CsGy7G005980 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy7G005980
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	RING-type domain-containing protein
Location	Gy14Chr7: 4410754 .. 4411557 (-)
RNA-Seq Expression	CsGy7G005980
Synteny	CsGy7G005980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGAACAAATCTTTGGTCCTTGCAGATATGGTTCTGGTTCCTATATAGGTATGTCACTAAGAATTACTGATCCTGACCTAAGGCATCAACCACAAAGCCAAATTCGAACGCCACCCAACTCGCCAACACTTGTCAAACAAATCGATCTGAATTTCAAAGTTGAAGTAAAATGCCAACACTACTTTCAAGCAGGTGAAGGAGGCAACAGTACATTTGCAACAGCTTTACTTAGTGAACACATAAGTTCACATCATCCCTTGCCAACTTTGCAACTTCCTGTCTCCATCTTCAAGCATGGTGACAAAACTTTGAAGCGGTTACTTTTTCGGGAGTTTCAAATTTATAGAGCCATCATCAACATTGAACTTGTGGTTGACGAAATAATAAAACATTGGGTTAAAAAAGTAGATGAAGAGAATAGTACTTCTCAGGTGTTTGAAGAGATTTATCCTCTCGAAATTACGATAGAGTTGTTGGTTTATCAAATGATTCATGCAATAGACCAACCACATGAAATTATGATGGATCAACCACAAGTGATGATGGTTCCAACAAGCGAGAGTGCTATGGAGAGTATGCTGAAGAAAGTGGAAAACGAAGAAATAGTGAAATTTGGCGACAACAAAAGCATTAATTGTGTTATCTGTTTGGAAGAGATTAGTAAAGAGAAGAAAGGAAGTGAGGCAGTGGTGTTACAGATGCCATGCTTGCATATGTTTCATGAAGAATGCATAAGGAAGTGGTTGAAGAGAAGTCATTACTGTCCAACTTGTAGATTTTCAATGCCTACAAACAATTGA

mRNA sequence

ATGGCCGAACAAATCTTTGGTCCTTGCAGATATGGTTCTGGTTCCTATATAGGTATGTCACTAAGAATTACTGATCCTGACCTAAGGCATCAACCACAAAGCCAAATTCGAACGCCACCCAACTCGCCAACACTTGTCAAACAAATCGATCTGAATTTCAAAGTTGAAGTAAAATGCCAACACTACTTTCAAGCAGGTGAAGGAGGCAACAGTACATTTGCAACAGCTTTACTTAGTGAACACATAAGTTCACATCATCCCTTGCCAACTTTGCAACTTCCTGTCTCCATCTTCAAGCATGGTGACAAAACTTTGAAGCGGTTACTTTTTCGGGAGTTTCAAATTTATAGAGCCATCATCAACATTGAACTTGTGGTTGACGAAATAATAAAACATTGGGTTAAAAAAGTAGATGAAGAGAATAGTACTTCTCAGGTGTTTGAAGAGATTTATCCTCTCGAAATTACGATAGAGTTGTTGGTTTATCAAATGATTCATGCAATAGACCAACCACATGAAATTATGATGGATCAACCACAAGTGATGATGGTTCCAACAAGCGAGAGTGCTATGGAGAGTATGCTGAAGAAAGTGGAAAACGAAGAAATAGTGAAATTTGGCGACAACAAAAGCATTAATTGTGTTATCTGTTTGGAAGAGATTAGTAAAGAGAAGAAAGGAAGTGAGGCAGTGGTGTTACAGATGCCATGCTTGCATATGTTTCATGAAGAATGCATAAGGAAGTGGTTGAAGAGAAGTCATTACTGTCCAACTTGTAGATTTTCAATGCCTACAAACAATTGA

Coding sequence (CDS)

ATGGCCGAACAAATCTTTGGTCCTTGCAGATATGGTTCTGGTTCCTATATAGGTATGTCACTAAGAATTACTGATCCTGACCTAAGGCATCAACCACAAAGCCAAATTCGAACGCCACCCAACTCGCCAACACTTGTCAAACAAATCGATCTGAATTTCAAAGTTGAAGTAAAATGCCAACACTACTTTCAAGCAGGTGAAGGAGGCAACAGTACATTTGCAACAGCTTTACTTAGTGAACACATAAGTTCACATCATCCCTTGCCAACTTTGCAACTTCCTGTCTCCATCTTCAAGCATGGTGACAAAACTTTGAAGCGGTTACTTTTTCGGGAGTTTCAAATTTATAGAGCCATCATCAACATTGAACTTGTGGTTGACGAAATAATAAAACATTGGGTTAAAAAAGTAGATGAAGAGAATAGTACTTCTCAGGTGTTTGAAGAGATTTATCCTCTCGAAATTACGATAGAGTTGTTGGTTTATCAAATGATTCATGCAATAGACCAACCACATGAAATTATGATGGATCAACCACAAGTGATGATGGTTCCAACAAGCGAGAGTGCTATGGAGAGTATGCTGAAGAAAGTGGAAAACGAAGAAATAGTGAAATTTGGCGACAACAAAAGCATTAATTGTGTTATCTGTTTGGAAGAGATTAGTAAAGAGAAGAAAGGAAGTGAGGCAGTGGTGTTACAGATGCCATGCTTGCATATGTTTCATGAAGAATGCATAAGGAAGTGGTTGAAGAGAAGTCATTACTGTCCAACTTGTAGATTTTCAATGCCTACAAACAATTGA

Protein sequence

MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQHYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAIINIELVVDEIIKHWVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFHEECIRKWLKRSHYCPTCRFSMPTNN*

Homology

[Close]

BLAST of CsGy7G005980 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 9.1e-09
Identity = 29/83 (34.94%), Postives = 53/83 (63.86%), Query Frame = 0


Query: 185 PTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFHEE 244
           P S+SA++++      ++++K   N+   C +C++E    + GS+  V QMPC H+FH++
Sbjct: 190 PASKSAIDALPTVKVTKDMLKSEMNQ---CAVCMDEF---EDGSD--VKQMPCKHVFHQD 249

Query: 245 CIRKWLKRSHYCPTCRFSMPTNN 268
           C+  WL+  + CP CRF +PT++
Sbjct: 250 CLLPWLELHNSCPVCRFELPTDD 264

[Close]

BLAST of CsGy7G005980 vs. ExPASy Swiss-Prot
Match: Q940T5 (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 5.9e-08
Identity = 30/81 (37.04%), Postives = 41/81 (50.62%), Query Frame = 0


Query: 185 PTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFHEE 244
           P S+SA+ES+       EI         NC +C E    E +  E     MPC H+FH++
Sbjct: 174 PASKSAIESL----PRVEISDCHIGSEANCAVCTEIFETETEARE-----MPCKHLFHDD 233

Query: 245 CIRKWLKRSHYCPTCRFSMPT 266
           CI  WL   + CP CRF +P+
Sbjct: 234 CIVPWLSIRNSCPVCRFELPS 245

[Close]

BLAST of CsGy7G005980 vs. ExPASy Swiss-Prot
Match: Q9LQX2 (E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.3e-07
Identity = 27/53 (50.94%), Postives = 30/53 (56.60%), Query Frame = 0


Query: 214 CVICLEEISKEKKGSEAVVLQMPCLHMFHEECIRKWLKRSHYCPTCRFSMPTN 267
           CVICLEE       SE  V +MPC H FH  CI KWL     CP CR+ MP +
Sbjct: 113 CVICLEEWK-----SEETVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYEMPVD 160

[Close]

BLAST of CsGy7G005980 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.3e-07
Identity = 29/84 (34.52%), Postives = 50/84 (59.52%), Query Frame = 0


Query: 185 PTSESAMESMLKKVENEEIVKFGDNKSIN-CVICLEEISKEKKGSEAVVLQMPCLHMFHE 244
           P S+SA+E++        I K   N   N C +C+++    ++G+EA   QMPC H++H+
Sbjct: 198 PASKSAIEAL----PLVNITKSNLNSEFNQCAVCMDDF---EEGTEA--KQMPCKHLYHK 257

Query: 245 ECIRKWLKRSHYCPTCRFSMPTNN 268
           +C+  WL+  + CP CR  +PT++
Sbjct: 258 DCLLPWLELHNSCPVCRHELPTDD 272

[Close]

BLAST of CsGy7G005980 vs. ExPASy Swiss-Prot
Match: Q3T0W3 (E3 ubiquitin-protein ligase RNF181 OS=Bos taurus OX=9913 GN=RNF181 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.3e-07
Identity = 27/94 (28.72%), Postives = 51/94 (54.26%), Query Frame = 0


Query: 174 IMMDQPQVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVL 233
           +++D    +  P +++A+E++ + V        G    + C +CL E  +E+       +
Sbjct: 42  LVVDWDHHLPPPAAKTAVENLPRTVIR------GSQAELKCPVCLLEFEEEE-----TAI 101

Query: 234 QMPCLHMFHEECIRKWLKRSHYCPTCRFSMPTNN 268
           +MPC H+FH  CI  WL +++ CP CR  +PT++
Sbjct: 102 EMPCHHLFHSNCILPWLSKTNSCPLCRHELPTDD 124

[Close]

BLAST of CsGy7G005980 vs. NCBI nr
Match: KAE8645828.1 (hypothetical protein Csa_017274 [Cucumis sativus])

HSP 1 Score: 522 bits (1344), Expect = 1.33e-182
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0


Query: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60
           MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ
Sbjct: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60

Query: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120
           HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII
Sbjct: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120

Query: 121 NIELVVDEIIKHWVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQ 180
           NIELVVDEIIKHWVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQ
Sbjct: 121 NIELVVDEIIKHWVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQ 180

Query: 181 VMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHM 240
           VMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHM
Sbjct: 181 VMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHM 240

Query: 241 FHEECIRKWLKRSHYCPT 258
           FHEECIRKWLKRSHYCPT
Sbjct: 241 FHEECIRKWLKRSHYCPT 258

[Close]

BLAST of CsGy7G005980 vs. NCBI nr
Match: KGN43799.1 (hypothetical protein Csa_017222 [Cucumis sativus])

HSP 1 Score: 380 bits (977), Expect = 1.16e-130
Identity = 196/268 (73.13%), Postives = 223/268 (83.21%), Query Frame = 0


Query: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60
           MAE  F  C   +G ++GMSLRITDPDL  QPQSQ +TP NSPT VKQI+L  KVEVKCQ
Sbjct: 1   MAEHNFDDCM-STGCFMGMSLRITDPDLSLQPQSQNQTPHNSPTFVKQINLKLKVEVKCQ 60

Query: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120
           H FQA E G+ TFA+ L+ EHI SHHP PT QLPVS+F+HG++TLKRLLF++FQI+R II
Sbjct: 61  H-FQADEEGD-TFASTLMIEHIVSHHPFPTFQLPVSVFRHGNRTLKRLLFQQFQIFRGII 120

Query: 121 NIELVVDEIIKHWVKKV-DEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQP 180
           NI+LV DEII+HWVKK  D EN++  + EEIYPLEITIELL+ +MIHAIDQP E + DQP
Sbjct: 121 NIQLVADEIIEHWVKKEEDRENNSGVLLEEIYPLEITIELLLLRMIHAIDQPEETI-DQP 180

Query: 181 QVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLH 240
           QV MVP SESAMESMLK+VE EEIVK G++KSINCVICLEEISK+ KGSE VVLQMPCLH
Sbjct: 181 QVTMVPASESAMESMLKRVEKEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLH 240

Query: 241 MFHEECIRKWLKRSHYCPTCRFSMPTNN 267
           MFHEECIR WLK SHYCPTCRFSMP NN
Sbjct: 241 MFHEECIRTWLKTSHYCPTCRFSMPINN 264

[Close]

BLAST of CsGy7G005980 vs. NCBI nr
Match: ADN34252.1 (hypothetical zinc finger protein [Cucumis melo subsp. melo] >KAA0031412.1 putative zinc finger protein [Cucumis melo var. makuwa] >TYK06863.1 putative zinc finger protein [Cucumis melo var. makuwa])

HSP 1 Score: 362 bits (929), Expect = 2.34e-123
Identity = 187/271 (69.00%), Postives = 224/271 (82.66%), Query Frame = 0


Query: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60
           MAE+IF  CRYGSGSY+GMSLRITDP+ RHQP +QI    +SPTLV+QI L FKV++KCQ
Sbjct: 1   MAEEIFNICRYGSGSYMGMSLRITDPNPRHQPLNQIDQT-SSPTLVEQICLKFKVQLKCQ 60

Query: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120
           H FQ  EGGN   +T L+ EHI S H   T QLP+SIFKHGDKTLKR+LFREF++Y  II
Sbjct: 61  H-FQVWEGGNG-HSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDII 120

Query: 121 NIELVVDEIIKHWVKKV----DEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMM 180
           NIEL+ +EIIKHWV+KV    D+EN+++ +F++IYPLEI I LLV +MI A+ QP   M+
Sbjct: 121 NIELLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAV-QPRLAMI 180

Query: 181 DQPQVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMP 240
           DQP  +MVPTS+SA+ESMLK+VENEEI+K GD++SINCV+CLEEISKE+KGSE  VLQMP
Sbjct: 181 DQP--LMVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMP 240

Query: 241 CLHMFHEECIRKWLKRSHYCPTCRFSMPTNN 267
           CLHMFHEECIRKWLK SHYCPTCRFSMP +N
Sbjct: 241 CLHMFHEECIRKWLKTSHYCPTCRFSMPIDN 265

[Close]

BLAST of CsGy7G005980 vs. NCBI nr
Match: ADN34253.1 (hypothetical zinc finger protein [Cucumis melo subsp. melo] >TYK06864.1 putative zinc finger protein [Cucumis melo var. makuwa])

HSP 1 Score: 355 bits (911), Expect = 1.07e-120
Identity = 193/271 (71.22%), Postives = 222/271 (81.92%), Query Frame = 0


Query: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRH-QPQSQIRTPPNSPTLVKQIDLNFKVEVKC 60
           MAEQ    C   +G Y+GMSLRITDPDLRH QPQSQI+T PNSP LVKQIDLNFK++VKC
Sbjct: 1   MAEQNLDACM-SAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKC 60

Query: 61  QHYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAI 120
           QH F AGE G STFAT LLSEHI S    P LQLP+SIFK GDKTLKRLLF++FQ++R I
Sbjct: 61  QH-FGAGEEG-STFATTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGI 120

Query: 121 INIELVVDEIIKHWVKKVDEEN-STSQVFEEIYPLEITIELLVYQMIHAI-DQPHEIMMD 180
           +N+ELVVDEIIKHW++KV+E+  + S+VF EIYPLEI IELLV +MI AI DQP E    
Sbjct: 121 VNVELVVDEIIKHWIRKVEEDQENNSRVFAEIYPLEIRIELLVCRMIPAIIDQPQE---- 180

Query: 181 QPQVMMVPTSESAMESMLKKVEN-EEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMP 240
              VMMVPTS++AMESMLK+VEN EE++K GD+ SI+CVICLE+I KE+K S  VVLQMP
Sbjct: 181 ---VMMVPTSDNAMESMLKRVENNEELMKLGDD-SIDCVICLEKIGKEEKRSGRVVLQMP 240

Query: 241 CLHMFHEECIRKWLKRSHYCPTCRFSMPTNN 267
           CLHMFHEECIRKWLK SH+CPTCRFSMP NN
Sbjct: 241 CLHMFHEECIRKWLKTSHFCPTCRFSMPINN 260

[Close]

BLAST of CsGy7G005980 vs. NCBI nr
Match: KAA0031413.1 (putative zinc finger protein [Cucumis melo var. makuwa])

HSP 1 Score: 354 bits (908), Expect = 3.07e-120
Identity = 192/271 (70.85%), Postives = 223/271 (82.29%), Query Frame = 0


Query: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRH-QPQSQIRTPPNSPTLVKQIDLNFKVEVKC 60
           MAEQ    C   +G Y+GMSLRITDPDLRH QPQSQI+T PNSP LVKQIDLNFK++VKC
Sbjct: 1   MAEQNLDACM-SAGYYMGMSLRITDPDLRHRQPQSQIQTQPNSPALVKQIDLNFKLQVKC 60

Query: 61  QHYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAI 120
           QH F AGE G STFAT LLSEHI S    P LQLP+SIFK GDKTLKRLLF++FQ++R I
Sbjct: 61  QH-FGAGEEG-STFATTLLSEHIISQPTFPALQLPISIFKRGDKTLKRLLFQKFQMFRGI 120

Query: 121 INIELVVDEIIKHWVKKVDEEN-STSQVFEEIYPLEITIELLVYQMIHAI-DQPHEIMMD 180
           +N+ELVVDEIIKHW++KV+E+  ++S+VF EIYPLEI IELLV +MI AI DQP E    
Sbjct: 121 VNVELVVDEIIKHWIRKVEEDQENSSRVFAEIYPLEIRIELLVCRMIPAIIDQPQE---- 180

Query: 181 QPQVMMVPTSESAMESMLKKVEN-EEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMP 240
              VMMVPTS++AMESMLK+VEN +E++K GD+ SI+CVICLE+I KE+K S  VVLQMP
Sbjct: 181 ---VMMVPTSDNAMESMLKRVENNKELMKLGDD-SIDCVICLEKIGKEEKRSGRVVLQMP 240

Query: 241 CLHMFHEECIRKWLKRSHYCPTCRFSMPTNN 267
           CLHMFHEECIRKWLK SH+CPTCRFSMP NN
Sbjct: 241 CLHMFHEECIRKWLKTSHFCPTCRFSMPINN 260

[Close]

BLAST of CsGy7G005980 vs. ExPASy TrEMBL
Match: A0A0A0K7L0 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G067560 PE=4 SV=1)

HSP 1 Score: 542 bits (1397), Expect = 6.22e-195
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0


Query: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60
           MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ
Sbjct: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60

Query: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120
           HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII
Sbjct: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120

Query: 121 NIELVVDEIIKHWVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQ 180
           NIELVVDEIIKHWVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQ
Sbjct: 121 NIELVVDEIIKHWVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQ 180

Query: 181 VMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHM 240
           VMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHM
Sbjct: 181 VMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHM 240

Query: 241 FHEECIRKWLKRSHYCPTCRFSMPTNN 267
           FHEECIRKWLKRSHYCPTCRFSMPTNN
Sbjct: 241 FHEECIRKWLKRSHYCPTCRFSMPTNN 267

[Close]

BLAST of CsGy7G005980 vs. ExPASy TrEMBL
Match: A0A0A0K493 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G067540 PE=4 SV=1)

HSP 1 Score: 380 bits (977), Expect = 5.64e-131
Identity = 196/268 (73.13%), Postives = 223/268 (83.21%), Query Frame = 0


Query: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60
           MAE  F  C   +G ++GMSLRITDPDL  QPQSQ +TP NSPT VKQI+L  KVEVKCQ
Sbjct: 1   MAEHNFDDCM-STGCFMGMSLRITDPDLSLQPQSQNQTPHNSPTFVKQINLKLKVEVKCQ 60

Query: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120
           H FQA E G+ TFA+ L+ EHI SHHP PT QLPVS+F+HG++TLKRLLF++FQI+R II
Sbjct: 61  H-FQADEEGD-TFASTLMIEHIVSHHPFPTFQLPVSVFRHGNRTLKRLLFQQFQIFRGII 120

Query: 121 NIELVVDEIIKHWVKKV-DEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQP 180
           NI+LV DEII+HWVKK  D EN++  + EEIYPLEITIELL+ +MIHAIDQP E + DQP
Sbjct: 121 NIQLVADEIIEHWVKKEEDRENNSGVLLEEIYPLEITIELLLLRMIHAIDQPEETI-DQP 180

Query: 181 QVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLH 240
           QV MVP SESAMESMLK+VE EEIVK G++KSINCVICLEEISK+ KGSE VVLQMPCLH
Sbjct: 181 QVTMVPASESAMESMLKRVEKEEIVKVGEDKSINCVICLEEISKKMKGSEGVVLQMPCLH 240

Query: 241 MFHEECIRKWLKRSHYCPTCRFSMPTNN 267
           MFHEECIR WLK SHYCPTCRFSMP NN
Sbjct: 241 MFHEECIRTWLKTSHYCPTCRFSMPINN 264

[Close]

BLAST of CsGy7G005980 vs. ExPASy TrEMBL
Match: A0A0A0K2A1 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G067550 PE=4 SV=1)

HSP 1 Score: 375 bits (964), Expect = 3.77e-129
Identity = 200/268 (74.63%), Postives = 223/268 (83.21%), Query Frame = 0


Query: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60
           MAEQ F  C   SG Y+GMSLRITDP         I+T  NSPT VKQIDLNFKVEVKCQ
Sbjct: 1   MAEQNFDDCT--SGYYMGMSLRITDP---------IQTRSNSPTSVKQIDLNFKVEVKCQ 60

Query: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120
           H FQAGE  ++TFAT  LSEHI +H P P LQLPVSIFKHGDKTLKRLLF++FQ++RAII
Sbjct: 61  H-FQAGEE-DTTFATTFLSEHIIAHQPFPALQLPVSIFKHGDKTLKRLLFQKFQMFRAII 120

Query: 121 NIELVVDEIIKHWVKKV-DEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQP 180
           NIELV D+IIKHWVKKV D++ + S VFEEIYPLEITIE+LV QMI A+DQP E + DQP
Sbjct: 121 NIELVTDQIIKHWVKKVEDDKENNSGVFEEIYPLEITIEVLVLQMIDAVDQPQETI-DQP 180

Query: 181 QVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLH 240
           QV MVPTS+SAM+SMLK+VENEEI+K GD KSI+CVICLE+ISKE+KGSE VVLQMPCLH
Sbjct: 181 QVRMVPTSDSAMKSMLKRVENEEIMKVGDYKSISCVICLEKISKEEKGSEGVVLQMPCLH 240

Query: 241 MFHEECIRKWLKRSHYCPTCRFSMPTNN 267
           MFHEECIRKWLK SHYCPTCRFSM  NN
Sbjct: 241 MFHEECIRKWLKTSHYCPTCRFSMTINN 254

[Close]

BLAST of CsGy7G005980 vs. ExPASy TrEMBL
Match: A0A5D3C4K6 (Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001670 PE=4 SV=1)

HSP 1 Score: 362 bits (929), Expect = 1.13e-123
Identity = 187/271 (69.00%), Postives = 224/271 (82.66%), Query Frame = 0


Query: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60
           MAE+IF  CRYGSGSY+GMSLRITDP+ RHQP +QI    +SPTLV+QI L FKV++KCQ
Sbjct: 1   MAEEIFNICRYGSGSYMGMSLRITDPNPRHQPLNQIDQT-SSPTLVEQICLKFKVQLKCQ 60

Query: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120
           H FQ  EGGN   +T L+ EHI S H   T QLP+SIFKHGDKTLKR+LFREF++Y  II
Sbjct: 61  H-FQVWEGGNG-HSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDII 120

Query: 121 NIELVVDEIIKHWVKKV----DEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMM 180
           NIEL+ +EIIKHWV+KV    D+EN+++ +F++IYPLEI I LLV +MI A+ QP   M+
Sbjct: 121 NIELLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAV-QPRLAMI 180

Query: 181 DQPQVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMP 240
           DQP  +MVPTS+SA+ESMLK+VENEEI+K GD++SINCV+CLEEISKE+KGSE  VLQMP
Sbjct: 181 DQP--LMVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMP 240

Query: 241 CLHMFHEECIRKWLKRSHYCPTCRFSMPTNN 267
           CLHMFHEECIRKWLK SHYCPTCRFSMP +N
Sbjct: 241 CLHMFHEECIRKWLKTSHYCPTCRFSMPIDN 265

[Close]

BLAST of CsGy7G005980 vs. ExPASy TrEMBL
Match: E5GCQ3 (Hypothetical zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 362 bits (929), Expect = 1.13e-123
Identity = 187/271 (69.00%), Postives = 224/271 (82.66%), Query Frame = 0


Query: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60
           MAE+IF  CRYGSGSY+GMSLRITDP+ RHQP +QI    +SPTLV+QI L FKV++KCQ
Sbjct: 1   MAEEIFNICRYGSGSYMGMSLRITDPNPRHQPLNQIDQT-SSPTLVEQICLKFKVQLKCQ 60

Query: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120
           H FQ  EGGN   +T L+ EHI S H   T QLP+SIFKHGDKTLKR+LFREF++Y  II
Sbjct: 61  H-FQVWEGGNG-HSTTLVREHIRSQHSFATFQLPISIFKHGDKTLKRILFREFKMYGDII 120

Query: 121 NIELVVDEIIKHWVKKV----DEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMM 180
           NIEL+ +EIIKHWV+KV    D+EN+++ +F++IYPLEI I LLV +MI A+ QP   M+
Sbjct: 121 NIELLANEIIKHWVRKVEEEEDQENNSNVLFKKIYPLEIMIRLLVSKMIRAV-QPRLAMI 180

Query: 181 DQPQVMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMP 240
           DQP  +MVPTS+SA+ESMLK+VENEEI+K GD++SINCV+CLEEISKE+KGSE  VLQMP
Sbjct: 181 DQP--LMVPTSDSAVESMLKRVENEEIMKSGDDESINCVVCLEEISKEEKGSETTVLQMP 240

Query: 241 CLHMFHEECIRKWLKRSHYCPTCRFSMPTNN 267
           CLHMFHEECIRKWLK SHYCPTCRFSMP +N
Sbjct: 241 CLHMFHEECIRKWLKTSHYCPTCRFSMPIDN 265

[Close]

BLAST of CsGy7G005980 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 62.4 bits (150), Expect = 6.4e-10
Identity = 29/83 (34.94%), Postives = 53/83 (63.86%), Query Frame = 0


Query: 185 PTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFHEE 244
           P S+SA++++      ++++K   N+   C +C++E    + GS+  V QMPC H+FH++
Sbjct: 190 PASKSAIDALPTVKVTKDMLKSEMNQ---CAVCMDEF---EDGSD--VKQMPCKHVFHQD 249

Query: 245 CIRKWLKRSHYCPTCRFSMPTNN 268
           C+  WL+  + CP CRF +PT++
Sbjct: 250 CLLPWLELHNSCPVCRFELPTDD 264

[Close]

BLAST of CsGy7G005980 vs. TAIR 10
Match: AT5G37270.1 (RING/U-box superfamily protein )

HSP 1 Score: 60.5 bits (145), Expect = 2.4e-09
Identity = 28/82 (34.15%), Postives = 46/82 (56.10%), Query Frame = 0


Query: 182 MMVPTSESAMESMLKKVENEEIVKF---GDNKSINCVICLEEISKEKKGSEAVVLQMPCL 241
           +M+P+       M +++  E+ ++F   GD +   C ICLE+ S+     + ++L   C 
Sbjct: 118 VMLPSIAVPSRDMFQRLLEEQTMEFTDLGDEEETTCSICLEDFSESH--DDNIILLPDCF 177

Query: 242 HMFHEECIRKWLKRSHYCPTCR 261
           H+FH+ CI +WLKR   CP CR
Sbjct: 178 HLFHQSCIFEWLKRQRSCPLCR 197

[Close]

BLAST of CsGy7G005980 vs. TAIR 10
Match: AT5G37230.1 (RING/U-box superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 3.2e-09
Identity = 28/82 (34.15%), Postives = 44/82 (53.66%), Query Frame = 0


Query: 182 MMVPTSESAMESMLKKVENE---EIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCL 241
           +M+P+       M +++  E   E+   GD +   C IC+E+ S+     + ++L   C 
Sbjct: 118 VMLPSIVVRSRDMFQRLLEEQTMELTNLGDEEETTCSICMEDFSESH--DDNIILLPDCF 177

Query: 242 HMFHEECIRKWLKRSHYCPTCR 261
           H+FH+ CI KWLKR   CP CR
Sbjct: 178 HLFHQSCIFKWLKRQRSCPLCR 197

[Close]

BLAST of CsGy7G005980 vs. TAIR 10
Match: AT5G59550.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 59.7 bits (143), Expect = 4.2e-09
Identity = 30/81 (37.04%), Postives = 41/81 (50.62%), Query Frame = 0


Query: 185 PTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAVVLQMPCLHMFHEE 244
           P S+SA+ES+       EI         NC +C E    E +  E     MPC H+FH++
Sbjct: 174 PASKSAIESL----PRVEISDCHIGSEANCAVCTEIFETETEARE-----MPCKHLFHDD 233

Query: 245 CIRKWLKRSHYCPTCRFSMPT 266
           CI  WL   + CP CRF +P+
Sbjct: 234 CIVPWLSIRNSCPVCRFELPS 245

[Close]

BLAST of CsGy7G005980 vs. TAIR 10
Match: AT1G26800.1 (RING/U-box superfamily protein )

HSP 1 Score: 58.5 bits (140), Expect = 9.3e-09
Identity = 27/53 (50.94%), Postives = 30/53 (56.60%), Query Frame = 0


Query: 214 CVICLEEISKEKKGSEAVVLQMPCLHMFHEECIRKWLKRSHYCPTCRFSMPTN 267
           CVICLEE       SE  V +MPC H FH  CI KWL     CP CR+ MP +
Sbjct: 113 CVICLEEWK-----SEETVKEMPCKHRFHGGCIEKWLGFHGSCPVCRYEMPVD 160

The following BLAST results are available for this feature:

BLAST of CsGy7G005980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LPN7	9.1e-09	34.94	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
Q940T5	5.9e-08	37.04	E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ...	[more]
Q9LQX2	1.3e-07	50.94	E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 ...	[more]
P0CH30	1.3e-07	34.52	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
Q3T0W3	1.3e-07	28.72	E3 ubiquitin-protein ligase RNF181 OS=Bos taurus OX=9913 GN=RNF181 PE=2 SV=1	[more]

BLAST of CsGy7G005980 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8645828.1	1.33e-182	100.00	hypothetical protein Csa_017274 [Cucumis sativus]	[more]
KGN43799.1	1.16e-130	73.13	hypothetical protein Csa_017222 [Cucumis sativus]	[more]
ADN34252.1	2.34e-123	69.00	hypothetical zinc finger protein [Cucumis melo subsp. melo] >KAA0031412.1 putati...	[more]
ADN34253.1	1.07e-120	71.22	hypothetical zinc finger protein [Cucumis melo subsp. melo] >TYK06864.1 putative...	[more]
KAA0031413.1	3.07e-120	70.85	putative zinc finger protein [Cucumis melo var. makuwa]	[more]

BLAST of CsGy7G005980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7L0	6.22e-195	100.00	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G067560 P...	[more]
A0A0A0K493	5.64e-131	73.13	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G067540 P...	[more]
A0A0A0K2A1	3.77e-129	74.63	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G067550 P...	[more]
A0A5D3C4K6	1.13e-123	69.00	Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
E5GCQ3	1.13e-123	69.00	Hypothetical zinc finger protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

BLAST of CsGy7G005980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19950.1	6.4e-10	34.94	RING/U-box superfamily protein	[more]
AT5G37270.1	2.4e-09	34.15	RING/U-box superfamily protein	[more]
AT5G37230.1	3.2e-09	34.15	RING/U-box superfamily protein	[more]
AT5G59550.1	4.2e-09	37.04	zinc finger (C3HC4-type RING finger) family protein	[more]
AT1G26800.1	9.3e-09	50.94	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 214..259 e-value: 2.6E-8 score: 43.6
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 213..260 e-value: 1.6E-12 score: 47.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 214..260 score: 13.079398
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 213..260 e-value: 0.0034 score: 11.2
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 173..266 e-value: 3.5E-18 score: 67.0
None	No IPR available	PANTHER	PTHR15710:SF63	RING/U-BOX SUPERFAMILY PROTEIN	coord: 150..265
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 150..265
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 197..264

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G005980.1	CsGy7G005980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0008270	zinc ion binding