CsaV3_3G020490 (gene) Cucumber (Chinese Long) v3

InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Position :
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ATGGTTCAGCAGACTAATGCATCCAAATTGAGATGGGGGGAGCTTGAAGATGACGATGGGGATCTAGATTTTCTTCTTCCTCCAAAGCAAATTATCGGGCCAGACGAAAATGGGTTGAAGAAAATTGTTGAGTATCAGTTTAACGAAGATGGTAACAAGGTCAAAATCACAACGACAACTCGTACACGCAAGCTCGCCCATGCTCGCCTTAGTAAACATGCGGTAGAGCGCCGTTCTTGGGCAAAGTTCGGCGATGCTGTCCATGAAGACGTCGGCAGTCGGCTCACTATGGTCTCCACTGAGGAGATTCTTCTCGAGCGCCCTCGTGCTCCTGGTAGCAAACCAGAGGAGCCCAAGGTTGCTGGTGACCCGCTAGCTCAACTTGGAAAAGGGGGAGCTGTTCTTATGGTCTGTCGAACTTGTGGTAAAAAGGGTGACCACTGGACCTCAAGGTGCCCTTACAAAGACCTGGCACCACAAGCTGATGGATTGGATAAGCCTGTTGCACCAGAGACTACAGCTGCTGCTCCTGGTGCAACAAAGGGAGCGTATGTTCCTCCAGGTATGAGAGCAGGGGCGGAGAGGACTGGAACTGACATGAGGCGTAGGAATGATGAAAACTCTGTACGTGTTACCAATCTTTCGGAGGACACTAGGGAACCTGACTTGCTTGAGCTCTTCCGACCTTTTGGTGCTGTTAGCCGAGTTTATGTTGCTGTTGATCAAAAGAATGGCATGAGCAGAGGATTTGGTTTTGTAAACTTTGTGAATCGTGAGGATGCACAAAGATCAATTAACAAGCTTAATGGATATGGTTACGATAATCTCATCCTTAGAGTTGAGTGGGCCACTCCTAGGGCGACTTAA100200300400500600700800Expect = 1.8E-21 / Score = 87.3Expect = 2.8E-18 / Score = 65.5Score = 18.393282Expect = 7.7E-88 / Score = 292.5Score = 28.038359Expect = 4.0E-34 / Score = 117.7Expect = 1.12481E-35 / Score = 122.393Expect = 8.3E-25 / Score = 89.5Score = Score = Expect = 7.35956E-44 / Score = 142.293Score = SequenceSM00360PF00076PS50102PIRSF037949MF_03006PF12353cd12933G3DSA:3.30.70.330PTHR10352:SF34PTHR10352cd12408SSF54928
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 208..281
e-value: 1.8E-21
score: 87.3
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 209..275
e-value: 2.8E-18
score: 65.5
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 207..285
score: 18.393282
IPR017334Eukaryotic translation initiation factor 3 subunit GPIRSFPIRSF037949Transl_init_eIF-3_RNA-bindcoord: 1..288
e-value: 7.7E-88
score: 292.5
IPR017334Eukaryotic translation initiation factor 3 subunit GHAMAPMF_03006eIF3gcoord: 9..287
score: 28.038359
IPR024675Eukaryotic translation initiation factor 3 subunit G, N-terminalPFAMPF12353eIF3gcoord: 31..157
e-value: 4.0E-34
score: 117.7
IPR024675Eukaryotic translation initiation factor 3 subunit G, N-terminalCDDcd12933eIF3Gcoord: 37..156
e-value: 1.12481E-35
score: 122.393
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 179..288
e-value: 8.3E-25
score: 89.5
NoneNo IPR availablePANTHERPTHR10352:SF34EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Gcoord: 7..287
NoneNo IPR availablePANTHERPTHR10352EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Gcoord: 7..287
IPR034240eIF3G, RNA recognition motifCDDcd12408RRM_eIF3G_likecoord: 208..283
e-value: 7.35956E-44
score: 142.293
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 205..286