CsGy7G003930 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy7G003930
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionWound-responsive family protein
LocationGy14Chr7: 2965502 .. 2965812 (+)
RNA-Seq ExpressionCsGy7G003930
SyntenyCsGy7G003930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTACCTGAACAGAGTTGGAATGGCGGCCAGTGTGGCTGTGGCTCAAGGCCATACCGAGATCGGACACAAGTGGAAGTCTGGACTTAAATCTCTTCGACAAGGTCGGAGACTTTTGTCCTCCGGCGATAATTCGGCGGATCTCCGTCCACTGTCCAGTTTGGTTGGATCGGAAGGCTCTGGAAGTGTGCGGAGCTGTGACGTTGACGAGAGGATAGCACAATCGGAGGATTCTCTCCGGAGAGTTATGTACTTGAACTGTTGGGGCCAAGGGTGATTGGCTTCTAGGTCACTTTTGGTGACATGTAG

mRNA sequence

ATGAGTTACCTGAACAGAGTTGGAATGGCGGCCAGTGTGGCTGTGGCTCAAGGCCATACCGAGATCGGACACAAGTGGAAGTCTGGACTTAAATCTCTTCGACAAGGTCGGAGACTTTTGTCCTCCGGCGATAATTCGGCGGATCTCCGTCCACTGTCCAGTTTGGTTGGATCGGAAGGCTCTGGAAGTGTGCGGAGCTGTGACGTCACTTTTGGTGACATGTAG

Coding sequence (CDS)

ATGAGTTACCTGAACAGAGTTGGAATGGCGGCCAGTGTGGCTGTGGCTCAAGGCCATACCGAGATCGGACACAAGTGGAAGTCTGGACTTAAATCTCTTCGACAAGGTCGGAGACTTTTGTCCTCCGGCGATAATTCGGCGGATCTCCGTCCACTGTCCAGTTTGGTTGGATCGGAAGGCTCTGGAAGTGTGCGGAGCTGTGACGTCACTTTTGGTGACATGTAG

Protein sequence

MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGDNSADLRPLSSLVGSEGSGSVRSCDVTFGDM*
Homology
BLAST of CsGy7G003930 vs. NCBI nr
Match: KAA0031600.1 (wound-responsive family protein [Cucumis melo var. makuwa] >TYK07052.1 wound-responsive family protein [Cucumis melo var. makuwa])

HSP 1 Score: 134 bits (336), Expect = 6.91e-39
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 0

Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGDNSADLRPLSSLVGSEG 60
          MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSG+NSADLRPLSSLVGSEG
Sbjct: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG 60

Query: 61 SGSVRSCDV 69
          SGSVRSCDV
Sbjct: 61 SGSVRSCDV 69

BLAST of CsGy7G003930 vs. NCBI nr
Match: KAE8645762.1 (hypothetical protein Csa_020269 [Cucumis sativus])

HSP 1 Score: 134 bits (336), Expect = 3.41e-38
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 0

Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGDNSADLRPLSSLVGSEG 60
          MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSG+NSADLRPLSSLVGSEG
Sbjct: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG 60

Query: 61 SGSVRSCDV 69
          SGSVRSCDV
Sbjct: 61 SGSVRSCDV 69

BLAST of CsGy7G003930 vs. NCBI nr
Match: KAG7011951.1 (hypothetical protein SDJN02_26859, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 123 bits (309), Expect = 9.07e-35
Identity = 63/68 (92.65%), Postives = 65/68 (95.59%), Query Frame = 0

Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGDNSADLRPLSSLVGSEG 60
          MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSG+N ADLRPLSSLVGSEG
Sbjct: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENPADLRPLSSLVGSEG 60

Query: 61 SGSVRSCD 68
           G+VRS D
Sbjct: 61 PGAVRSLD 68

BLAST of CsGy7G003930 vs. NCBI nr
Match: KAG6572339.1 (hypothetical protein SDJN03_29067, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 122 bits (306), Expect = 2.60e-34
Identity = 62/68 (91.18%), Postives = 65/68 (95.59%), Query Frame = 0

Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGDNSADLRPLSSLVGSEG 60
          MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSG+N ADLRPLSSLVGSEG
Sbjct: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENPADLRPLSSLVGSEG 60

Query: 61 SGSVRSCD 68
           G+VR+ D
Sbjct: 61 PGAVRNLD 68

BLAST of CsGy7G003930 vs. NCBI nr
Match: KAG6589197.1 (hypothetical protein SDJN03_17762, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022897.1 hypothetical protein SDJN02_16633, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 115 bits (289), Expect = 1.02e-31
Identity = 59/68 (86.76%), Postives = 63/68 (92.65%), Query Frame = 0

Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGDNSADLRPLSSLVGSEG 60
          MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKS RQGR+LLSSG+N ADLRPLSSLVGSEG
Sbjct: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSFRQGRKLLSSGENPADLRPLSSLVGSEG 60

Query: 61 SGSVRSCD 68
            +V+S D
Sbjct: 61 PEAVQSFD 68

BLAST of CsGy7G003930 vs. ExPASy TrEMBL
Match: A0A5A7SLJ2 (Wound-responsive family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003700 PE=4 SV=1)

HSP 1 Score: 134 bits (336), Expect = 3.35e-39
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 0

Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGDNSADLRPLSSLVGSEG 60
          MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSG+NSADLRPLSSLVGSEG
Sbjct: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG 60

Query: 61 SGSVRSCDV 69
          SGSVRSCDV
Sbjct: 61 SGSVRSCDV 69

BLAST of CsGy7G003930 vs. ExPASy TrEMBL
Match: A0A0A0K6Z3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046690 PE=4 SV=1)

HSP 1 Score: 134 bits (336), Expect = 3.35e-39
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 0

Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGDNSADLRPLSSLVGSEG 60
          MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSG+NSADLRPLSSLVGSEG
Sbjct: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGENSADLRPLSSLVGSEG 60

Query: 61 SGSVRSCDV 69
          SGSVRSCDV
Sbjct: 61 SGSVRSCDV 69

BLAST of CsGy7G003930 vs. ExPASy TrEMBL
Match: A0A2N9HZV9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45844 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 5.86e-17
Identity = 38/68 (55.88%), Postives = 53/68 (77.94%), Query Frame = 0

Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGDNSADLRPLSSLVGSEG 60
          MSYLNRV MAA VAV QG T+ GHKWKSG+KS++  ++ L SG++++DLRPLS ++GS+ 
Sbjct: 1  MSYLNRVWMAAGVAVVQGKTDQGHKWKSGIKSVQLRKQKLFSGNDTSDLRPLSGMIGSDF 60

Query: 61 SGSVRSCD 68
           G + + D
Sbjct: 61 QGFLGNSD 68

BLAST of CsGy7G003930 vs. ExPASy TrEMBL
Match: A0A5N6RB28 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_014541 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 8.32e-17
Identity = 40/68 (58.82%), Postives = 51/68 (75.00%), Query Frame = 0

Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGDNSADLRPLSSLVGSEG 60
          MSYLNR+ MAASVAV QGHT+ G K K GLKSL+ G+R   SG +SADLRP+S ++G + 
Sbjct: 1  MSYLNRIWMAASVAVVQGHTDQGRKVKPGLKSLQLGKRKFFSGSDSADLRPISGMIGLDF 60

Query: 61 SGSVRSCD 68
          +G + S D
Sbjct: 61 AGFLGSSD 68

BLAST of CsGy7G003930 vs. ExPASy TrEMBL
Match: A0A445HSV4 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_034960 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 4.91e-16
Identity = 43/70 (61.43%), Postives = 52/70 (74.29%), Query Frame = 0

Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGDNSADLRPLSSLVGSEG 60
          MSYLNRV MAA+VAVAQGHT+ GHK K+ L S+   R  L SG + +DLRPLS +VGS+ 
Sbjct: 1  MSYLNRVWMAATVAVAQGHTDPGHKCKTALTSIHHNRSRLFSGGSLSDLRPLSGVVGSDV 60

Query: 61 SGSVR-SCDV 69
          +GSV  S DV
Sbjct: 61 AGSVAGSSDV 70

BLAST of CsGy7G003930 vs. TAIR 10
Match: AT4G28240.1 (Wound-responsive family protein )

HSP 1 Score: 45.8 bits (107), Expect = 1.7e-05
Identity = 28/54 (51.85%), Postives = 35/54 (64.81%), Query Frame = 0

Query: 1  MSYLNRVGMAASVAVAQGHTEIGHKWKSGLKSLRQGRRLLSSGDNSADLRPLSS 55
          MSYLN+V MAAS    QG+ + G K KSGL S  + +R LSS     DLRPL++
Sbjct: 1  MSYLNKVWMAASFVAVQGNADHGVKLKSGLTSAHRLQRRLSS-----DLRPLAA 49

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAA0031600.16.91e-3998.55wound-responsive family protein [Cucumis melo var. makuwa] >TYK07052.1 wound-res... [more]
KAE8645762.13.41e-3898.55hypothetical protein Csa_020269 [Cucumis sativus][more]
KAG7011951.19.07e-3592.65hypothetical protein SDJN02_26859, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6572339.12.60e-3491.18hypothetical protein SDJN03_29067, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6589197.11.02e-3186.76hypothetical protein SDJN03_17762, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A5A7SLJ23.35e-3998.55Wound-responsive family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A0A0K6Z33.35e-3998.55Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046690 PE=4 SV=1[more]
A0A2N9HZV95.86e-1755.88Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45844 PE=4 SV=1[more]
A0A5N6RB288.32e-1758.82Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_014541 PE=4 SV=1[more]
A0A445HSV44.91e-1661.43Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_034960 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G28240.11.7e-0551.85Wound-responsive family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..65
NoneNo IPR availablePANTHERPTHR33090:SF38DUF3774 DOMAIN PROTEINcoord: 1..65
IPR022251Protein of unknown function wound-inducedPANTHERPTHR33090DUF3774 DOMAIN PROTEIN-RELATEDcoord: 1..65

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy7G003930.1CsGy7G003930.1mRNA