CsaV3_3G025030 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGCAGCAGAACATCACAATCCCCAACCAAGTTTCTTCCATCAAATCCTCCCTCCCCGTCTCGAAGACGCCGGCCTCGAGGATTCTGCCCTTCCTCCCGATTCCATTCGCGAAGCCTTCTTCAAGGCCGCCTCCGCCGTCAAATCCAGGGCCACCGCCCGTCTTTCACACTCCGACGACGAGGATGATGATGTTCCATGCTCCCCTACTTCCGCACTACCAACCGACGAGGACGCTCCGGCGATTTGCGCGACGAAGAAGGGATTGGAATTGCCCGAATTCGGTAAAGACGAGGTGGTTATTGGGGGAATGGAGGAAAGGAGAGGGAAGGGTTGTGTGGTAGATGGATTGGAAGGGTTGGAGATTGGCGATGATGCCGAGAAGGAGAGCGGGAAAGAGGAGAAGAAGAAACCTGTCTTAGGCGAAGGTTTCGCTTGAAATTGTATAGATGAGTTTAGGTCATAGTTAGAATGGGGGAGGGCTGTTGTTCTTGAAAAGTTATTGTTTTCACGTTGTTTGTGAATAGAGATGAGTTCTTGATTTTATTTTTCACCAAAAGTATTTTTATTTATTGATCGTAGAGCATATATAGGTTTTAATTTAAACTCGAAACTCCAATGGTTCTTTCAACATTCCTAATCACCTAAATAAATACTTAAAAATTACAATTCATAATCTTTTGCTATTTTTATTGTTGGTTAGAATGTTTATAGTAATTATTTATCTACCAAATATAATAAGCGTAAGTTTAGATTAATTTTTATCTACGATATTATGTTTAACCCGTTTTCGTATACTCAAATCTAATTCTGTAAACATAAAATTATTAGAATGGATCTTAATATATTTTACAAATAATGGGTCAAGATTTTTTCTCTCTTTTAAAAAAGGTGAAGATTGTATTTTGTCATTATTATTTGGTTCAATGAATTACTCTTGTTAACTTAAATACAGCTTCATAATAAATGTCTGTTTATAGGTAATCTATTTTCATAGTAGACATTGAAGATCAATTATATATAGAGAGAGAGAGAAAGAGAGAGAAGGGAATCAAAATATTTTCTAAAAATTTGAGGATTATTCAAAACACTCAACGAACTAAATAGACAAAATAGATAGGGCAATGATGTACTTGTAATATAAGAAGAAGATTTAGTAAACATTAGTGATAGGCAGTAACAAATCATGATTAACATTGATGTGTGTTTTACATGAATCGTAGATTAG ATGGATGCAGCAGAACATCACAATCCCCAACCAAGTTTCTTCCATCAAATCCTCCCTCCCCGTCTCGAAGACGCCGGCCTCGAGGATTCTGCCCTTCCTCCCGATTCCATTCGCGAAGCCTTCTTCAAGGCCGCCTCCGCCGTCAAATCCAGGGCCACCGCCCGTCTTTCACACTCCGACGACGAGGATGATGATGTTCCATGCTCCCCTACTTCCGCACTACCAACCGACGAGGACGCTCCGGCGATTTGCGCGACGAAGAAGGGATTGGAATTGCCCGAATTCGGTAAAGACGAGGTGGTTATTGGGGGAATGGAGGAAAGGAGAGGGAAGGGTTGTGTGGTAGATGGATTGGAAGGGTTGGAGATTGGCGATGATGCCGAGAAGGAGAGCGGGAAAGAGGAGAAGAAGAAACCTGTCTTAGGCGAAGATTAG ATGGATGCAGCAGAACATCACAATCCCCAACCAAGTTTCTTCCATCAAATCCTCCCTCCCCGTCTCGAAGACGCCGGCCTCGAGGATTCTGCCCTTCCTCCCGATTCCATTCGCGAAGCCTTCTTCAAGGCCGCCTCCGCCGTCAAATCCAGGGCCACCGCCCGTCTTTCACACTCCGACGACGAGGATGATGATGTTCCATGCTCCCCTACTTCCGCACTACCAACCGACGAGGACGCTCCGGCGATTTGCGCGACGAAGAAGGGATTGGAATTGCCCGAATTCGGTAAAGACGAGGTGGTTATTGGGGGAATGGAGGAAAGGAGAGGGAAGGGTTGTGTGGTAGATGGATTGGAAGGGTTGGAGATTGGCGATGATGCCGAGAAGGAGAGCGGGAAAGAGGAGAAGAAGAAACCTGTCTTAGGCGAAGATTAG MDAAEHHNPQPSFFHQILPPRLEDAGLEDSALPPDSIREAFFKAASAVKSRATARLSHSDDEDDDVPCSPTSALPTDEDAPAICATKKGLELPEFGKDEVVIGGMEERRGKGCVVDGLEGLEIGDDAEKESGKEEKKKPVLGED* Homology
BLAST of CsaV3_3G025030 vs. NCBI nr
Match: KAE8650731.1 (hypothetical protein Csa_023393 [Cucumis sativus]) HSP 1 Score: 287.3 bits (734), Expect = 7.1e-74 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0
BLAST of CsaV3_3G025030 vs. NCBI nr
Match: XP_011651498.1 (uncharacterized protein LOC105434906 [Cucumis sativus]) HSP 1 Score: 285.4 bits (729), Expect = 2.7e-73 Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0
BLAST of CsaV3_3G025030 vs. NCBI nr
Match: XP_008447517.1 (PREDICTED: uncharacterized protein LOC103489947 [Cucumis melo] >KAA0050786.1 uncharacterized protein E6C27_scaffold404G00370 [Cucumis melo var. makuwa] >TYK08560.1 uncharacterized protein E5676_scaffold323G001030 [Cucumis melo var. makuwa]) HSP 1 Score: 228.0 bits (580), Expect = 5.1e-56 Identity = 125/153 (81.70%), Postives = 132/153 (86.27%), Query Frame = 0
BLAST of CsaV3_3G025030 vs. NCBI nr
Match: XP_038900451.1 (uncharacterized protein LOC120087668 [Benincasa hispida]) HSP 1 Score: 205.3 bits (521), Expect = 3.6e-49 Identity = 115/152 (75.66%), Postives = 122/152 (80.26%), Query Frame = 0
BLAST of CsaV3_3G025030 vs. NCBI nr
Match: KAG6606765.1 (hypothetical protein SDJN03_00107, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 179.5 bits (454), Expect = 2.1e-41 Identity = 101/157 (64.33%), Postives = 115/157 (73.25%), Query Frame = 0
BLAST of CsaV3_3G025030 vs. ExPASy TrEMBL
Match: A0A0A0LDD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G483800 PE=4 SV=1) HSP 1 Score: 285.4 bits (729), Expect = 1.3e-73 Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0
BLAST of CsaV3_3G025030 vs. ExPASy TrEMBL
Match: A0A5A7U9B5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G001030 PE=4 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 2.5e-56 Identity = 125/153 (81.70%), Postives = 132/153 (86.27%), Query Frame = 0
BLAST of CsaV3_3G025030 vs. ExPASy TrEMBL
Match: A0A1S3BI85 (uncharacterized protein LOC103489947 OS=Cucumis melo OX=3656 GN=LOC103489947 PE=4 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 2.5e-56 Identity = 125/153 (81.70%), Postives = 132/153 (86.27%), Query Frame = 0
BLAST of CsaV3_3G025030 vs. ExPASy TrEMBL
Match: A0A6J1GBZ4 (uncharacterized protein LOC111452587 OS=Cucurbita moschata OX=3662 GN=LOC111452587 PE=4 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 1.7e-41 Identity = 101/157 (64.33%), Postives = 115/157 (73.25%), Query Frame = 0
BLAST of CsaV3_3G025030 vs. ExPASy TrEMBL
Match: A0A6J1K989 (uncharacterized protein LOC111492831 OS=Cucurbita maxima OX=3661 GN=LOC111492831 PE=4 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 1.7e-36 Identity = 91/143 (63.64%), Postives = 102/143 (71.33%), Query Frame = 0
BLAST of CsaV3_3G025030 vs. TAIR 10
Match: AT1G15230.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 26 Blast hits to 26 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 72.0 bits (175), Expect = 4.4e-13 Identity = 58/141 (41.13%), Postives = 80/141 (56.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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