CsaV3_2G014240 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_2G014240
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	CCG-binding protein 1
Location	chr2: 11894235 .. 11895717 (-)
RNA-Seq Expression	CsaV3_2G014240
Synteny	CsaV3_2G014240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTAAATAAAACAAATCCCCATCCTTATCCGCTTCTTCTTCATCTCTCATCTCATCTTCTTCCTCACTTTTTTCTCTCCAAATTTCATTCCCTTTCCCCTTTTGGATCATCAATGGATTCCTCCCTTCTCCGTTCCCTCTCATCTCCTTTACTTCTCGAATCCCCCGACCTTCATCTTCGCCGCATCGGATCCCTCTCCTCTTCTCCATTTTCTTCTTCCCTTGTTGTTCGTTCTTCTTCCAAGAGCCATTCTTATATTCCCAAGCTCCAGCCCTTTAGCCGTTCTAAGCTTGATCGCGCCATCAAAGAACCCCCTCTGATTCAGAAGTCTGAGAACGAGCTTGCAGGTTTTATTATTATTATTATTATTTTTGTTCTTGTGGTTTTGTTCTGATCTGATCCTCTGCGATTGTTTTTAGATTATTGTTCGACGTTGGAAGGAGACGATTCTTATAGCTGTTGGAAAGCGTATTTCGAACTCCAAGATCTTGAAGTGAGTTTCTATGGTTTTCTTAATCTATTTTACTTCGACTTTTTTCTCTTCTTTCACACTTGATTTCTTTTGCCCCCCAAATTCGATCTCTGTTTCGAACTCAAAGATCTTAGAGTGAGTTTTTATTGAATTTCTAATTCAATTTCCCTCTCCCACTTAAATCCAGACCTAATTTTGATCAATTCTATCAAATACATGTAGAGTAATGTAACGAATGGTTTGTTATATGTGGTTTGAAATCAGAAAGAATCGCCAAAACAAGAAGTGGAGAAACTGATTCTACAGGCAGGAGGTGTGAAATCACTGATCGGGTGCGTACACGGGATAACAGCAATACAAAAGAGCAAGGGAAAGGAAAAGGAGGAAAGGAAGGCATGGAAGAAGGAAGTGGAAGGAAGGGGGAATAGGGAGTGCCCAATACCAGATGGATTGCCAAAATCTGCGGAAGAAATAGAAGAAGAAGAAGAAGGGAGAATGCCAGATTCGGCATTTACGAGATTGCTGAGGAGCAAAGGCACATTCCCTGCTTGGTATTCCCCTGCACCCGATCATGAAACAGATTGAAGTTCAAATGGTTTTTAGGGTGTAGGGTTTAGTTTTGGCAGATTGATGAGTAGTAGTATTAGTATTAGTATTAGTGAAGTTGGATTGATGATGAATTGGTAAATATTTGTTATATAAAATTTGTGATTAGGGGATAGCTTTTTTGTGTATATTTAAATTTGATGTTTGTTGTTTTGGTTTATATTGTGTGTTGTTGAGATAGGTTGTGGATAAAAAAGGGTATGAACTAAGTAAGAAATAAATAAATGAAGTCCTACATAATCTTACTTAAGAATGAGTTTGAATGGGGAGAGTGCCCTTTCCGTTTCCAAGTTTGGTAACTTGTTTTTCTTTCTTGTATTTTTATTATTATTATATTTTTTTTATCTATACTTCTTTCAAATTTCATAGAATAAATTTGATAATGCTTGAATTCCCAAATTCT

mRNA sequence

ATGGATTCCTCCCTTCTCCGTTCCCTCTCATCTCCTTTACTTCTCGAATCCCCCGACCTTCATCTTCGCCGCATCGGATCCCTCTCCTCTTCTCCATTTTCTTCTTCCCTTGTTGTTCGTTCTTCTTCCAAGAGCCATTCTTATATTCCCAAGCTCCAGCCCTTTAGCCGTTCTAAGCTTGATCGCGCCATCAAAGAACCCCCTCTGATTCAGAAGTCTGAGAACGAGCTTGCAGATTATTGTTCGACGTTGGAAGGAGACGATTCTTATAGCTGTTGGAAAGCGTATTTCGAACTCCAAGATCTTGAAAAAGAATCGCCAAAACAAGAAGTGGAGAAACTGATTCTACAGGCAGGAGGTGTGAAATCACTGATCGGGTGCGTACACGGGATAACAGCAATACAAAAGAGCAAGGGAAAGGAAAAGGAGGAAAGGAAGGCATGGAAGAAGGAAGTGGAAGGAAGGGGGAATAGGGAGTGCCCAATACCAGATGGATTGCCAAAATCTGCGGAAGAAATAGAAGAAGAAGAAGAAGGGAGAATGCCAGATTCGGCATTTACGAGATTGCTGAGGAGCAAAGGCACATTCCCTGCTTGGTATTCCCCTGCACCCGATCATGAAACAGATTGA

Coding sequence (CDS)

ATGGATTCCTCCCTTCTCCGTTCCCTCTCATCTCCTTTACTTCTCGAATCCCCCGACCTTCATCTTCGCCGCATCGGATCCCTCTCCTCTTCTCCATTTTCTTCTTCCCTTGTTGTTCGTTCTTCTTCCAAGAGCCATTCTTATATTCCCAAGCTCCAGCCCTTTAGCCGTTCTAAGCTTGATCGCGCCATCAAAGAACCCCCTCTGATTCAGAAGTCTGAGAACGAGCTTGCAGATTATTGTTCGACGTTGGAAGGAGACGATTCTTATAGCTGTTGGAAAGCGTATTTCGAACTCCAAGATCTTGAAAAAGAATCGCCAAAACAAGAAGTGGAGAAACTGATTCTACAGGCAGGAGGTGTGAAATCACTGATCGGGTGCGTACACGGGATAACAGCAATACAAAAGAGCAAGGGAAAGGAAAAGGAGGAAAGGAAGGCATGGAAGAAGGAAGTGGAAGGAAGGGGGAATAGGGAGTGCCCAATACCAGATGGATTGCCAAAATCTGCGGAAGAAATAGAAGAAGAAGAAGAAGGGAGAATGCCAGATTCGGCATTTACGAGATTGCTGAGGAGCAAAGGCACATTCCCTGCTTGGTATTCCCCTGCACCCGATCATGAAACAGATTGA

Protein sequence

MDSSLLRSLSSPLLLESPDLHLRRIGSLSSSPFSSSLVVRSSSKSHSYIPKLQPFSRSKLDRAIKEPPLIQKSENELADYCSTLEGDDSYSCWKAYFELQDLEKESPKQEVEKLILQAGGVKSLIGCVHGITAIQKSKGKEKEERKAWKKEVEGRGNRECPIPDGLPKSAEEIEEEEEGRMPDSAFTRLLRSKGTFPAWYSPAPDHETD*

Homology

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BLAST of CsaV3_2G014240 vs. NCBI nr
Match: XP_004153261.1 (CCG-binding protein 1 [Cucumis sativus] >KGN61745.1 hypothetical protein Csa_006358 [Cucumis sativus])

HSP 1 Score: 411.0 bits (1055), Expect = 6.2e-111
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MDSSLLRSLSSPLLLESPDLHLRRIGSLSSSPFSSSLVVRSSSKSHSYIPKLQPFSRSKL 60
           MDSSLLRSLSSPLLLESPDLHLRRIGSLSSSPFSSSLVVRSSSKSHSYIPKLQPFSRSKL
Sbjct: 1   MDSSLLRSLSSPLLLESPDLHLRRIGSLSSSPFSSSLVVRSSSKSHSYIPKLQPFSRSKL 60

Query: 61  DRAIKEPPLIQKSENELADYCSTLEGDDSYSCWKAYFELQDLEKESPKQEVEKLILQAGG 120
           DRAIKEPPLIQKSENELADYCSTLEGDDSYSCWKAYFELQDLEKESPKQEVEKLILQAGG
Sbjct: 61  DRAIKEPPLIQKSENELADYCSTLEGDDSYSCWKAYFELQDLEKESPKQEVEKLILQAGG 120

Query: 121 VKSLIGCVHGITAIQKSKGKEKEERKAWKKEVEGRGNRECPIPDGLPKSAEEIEEEEEGR 180
           VKSLIGCVHGITAIQKSKGKEKEERKAWKKEVEGRGNRECPIPDGLPKSAEEIEEEEEGR
Sbjct: 121 VKSLIGCVHGITAIQKSKGKEKEERKAWKKEVEGRGNRECPIPDGLPKSAEEIEEEEEGR 180

Query: 181 MPDSAFTRLLRSKGTFPAWYSPAPDHETD 210
           MPDSAFTRLLRSKGTFPAWYSPAPDHETD
Sbjct: 181 MPDSAFTRLLRSKGTFPAWYSPAPDHETD 209

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BLAST of CsaV3_2G014240 vs. NCBI nr
Match: XP_008459226.1 (PREDICTED: CCG-binding protein 1 [Cucumis melo] >KAA0045998.1 CCG-binding protein 1 [Cucumis melo var. makuwa] >TYK13589.1 CCG-binding protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 382.5 bits (981), Expect = 2.4e-102
Identity = 194/209 (92.82%), Postives = 202/209 (96.65%), Query Frame = 0


Query: 1   MDSSLLRSLSSPLLLESPDLHLRRIGSLSSSPFSSSLVVRSSSKSHSYIPKLQPFSRSKL 60
           M+SSLLRSLSSPLLLES DLHLRRIGSL SS FSS+LVVRSSSKSHSYIPKL+PFSRSKL
Sbjct: 1   MESSLLRSLSSPLLLESTDLHLRRIGSLPSSRFSSTLVVRSSSKSHSYIPKLEPFSRSKL 60

Query: 61  DRAIKEPPLIQKSENELADYCSTLEGDDSYSCWKAYFELQDLEKESPKQEVEKLILQAGG 120
           DRAIKEPPLI+KSENELADYCSTLEGDDSYSCWKAYFEL+DLEKE+PKQEVEKLILQAGG
Sbjct: 61  DRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKDLEKETPKQEVEKLILQAGG 120

Query: 121 VKSLIGCVHGITAIQKSKGKEKEERKAWKKEVEGRGNRECPIPDGLPKSAEEIEEEEEGR 180
           VKSLIGC+HGITAI KSKGKEKEERKAWK  VEGRGN+ECPIPDGLPKSAEEIEEEE GR
Sbjct: 121 VKSLIGCLHGITAIPKSKGKEKEERKAWKTGVEGRGNKECPIPDGLPKSAEEIEEEEVGR 180

Query: 181 MPDSAFTRLLRSKGTFPAWYSPAPDHETD 210
           MPDSAFTRLLRSKGTFPAWYSPAPDHETD
Sbjct: 181 MPDSAFTRLLRSKGTFPAWYSPAPDHETD 209

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BLAST of CsaV3_2G014240 vs. NCBI nr
Match: XP_038877912.1 (CCG-binding protein 1 [Benincasa hispida])

HSP 1 Score: 352.1 bits (902), Expect = 3.4e-93
Identity = 183/209 (87.56%), Postives = 195/209 (93.30%), Query Frame = 0


Query: 1   MDSSLLRSLSSPLLLESPDLHLRRIGSLSSSPFSSSLVVRSSSKSHSYIPKLQPFSRSKL 60
           M+SS+LRS+SSPLLL++ DLHLRRIG LSSSP  SS VVR SSK+H+YIPKL+PFSR+KL
Sbjct: 1   MESSVLRSVSSPLLLDNTDLHLRRIG-LSSSPRFSSTVVRCSSKNHAYIPKLEPFSRTKL 60

Query: 61  DRAIKEPPLIQKSENELADYCSTLEGDDSYSCWKAYFELQDLEKESPKQEVEKLILQAGG 120
           DRAIKEPPLI+KSENELADYCSTLEGDDSYSCWKAYFEL+DLEKESPKQEVEKLILQAGG
Sbjct: 61  DRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGG 120

Query: 121 VKSLIGCVHGITAIQKSKGKEKEERKAWKKEVEGRGNRECPIPDGLPKSAEEIEEEEEGR 180
           VKSLIGC+HGITAIQK KGKEKE RK W K VEGRG RECPIPDGLPKSAEEIEEEEEGR
Sbjct: 121 VKSLIGCLHGITAIQKRKGKEKETRKPW-KGVEGRG-RECPIPDGLPKSAEEIEEEEEGR 180

Query: 181 MPDSAFTRLLRSKGTFPAWYSPAPDHETD 210
           MPDS FTRLLRSKG FPAWYSPAPDHETD
Sbjct: 181 MPDSPFTRLLRSKGAFPAWYSPAPDHETD 206

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BLAST of CsaV3_2G014240 vs. NCBI nr
Match: XP_022943281.1 (CCG-binding protein 1 [Cucurbita moschata] >KAG6571149.1 CCG-binding protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010960.1 CCG-binding protein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 303.5 bits (776), Expect = 1.4e-78
Identity = 164/209 (78.47%), Postives = 181/209 (86.60%), Query Frame = 0


Query: 1   MDSSLLRSLSSPLLLESPDLHLRRIGSLSSSPFSSSLVVRSSSKSHSYIPKLQPFSRSKL 60
           M+SSLLRS SSPLLLES DL LRRIGS+SS  F S+ VVR SS+SH+ IPKL+PFSR+KL
Sbjct: 1   MESSLLRSASSPLLLESTDL-LRRIGSVSSPRFPST-VVRCSSRSHASIPKLEPFSRTKL 60

Query: 61  DRAIKEPPLIQKSENELADYCSTLEGDDSYSCWKAYFELQDLEKESPKQEVEKLILQAGG 120
           DRAIK+PPL++KSENELADYCSTL+GDDSYSCWKAYFEL+DLEKESPKQEVEKLILQAGG
Sbjct: 61  DRAIKDPPLVEKSENELADYCSTLDGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGG 120

Query: 121 VKSLIGCVHGITAIQKSKGKEKEERKAWKKEVEGRGNRECPIPDGLPKSAEEIEEEEEGR 180
           VKSLIG +HGI  I K K  E E +K   + VE R  R+CPIPDGLPKSAEEIEEEE  R
Sbjct: 121 VKSLIGLLHGIAGIHKRKESENEAKKPLNR-VE-RRVRDCPIPDGLPKSAEEIEEEEGAR 180

Query: 181 MPDSAFTRLLRSKGTFPAWYSPAPDHETD 210
           MPDS FTRLLRSKGTFPAWY+PAPDHETD
Sbjct: 181 MPDSPFTRLLRSKGTFPAWYTPAPDHETD 205

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BLAST of CsaV3_2G014240 vs. NCBI nr
Match: XP_023512041.1 (CCG-binding protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.8 bits (774), Expect = 2.4e-78
Identity = 164/211 (77.73%), Postives = 181/211 (85.78%), Query Frame = 0


Query: 1   MDSSLLRSLSSPLLLESPDLHLRRIGSLSSSPFSSSLVVRSSSKSHSYIPKLQPFSRSKL 60
           M+SSLLRS+SSPLLLES DL LRRIGS+SS  F S+ VVR SS+SH+ IPKL+PFSR+KL
Sbjct: 1   MESSLLRSVSSPLLLESTDL-LRRIGSVSSPRFPST-VVRCSSRSHASIPKLEPFSRTKL 60

Query: 61  DRAIKEPPLIQKSENELADYCSTLEGDDSYSCWKAYFELQDLEKESPKQEVEKLILQAGG 120
           DRAIK+PPL++KSENELADYCSTL+GDDSYSCWKAYFEL+DLEKESPKQEVEKLILQAGG
Sbjct: 61  DRAIKDPPLVEKSENELADYCSTLDGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGG 120

Query: 121 VKSLIGCVHGITAIQKSKGKEKEERKAWKKEVEG--RGNRECPIPDGLPKSAEEIEEEEE 180
           VKSLIG +HGI  I K K  E E     KK + G  R  R+CPIPDGLPKSAEEIEEEE 
Sbjct: 121 VKSLIGLLHGIAGIHKRKESENEA----KKPLNGVERRVRDCPIPDGLPKSAEEIEEEEG 180

Query: 181 GRMPDSAFTRLLRSKGTFPAWYSPAPDHETD 210
            RMPDS FTRLLRSKGTFPAWY+PAPDHETD
Sbjct: 181 ARMPDSPFTRLLRSKGTFPAWYTPAPDHETD 205

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BLAST of CsaV3_2G014240 vs. ExPASy Swiss-Prot
Match: Q9XIM0 (CCG-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=MEE14 PE=1 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 3.8e-55
Identity = 107/172 (62.21%), Postives = 133/172 (77.33%), Query Frame = 0


Query: 38  VVRSSSKSHSYIPKLQPFSRSKLDRAIKEPPLIQKSENELADYCSTLEGDDSYSCWKAYF 97
           VVR SS     +PKL+ FSR K DR +++PPLI+K+E+EL+DYCSTLEGDDSYSCW+AYF
Sbjct: 34  VVRCSSTRD--VPKLELFSRGKFDRILQDPPLIEKAESELSDYCSTLEGDDSYSCWRAYF 93

Query: 98  ELQDLEKESPKQEVEKLILQAGGVKSLIGCVHGITAIQKSKGKEKEERKAWKKEVEGRGN 157
           EL+DLE+E PK EVE LILQ GG+KSLIGC+HG+ +++K    +       + + E   N
Sbjct: 94  ELKDLEREKPKVEVENLILQTGGLKSLIGCLHGVASMEKDNKTKNGLHVGEESDREKGMN 153

Query: 158 RECPIPDGLPKSAEEIEEEEEGRMPDSAFTRLLRSKGTFPAWYSPAPDHETD 210
               IPDGLPKS +E+EEEE+ +MPDSAFTRLLRSKGT PAW+S APDHETD
Sbjct: 154 LHIHIPDGLPKSEQELEEEEKSKMPDSAFTRLLRSKGTIPAWFSHAPDHETD 203

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BLAST of CsaV3_2G014240 vs. ExPASy TrEMBL
Match: A0A0A0LIJ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G237150 PE=4 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 3.0e-111
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MDSSLLRSLSSPLLLESPDLHLRRIGSLSSSPFSSSLVVRSSSKSHSYIPKLQPFSRSKL 60
           MDSSLLRSLSSPLLLESPDLHLRRIGSLSSSPFSSSLVVRSSSKSHSYIPKLQPFSRSKL
Sbjct: 1   MDSSLLRSLSSPLLLESPDLHLRRIGSLSSSPFSSSLVVRSSSKSHSYIPKLQPFSRSKL 60

Query: 61  DRAIKEPPLIQKSENELADYCSTLEGDDSYSCWKAYFELQDLEKESPKQEVEKLILQAGG 120
           DRAIKEPPLIQKSENELADYCSTLEGDDSYSCWKAYFELQDLEKESPKQEVEKLILQAGG
Sbjct: 61  DRAIKEPPLIQKSENELADYCSTLEGDDSYSCWKAYFELQDLEKESPKQEVEKLILQAGG 120

Query: 121 VKSLIGCVHGITAIQKSKGKEKEERKAWKKEVEGRGNRECPIPDGLPKSAEEIEEEEEGR 180
           VKSLIGCVHGITAIQKSKGKEKEERKAWKKEVEGRGNRECPIPDGLPKSAEEIEEEEEGR
Sbjct: 121 VKSLIGCVHGITAIQKSKGKEKEERKAWKKEVEGRGNRECPIPDGLPKSAEEIEEEEEGR 180

Query: 181 MPDSAFTRLLRSKGTFPAWYSPAPDHETD 210
           MPDSAFTRLLRSKGTFPAWYSPAPDHETD
Sbjct: 181 MPDSAFTRLLRSKGTFPAWYSPAPDHETD 209

[Close]

BLAST of CsaV3_2G014240 vs. ExPASy TrEMBL
Match: A0A5A7TT03 (CCG-binding protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00750 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 1.1e-102
Identity = 194/209 (92.82%), Postives = 202/209 (96.65%), Query Frame = 0


Query: 1   MDSSLLRSLSSPLLLESPDLHLRRIGSLSSSPFSSSLVVRSSSKSHSYIPKLQPFSRSKL 60
           M+SSLLRSLSSPLLLES DLHLRRIGSL SS FSS+LVVRSSSKSHSYIPKL+PFSRSKL
Sbjct: 1   MESSLLRSLSSPLLLESTDLHLRRIGSLPSSRFSSTLVVRSSSKSHSYIPKLEPFSRSKL 60

Query: 61  DRAIKEPPLIQKSENELADYCSTLEGDDSYSCWKAYFELQDLEKESPKQEVEKLILQAGG 120
           DRAIKEPPLI+KSENELADYCSTLEGDDSYSCWKAYFEL+DLEKE+PKQEVEKLILQAGG
Sbjct: 61  DRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKDLEKETPKQEVEKLILQAGG 120

Query: 121 VKSLIGCVHGITAIQKSKGKEKEERKAWKKEVEGRGNRECPIPDGLPKSAEEIEEEEEGR 180
           VKSLIGC+HGITAI KSKGKEKEERKAWK  VEGRGN+ECPIPDGLPKSAEEIEEEE GR
Sbjct: 121 VKSLIGCLHGITAIPKSKGKEKEERKAWKTGVEGRGNKECPIPDGLPKSAEEIEEEEVGR 180

Query: 181 MPDSAFTRLLRSKGTFPAWYSPAPDHETD 210
           MPDSAFTRLLRSKGTFPAWYSPAPDHETD
Sbjct: 181 MPDSAFTRLLRSKGTFPAWYSPAPDHETD 209

[Close]

BLAST of CsaV3_2G014240 vs. ExPASy TrEMBL
Match: A0A1S3C971 (CCG-binding protein 1 OS=Cucumis melo OX=3656 GN=LOC103498415 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 1.1e-102
Identity = 194/209 (92.82%), Postives = 202/209 (96.65%), Query Frame = 0


Query: 1   MDSSLLRSLSSPLLLESPDLHLRRIGSLSSSPFSSSLVVRSSSKSHSYIPKLQPFSRSKL 60
           M+SSLLRSLSSPLLLES DLHLRRIGSL SS FSS+LVVRSSSKSHSYIPKL+PFSRSKL
Sbjct: 1   MESSLLRSLSSPLLLESTDLHLRRIGSLPSSRFSSTLVVRSSSKSHSYIPKLEPFSRSKL 60

Query: 61  DRAIKEPPLIQKSENELADYCSTLEGDDSYSCWKAYFELQDLEKESPKQEVEKLILQAGG 120
           DRAIKEPPLI+KSENELADYCSTLEGDDSYSCWKAYFEL+DLEKE+PKQEVEKLILQAGG
Sbjct: 61  DRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKDLEKETPKQEVEKLILQAGG 120

Query: 121 VKSLIGCVHGITAIQKSKGKEKEERKAWKKEVEGRGNRECPIPDGLPKSAEEIEEEEEGR 180
           VKSLIGC+HGITAI KSKGKEKEERKAWK  VEGRGN+ECPIPDGLPKSAEEIEEEE GR
Sbjct: 121 VKSLIGCLHGITAIPKSKGKEKEERKAWKTGVEGRGNKECPIPDGLPKSAEEIEEEEVGR 180

Query: 181 MPDSAFTRLLRSKGTFPAWYSPAPDHETD 210
           MPDSAFTRLLRSKGTFPAWYSPAPDHETD
Sbjct: 181 MPDSAFTRLLRSKGTFPAWYSPAPDHETD 209

[Close]

BLAST of CsaV3_2G014240 vs. ExPASy TrEMBL
Match: A0A6J1FRB4 (CCG-binding protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111448100 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 6.7e-79
Identity = 164/209 (78.47%), Postives = 181/209 (86.60%), Query Frame = 0


Query: 1   MDSSLLRSLSSPLLLESPDLHLRRIGSLSSSPFSSSLVVRSSSKSHSYIPKLQPFSRSKL 60
           M+SSLLRS SSPLLLES DL LRRIGS+SS  F S+ VVR SS+SH+ IPKL+PFSR+KL
Sbjct: 1   MESSLLRSASSPLLLESTDL-LRRIGSVSSPRFPST-VVRCSSRSHASIPKLEPFSRTKL 60

Query: 61  DRAIKEPPLIQKSENELADYCSTLEGDDSYSCWKAYFELQDLEKESPKQEVEKLILQAGG 120
           DRAIK+PPL++KSENELADYCSTL+GDDSYSCWKAYFEL+DLEKESPKQEVEKLILQAGG
Sbjct: 61  DRAIKDPPLVEKSENELADYCSTLDGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGG 120

Query: 121 VKSLIGCVHGITAIQKSKGKEKEERKAWKKEVEGRGNRECPIPDGLPKSAEEIEEEEEGR 180
           VKSLIG +HGI  I K K  E E +K   + VE R  R+CPIPDGLPKSAEEIEEEE  R
Sbjct: 121 VKSLIGLLHGIAGIHKRKESENEAKKPLNR-VE-RRVRDCPIPDGLPKSAEEIEEEEGAR 180

Query: 181 MPDSAFTRLLRSKGTFPAWYSPAPDHETD 210
           MPDS FTRLLRSKGTFPAWY+PAPDHETD
Sbjct: 181 MPDSPFTRLLRSKGTFPAWYTPAPDHETD 205

[Close]

BLAST of CsaV3_2G014240 vs. ExPASy TrEMBL
Match: A0A6J1JH09 (CCG-binding protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111484298 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 5.7e-78
Identity = 163/211 (77.25%), Postives = 179/211 (84.83%), Query Frame = 0


Query: 1   MDSSLLRSLSSPLLLESPDLHLRRIGSLSSSPFSSSLVVRSSSKSHSYIPKLQPFSRSKL 60
           M+SS LRS+SSPLLLES DL LRRIGS SS  F S+ VVR SS+SH+ IPKL+PFSR+KL
Sbjct: 1   MESSFLRSVSSPLLLESTDL-LRRIGSASSPRFPST-VVRCSSRSHASIPKLKPFSRTKL 60

Query: 61  DRAIKEPPLIQKSENELADYCSTLEGDDSYSCWKAYFELQDLEKESPKQEVEKLILQAGG 120
           DRAIK+PPL++KSENELADYCSTL+GDDSYSCWKAYFEL+DLEKESPKQEVEKLILQAGG
Sbjct: 61  DRAIKDPPLVEKSENELADYCSTLDGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGG 120

Query: 121 VKSLIGCVHGITAIQKSKGKEKEERKAWKKEVEG--RGNRECPIPDGLPKSAEEIEEEEE 180
           VKSLIG +HGI  I K K  E E     KK + G  R  R+CPIPDGLPKSAEEIEEEE 
Sbjct: 121 VKSLIGLLHGIAGIHKKKESENEA----KKPLNGVERRVRDCPIPDGLPKSAEEIEEEEG 180

Query: 181 GRMPDSAFTRLLRSKGTFPAWYSPAPDHETD 210
            RMPDS FTRLLRSKGTFPAWY+PAPDHETD
Sbjct: 181 ARMPDSPFTRLLRSKGTFPAWYTPAPDHETD 205

[Close]

BLAST of CsaV3_2G014240 vs. TAIR 10
Match: AT2G15890.1 (maternal effect embryo arrest 14 )

HSP 1 Score: 216.1 bits (549), Expect = 2.7e-56
Identity = 107/172 (62.21%), Postives = 133/172 (77.33%), Query Frame = 0


Query: 38  VVRSSSKSHSYIPKLQPFSRSKLDRAIKEPPLIQKSENELADYCSTLEGDDSYSCWKAYF 97
           VVR SS     +PKL+ FSR K DR +++PPLI+K+E+EL+DYCSTLEGDDSYSCW+AYF
Sbjct: 34  VVRCSSTRD--VPKLELFSRGKFDRILQDPPLIEKAESELSDYCSTLEGDDSYSCWRAYF 93

Query: 98  ELQDLEKESPKQEVEKLILQAGGVKSLIGCVHGITAIQKSKGKEKEERKAWKKEVEGRGN 157
           EL+DLE+E PK EVE LILQ GG+KSLIGC+HG+ +++K    +       + + E   N
Sbjct: 94  ELKDLEREKPKVEVENLILQTGGLKSLIGCLHGVASMEKDNKTKNGLHVGEESDREKGMN 153

Query: 158 RECPIPDGLPKSAEEIEEEEEGRMPDSAFTRLLRSKGTFPAWYSPAPDHETD 210
               IPDGLPKS +E+EEEE+ +MPDSAFTRLLRSKGT PAW+S APDHETD
Sbjct: 154 LHIHIPDGLPKSEQELEEEEKSKMPDSAFTRLLRSKGTIPAWFSHAPDHETD 203

[Close]

BLAST of CsaV3_2G014240 vs. TAIR 10
Match: AT2G15890.2 (maternal effect embryo arrest 14 )

HSP 1 Score: 183.0 bits (463), Expect = 2.6e-46
Identity = 98/172 (56.98%), Postives = 117/172 (68.02%), Query Frame = 0


Query: 38  VVRSSSKSHSYIPKLQPFSRSKLDRAIKEPPLIQKSENELADYCSTLEGDDSYSCWKAYF 97
           VVR SS     +PKL+ FSR K DR +++PPLI+K+E+EL+DYCSTLEGDDSYSCW+AYF
Sbjct: 34  VVRCSSTRD--VPKLELFSRGKFDRILQDPPLIEKAESELSDYCSTLEGDDSYSCWRAYF 93

Query: 98  ELQDLEKESPKQEVEKLILQAGGVKSLIGCVHGITAIQKSKGKEKEERKAWKKEVEGRGN 157
           EL+DLE+E PK EVE LILQ                     G+E +  K          N
Sbjct: 94  ELKDLEREKPKVEVENLILQT--------------------GEESDREKGM--------N 153

Query: 158 RECPIPDGLPKSAEEIEEEEEGRMPDSAFTRLLRSKGTFPAWYSPAPDHETD 210
               IPDGLPKS +E+EEEE+ +MPDSAFTRLLRSKGT PAW+S APDHETD
Sbjct: 154 LHIHIPDGLPKSEQELEEEEKSKMPDSAFTRLLRSKGTIPAWFSHAPDHETD 175

The following BLAST results are available for this feature:

BLAST of CsaV3_2G014240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004153261.1	6.2e-111	100.00	CCG-binding protein 1 [Cucumis sativus] >KGN61745.1 hypothetical protein Csa_006...	[more]
XP_008459226.1	2.4e-102	92.82	PREDICTED: CCG-binding protein 1 [Cucumis melo] >KAA0045998.1 CCG-binding protei...	[more]
XP_038877912.1	3.4e-93	87.56	CCG-binding protein 1 [Benincasa hispida]	[more]
XP_022943281.1	1.4e-78	78.47	CCG-binding protein 1 [Cucurbita moschata] >KAG6571149.1 CCG-binding protein 1, ...	[more]
XP_023512041.1	2.4e-78	77.73	CCG-binding protein 1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_2G014240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XIM0	3.8e-55	62.21	CCG-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=MEE14 PE=1 SV=1	[more]

BLAST of CsaV3_2G014240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIJ6	3.0e-111	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G237150 PE=4 SV=1	[more]
A0A5A7TT03	1.1e-102	92.82	CCG-binding protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29...	[more]
A0A1S3C971	1.1e-102	92.82	CCG-binding protein 1 OS=Cucumis melo OX=3656 GN=LOC103498415 PE=4 SV=1	[more]
A0A6J1FRB4	6.7e-79	78.47	CCG-binding protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111448100 PE=4 SV=1	[more]
A0A6J1JH09	5.7e-78	77.25	CCG-binding protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111484298 PE=4 SV=1	[more]

BLAST of CsaV3_2G014240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G15890.1	2.7e-56	62.21	maternal effect embryo arrest 14	[more]
AT2G15890.2	2.6e-46	56.98	maternal effect embryo arrest 14	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..158
IPR037502	CCG-binding protein 1	PANTHER	PTHR36345	CCG-BINDING PROTEIN 1	coord: 4..209

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G014240.1	CsaV3_2G014240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010183	pollen tube guidance
molecular_function	GO:0036033	mediator complex binding