CsaV3_2G015570 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G015570
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Auxin-responsive protein SAUR21-like
Location	chr2: 12948740 .. 12951800 (+)
RNA-Seq Expression	CsaV3_2G015570
Synteny	CsaV3_2G015570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCAGGATTGTTTAATATGTGTTTGCTTGTCTATAATAAGGGGTATGCATAATGTTTCTCTGTAGGTCTGACTTTTCTACTTTCATCAGCCATCTCTGTCTAGATCGGTATATCCATGTCAGTTCTCTCCACTCATTTCGCTTTCCTGATATGTTAATGGCATCTCATGTTGATATTATATATAGCGTCGTTGAAAGATCAGATTTACAAGCTGCATAGTTTCTCTTTCATGCTTCATTTCTTGAGAATTCTCGTCTGTTTCTTGTCTTATCCCCTTGTGATATTGTATAAAGTATCTGGAAAGATAGCTATTTGGTCTCTCTAAAAGGAATTTGGCTGAGAAATGGAATGAATTGGAAAATCAAAGAGCGGCAATCTCGTACTTTCAACTGAGAATCAACATAGTAAAAAGATGTTGCATTGTGATGCCATGGATTTAGATTGATCGTGTCAGGGACGTCCTGCATTCCATAGGTAGAATCATTATTCGAGTTCAGAAAAAGAGTTATTAACTTTTTGTTAGATTTGCTTGAAAACGGAGTAGCTACTTATATTTTGTCCAAATTCTCTCAAATTGTTGAGAGCTGGCAAGTATTCAAAGTTGAAGGGAAAAGCTGAAGAATTGTATACGAGATAGGTAAAGTAGGAAAAAGCTTACCTATCTCAATTCTTAAGTCAAGGAAAAAGCTAAGGTAGGAACAAGTTTTCCCGTTTGTCAAATAGTTCCCATTTGCTGGTCCTAATGATCGGTTTAAAAATGGTGTTTACTCTATTTAGTCTTCTTTACAAGAGCTCGAGTTTAAGCAAGCCATTGACCAAAGATCAGACTGGGTAGTGGTAAATGATTAAGGGGATTGTGCATCCTACAGAAATGTTGAAAATTAAGCCAAAAGGTTCATAAATGATTTCTATCAAAAGGTTTTGGACGAAGAGATCATACATTTCACAAAGATATGCATTGTGAAGTAAGAAGATTTAAGAGCAAACTATTCTATGGCATAAGGAGATTAGGAGATTGATAGTTTGTTATCTCATTAACTTTAACCCATCCTCATTCATGGACTTGAAAACCTTTCAAGAGGAGTGGACTGGATGTCCCGTGTTCAAACTAGGCAATGTAAATTTGAGTGTAAATAATGCATCTTCTTGGTAATGATGATGGTGTCAACAACTAACTTTGATTATTTGACAAATGCAAGTAAAGTTCTATTTGGAATGACCAAGTGCTTAAAAACACGTTTTTCACTTAAAAGTACTTGGAACGTCATTTGAAACATCAATAGCAATGTTTTCTCCTTGAAAATCGTCAAATGTCACACTTTGATGAAGATTATGTATTTTTTAACAAGATATTTTGTTGGCAAAGTAAGGTGATTTATTAGCAATGAGATAGATGAACTCCTTTAACTTGCATATCAAGGTGCAACAATTGGCAATCACATTGGACATATTTATCGTCCTCTGCTGAAATGCTCAATCTGACTCGCATAAACAATTTTTAAAGTGGTATATCTTTTTCCAACACTATTTTGATACTTACCAAACATGTTCTAGACACTTGAACTTGAATAGTATTCATCTAAAAAAATTAGAAACATGATTACATAAAAAGAGAAGGAGGAAAATGGTATATTTTGACAACAAAAACTACACAACTTGTTATATTGCAAGAACATAACTCAACTTTTACTTTCATAAATATGGAATTATATTGTTGAGTTTTATTTGATCTGAAGTTTTCTTTGAATTCATTTTCAAACCACCATATAACAAAAAACATGTATATTTTCTCTTCAACTCCAAGAATCAGCATTTTCTATTTCCAATGGAATGGACTTTGTCTTGAAGTATCCATGACTTGACTTGTGATATATGGAAAAAACTGACGAATGAACCTGAATTGTGGTATAGAGTACAGAGAATATGAATGAGTGGGATAAGAAAATTTGTGGCCCTTTCAAGAGTTGGGCAAAGCCATGTGAACTGGTATACTCAAATATACCCAACCACCAGGCATCAATACCCCAACTAGCCACTAGAAAGGCCACAGTCACCAGCATAGCACTTCCTTCAGAAACTTTATAAATATAAACATCAAAATGAGTCTTCAAGCAGAAAATTCAACTCATTTTAAGTACTATTTCCTCTTCTAGATTGCTCTTACCAATCAGATCAGAACTTTAGATCTTTTTGACAGCCTTTCATCTCAAGAAAATGGGGATTCGTTTTCTATCTTTGGTTCCTCATGTCAAGCAAATTCTGAAGATGCAGTCAGGTTTAACCAAAAAACAGTTGGGTGTTCCAAAAGGCCATGTTGCCGTTTATGTGGGAGAGATTCAAATGAAGCGGTTCGTGGTTCCAATATCTTACCTAAACGATCTGTCGTTCCAGCAACTGCTCAGCTACGCAGAGGAAGAGTTTGGATTCCATCATCCTCAAGGGGGCCTAACAATCCCTTGCAAAGAAGATGCCTTCGTTGATCTCACTTCTAAATTGCAAGTATCTTGAAGGATGAACAGCAGAGCACAAATTGCCATTTTTTTACAACCTTTTCTGGTTGTTTCTGACTCTTTTTGTTTTTTTGACTCGTAATAGAATTTTGTAGAATGGAATGCCCTTATTGCCTGTAAATGAATGCCATACGGTGCATTTACCAACAGAAATTAATTAAAAGGATACACAAATTTACCCTCAATTTCTTTATAGTCTTTTCTTGCTGCTTTATTTGTAATGGTTAACTTGCAATCCAGGGAACTAAGAAAATTTGATATATCACTAAAGAAACTGGGTACCATCTTGAAGATTCAAACTTCAAAGTTTAACATATCCGAAGCAAACTTGATTCTTATGTGCCAATTTAAAATTTTCGATTGAAAGTTTACTCTTGGTTTGATCTAATAAAAAAGGTCCTTATCCATCATATGCGCCACTCCAGTTAATTATGTAGTATTGATGGCTGAGATTGGGAGAGCTGTCTTATAGAAGACATAGTGAGAAATTACTTATGATATATATTTACTGTAAAATATGATTCAGTATTTGAGATTTGTCTTGGAGGCC

mRNA sequence

ATGGGGATTCGTTTTCTATCTTTGGTTCCTCATGTCAAGCAAATTCTGAAGATGCAGTCAGGTTTAACCAAAAAACAGTTGGGTGTTCCAAAAGGCCATGTTGCCGTTTATGTGGGAGAGATTCAAATGAAGCGGTTCGTGGTTCCAATATCTTACCTAAACGATCTGTCGTTCCAGCAACTGCTCAGCTACGCAGAGGAAGAGTTTGGATTCCATCATCCTCAAGGGGGCCTAACAATCCCTTGCAAAGAAGATGCCTTCGTTGATCTCACTTCTAAATTGCAAGTATCTTGA

Coding sequence (CDS)

ATGGGGATTCGTTTTCTATCTTTGGTTCCTCATGTCAAGCAAATTCTGAAGATGCAGTCAGGTTTAACCAAAAAACAGTTGGGTGTTCCAAAAGGCCATGTTGCCGTTTATGTGGGAGAGATTCAAATGAAGCGGTTCGTGGTTCCAATATCTTACCTAAACGATCTGTCGTTCCAGCAACTGCTCAGCTACGCAGAGGAAGAGTTTGGATTCCATCATCCTCAAGGGGGCCTAACAATCCCTTGCAAAGAAGATGCCTTCGTTGATCTCACTTCTAAATTGCAAGTATCTTGA

Protein sequence

MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS*

Homology

[Close]

BLAST of CsaV3_2G015570 vs. NCBI nr
Match: KGN61883.1 (hypothetical protein Csa_006271 [Cucumis sativus])

HSP 1 Score: 198.4 bits (503), Expect = 2.9e-47
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60
          MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ
Sbjct: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60

Query: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 98
          LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 97

[Close]

BLAST of CsaV3_2G015570 vs. NCBI nr
Match: KAA0045680.1 (auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa] >TYJ99604.1 auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa])

HSP 1 Score: 189.5 bits (480), Expect = 1.4e-44
Identity = 93/97 (95.88%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60
          MGIRFLSLVPHVKQILKMQSG TKK LGVPKGHVAVYVGEIQMKRFVVPISYLN LSFQQ
Sbjct: 1  MGIRFLSLVPHVKQILKMQSGFTKKLLGVPKGHVAVYVGEIQMKRFVVPISYLNHLSFQQ 60

Query: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 98
          LLS+AEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 97

[Close]

BLAST of CsaV3_2G015570 vs. NCBI nr
Match: XP_038901159.1 (auxin-responsive protein SAUR24-like [Benincasa hispida])

HSP 1 Score: 178.3 bits (451), Expect = 3.2e-41
Identity = 86/97 (88.66%), Postives = 90/97 (92.78%), Query Frame = 0


Query: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60
          MGIRFLSLVPH KQILKMQSG TK QL VPKGHVAVYVGEIQMKRFVVPISYLN  SFQ+
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNHPSFQK 60

Query: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 98
          LL +AEEEFGFHHPQGGLTIPCKEDAF+DLTS+LQVS
Sbjct: 61 LLRHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of CsaV3_2G015570 vs. NCBI nr
Match: XP_022944365.1 (auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022944367.1 auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022986731.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >XP_022986733.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >XP_022986734.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >XP_022986735.1 auxin-responsive protein SAUR24-like [Cucurbita maxima] >KAG6571048.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 177.9 bits (450), Expect = 4.1e-41
Identity = 86/97 (88.66%), Postives = 90/97 (92.78%), Query Frame = 0


Query: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60
          MGIRFLSLVPH KQILKMQSG TK QL VPKGHVAVYVGEIQ KRFVVPISYLN  SFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 98
          LLS+AEE+FGFHHPQGGLTIPCKEDAF+DLTS+LQVS
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of CsaV3_2G015570 vs. NCBI nr
Match: XP_022944366.1 (auxin-responsive protein SAUR24-like [Cucurbita moschata] >KAG6571052.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 176.8 bits (447), Expect = 9.2e-41
Identity = 85/97 (87.63%), Postives = 90/97 (92.78%), Query Frame = 0


Query: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60
          MGIRFLSLVPH KQILKMQSG TK QL VPKGHVAVYVGEIQ KRF+VPISYLN  SFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFMVPISYLNHPSFQQ 60

Query: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 98
          LLS+AEE+FGFHHPQGGLTIPCKEDAF+DLTS+LQVS
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of CsaV3_2G015570 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 9.9e-22
Identity = 50/83 (60.24%), Postives = 61/83 (73.49%), Query Frame = 0


Query: 13 KQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFH 72
          K+IL   +G        PKG +AVYVGE Q KR++VP+SYLN  SFQ LLS +EEEFGF 
Sbjct: 11 KKILSRSTGAGS---AAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFD 70

Query: 73 HPQGGLTIPCKEDAFVDLTSKLQ 96
          HP GGLTIPC ED F+++TS+LQ
Sbjct: 71 HPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CsaV3_2G015570 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.3e-21
Identity = 49/79 (62.03%), Postives = 58/79 (73.42%), Query Frame = 0


Query: 17 KMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFHHPQG 76
          K+ S  T      PKG +AVYVGE Q KR++VPISYLN  SFQ LLS +EEEFGF HP G
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 77 GLTIPCKEDAFVDLTSKLQ 96
          GLTIPC ED F+++TS+ Q
Sbjct: 72 GLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of CsaV3_2G015570 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.7e-21
Identity = 50/90 (55.56%), Postives = 64/90 (71.11%), Query Frame = 0


Query: 6  LSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYA 65
          ++LV  +    K+ S  T      PKG +AVYVGE Q KR++VP+SYLN  SFQ LLS +
Sbjct: 1  MALVRSLLGAKKILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKS 60

Query: 66 EEEFGFHHPQGGLTIPCKEDAFVDLTSKLQ 96
          E+EFGF HP GGLTIPC ED F+++TS+LQ
Sbjct: 61 EDEFGFDHPMGGLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of CsaV3_2G015570 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 4.9e-21
Identity = 48/79 (60.76%), Postives = 59/79 (74.68%), Query Frame = 0


Query: 17 KMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFHHPQG 76
          K+ S  T      PKG +AVYVGE Q KR++VP+SYL+  SFQ LLS +EEEFGF HP G
Sbjct: 12 KILSRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFAHPMG 71

Query: 77 GLTIPCKEDAFVDLTSKLQ 96
          GLTIPC ED F+++TS+LQ
Sbjct: 72 GLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CsaV3_2G015570 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 6.4e-21
Identity = 51/94 (54.26%), Postives = 66/94 (70.21%), Query Frame = 0


Query: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60
          MG R    +P +++     +  + K + V KG++AVYVGE +M+RFV+P+SYLN  SFQ 
Sbjct: 1  MGFR----LPGIRKASFSANQASSKAVDVEKGYLAVYVGE-KMRRFVIPVSYLNKPSFQD 60

Query: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKL 95
          LLS AEEEFG+HHP GGLTIPC ED F  +TS L
Sbjct: 61 LLSQAEEEFGYHHPNGGLTIPCSEDVFQHITSFL 89

[Close]

BLAST of CsaV3_2G015570 vs. ExPASy TrEMBL
Match: A0A0A0LJA3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258790 PE=3 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 1.4e-47
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0


Query: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60
          MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ
Sbjct: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60

Query: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 98
          LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 97

[Close]

BLAST of CsaV3_2G015570 vs. ExPASy TrEMBL
Match: A0A5A7TRB6 (Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001780 PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 6.6e-45
Identity = 93/97 (95.88%), Postives = 94/97 (96.91%), Query Frame = 0


Query: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60
          MGIRFLSLVPHVKQILKMQSG TKK LGVPKGHVAVYVGEIQMKRFVVPISYLN LSFQQ
Sbjct: 1  MGIRFLSLVPHVKQILKMQSGFTKKLLGVPKGHVAVYVGEIQMKRFVVPISYLNHLSFQQ 60

Query: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 98
          LLS+AEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS
Sbjct: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 97

[Close]

BLAST of CsaV3_2G015570 vs. ExPASy TrEMBL
Match: A0A6J1JHE3 (auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111484398 PE=3 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.0e-41
Identity = 86/97 (88.66%), Postives = 90/97 (92.78%), Query Frame = 0


Query: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60
          MGIRFLSLVPH KQILKMQSG TK QL VPKGHVAVYVGEIQ KRFVVPISYLN  SFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 98
          LLS+AEE+FGFHHPQGGLTIPCKEDAF+DLTS+LQVS
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of CsaV3_2G015570 vs. ExPASy TrEMBL
Match: A0A6J1FVI4 (auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC111448832 PE=3 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.0e-41
Identity = 86/97 (88.66%), Postives = 90/97 (92.78%), Query Frame = 0


Query: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60
          MGIRFLSLVPH KQILKMQSG TK QL VPKGHVAVYVGEIQ KRFVVPISYLN  SFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 98
          LLS+AEE+FGFHHPQGGLTIPCKEDAF+DLTS+LQVS
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of CsaV3_2G015570 vs. ExPASy TrEMBL
Match: A0A6J1FU83 (auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC111448831 PE=3 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 4.4e-41
Identity = 85/97 (87.63%), Postives = 90/97 (92.78%), Query Frame = 0


Query: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60
          MGIRFLSLVPH KQILKMQSG TK QL VPKGHVAVYVGEIQ KRF+VPISYLN  SFQQ
Sbjct: 1  MGIRFLSLVPHAKQILKMQSGFTKNQLDVPKGHVAVYVGEIQRKRFMVPISYLNHPSFQQ 60

Query: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 98
          LLS+AEE+FGFHHPQGGLTIPCKEDAF+DLTS+LQVS
Sbjct: 61 LLSHAEEKFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 97

[Close]

BLAST of CsaV3_2G015570 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.4 bits (272), Expect = 1.7e-24
Identity = 55/97 (56.70%), Postives = 67/97 (69.07%), Query Frame = 0


Query: 1  MGIRFLSLVPHVKQILK----MQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDL 60
          M IR   ++   KQIL+    + S  +   L VPKG++AVYVGE  MKRFVVP+SYL+  
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFQQLLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSK 94
          SFQ LL  AEEEFGF HP GGLTIPC E+ F+DL S+
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of CsaV3_2G015570 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 105.1 bits (261), Expect = 3.2e-23
Identity = 53/98 (54.08%), Postives = 68/98 (69.39%), Query Frame = 0


Query: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGE-IQMKRFVVPISYLNDLSFQ 60
          M IR   ++   KQ+LK  S  +   + +PKGH+AVYVGE +Q +RFVVP++YL+   FQ
Sbjct: 1  MAIRISRVLQSSKQLLKSLSH-SSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 QLLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 98
          +LL  AEEEFGF HP GGLTIPC E  F+DL S+L  S
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of CsaV3_2G015570 vs. TAIR 10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 105.1 bits (261), Expect = 3.2e-23
Identity = 57/105 (54.29%), Postives = 73/105 (69.52%), Query Frame = 0


Query: 1   MGIRFLSLVPHVKQILKMQSGLTKKQLG------VPKGHVAVYVG---EIQMKRFVVPIS 60
           MG+   ++    KQILK+ S   + +        VPKGHVAVYVG   E++ KRFVVPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNDLSFQQLLSYAEEEFGFHHPQGGLTIPCKEDAFVDL-TSKLQ 96
           +LN  SF++ LS AEEEFGF+HP GGLTIPC+E+ F+DL  S+LQ
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]

BLAST of CsaV3_2G015570 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 104.0 bits (258), Expect = 7.0e-23
Identity = 50/83 (60.24%), Postives = 61/83 (73.49%), Query Frame = 0


Query: 13 KQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFH 72
          K+IL   +G        PKG +AVYVGE Q KR++VP+SYLN  SFQ LLS +EEEFGF 
Sbjct: 11 KKILSRSTGAGS---AAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFD 70

Query: 73 HPQGGLTIPCKEDAFVDLTSKLQ 96
          HP GGLTIPC ED F+++TS+LQ
Sbjct: 71 HPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CsaV3_2G015570 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 103.6 bits (257), Expect = 9.2e-23
Identity = 49/79 (62.03%), Postives = 58/79 (73.42%), Query Frame = 0


Query: 17 KMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFHHPQG 76
          K+ S  T      PKG +AVYVGE Q KR++VPISYLN  SFQ LLS +EEEFGF HP G
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 77 GLTIPCKEDAFVDLTSKLQ 96
          GLTIPC ED F+++TS+ Q
Sbjct: 72 GLTIPCPEDTFINVTSRFQ 90

The following BLAST results are available for this feature:

BLAST of CsaV3_2G015570 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN61883.1	2.9e-47	100.00	hypothetical protein Csa_006271 [Cucumis sativus]	[more]
KAA0045680.1	1.4e-44	95.88	auxin-responsive protein SAUR21-like [Cucumis melo var. makuwa] >TYJ99604.1 auxi...	[more]
XP_038901159.1	3.2e-41	88.66	auxin-responsive protein SAUR24-like [Benincasa hispida]	[more]
XP_022944365.1	4.1e-41	88.66	auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_022944367.1 auxin-...	[more]
XP_022944366.1	9.2e-41	87.63	auxin-responsive protein SAUR24-like [Cucurbita moschata] >KAG6571052.1 Auxin-re...	[more]

BLAST of CsaV3_2G015570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK62	9.9e-22	60.24	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 S...	[more]
Q9FJG0	1.3e-21	62.03	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 S...	[more]
Q9FJF7	1.7e-21	55.56	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 S...	[more]
Q9FJG1	4.9e-21	60.76	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 S...	[more]
P33083	6.4e-21	54.26	Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1	[more]

BLAST of CsaV3_2G015570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJA3	1.4e-47	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258790 PE=3 SV=1	[more]
A0A5A7TRB6	6.6e-45	95.88	Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A6J1JHE3	2.0e-41	88.66	auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111484398...	[more]
A0A6J1FVI4	2.0e-41	88.66	auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC1114488...	[more]
A0A6J1FU83	4.4e-41	87.63	auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC1114488...	[more]

BLAST of CsaV3_2G015570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38840.1	1.7e-24	56.70	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	3.2e-23	54.08	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	3.2e-23	54.29	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	7.0e-23	60.24	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	9.2e-23	62.03	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 17..91 e-value: 3.7E-23 score: 81.5
None	No IPR available	PANTHER	PTHR31929:SF121	AUXIN-RESPONSIVE PROTEIN SAUR21-LIKE	coord: 1..95
None	No IPR available	PANTHER	PTHR31929	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED	coord: 1..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G015570.1	CsaV3_2G015570.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin