CsaV3_3G000220 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_3G000220
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	C2H2-type domain-containing protein
Location	chr3: 313205 .. 313933 (+)
RNA-Seq Expression	CsaV3_3G000220
Synteny	CsaV3_3G000220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAGAACACCAACACAAATGCCAATACCAATATCAATATCAACATTGATGCGGTATCCGAGACCTCTCCCGACCAACGCCACCGTCGAGAAAGGTCTCCAATGGCAGCTTCTCCACCACCACCTGCTCGCATTATCGATGACATAAATAACCCTCCCACTGATGTCATCGAACCCTCGTCCTCGATAGTAGTGGCGGCCCCGGAAAGCGTTACACCAGGCGACGTAAGACGGCGCCAAAGTGTAAACGCAATGTTCGACGTCGGAACATCATCACACGAGCACGTTGGAGGAAGTTCCGACGTCGAAGCGGGGAAAAAAAGAGGACGAGGGGATGGAGGAGAGCAGCAGCAGCAGGTGAAAGCTGCAAAGAAAAAAGGAGAGCTAACGGAGGTTCCAAAGGGTGAGCCAAGATGTGCAACATGTAACAAAGTGTTCAAATCGTGGAAAGCACTATTTGGACACTTAAGGTCTCACCCTGAACGGACCTACCGTGGAGCTCTTCCTCCGCCAACCGCCGCCGAACTTGACATTCGCCGTTGTCAGCAGCAGCTCGCTTCCACTTTGCTGACAGTAGCTCAGCAAGTGTCAGCGTCCAGAAGAGGGCTGGATATTGATCTCAACCAACCCTCTACTGCTGACGACGGTGACTCGCCGGACAACACCAGAGACGCCGGGTTTGATCTGAACCTCGAACCCCCGCCGGAGAGTGACGACGAGAAGTGA

mRNA sequence

ATGGAGAAGAACACCAACACAAATGCCAATACCAATATCAATATCAACATTGATGCGGTATCCGAGACCTCTCCCGACCAACGCCACCGTCGAGAAAGGTCTCCAATGGCAGCTTCTCCACCACCACCTGCTCGCATTATCGATGACATAAATAACCCTCCCACTGATGTCATCGAACCCTCGTCCTCGATAGTAGTGGCGGCCCCGGAAAGCGTTACACCAGGCGACGTAAGACGGCGCCAAAGTGTAAACGCAATGTTCGACGTCGGAACATCATCACACGAGCACGTTGGAGGAAGTTCCGACGTCGAAGCGGGGAAAAAAAGAGGACGAGGGGATGGAGGAGAGCAGCAGCAGCAGGTGAAAGCTGCAAAGAAAAAAGGAGAGCTAACGGAGGTTCCAAAGGGTGAGCCAAGATGTGCAACATGTAACAAAGTGTTCAAATCGTGGAAAGCACTATTTGGACACTTAAGGTCTCACCCTGAACGGACCTACCGTGGAGCTCTTCCTCCGCCAACCGCCGCCGAACTTGACATTCGCCGTTGTCAGCAGCAGCTCGCTTCCACTTTGCTGACAGTAGCTCAGCAAGTGTCAGCGTCCAGAAGAGGGCTGGATATTGATCTCAACCAACCCTCTACTGCTGACGACGGTGACTCGCCGGACAACACCAGAGACGCCGGGTTTGATCTGAACCTCGAACCCCCGCCGGAGAGTGACGACGAGAAGTGA

Coding sequence (CDS)

ATGGAGAAGAACACCAACACAAATGCCAATACCAATATCAATATCAACATTGATGCGGTATCCGAGACCTCTCCCGACCAACGCCACCGTCGAGAAAGGTCTCCAATGGCAGCTTCTCCACCACCACCTGCTCGCATTATCGATGACATAAATAACCCTCCCACTGATGTCATCGAACCCTCGTCCTCGATAGTAGTGGCGGCCCCGGAAAGCGTTACACCAGGCGACGTAAGACGGCGCCAAAGTGTAAACGCAATGTTCGACGTCGGAACATCATCACACGAGCACGTTGGAGGAAGTTCCGACGTCGAAGCGGGGAAAAAAAGAGGACGAGGGGATGGAGGAGAGCAGCAGCAGCAGGTGAAAGCTGCAAAGAAAAAAGGAGAGCTAACGGAGGTTCCAAAGGGTGAGCCAAGATGTGCAACATGTAACAAAGTGTTCAAATCGTGGAAAGCACTATTTGGACACTTAAGGTCTCACCCTGAACGGACCTACCGTGGAGCTCTTCCTCCGCCAACCGCCGCCGAACTTGACATTCGCCGTTGTCAGCAGCAGCTCGCTTCCACTTTGCTGACAGTAGCTCAGCAAGTGTCAGCGTCCAGAAGAGGGCTGGATATTGATCTCAACCAACCCTCTACTGCTGACGACGGTGACTCGCCGGACAACACCAGAGACGCCGGGTTTGATCTGAACCTCGAACCCCCGCCGGAGAGTGACGACGAGAAGTGA

Protein sequence

MEKNTNTNANTNININIDAVSETSPDQRHRRERSPMAASPPPPARIIDDINNPPTDVIEPSSSIVVAAPESVTPGDVRRRQSVNAMFDVGTSSHEHVGGSSDVEAGKKRGRGDGGEQQQQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLTVAQQVSASRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPESDDEK*

Homology

[Close]

BLAST of CsaV3_3G000220 vs. NCBI nr
Match: XP_011652703.1 (uncharacterized protein LOC105435052 [Cucumis sativus] >KGN55600.1 hypothetical protein Csa_009908 [Cucumis sativus])

HSP 1 Score: 467.6 bits (1202), Expect = 6.5e-128
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0


Query: 1   MEKNTNTNANTNININIDAVSETSPDQRHRRERSPMAASPPPPARIIDDINNPPTDVIEP 60
           MEKNTNTNANTNININIDAVSETSPDQRHRRERSPMAASPPPPARIIDDINNPPTDVIEP
Sbjct: 1   MEKNTNTNANTNININIDAVSETSPDQRHRRERSPMAASPPPPARIIDDINNPPTDVIEP 60

Query: 61  SSSIVVAAPESVTPGDVRRRQSVNAMFDVGTSSHEHVGGSSDVEAGKKRGRGDGGEQQQQ 120
           SSSIVVAAPESVTPGDVRRRQSVNAMFDVGTSSHEHVGGSSDVEAGKKRGRGDGGEQQQQ
Sbjct: 61  SSSIVVAAPESVTPGDVRRRQSVNAMFDVGTSSHEHVGGSSDVEAGKKRGRGDGGEQQQQ 120

Query: 121 VKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIR 180
           VKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIR
Sbjct: 121 VKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIR 180

Query: 181 RCQQQLASTLLTVAQQVSASRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPESDD 240
           RCQQQLASTLLTVAQQVSASRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPESDD
Sbjct: 181 RCQQQLASTLLTVAQQVSASRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPESDD 240

Query: 241 EK 243
           EK
Sbjct: 241 EK 242

[Close]

BLAST of CsaV3_3G000220 vs. NCBI nr
Match: XP_008449156.1 (PREDICTED: uncharacterized protein LOC103491103 [Cucumis melo] >KAA0052913.1 zinc finger family protein [Cucumis melo var. makuwa] >TYK11366.1 zinc finger family protein [Cucumis melo var. makuwa])

HSP 1 Score: 441.8 bits (1135), Expect = 3.8e-120
Identity = 230/242 (95.04%), Postives = 234/242 (96.69%), Query Frame = 0


Query: 1   MEKNTNTNANTNININIDAVSETSPDQRHRRERSPMAASPPPPARIIDDINNPPTDVIEP 60
           MEKNTNTNANTNININIDAVSETSPDQRH  ERSPMAASP PPAR IDDINNPPT VIEP
Sbjct: 1   MEKNTNTNANTNININIDAVSETSPDQRHGGERSPMAASPLPPARNIDDINNPPTVVIEP 60

Query: 61  SSSIVVAAPESVTPGDVRRRQSVNAMFDVGTSSHEHVGGSSDVEAGKKRGRGDGGEQQQQ 120
           SSS +VAAPES TPGDVRRRQSV+AMFDVGTSSHEHVGGSSD EAGKKRGRGDGGEQQQQ
Sbjct: 61  SSSTLVAAPESATPGDVRRRQSVDAMFDVGTSSHEHVGGSSDAEAGKKRGRGDGGEQQQQ 120

Query: 121 VKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIR 180
           VKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIR
Sbjct: 121 VKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIR 180

Query: 181 RCQQQLASTLLTVAQQVSASRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPESDD 240
           RCQQQLASTLLTVAQQV+A+RRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPESDD
Sbjct: 181 RCQQQLASTLLTVAQQVAATRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPESDD 240

Query: 241 EK 243
           EK
Sbjct: 241 EK 242

[Close]

BLAST of CsaV3_3G000220 vs. NCBI nr
Match: XP_038876670.1 (uncharacterized protein LOC120069065 [Benincasa hispida])

HSP 1 Score: 335.5 bits (859), Expect = 3.8e-88
Identity = 190/245 (77.55%), Postives = 208/245 (84.90%), Query Frame = 0


Query: 1   MEKNTNTNANTNININIDAVSETSPDQRHRRERSPM-AASPPPPARIIDDINNP-PTDVI 60
           MEKNTNTNAN N N N   VSETSPDQ H  ER+P+ A SP PPAR  D++NNP PT VI
Sbjct: 1   MEKNTNTNANANANTN--TVSETSPDQHHDGERTPITATSPLPPAR-NDNVNNPTPTVVI 60

Query: 61  EPSSSIVVAAPESVTPGDVRRRQSVNA-MFDVGTSSHEHVGGSSDVEAGKKRGRGDGGEQ 120
           E SSSIVVAAPES T GD RRRQ V+A + DV TSSHE++GGSS++E GKKRG+GDG EQ
Sbjct: 61  ELSSSIVVAAPESATTGDSRRRQIVDATLLDVETSSHEYIGGSSNIEQGKKRGKGDGEEQ 120

Query: 121 QQQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAEL 180
           QQQV+ AKKKGELTEVPKGEP+CATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAEL
Sbjct: 121 QQQVRVAKKKGELTEVPKGEPKCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAEL 180

Query: 181 DIRRCQQQLASTLLTVAQQVSASRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPE 240
           DI    QQLASTLLTVAQQV+ASRRGLDIDLNQPSTADDGD P+ T   GFDLN++PP +
Sbjct: 181 DI---HQQLASTLLTVAQQVAASRRGLDIDLNQPSTADDGDLPEKTGGVGFDLNIKPPSD 239

Query: 241 SDDEK 243
           SDDEK
Sbjct: 241 SDDEK 239

[Close]

BLAST of CsaV3_3G000220 vs. NCBI nr
Match: XP_022923503.1 (uncharacterized protein LOC111431177 [Cucurbita moschata])

HSP 1 Score: 303.5 bits (776), Expect = 1.6e-78
Identity = 172/245 (70.20%), Postives = 189/245 (77.14%), Query Frame = 0


Query: 1   MEKNTNTNANTNININID---AVSETSPDQRHRRERSPMAASPPPPARIIDDINNPPTDV 60
           MEKNTN NAN NIN++ D       TSPDQRH RE SPMA SPPP +  IDD NNP   V
Sbjct: 1   MEKNTNANANPNINVDADINTIPESTSPDQRHGRETSPMAVSPPPAS--IDD-NNPTPPV 60

Query: 61  IEPSSSIVVAAPESVTPGDVRRRQSVNAMFDVGTSSHEHVGGSSDVEAGKKRGRGDGGEQ 120
           I  SS  V  APE  T GDV    S         S+H HVGG S+ E GKKRGRGDGGEQ
Sbjct: 61  INLSS--VAPAPERATTGDVGTSSS---------STHGHVGGGSNTEVGKKRGRGDGGEQ 120

Query: 121 QQQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAEL 180
           QQQVKAAKKKGELTEVPKG+P+CATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAEL
Sbjct: 121 QQQVKAAKKKGELTEVPKGDPKCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAEL 180

Query: 181 DIRRCQQQLASTLLTVAQQVSASRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPE 240
           DIR CQQQ ASTLLTVAQ V+ASRRGLDIDLNQPS A++ +SP+ +   GFDLN+E PPE
Sbjct: 181 DIRHCQQQFASTLLTVAQGVAASRRGLDIDLNQPSAAEESESPEKSGGVGFDLNVEQPPE 231

Query: 241 SDDEK 243
           SD+++
Sbjct: 241 SDNDE 231

[Close]

BLAST of CsaV3_3G000220 vs. NCBI nr
Match: XP_023552101.1 (uncharacterized protein LOC111809870 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.4 bits (773), Expect = 3.6e-78
Identity = 171/245 (69.80%), Postives = 190/245 (77.55%), Query Frame = 0


Query: 1   MEKNTNTNANTNININID---AVSETSPDQRHRRERSPMAASPPPPARIIDDINNPPTDV 60
           MEKNTN NAN NIN++ D       TSPDQRH RE SPMA SPPP +  IDD N+P   V
Sbjct: 1   MEKNTNANANANINVDADINTVPESTSPDQRHGRETSPMAVSPPPAS--IDD-NSPTPPV 60

Query: 61  IEPSSSIVVAAPESVTPGDVRRRQSVNAMFDVGTSSHEHVGGSSDVEAGKKRGRGDGGEQ 120
           I  SS  V  APE  T GDV    S        +S+H HVGG S+ E GKKRGRGDGGEQ
Sbjct: 61  INLSS--VAPAPERATTGDVGTSSS--------SSTHGHVGGGSNKEVGKKRGRGDGGEQ 120

Query: 121 QQQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAEL 180
           QQQVKAAKKKGELTEVPKG+P+CATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAEL
Sbjct: 121 QQQVKAAKKKGELTEVPKGDPKCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAEL 180

Query: 181 DIRRCQQQLASTLLTVAQQVSASRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPE 240
           DIR CQQQ ASTLLTVAQ V+ASRRGLDIDLNQPS A++ +SP+ +   GFDLN+E PPE
Sbjct: 181 DIRHCQQQFASTLLTVAQGVAASRRGLDIDLNQPSAAEESESPEKSGGVGFDLNVEQPPE 232

Query: 241 SDDEK 243
           SD+++
Sbjct: 241 SDNDE 232

[Close]

BLAST of CsaV3_3G000220 vs. ExPASy Swiss-Prot
Match: O65499 (Zinc finger protein ZAT3 OS=Arabidopsis thaliana OX=3702 GN=ZAT3 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.1e-05
Identity = 32/80 (40.00%), Postives = 38/80 (47.50%), Query Frame = 0


Query: 97  VGGSSDVEAGKKRGRGDGGEQQQQVKAAKK----KGELTEVPKGEPRCATCNKVFKSWKA 156
           +  S D    KKR +          K+A K    K      PK    C  C + F SWKA
Sbjct: 32  LSSSYDHSPKKKRTKTVASSSSSSPKSASKPKYTKKPDPNAPKITRPCTECGRKFWSWKA 91

Query: 157 LFGHLRSHPERTYRGALPPP 173
           LFGH+R HPER +RG  PPP
Sbjct: 92  LFGHMRCHPERQWRGINPPP 111

[Close]

BLAST of CsaV3_3G000220 vs. ExPASy Swiss-Prot
Match: Q9SIJ0 (Zinc finger protein ZAT2 OS=Arabidopsis thaliana OX=3702 GN=ZAT2 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 9.4e-05
Identity = 20/32 (62.50%), Postives = 22/32 (68.75%), Query Frame = 0


Query: 140 CATCNKVFKSWKALFGHLRSHPERTYRGALPP 172
           C  C K F S KALFGH+R HPER +RG  PP
Sbjct: 67  CTECGKQFGSLKALFGHMRCHPERQWRGINPP 98

[Close]

BLAST of CsaV3_3G000220 vs. ExPASy TrEMBL
Match: A0A0A0L0X7 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G001720 PE=4 SV=1)

HSP 1 Score: 467.6 bits (1202), Expect = 3.1e-128
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0


Query: 1   MEKNTNTNANTNININIDAVSETSPDQRHRRERSPMAASPPPPARIIDDINNPPTDVIEP 60
           MEKNTNTNANTNININIDAVSETSPDQRHRRERSPMAASPPPPARIIDDINNPPTDVIEP
Sbjct: 1   MEKNTNTNANTNININIDAVSETSPDQRHRRERSPMAASPPPPARIIDDINNPPTDVIEP 60

Query: 61  SSSIVVAAPESVTPGDVRRRQSVNAMFDVGTSSHEHVGGSSDVEAGKKRGRGDGGEQQQQ 120
           SSSIVVAAPESVTPGDVRRRQSVNAMFDVGTSSHEHVGGSSDVEAGKKRGRGDGGEQQQQ
Sbjct: 61  SSSIVVAAPESVTPGDVRRRQSVNAMFDVGTSSHEHVGGSSDVEAGKKRGRGDGGEQQQQ 120

Query: 121 VKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIR 180
           VKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIR
Sbjct: 121 VKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIR 180

Query: 181 RCQQQLASTLLTVAQQVSASRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPESDD 240
           RCQQQLASTLLTVAQQVSASRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPESDD
Sbjct: 181 RCQQQLASTLLTVAQQVSASRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPESDD 240

Query: 241 EK 243
           EK
Sbjct: 241 EK 242

[Close]

BLAST of CsaV3_3G000220 vs. ExPASy TrEMBL
Match: A0A5D3CLS0 (Zinc finger family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00180 PE=4 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 1.8e-120
Identity = 230/242 (95.04%), Postives = 234/242 (96.69%), Query Frame = 0


Query: 1   MEKNTNTNANTNININIDAVSETSPDQRHRRERSPMAASPPPPARIIDDINNPPTDVIEP 60
           MEKNTNTNANTNININIDAVSETSPDQRH  ERSPMAASP PPAR IDDINNPPT VIEP
Sbjct: 1   MEKNTNTNANTNININIDAVSETSPDQRHGGERSPMAASPLPPARNIDDINNPPTVVIEP 60

Query: 61  SSSIVVAAPESVTPGDVRRRQSVNAMFDVGTSSHEHVGGSSDVEAGKKRGRGDGGEQQQQ 120
           SSS +VAAPES TPGDVRRRQSV+AMFDVGTSSHEHVGGSSD EAGKKRGRGDGGEQQQQ
Sbjct: 61  SSSTLVAAPESATPGDVRRRQSVDAMFDVGTSSHEHVGGSSDAEAGKKRGRGDGGEQQQQ 120

Query: 121 VKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIR 180
           VKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIR
Sbjct: 121 VKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIR 180

Query: 181 RCQQQLASTLLTVAQQVSASRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPESDD 240
           RCQQQLASTLLTVAQQV+A+RRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPESDD
Sbjct: 181 RCQQQLASTLLTVAQQVAATRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPESDD 240

Query: 241 EK 243
           EK
Sbjct: 241 EK 242

[Close]

BLAST of CsaV3_3G000220 vs. ExPASy TrEMBL
Match: A0A1S3BLF2 (uncharacterized protein LOC103491103 OS=Cucumis melo OX=3656 GN=LOC103491103 PE=4 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 1.8e-120
Identity = 230/242 (95.04%), Postives = 234/242 (96.69%), Query Frame = 0


Query: 1   MEKNTNTNANTNININIDAVSETSPDQRHRRERSPMAASPPPPARIIDDINNPPTDVIEP 60
           MEKNTNTNANTNININIDAVSETSPDQRH  ERSPMAASP PPAR IDDINNPPT VIEP
Sbjct: 1   MEKNTNTNANTNININIDAVSETSPDQRHGGERSPMAASPLPPARNIDDINNPPTVVIEP 60

Query: 61  SSSIVVAAPESVTPGDVRRRQSVNAMFDVGTSSHEHVGGSSDVEAGKKRGRGDGGEQQQQ 120
           SSS +VAAPES TPGDVRRRQSV+AMFDVGTSSHEHVGGSSD EAGKKRGRGDGGEQQQQ
Sbjct: 61  SSSTLVAAPESATPGDVRRRQSVDAMFDVGTSSHEHVGGSSDAEAGKKRGRGDGGEQQQQ 120

Query: 121 VKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIR 180
           VKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIR
Sbjct: 121 VKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIR 180

Query: 181 RCQQQLASTLLTVAQQVSASRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPESDD 240
           RCQQQLASTLLTVAQQV+A+RRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPESDD
Sbjct: 181 RCQQQLASTLLTVAQQVAATRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPESDD 240

Query: 241 EK 243
           EK
Sbjct: 241 EK 242

[Close]

BLAST of CsaV3_3G000220 vs. ExPASy TrEMBL
Match: A0A6J1E9T9 (uncharacterized protein LOC111431177 OS=Cucurbita moschata OX=3662 GN=LOC111431177 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 7.8e-79
Identity = 172/245 (70.20%), Postives = 189/245 (77.14%), Query Frame = 0


Query: 1   MEKNTNTNANTNININID---AVSETSPDQRHRRERSPMAASPPPPARIIDDINNPPTDV 60
           MEKNTN NAN NIN++ D       TSPDQRH RE SPMA SPPP +  IDD NNP   V
Sbjct: 1   MEKNTNANANPNINVDADINTIPESTSPDQRHGRETSPMAVSPPPAS--IDD-NNPTPPV 60

Query: 61  IEPSSSIVVAAPESVTPGDVRRRQSVNAMFDVGTSSHEHVGGSSDVEAGKKRGRGDGGEQ 120
           I  SS  V  APE  T GDV    S         S+H HVGG S+ E GKKRGRGDGGEQ
Sbjct: 61  INLSS--VAPAPERATTGDVGTSSS---------STHGHVGGGSNTEVGKKRGRGDGGEQ 120

Query: 121 QQQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAEL 180
           QQQVKAAKKKGELTEVPKG+P+CATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAEL
Sbjct: 121 QQQVKAAKKKGELTEVPKGDPKCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAEL 180

Query: 181 DIRRCQQQLASTLLTVAQQVSASRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPE 240
           DIR CQQQ ASTLLTVAQ V+ASRRGLDIDLNQPS A++ +SP+ +   GFDLN+E PPE
Sbjct: 181 DIRHCQQQFASTLLTVAQGVAASRRGLDIDLNQPSAAEESESPEKSGGVGFDLNVEQPPE 231

Query: 241 SDDEK 243
           SD+++
Sbjct: 241 SDNDE 231

[Close]

BLAST of CsaV3_3G000220 vs. ExPASy TrEMBL
Match: A0A6J1L5G4 (uncharacterized protein LOC111500193 OS=Cucurbita maxima OX=3661 GN=LOC111500193 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 8.9e-75
Identity = 168/242 (69.42%), Postives = 183/242 (75.62%), Query Frame = 0


Query: 1   MEKNTNTNANTNININIDAVSETSPDQRHRRERSPMAASPPPPARIIDDINNPPTDVIEP 60
           MEKNTN NA+ N          TSPDQRH  ERSPMA SPPP +  IDD NNP   VI  
Sbjct: 1   MEKNTNANADIN-----TVPESTSPDQRHGGERSPMAVSPPPAS--IDD-NNPTPPVINL 60

Query: 61  SSSIVVAAPESVTPGDVRRRQSVNAMFDVGTSSHEHVGGSSDVEAGKKRGRGDGGEQQQQ 120
           SS  V  APE  T GDV    S         SSH HVGG S+ E GKKRGRGDGGEQQQQ
Sbjct: 61  SS--VAPAPERGTTGDVGVSSS---------SSHGHVGGGSNTEVGKKRGRGDGGEQQQQ 120

Query: 121 VKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIR 180
           VKAAKKKGELTEVPKG+P+CATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIR
Sbjct: 121 VKAAKKKGELTEVPKGDPKCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIR 180

Query: 181 RCQQQLASTLLTVAQQVSASRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPESDD 240
            CQQQ ASTLLTVAQ V+ASRRGLDIDLNQPS A++  SP+ +   GFDLN+E PPES++
Sbjct: 181 HCQQQFASTLLTVAQGVAASRRGLDIDLNQPSAAEESGSPEKSGGVGFDLNVEQPPESEN 223

Query: 241 EK 243
           ++
Sbjct: 241 DE 223

[Close]

BLAST of CsaV3_3G000220 vs. TAIR 10
Match: AT4G35700.1 (zinc finger (C2H2 type) family protein )

HSP 1 Score: 72.8 bits (177), Expect = 4.3e-13
Identity = 57/151 (37.75%), Postives = 71/151 (47.02%), Query Frame = 0


Query: 121 VKAAKKKG--ELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPT--AAE 180
           VK  +KKG  +LT +P+G P C  C K F SWKA+FGHLR H +R Y G LPPPT  AAE
Sbjct: 123 VKKPRKKGSTQLTHLPQGPPMCNVCGKGFASWKAVFGHLRQHKDRGYLGFLPPPTFNAAE 182

Query: 181 LDI----RRCQQQLASTLLTVAQQVSASRRG------------------LDIDLNQPSTA 240
                          +T ++V +  +AS  G                    IDLN    A
Sbjct: 183 EGFGGVATASTGGAVATAISVGEVPTASSAGGLATASSDGEGLVSSIGRARIDLN----A 242

Query: 241 DDGDSPDNTRDAG----FDLNLEPPPESDDE 242
           D  +  D     G    FDLN  PPP+ D+E
Sbjct: 243 DPVEEEDKVIGVGSKRKFDLNRSPPPDGDEE 269

[Close]

BLAST of CsaV3_3G000220 vs. TAIR 10
Match: AT4G35610.1 (zinc finger (C2H2 type) family protein )

HSP 1 Score: 72.4 bits (176), Expect = 5.6e-13
Identity = 55/150 (36.67%), Postives = 76/150 (50.67%), Query Frame = 0


Query: 106 GKKRGR----------GDGGEQQQQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFG 165
           GKK+ R          GDG  + +  K  KK  ELT  PKG P C  C + F SWKA+FG
Sbjct: 96  GKKKSRPRISTQTDDEGDGLGEGEAKKPKKKAKELTHPPKGPPVCHICGRGFGSWKAVFG 155

Query: 166 HLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLTVAQQVSASRRGLDI---DLNQPS 225
           H+R+H +R Y+G LPPPT +    R     L S   T+A     S  G+ +        S
Sbjct: 156 HMRAHRDRNYQGFLPPPTFSAGAERFVIPGLRSA-FTIATVGGGSSGGVAVGGRSSGDFS 215

Query: 226 TADDGDSP--DNTRDAGFDLNLEPPPESDD 241
            +  GD+P  +  R +G DLN+EP  + ++
Sbjct: 216 GSGGGDAPGSEGGRGSGIDLNVEPVEQVEE 244

[Close]

BLAST of CsaV3_3G000220 vs. TAIR 10
Match: AT4G35280.1 (C2H2-like zinc finger protein )

HSP 1 Score: 52.0 bits (123), Expect = 7.9e-07
Identity = 32/80 (40.00%), Postives = 38/80 (47.50%), Query Frame = 0


Query: 97  VGGSSDVEAGKKRGRGDGGEQQQQVKAAKK----KGELTEVPKGEPRCATCNKVFKSWKA 156
           +  S D    KKR +          K+A K    K      PK    C  C + F SWKA
Sbjct: 32  LSSSYDHSPKKKRTKTVASSSSSSPKSASKPKYTKKPDPNAPKITRPCTECGRKFWSWKA 91

Query: 157 LFGHLRSHPERTYRGALPPP 173
           LFGH+R HPER +RG  PPP
Sbjct: 92  LFGHMRCHPERQWRGINPPP 111

[Close]

BLAST of CsaV3_3G000220 vs. TAIR 10
Match: AT2G26940.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 47.4 bits (111), Expect = 1.9e-05
Identity = 29/102 (28.43%), Postives = 51/102 (50.00%), Query Frame = 0


Query: 92  SSHEHVGGSSDVEAGKKRGRGDGGEQQQQVKAAKKKGELTEVPK--------------GE 151
           SS +  GG   + + +   +G   + ++     KKK ++  V K              G+
Sbjct: 59  SSGKAYGGHVRIHSIEYNNKGKMKKMKKMKLKKKKKRKIGLVKKEKEKEIDLARTDVEGK 118

Query: 152 PRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDI 180
            RC  C K F++  +LFGH+R HP+RT++G  PPP + + ++
Sbjct: 119 IRCCLCGKEFQTMHSLFGHMRRHPDRTWKGIRPPPPSEKFNL 160

[Close]

BLAST of CsaV3_3G000220 vs. TAIR 10
Match: AT5G56200.1 (C2H2 type zinc finger transcription factor family )

HSP 1 Score: 44.3 bits (103), Expect = 1.6e-04
Identity = 43/143 (30.07%), Postives = 63/143 (44.06%), Query Frame = 0


Query: 104 EAGKK--RGRGDGGEQQQQVKAAKK---------KGELTEVPKG--EPRCATCNKVFKSW 163
           E GK+   G+  GG ++  V   +K          G +    +G  E  C  C K F S 
Sbjct: 83  ECGKRFVSGKALGGHKRIHVLETRKFSMMRPKMVSGMVGRSERGDLEVACCVCYKKFTSM 142

Query: 164 KALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLTVAQQVSASRRGLDIDLNQ 223
           KAL+GH+R HP+R ++G LPPP      +       +S+ L    +  +S    D D + 
Sbjct: 143 KALYGHMRFHPDRGWKGVLPPPPLLPHPLGNS----SSSTLDHDDEFISSDYDDDDDFD- 202

Query: 224 PSTADDGDSPDNTRDAGFDLNLE 234
               DD D  D+     +D NLE
Sbjct: 203 ----DDDDDDDDENSELWDSNLE 216

The following BLAST results are available for this feature:

BLAST of CsaV3_3G000220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652703.1	6.5e-128	100.00	uncharacterized protein LOC105435052 [Cucumis sativus] >KGN55600.1 hypothetical ...	[more]
XP_008449156.1	3.8e-120	95.04	PREDICTED: uncharacterized protein LOC103491103 [Cucumis melo] >KAA0052913.1 zin...	[more]
XP_038876670.1	3.8e-88	77.55	uncharacterized protein LOC120069065 [Benincasa hispida]	[more]
XP_022923503.1	1.6e-78	70.20	uncharacterized protein LOC111431177 [Cucurbita moschata]	[more]
XP_023552101.1	3.6e-78	69.80	uncharacterized protein LOC111809870 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_3G000220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65499	1.1e-05	40.00	Zinc finger protein ZAT3 OS=Arabidopsis thaliana OX=3702 GN=ZAT3 PE=1 SV=1	[more]
Q9SIJ0	9.4e-05	62.50	Zinc finger protein ZAT2 OS=Arabidopsis thaliana OX=3702 GN=ZAT2 PE=1 SV=1	[more]

BLAST of CsaV3_3G000220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0X7	3.1e-128	100.00	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G001720 P...	[more]
A0A5D3CLS0	1.8e-120	95.04	Zinc finger family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3BLF2	1.8e-120	95.04	uncharacterized protein LOC103491103 OS=Cucumis melo OX=3656 GN=LOC103491103 PE=...	[more]
A0A6J1E9T9	7.8e-79	70.20	uncharacterized protein LOC111431177 OS=Cucurbita moschata OX=3662 GN=LOC1114311...	[more]
A0A6J1L5G4	8.9e-75	69.42	uncharacterized protein LOC111500193 OS=Cucurbita maxima OX=3661 GN=LOC111500193...	[more]

BLAST of CsaV3_3G000220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35700.1	4.3e-13	37.75	zinc finger (C2H2 type) family protein	[more]
AT4G35610.1	5.6e-13	36.67	zinc finger (C2H2 type) family protein	[more]
AT4G35280.1	7.9e-07	40.00	C2H2-like zinc finger protein	[more]
AT2G26940.1	1.9e-05	28.43	C2H2-type zinc finger family protein	[more]
AT5G56200.1	1.6e-04	30.07	C2H2 type zinc finger transcription factor family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 139..162 e-value: 8.8E-8 score: 32.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..217
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..242
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..138
None	No IPR available	PANTHER	PTHR47591	ZINC FINGER PROTEIN ZAT2-RELATED	coord: 5..242
None	No IPR available	PANTHER	PTHR47591:SF4	TRANSCRIPTION REGULATORY PROTEIN SNF2-LIKE	coord: 5..242
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 140..160
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 138..160 score: 8.64193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G000220.1	CsaV3_3G000220.1	mRNA