CsaV3_2G036210 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G036210
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr2: 24438820 .. 24439250 (+)
RNA-Seq ExpressionCsaV3_2G036210
SyntenyCsaV3_2G036210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGCAACACTGAACCAAGCGAGACAGCAGCAAGCAGTGAGATTGGCCGAAAAAGAAGAAGAGTCAAGAGTCCGTCGGATAAATGACATGAAAATTTAGGAGAAAATGTCAAATGACCCGGGTTTTGAAGAGGTCCCGAATGAAAGAAAAAATTGGTATCTCGCTCGGTGTATCCGGTGGCGTGGTCTCGCTTTCTACACTCTCATTCTCTCAGTCTCGCCCTCTCATCACCAACCTCTCTGTCCCGAGAAGAAGAAGTAGGAGAAAAATCTCTCGCCCAAAAACGCCGTGCCGGGGAAGAAGAGGAAGTCGGAGAATACGACCGTGCCGGAGATGGAGAGACTAAAAAACGGCGCTGGAAGGAAATGAAAAAAAAACAGAGAAGAAGAAATTTGAGAAGTAGCACACCTTTTAAGTTACAAAAGTAA

mRNA sequence

ATGAGTGCAACACTGAACCAAGCGAGACAGCAGCAAGCAGTGAGATTGGCCGAAAAAGAAGAAGATCTCGCCCTCTCATCACCAACCTCTCTGTCCCGAGAAGAAGAAGTAGGAGAAAAATCTCTCGCCCAAAAACGCCGTGCCGGGGAAGAAGAGGAAGTCGGAGAATACGACCGTGCCGGAGATGGAGAGACTAAAAAACGGCGCTGGAAGGAAATGAAAAAAAAACAGAGAAGAAGAAATTTGAGAAGTAGCACACCTTTTAAGTTACAAAAGTAA

Coding sequence (CDS)

ATGAGTGCAACACTGAACCAAGCGAGACAGCAGCAAGCAGTGAGATTGGCCGAAAAAGAAGAAGATCTCGCCCTCTCATCACCAACCTCTCTGTCCCGAGAAGAAGAAGTAGGAGAAAAATCTCTCGCCCAAAAACGCCGTGCCGGGGAAGAAGAGGAAGTCGGAGAATACGACCGTGCCGGAGATGGAGAGACTAAAAAACGGCGCTGGAAGGAAATGAAAAAAAAACAGAGAAGAAGAAATTTGAGAAGTAGCACACCTTTTAAGTTACAAAAGTAA

Protein sequence

MSATLNQARQQQAVRLAEKEEDLALSSPTSLSREEEVGEKSLAQKRRAGEEEEVGEYDRAGDGETKKRRWKEMKKKQRRRNLRSSTPFKLQK*
Homology
[Close]
BLAST of CsaV3_2G036210 vs. NCBI nr
Match: KGN63380.1 (hypothetical protein Csa_022085 [Cucumis sativus])

HSP 1 Score: 163.3 bits (412), Expect = 1.0e-36
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 1  MSATLNQARQQQAVRLAEKEEDLALSSPTSLSREEEVGEKSLAQKRRAGEEEEVGEYDRA 60
          MSATLNQARQQQAVRLAEKEEDLALSSPTSLSREEEVGEKSLAQKRRAGEEEEVGEYDRA
Sbjct: 1  MSATLNQARQQQAVRLAEKEEDLALSSPTSLSREEEVGEKSLAQKRRAGEEEEVGEYDRA 60

Query: 61 GDGETKKRRWKEMKKKQRRRNLRSSTPFKLQK 93
          GDGETKKRRWKEMKKKQRRRNLRSSTPFKLQK
Sbjct: 61 GDGETKKRRWKEMKKKQRRRNLRSSTPFKLQK 92

[Close]
BLAST of CsaV3_2G036210 vs. ExPASy TrEMBL
Match: A0A0A0LNA0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G435440 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 4.8e-37
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 1  MSATLNQARQQQAVRLAEKEEDLALSSPTSLSREEEVGEKSLAQKRRAGEEEEVGEYDRA 60
          MSATLNQARQQQAVRLAEKEEDLALSSPTSLSREEEVGEKSLAQKRRAGEEEEVGEYDRA
Sbjct: 1  MSATLNQARQQQAVRLAEKEEDLALSSPTSLSREEEVGEKSLAQKRRAGEEEEVGEYDRA 60

Query: 61 GDGETKKRRWKEMKKKQRRRNLRSSTPFKLQK 93
          GDGETKKRRWKEMKKKQRRRNLRSSTPFKLQK
Sbjct: 61 GDGETKKRRWKEMKKKQRRRNLRSSTPFKLQK 92

The following BLAST results are available for this feature:
BLAST of CsaV3_2G036210 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN63380.11.0e-36100.00hypothetical protein Csa_022085 [Cucumis sativus][more]
BLAST of CsaV3_2G036210 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G036210 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LNA04.8e-37100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G435440 PE=4 SV=1[more]
BLAST of CsaV3_2G036210 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..69
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..85

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G036210.1CsaV3_2G036210.1mRNA