein HAT14 OS=Arabidopsis thaliana OX=3702 GN=HAT14 PE=2 SV=3)

HSP 1 Score: 241.5 bits (615), Expect = 1.6e-62
Identity = 179/379 (47.23%), Postives = 226/379 (59.63%), Query Frame = 0


Query: 2   VELGLSLGDHPSSNSNSNNKKKPFSNFLSKPISSSSNSSSSLMALGFCVGLI----GRHS 61
           +EL LSLGD+     +   K    +N       S S++S+S   LGFC+ L     G  S
Sbjct: 1   MELALSLGDNTKKQFSFMEKNSKINN------PSVSSTSTSEKDLGFCMALDVAFGGHRS 60

Query: 62  ASASASASVQDDEEDEEQDDEDDDDDRKTVVLAGSTSGLDPPVQLDLLPLAPVPRSSSSS 121
            S+S+S SV+D+++      +  D+ R        +S +DPP+QL               
Sbjct: 61  LSSSSSPSVEDEKKKPAPRAKKSDEFR-------VSSSVDPPLQLQ-------------- 120

Query: 122 SPLLPFP-WLSHHLMGEVGGSSEGGERVETVDVKRVVVEEREDRVAAVAVAALSSPNSTV 181
              L FP WL  +  G  GG    G           VVEE E+   AV   ++S P+S  
Sbjct: 121 ---LHFPNWLPENSKGRQGGRMPLG--------AATVVEEEEEEEEAVPSMSVSPPDSVT 180

Query: 182 SCFEMEFGGGGGGGGGGIRRKRSWDHMEMETERGGGGGGCSRIMSDDEDNNASASAAARK 241
           S F+++F    G    G  R+ +   ++ E ER       SR  ++D D+    + + RK
Sbjct: 181 SSFQLDF----GIKSYGYERRSNKRDIDDEVER-----SASRASNEDNDDE---NGSTRK 240

Query: 242 KLRLSKLQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVD 301
           KLRLSK QSAFLE+SFKEH+TLNPKQK+ALAKQLNLRPRQVEVWFQNRRARTKLKQTEVD
Sbjct: 241 KLRLSKDQSAFLEDSFKEHSTLNPKQKIALAKQLNLRPRQVEVWFQNRRARTKLKQTEVD 300

Query: 302 CEYLRRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMCPSCERVATTTTTTP 361
           CEYL+RCCE+LTEENRRLQKE++ELR LKTS PFYMQLPATTLTMCPSCERVAT+     
Sbjct: 301 CEYLKRCCESLTEENRRLQKEVKELRTLKTSTPFYMQLPATTLTMCPSCERVATSAA--- 325

Query: 362 APTTPAPSSALCLANKPKI 376
            P+T A  + LCL+    I
Sbjct: 361 QPSTSAAHN-LCLSTSSLI 325

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BLAST of CsaV3_3G038700 vs. ExPASy Swiss-Prot
Match: Q67UE2 (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX11 PE=2 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.2e-57
Identity = 153/282 (54.26%), Postives = 173/282 (61.35%), Query Frame = 0


Query: 94  SGLDPPVQLDLLPLA---------PVPRSSSSSSPLLPFPWLSHHLMGEVGGSSEGGERV 153
           S  +P V+L LLP+          P P SS S            +     GG   GG   
Sbjct: 56  SSPEPTVRLTLLPMVPGLGLPWPPPPPPSSESRHLEASTRGFDVNRPPSSGGGGGGGG-- 115

Query: 154 ETVDVKRVVVEEREDRVAAVAVAALSSPNSTVSCFEMEFGGGGGGGGGGIRRKRSWDHME 213
                     EE +D VA  A++  SSPN++   F M+   G G GG             
Sbjct: 116 ---------AEEEQDDVAGAALS--SSPNNSAGSFPMDDFSGHGLGGN------------ 175

Query: 214 METERGGGGGGCSRIMSDDEDNNASASAAARKKLRLSKLQSAFLEESFKEHTTLNPKQKL 273
            +   GGGGG  S   + DED+  S    ARKKLRLSK QSAFLEESFKEH+TLNPKQKL
Sbjct: 176 -DAAPGGGGGDRSCSRASDEDDGGS----ARKKLRLSKEQSAFLEESFKEHSTLNPKQKL 235

Query: 274 ALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLRRCCETLTEENRRLQKELQELRAL 333
           ALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYL+RCCETLTEENRRLQKEL ELRAL
Sbjct: 236 ALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELAELRAL 295

Query: 334 KTSQPFYMQLPATTLTMCPSCERVATTTTTTPAPTTPAPSSA 367
           KT  PFYM LPATTL+MCPSCERVA+ +    A +    S+A
Sbjct: 296 KTVHPFYMHLPATTLSMCPSCERVASNSAPATASSAATSSTA 307

[Close]

BLAST of CsaV3_3G038700 vs. ExPASy Swiss-Prot
Match: A2YW03 (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. indica OX=39946 GN=HOX27 PE=2 SV=2)

HSP 1 Score: 224.9 bits (572), Expect = 1.5e-57
Identity = 156/308 (50.65%), Postives = 183/308 (59.42%), Query Frame = 0


Query: 77  DEDDDDDRKTVVLAGSTSGLDPPVQLDLLPLAPVPRSSSSSSPLLPFPWLSHHLMGEVGG 136
           +E++   R+ VV AG  +         +   +P P    S    L   W S     E   
Sbjct: 37  EEEERGRREDVVGAGRWAA--------MAAASPEPSVRLSLVSSLGLHWPSETGRSEAAA 96

Query: 137 SSEGGERVETVDVKRVVVEEREDRVAAVAVAALSSPNSTVSCFEMEFGGGGGGGGGGIRR 196
                 R  +V      +E+ E+   A A A  SSPN +   F ++  G G  G      
Sbjct: 97  RGFDVNRAPSVAAGAPGMEDDEEGPGA-APALSSSPNDSGGSFPLDLSGHGLRG------ 156

Query: 197 KRSWDHMEMETERGGGGGGCSRIMSDDEDNNASASAAARKKLRLSKLQSAFLEESFKEHT 256
                H E   + GGGGGG  R  S   D++  AS  ARKKLRLSK QSAFLEESFKEH+
Sbjct: 157 -----HAEAAAQGGGGGGGGERSSSRASDDDEGAS--ARKKLRLSKEQSAFLEESFKEHS 216

Query: 257 TLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLRRCCETLTEENRRLQK 316
           TLNPKQK+ALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYL+RCCETLTEENRRL K
Sbjct: 217 TLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHK 276

Query: 317 ELQELRALKTSQPFYMQLPATTLTMCPSCERV----ATTTTTTPAPTTPAPSSALCLANK 376
           EL ELRALKT++PFYM LPATTL+MCPSCERV    AT +T+ PA  T   ++    A  
Sbjct: 277 ELAELRALKTARPFYMHLPATTLSMCPSCERVASNPATASTSAPAAATSPAAAPTAAART 322

Query: 377 PKILPFPH 381
               P PH
Sbjct: 337 AVASPEPH 322

[Close]

BLAST of CsaV3_3G038700 vs. ExPASy Swiss-Prot
Match: Q6YPD0 (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX27 PE=2 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.5e-57
Identity = 156/308 (50.65%), Postives = 183/308 (59.42%), Query Frame = 0


Query: 77  DEDDDDDRKTVVLAGSTSGLDPPVQLDLLPLAPVPRSSSSSSPLLPFPWLSHHLMGEVGG 136
           +E++   R+ VV AG  +         +   +P P    S    L   W S     E   
Sbjct: 37  EEEERGRREDVVGAGRWAA--------MAAASPEPSVRLSLVSSLGLHWPSETGRSEAAA 96

Query: 137 SSEGGERVETVDVKRVVVEEREDRVAAVAVAALSSPNSTVSCFEMEFGGGGGGGGGGIRR 196
                 R  +V      +E+ E+   A A A  SSPN +   F ++  G G  G      
Sbjct: 97  RGFDVNRAPSVAAGAPGMEDDEEGPGA-APALSSSPNDSGGSFPLDLSGQGLRG------ 156

Query: 197 KRSWDHMEMETERGGGGGGCSRIMSDDEDNNASASAAARKKLRLSKLQSAFLEESFKEHT 256
                H E   + GGGGGG  R  S   D++  AS  ARKKLRLSK QSAFLEESFKEH+
Sbjct: 157 -----HAEAAAQGGGGGGGGERSSSRASDDDEGAS--ARKKLRLSKEQSAFLEESFKEHS 216

Query: 257 TLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLRRCCETLTEENRRLQK 316
           TLNPKQK+ALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYL+RCCETLTEENRRL K
Sbjct: 217 TLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHK 276

Query: 317 ELQELRALKTSQPFYMQLPATTLTMCPSCERV----ATTTTTTPAPTTPAPSSALCLANK 376
           EL ELRALKT++PFYM LPATTL+MCPSCERV    AT +T+ PA  T   ++    A  
Sbjct: 277 ELAELRALKTARPFYMHLPATTLSMCPSCERVASNPATASTSAPAAATSPAAAPTAAART 322

Query: 377 PKILPFPH 381
               P PH
Sbjct: 337 AVASPEPH 322

[Close]

BLAST of CsaV3_3G038700 vs. ExPASy Swiss-Prot
Match: A2Z1U1 (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. indica OX=39946 GN=HOX11 PE=2 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 2.6e-57
Identity = 137/212 (64.62%), Postives = 153/212 (72.17%), Query Frame = 0


Query: 155 EEREDRVAAVAVAALSSPNSTVSCFEMEFGGGGGGGGGGIRRKRSWDHMEMETERGGGGG 214
           EE +D VA  A++  SSPN++   F M+   G G GG              +   GGGGG
Sbjct: 28  EEEQDDVAGAALS--SSPNNSAGSFPMDDFSGHGLGGN-------------DAAPGGGGG 87

Query: 215 GCSRIMSDDEDNNASASAAARKKLRLSKLQSAFLEESFKEHTTLNPKQKLALAKQLNLRP 274
             S   + DED+  S    ARKKLRLSK QSAFLEESFKEH+TLNPKQKLALAKQLNLRP
Sbjct: 88  DRSCSRASDEDDGGS----ARKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRP 147

Query: 275 RQVEVWFQNRRARTKLKQTEVDCEYLRRCCETLTEENRRLQKELQELRALKTSQPFYMQL 334
           RQVEVWFQNRRARTKLKQTEVDCEYL+RCCETLTEENRRLQKEL ELRALKT  PFYM L
Sbjct: 148 RQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELAELRALKTVHPFYMHL 207

Query: 335 PATTLTMCPSCERVATTTTTTPAPTTPAPSSA 367
           PATTL+MCPSCERVA+ +    A +    S+A
Sbjct: 208 PATTLSMCPSCERVASNSAPATASSAATSSTA 220

[Close]

BLAST of CsaV3_3G038700 vs. ExPASy TrEMBL
Match: A0A0A0LEE1 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G800720 PE=4 SV=1)

HSP 1 Score: 725.3 bits (1871), Expect = 1.3e-205
Identity = 386/386 (100.00%), Postives = 386/386 (100.00%), Query Frame = 0


Query: 1   MVELGLSLGDHPSSNSNSNNKKKPFSNFLSKPISSSSNSSSSLMALGFCVGLIGRHSASA 60
           MVELGLSLGDHPSSNSNSNNKKKPFSNFLSKPISSSSNSSSSLMALGFCVGLIGRHSASA
Sbjct: 1   MVELGLSLGDHPSSNSNSNNKKKPFSNFLSKPISSSSNSSSSLMALGFCVGLIGRHSASA 60

Query: 61  SASASVQDDEEDEEQDDEDDDDDRKTVVLAGSTSGLDPPVQLDLLPLAPVPRSSSSSSPL 120
           SASASVQDDEEDEEQDDEDDDDDRKTVVLAGSTSGLDPPVQLDLLPLAPVPRSSSSSSPL
Sbjct: 61  SASASVQDDEEDEEQDDEDDDDDRKTVVLAGSTSGLDPPVQLDLLPLAPVPRSSSSSSPL 120

Query: 121 LPFPWLSHHLMGEVGGSSEGGERVETVDVKRVVVEEREDRVAAVAVAALSSPNSTVSCFE 180
           LPFPWLSHHLMGEVGGSSEGGERVETVDVKRVVVEEREDRVAAVAVAALSSPNSTVSCFE
Sbjct: 121 LPFPWLSHHLMGEVGGSSEGGERVETVDVKRVVVEEREDRVAAVAVAALSSPNSTVSCFE 180

Query: 181 MEFGGGGGGGGGGIRRKRSWDHMEMETERGGGGGGCSRIMSDDEDNNASASAAARKKLRL 240
           MEFGGGGGGGGGGIRRKRSWDHMEMETERGGGGGGCSRIMSDDEDNNASASAAARKKLRL
Sbjct: 181 MEFGGGGGGGGGGIRRKRSWDHMEMETERGGGGGGCSRIMSDDEDNNASASAAARKKLRL 240

Query: 241 SKLQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYL 300
           SKLQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYL
Sbjct: 241 SKLQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYL 300

Query: 301 RRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMCPSCERVATTTTTTPAPTT 360
           RRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMCPSCERVATTTTTTPAPTT
Sbjct: 301 RRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMCPSCERVATTTTTTPAPTT 360

Query: 361 PAPSSALCLANKPKILPFPHLHQAAS 387
           PAPSSALCLANKPKILPFPHLHQAAS
Sbjct: 361 PAPSSALCLANKPKILPFPHLHQAAS 386

[Close]

BLAST of CsaV3_3G038700 vs. ExPASy TrEMBL
Match: A0A1S3B7U4 (homeobox-leucine zipper protein HOX11 OS=Cucumis melo OX=3656 GN=LOC103486752 PE=4 SV=1)

HSP 1 Score: 659.4 bits (1700), Expect = 8.9e-186
Identity = 368/388 (94.85%), Postives = 372/388 (95.88%), Query Frame = 0


Query: 1   MVELGLSLGDHPSSNSNSNNKKKPFSNFLSKPISSSSNSSSSLMALGFCVGLIGRHSASA 60
           MVELGLSLGDHPSSNSN NN  KPFSNFLSKPISSSSNSSSSLMALGFCVGLIGRH  SA
Sbjct: 1   MVELGLSLGDHPSSNSN-NNTNKPFSNFLSKPISSSSNSSSSLMALGFCVGLIGRH--SA 60

Query: 61  SASASVQDDEEDEEQDDEDDDDDRKTVVLAGSTSGLDPPVQLDLLPLAPVPRSSSSSSPL 120
           SASASVQDDEED+  D+ DDDDDRKT VLAGSTSGLDPPVQLDLLPLAPVPRSSSSSSPL
Sbjct: 61  SASASVQDDEEDD--DELDDDDDRKT-VLAGSTSGLDPPVQLDLLPLAPVPRSSSSSSPL 120

Query: 121 LPFPWLSHHLMGEVGGSSEGGERVETVDVKRVVVEEREDRVAAVAVAALSSPNSTVSCFE 180
           LPFPWLSHHLMGEVGGSSEGGERVET+DVKRV+VEEREDRVAAVAVAALSSPNSTVSCFE
Sbjct: 121 LPFPWLSHHLMGEVGGSSEGGERVETLDVKRVLVEEREDRVAAVAVAALSSPNSTVSCFE 180

Query: 181 MEFGGGGGGGGGGIRRKRSWDHMEMETERGGG-GGGCSRIMSDDEDNNASASAAARKKLR 240
           MEF   GGGGGGGIRRKRSWDHMEMETERGGG GGGCSRIMSDDEDNNASASAAARKKLR
Sbjct: 181 MEF---GGGGGGGIRRKRSWDHMEMETERGGGSGGGCSRIMSDDEDNNASASAAARKKLR 240

Query: 241 LSKLQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEY 300
           LSK QSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEY
Sbjct: 241 LSKQQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEY 300

Query: 301 LRRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMCPSCERVA-TTTTTTPAP 360
           LRRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMCPSCERVA TTTTTT AP
Sbjct: 301 LRRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMCPSCERVATTTTTTTTAP 360

Query: 361 TTPAPSSALCLANKPKILPFPHLHQAAS 387
           TTPAPSSALCLANKPKILPFPHLHQAAS
Sbjct: 361 TTPAPSSALCLANKPKILPFPHLHQAAS 379

[Close]

BLAST of CsaV3_3G038700 vs. ExPASy TrEMBL
Match: A0A6J1DAZ1 (homeobox-leucine zipper protein HOX11 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019325 PE=3 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 1.1e-114
Identity = 274/407 (67.32%), Postives = 301/407 (73.96%), Query Frame = 0


Query: 2   VELGLSLGDHPSSNSNSNNKKKPFSNFLSKPIS-SSSNSSSSLMALGFCVGLIGRHSASA 61
           +EL LSLGD P++N+      KPF  FLSKP   SSS+S+S  MALGFCVGL  R SASA
Sbjct: 1   MELALSLGDTPTNNN------KPF-GFLSKPSKLSSSSSASPFMALGFCVGL-ARDSASA 60

Query: 62  SASAS--------------VQDDEEDEEQDDEDDDDDRKTVVLAGSTSGLDPPVQLDLLP 121
           SAS S              V+++++DEE+D+EDDDD+R  ++L GS SG DPPVQLDLLP
Sbjct: 61  SASGSGSGSASIHDDQGREVREEDDDEEEDEEDDDDER--IILPGSGSGSDPPVQLDLLP 120

Query: 122 LAPVPRSSSSSSPLLPFPWLSHHLMGEVGGSSEGGERVETVDVKRV----VVEEREDRVA 181
            APVPRS  SSS  LPFPWLS HLM E G S  G ERV  +DV R+      EE +DR A
Sbjct: 121 PAPVPRSHHSSSSHLPFPWLSDHLMAERGCSDGGAERV--LDVNRLPAVGPAEETDDR-A 180

Query: 182 AVAVAALSSPNSTVSCFEMEFGGGGGGGGGGIRRKRSWDHMEMETERGGGGGGCSRIMSD 241
           A A A +SSPNS VS F+M+FG   GGG      KRS D  EMETER       SRI  D
Sbjct: 181 AAAAAGMSSPNSAVSSFQMDFGVRNGGGS-----KRSSD-FEMETERAS-----SRISDD 240

Query: 242 DEDNNASASAAARKKLRLSKLQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQ 301
           DE      + +ARKKLRLSK QSAFLEESFKEH+TLNPKQKLALAKQLNLRPRQVEVWFQ
Sbjct: 241 DE------NGSARKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQ 300

Query: 302 NRRARTKLKQTEVDCEYLRRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMC 361
           NRRARTKLKQTEVDCEYLRRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMC
Sbjct: 301 NRRARTKLKQTEVDCEYLRRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMC 360

Query: 362 PSCERVATTTTTTPAPTTPAPS---SALCLANKPKILPFPHLHQAAS 387
           PSCERVATT     A TT A +   SALCLANKP+ILPFPHLHQAAS
Sbjct: 361 PSCERVATTAPAPVAKTTSATATNPSALCLANKPRILPFPHLHQAAS 377

[Close]

BLAST of CsaV3_3G038700 vs. ExPASy TrEMBL
Match: A0A5A7TK95 (Homeobox-leucine zipper protein HOX11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005300 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 7.2e-111
Identity = 229/244 (93.85%), Postives = 233/244 (95.49%), Query Frame = 0


Query: 44  MALGFCVGLIGRHSASASASASVQDDEEDEEQDDEDDDDDRKTVVLAGSTSGLDPPVQLD 103
           MALGFCVGLIGRH  SASASASVQDDEED+  D+ DDDDDRKT VLAGSTSGLDPPVQLD
Sbjct: 1   MALGFCVGLIGRH--SASASASVQDDEEDD--DELDDDDDRKT-VLAGSTSGLDPPVQLD 60

Query: 104 LLPLAPVPRSSSSSSPLLPFPWLSHHLMGEVGGSSEGGERVETVDVKRVVVEEREDRVAA 163
           LLPLAPVPRSSSSSSPLLPFPWLSHHLMGEVGGSSEGGERVET+DVKRV+VEEREDRVAA
Sbjct: 61  LLPLAPVPRSSSSSSPLLPFPWLSHHLMGEVGGSSEGGERVETLDVKRVLVEEREDRVAA 120

Query: 164 VAVAALSSPNSTVSCFEMEFGGGGGGGGGGIRRKRSWDHMEMETERGGG-GGGCSRIMSD 223
           VAVAALSSPNSTVSCFEMEF   GGGGGGGIRRKRSWDHMEMETERGGG GGGCSRIMSD
Sbjct: 121 VAVAALSSPNSTVSCFEMEF---GGGGGGGIRRKRSWDHMEMETERGGGSGGGCSRIMSD 180

Query: 224 DEDNNASASAAARKKLRLSKLQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQ 283
           DEDNNASASAAARKKLRLSK QSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQ
Sbjct: 181 DEDNNASASAAARKKLRLSKQQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQ 236

Query: 284 NRRA 287
           NRRA
Sbjct: 241 NRRA 236

[Close]

BLAST of CsaV3_3G038700 vs. ExPASy TrEMBL
Match: A0A6J1DDA9 (homeobox-leucine zipper protein HOX11 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111019325 PE=3 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 2.7e-110
Identity = 269/407 (66.09%), Postives = 296/407 (72.73%), Query Frame = 0


Query: 2   VELGLSLGDHPSSNSNSNNKKKPFSNFLSKPIS-SSSNSSSSLMALGFCVGLIGRHSASA 61
           +EL LSLGD P++N+      KPF  FLSKP   SSS+S+S  MALGFCVGL  R SASA
Sbjct: 1   MELALSLGDTPTNNN------KPF-GFLSKPSKLSSSSSASPFMALGFCVGL-ARDSASA 60

Query: 62  SASAS--------------VQDDEEDEEQDDEDDDDDRKTVVLAGSTSGLDPPVQLDLLP 121
           SAS S              V+++++DEE+D+EDDDD+R  ++L GS SG DPPVQLDLLP
Sbjct: 61  SASGSGSGSASIHDDQGREVREEDDDEEEDEEDDDDER--IILPGSGSGSDPPVQLDLLP 120

Query: 122 LAPVPRSSSSSSPLLPFPWLSHHLMGEVGGSSEGGERVETVDVKRV----VVEEREDRVA 181
            APVPRS  SSS  LPFPWLS H          G ERV  +DV R+      EE +DR A
Sbjct: 121 PAPVPRSHHSSSSHLPFPWLSDHY--------GGAERV--LDVNRLPAVGPAEETDDR-A 180

Query: 182 AVAVAALSSPNSTVSCFEMEFGGGGGGGGGGIRRKRSWDHMEMETERGGGGGGCSRIMSD 241
           A A A +SSPNS VS F+M+FG   GGG      KRS D  EMETER       SRI  D
Sbjct: 181 AAAAAGMSSPNSAVSSFQMDFGVRNGGGS-----KRSSD-FEMETERAS-----SRISDD 240

Query: 242 DEDNNASASAAARKKLRLSKLQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQ 301
           DE      + +ARKKLRLSK QSAFLEESFKEH+TLNPKQKLALAKQLNLRPRQVEVWFQ
Sbjct: 241 DE------NGSARKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQ 300

Query: 302 NRRARTKLKQTEVDCEYLRRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMC 361
           NRRARTKLKQTEVDCEYLRRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMC
Sbjct: 301 NRRARTKLKQTEVDCEYLRRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMC 360

Query: 362 PSCERVATTTTTTPAPTTPAPS---SALCLANKPKILPFPHLHQAAS 387
           PSCERVATT     A TT A +   SALCLANKP+ILPFPHLHQAAS
Sbjct: 361 PSCERVATTAPAPVAKTTSATATNPSALCLANKPRILPFPHLHQAAS 369

[Close]

BLAST of CsaV3_3G038700 vs. TAIR 10
Match: AT5G06710.1 (homeobox from Arabidopsis thaliana )

HSP 1 Score: 241.5 bits (615), Expect = 1.1e-63
Identity = 179/379 (47.23%), Postives = 226/379 (59.63%), Query Frame = 0


Query: 2   VELGLSLGDHPSSNSNSNNKKKPFSNFLSKPISSSSNSSSSLMALGFCVGLI----GRHS 61
           +EL LSLGD+     +   K    +N       S S++S+S   LGFC+ L     G  S
Sbjct: 1   MELALSLGDNTKKQFSFMEKNSKINN------PSVSSTSTSEKDLGFCMALDVAFGGHRS 60

Query: 62  ASASASASVQDDEEDEEQDDEDDDDDRKTVVLAGSTSGLDPPVQLDLLPLAPVPRSSSSS 121
            S+S+S SV+D+++      +  D+ R        +S +DPP+QL               
Sbjct: 61  LSSSSSPSVEDEKKKPAPRAKKSDEFR-------VSSSVDPPLQLQ-------------- 120

Query: 122 SPLLPFP-WLSHHLMGEVGGSSEGGERVETVDVKRVVVEEREDRVAAVAVAALSSPNSTV 181
              L FP WL  +  G  GG    G           VVEE E+   AV   ++S P+S  
Sbjct: 121 ---LHFPNWLPENSKGRQGGRMPLG--------AATVVEEEEEEEEAVPSMSVSPPDSVT 180

Query: 182 SCFEMEFGGGGGGGGGGIRRKRSWDHMEMETERGGGGGGCSRIMSDDEDNNASASAAARK 241
           S F+++F    G    G  R+ +   ++ E ER       SR  ++D D+    + + RK
Sbjct: 181 SSFQLDF----GIKSYGYERRSNKRDIDDEVER-----SASRASNEDNDDE---NGSTRK 240

Query: 242 KLRLSKLQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVD 301
           KLRLSK QSAFLE+SFKEH+TLNPKQK+ALAKQLNLRPRQVEVWFQNRRARTKLKQTEVD
Sbjct: 241 KLRLSKDQSAFLEDSFKEHSTLNPKQKIALAKQLNLRPRQVEVWFQNRRARTKLKQTEVD 300

Query: 302 CEYLRRCCETLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMCPSCERVATTTTTTP 361
           CEYL+RCCE+LTEENRRLQKE++ELR LKTS PFYMQLPATTLTMCPSCERVAT+     
Sbjct: 301 CEYLKRCCESLTEENRRLQKEVKELRTLKTSTPFYMQLPATTLTMCPSCERVATSAA--- 325

Query: 362 APTTPAPSSALCLANKPKI 376
            P+T A  + LCL+    I
Sbjct: 361 QPSTSAAHN-LCLSTSSLI 325

[Close]

BLAST of CsaV3_3G038700 vs. TAIR 10
Match: AT2G44910.1 (homeobox-leucine zipper protein 4 )

HSP 1 Score: 192.6 bits (488), Expect = 5.9e-49
Identity = 149/323 (46.13%), Postives = 183/323 (56.66%), Query Frame = 0


Query: 81  DDDRKTVVLAGSTSGLDPPVQLDLLPLAPVPRSSS---------SSSPLLPFPWLSHHLM 140
           DD     +  G++   +P ++L+L+PL     SSS         +S P         HL 
Sbjct: 5   DDGLGLSLSLGNSQQKEPSLRLNLMPLTTSSSSSSFQHMHNQNNNSHPQKIHNISWTHLF 64

Query: 141 GEVG-------GSSEGGERVETVDVKR----VVVEEREDRVAAVAVAALSSPNSTVSCFE 200
              G        +S+ G  +   +V R    V V + E+  A V     SSPNS VS   
Sbjct: 65  QSSGIKRTTAERNSDAGSFLRGFNVNRAQSSVAVVDLEEEAAVV-----SSPNSAVSSL- 124

Query: 201 MEFGGGGGGGGGGIRRKRSWDHMEME---TERGGGGGGCSRIMSDDEDNNASASAAARKK 260
                   G    +   R  D  E E     RGGG GG     SDDED        +RKK
Sbjct: 125 -------SGNKRDLAVARGGDENEAERASCSRGGGSGG-----SDDED--GGNGDGSRKK 184

Query: 261 LRLSKLQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDC 320
           LRLSK Q+  LEE+FKEH+TLNPKQKLALAKQLNLR RQVEVWFQNRRARTKLKQTEVDC
Sbjct: 185 LRLSKDQALVLEETFKEHSTLNPKQKLALAKQLNLRARQVEVWFQNRRARTKLKQTEVDC 244

Query: 321 EYLRRCCETLTEENRRLQKELQELRALKTSQPFYMQL-PATTLTMCPSCERVATT-TTTT 379
           EYL+RCC+ LTEENRRLQKE+ ELRALK S   YM + P TTLTMCPSCERV+++  T T
Sbjct: 245 EYLKRCCDNLTEENRRLQKEVSELRALKLSPHLYMHMTPPTTLTMCPSCERVSSSAATVT 304

[Close]

BLAST of CsaV3_3G038700 vs. TAIR 10
Match: AT4G37790.1 (Homeobox-leucine zipper protein family )

HSP 1 Score: 190.3 bits (482), Expect = 3.0e-48
Identity = 115/187 (61.50%), Postives = 135/187 (72.19%), Query Frame = 0


Query: 192 GGIRRKR--SWDHMEMETERGGGGGGCSRIMSDDEDNNASASAAARKKLRLSKLQSAFLE 251
           G ++R+R  S    E E E       CSR+ SDD D+    S  ARKKLRL+K QSA LE
Sbjct: 83  GRVKREREISGGDGEEEAEETTERVVCSRV-SDDHDDEEGVS--ARKKLRLTKQQSALLE 142

Query: 252 ESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLRRCCETLTE 311
           ++FK H+TLNPKQK ALA+QLNLRPRQVEVWFQNRRARTKLKQTEVDCE+L++CCETLT+
Sbjct: 143 DNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTD 202

Query: 312 ENRRLQKELQELRALKTSQPFYMQLPATTLTMCPSCERV--ATTTTTTPAPTTPAPSSAL 371
           ENRRLQKELQ+L+ALK SQPFYM +PA TLTMCPSCER+        T A        A 
Sbjct: 203 ENRRLQKELQDLKALKLSQPFYMHMPAATLTMCPSCERLGGGGVGGDTTAVDEETAKGAF 262

Query: 372 CLANKPK 375
            +  KP+
Sbjct: 263 SIVTKPR 266

[Close]

BLAST of CsaV3_3G038700 vs. TAIR 10
Match: AT3G60390.1 (homeobox-leucine zipper protein 3 )

HSP 1 Score: 189.5 bits (480), Expect = 5.0e-48
Identity = 149/310 (48.06%), Postives = 188/310 (60.65%), Query Frame = 0


Query: 78  EDDDDDRKTVVLAGSTSGLDPPVQLDLLPLAP---------VPRSSSSSSPLLPFPWLSH 137
           E DD    ++ L+   +  DP  +L+ +PLA          + +S+ +    +   W++ 
Sbjct: 3   ERDDGLGLSLSLSLGFNQKDPSSRLNPMPLASYASSSHMQHMQQSNYNHPQKIQNTWINM 62

Query: 138 HLMGEVGGSSEGGERVETVDVKR---VVVEEREDRVAAVAVAALSSPNSTVSCF------ 197
               E   +S+    +  +DV R    VV + ED  A V     SSPNSTVS        
Sbjct: 63  FQSSE--RNSDMRSFLRGIDVNRAPSTVVVDVEDEGAGV-----SSPNSTVSSVMSGKKS 122

Query: 198 EMEFGGGGGGGGGGIRRKRSWDHMEMETERGGGGGGCSRIMSDDEDNNASASAAARKKLR 257
           E E     G  GGG    R  D+ E+E      GGG     SDDED + +   ++RKKLR
Sbjct: 123 ERELMAAAGAVGGG----RVEDN-EIERASCSLGGG-----SDDEDGSGNGDDSSRKKLR 182

Query: 258 LSKLQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEY 317
           LSK Q+  LEE+FKEH+TLNPKQK+ALAKQLNLR RQVEVWFQNRRARTKLKQTEVDCEY
Sbjct: 183 LSKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQVEVWFQNRRARTKLKQTEVDCEY 242

Query: 318 LRRCCETLTEENRRLQKELQELRALKTSQPFYMQL-PATTLTMCPSCERVA-TTTTTTPA 368
           L+RCCE LT+ENRRLQKE+ ELRALK S   YM + P TTLTMCPSCERVA T+++++ A
Sbjct: 243 LKRCCENLTDENRRLQKEVSELRALKLSPHLYMHMKPPTTLTMCPSCERVAVTSSSSSVA 295

[Close]

BLAST of CsaV3_3G038700 vs. TAIR 10
Match: AT5G47370.1 (Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein )

HSP 1 Score: 187.6 bits (475), Expect = 1.9e-47
Identity = 123/210 (58.57%), Postives = 138/210 (65.71%), Query Frame = 0


Query: 146 TVDVKRVVVEEREDRVAAVAVAALSSPNSTVSC------FEMEFGGGGGGGGGGIRRKRS 205
           T D++++ V      V       +SSPNST+S        E E   G G G G       
Sbjct: 49  TSDLRKIDVNSFPSTVNCEEDTGVSSPNSTISSTISGKRSEREGISGTGVGSGD------ 108

Query: 206 WDHMEMETERGGGGGGCSRIMSDDEDNNASASAAARKKLRLSKLQSAFLEESFKEHTTLN 265
            DH E+  +R     G SR  SD+E++    S   RKKLRLSK QSAFLEE+FKEH TLN
Sbjct: 109 -DHDEITPDR-----GYSRGTSDEEEDGGETS---RKKLRLSKDQSAFLEETFKEHNTLN 168

Query: 266 PKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLRRCCETLTEENRRLQKELQ 325
           PKQKLALAK+LNL  RQVEVWFQNRRARTKLKQTEVDCEYL+RC E LTEENRRLQKE  
Sbjct: 169 PKQKLALAKKLNLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLQKEAM 228

Query: 326 ELRALKTSQPFYMQL-PATTLTMCPSCERV 349
           ELR LK S  FY Q+ P TTL MCPSCERV
Sbjct: 229 ELRTLKLSPQFYGQMTPPTTLIMCPSCERV 243

The following BLAST results are available for this feature:

BLAST of CsaV3_3G038700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136729.2	2.7e-205	100.00	homeobox-leucine zipper protein HOX11 [Cucumis sativus] >KGN59289.1 hypothetical...	[more]
XP_008443033.1	1.8e-185	94.85	PREDICTED: homeobox-leucine zipper protein HOX11 [Cucumis melo]	[more]
XP_038905251.1	3.0e-143	80.50	homeobox-leucine zipper protein HOX11-like [Benincasa hispida]	[more]
XP_022151365.1	2.2e-114	67.32	homeobox-leucine zipper protein HOX11 isoform X1 [Momordica charantia]	[more]
KAA0043744.1	1.5e-110	93.85	homeobox-leucine zipper protein HOX11 [Cucumis melo var. makuwa] >TYK25388.1 hom...	[more]

BLAST of CsaV3_3G038700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P46665	1.6e-62	47.23	Homeobox-leucine zipper protein HAT14 OS=Arabidopsis thaliana OX=3702 GN=HAT14 P...	[more]
Q67UE2	1.2e-57	54.26	Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
A2YW03	1.5e-57	50.65	Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
Q6YPD0	1.5e-57	50.65	Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
A2Z1U1	2.6e-57	64.62	Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]

BLAST of CsaV3_3G038700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEE1	1.3e-205	100.00	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G800720 PE...	[more]
A0A1S3B7U4	8.9e-186	94.85	homeobox-leucine zipper protein HOX11 OS=Cucumis melo OX=3656 GN=LOC103486752 PE...	[more]
A0A6J1DAZ1	1.1e-114	67.32	homeobox-leucine zipper protein HOX11 isoform X1 OS=Momordica charantia OX=3673 ...	[more]
A0A5A7TK95	7.2e-111	93.85	Homeobox-leucine zipper protein HOX11 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1DDA9	2.7e-110	66.09	homeobox-leucine zipper protein HOX11 isoform X2 OS=Momordica charantia OX=3673 ...	[more]

BLAST of CsaV3_3G038700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06710.1	1.1e-63	47.23	homeobox from Arabidopsis thaliana	[more]
AT2G44910.1	5.9e-49	46.13	homeobox-leucine zipper protein 4	[more]
AT4G37790.1	3.0e-48	61.50	Homeobox-leucine zipper protein family	[more]
AT3G60390.1	5.0e-48	48.06	homeobox-leucine zipper protein 3	[more]
AT5G47370.1	1.9e-47	58.57	Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 297..327
None	No IPR available	GENE3D	1.10.10.60		coord: 239..289 e-value: 1.1E-18 score: 68.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..83
None	No IPR available	PANTHER	PTHR45714	FAMILY NOT NAMED	coord: 67..372
None	No IPR available	PANTHER	PTHR45714:SF37	HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN	coord: 67..372
IPR003106	Leucine zipper, homeobox-associated	SMART	SM00340	halz	coord: 291..334 e-value: 1.2E-25 score: 101.2
IPR003106	Leucine zipper, homeobox-associated	PFAM	PF02183	HALZ	coord: 291..325 e-value: 2.6E-10 score: 40.3
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 233..295 e-value: 3.2E-14 score: 63.2
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 235..289 e-value: 1.3E-14 score: 53.8
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 231..291 score: 16.665388
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 235..292 e-value: 2.0025E-14 score: 65.3424
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 266..289
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 220..292

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G038700.1	CsaV3_3G038700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0043565	sequence-specific DNA binding