CsaV3_3G026460 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G026460
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3: 22559979 .. 22560287 (-)
RNA-Seq ExpressionCsaV3_3G026460
SyntenyCsaV3_3G026460
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAGGAACTTGGCGCAGATGAAACTAGGCAGAAATTGGCTGACGTGTCGCTTGTCGTGAAGCAACTCGACAAACGAACATTTCGAGTAGAGAATGAACACCAACTCGACTTGTTCAAACGTGGGACGAAGGATTGTTCAACATGGCTTGCAACTGGGCTTCGATGGAATGAGAACCGACTCGATCATCAATGGTGAAGCTTGTAGTGATGATCCTCGTTGGGTGGCTAAGGACTTGATCAATGGCAAGTGGCCCTTAGGGTTTTTCTTTCGAAGATGGAGAAGATGGAGAATAAGTGGCACATAA

mRNA sequence

ATGGAGAGGAACTTGGCGCAGATGAAACTAGGCAGAAATTGGCTGACGTGTCGCTTGATTGTTCAACATGGCTTGCAACTGGGCTTCGATGGAATGAGAACCGACTCGATCATCAATGGTGAAGCTTGTAGTGATGATCCTCGTTGGGTGGCTAAGGACTTGATCAATGGCAAGTGGCCCTTAGGGTTTTTCTTTCGAAGATGGAGAAGATGGAGAATAAGTGGCACATAA

Coding sequence (CDS)

ATGGAGAGGAACTTGGCGCAGATGAAACTAGGCAGAAATTGGCTGACGTGTCGCTTGATTGTTCAACATGGCTTGCAACTGGGCTTCGATGGAATGAGAACCGACTCGATCATCAATGGTGAAGCTTGTAGTGATGATCCTCGTTGGGTGGCTAAGGACTTGATCAATGGCAAGTGGCCCTTAGGGTTTTTCTTTCGAAGATGGAGAAGATGGAGAATAAGTGGCACATAA

Protein sequence

MERNLAQMKLGRNWLTCRLIVQHGLQLGFDGMRTDSIINGEACSDDPRWVAKDLINGKWPLGFFFRRWRRWRISGT*
Homology
[Close]
BLAST of CsaV3_3G026460 vs. NCBI nr
Match: KGN58097.1 (hypothetical protein Csa_017604 [Cucumis sativus])

HSP 1 Score: 171.0 bits (432), Expect = 4.0e-39
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 

Query: 1  MERNLAQMKLGRNWLTCRLIVQHGLQLGFDGMRTDSIINGEACSDDPRWVAKDLINGKWP 60
          MERNLAQMKLGRNWLTCRLIVQHGLQLGFDGMRTDSIINGEACSDDPRWVAKDLINGKWP
Sbjct: 1  MERNLAQMKLGRNWLTCRLIVQHGLQLGFDGMRTDSIINGEACSDDPRWVAKDLINGKWP 60

Query: 61 LGFFFRRWRRWRISGT 77
          LGFFFRRWRRWRISGT
Sbjct: 61 LGFFFRRWRRWRISGT 76

[Close]
BLAST of CsaV3_3G026460 vs. ExPASy TrEMBL
Match: A0A0A0LBR4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G509930 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.9e-39
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 

Query: 1  MERNLAQMKLGRNWLTCRLIVQHGLQLGFDGMRTDSIINGEACSDDPRWVAKDLINGKWP 60
          MERNLAQMKLGRNWLTCRLIVQHGLQLGFDGMRTDSIINGEACSDDPRWVAKDLINGKWP
Sbjct: 1  MERNLAQMKLGRNWLTCRLIVQHGLQLGFDGMRTDSIINGEACSDDPRWVAKDLINGKWP 60

Query: 61 LGFFFRRWRRWRISGT 77
          LGFFFRRWRRWRISGT
Sbjct: 61 LGFFFRRWRRWRISGT 76

The following BLAST results are available for this feature:
BLAST of CsaV3_3G026460 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN58097.14.0e-39100.00hypothetical protein Csa_017604 [Cucumis sativus][more]
BLAST of CsaV3_3G026460 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G026460 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBR41.9e-39100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G509930 PE=4 SV=1[more]
BLAST of CsaV3_3G026460 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G026460.1CsaV3_3G026460.1mRNA