CsGy6G033877 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy6G033877
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr6: 30341395 .. 30341553 (+)
RNA-Seq Expression	CsGy6G033877
Synteny	CsGy6G033877

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCTTCCAGAACCCACTACATCACCGCCGCCGCCTACTCTCCCAGGGCTTCTGCCCGCCCCTTTCCCAAGCGAGGTCAGGTCAAATTGGGGATTATGGTGGGTCTTGCCCACACCGTTGCTTCAATTTTCTCACCCACCACTCGTCGGACTTAG

mRNA sequence

ATGGCCGCTTCCAGAACCCACTACATCACCGCCGCCGCCTACTCTCCCAGGGCTTCTGCCCGCCCCTTTCCCAAGCGAGGTCAGGTCAAATTGGGGATTATGGTGGGTCTTGCCCACACCGTTGCTTCAATTTTCTCACCCACCACTCGTCGGACTTAG

Coding sequence (CDS)

ATGGCCGCTTCCAGAACCCACTACATCACCGCCGCCGCCTACTCTCCCAGGGCTTCTGCCCGCCCCTTTCCCAAGCGAGGTCAGGTCAAATTGGGGATTATGGTGGGTCTTGCCCACACCGTTGCTTCAATTTTCTCACCCACCACTCGTCGGACTTAG

Protein sequence

MAASRTHYITAAAYSPRASARPFPKRGQVKLGIMVGLAHTVASIFSPTTRRT*

Homology

[Close]

BLAST of CsGy6G033877 vs. NCBI nr
Match: KGN49191.1 (hypothetical protein Csa_004352 [Cucumis sativus])

HSP 1 Score: 103 bits (258), Expect = 7.29e-28
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0


Query: 1  MAASRTHYITAAAYSPRASARPFPKRGQVKLGIMVGLAHTVASIFSPTTRRT 52
          MAASRTHYITAAAYSPRASARPFPKRGQVKLGIMVGLAHTVASIFSPTTRRT
Sbjct: 1  MAASRTHYITAAAYSPRASARPFPKRGQVKLGIMVGLAHTVASIFSPTTRRT 52

[Close]

BLAST of CsGy6G033877 vs. NCBI nr
Match: KAA0052718.1 (hypothetical protein E6C27_scaffold120G003310 [Cucumis melo var. makuwa])

HSP 1 Score: 91.7 bits (226), Expect = 1.19e-22
Identity = 46/52 (88.46%), Postives = 47/52 (90.38%), Query Frame = 0


Query: 1  MAASRTHYITAAAYSPRASARPFPKRGQVKLGIMVGLAHTVASIFSPTTRRT 52
          MA  R+ YIT AAYSPRASARP PKRGQVKLGIMVGLAHTVASIFSPTTRRT
Sbjct: 30 MAGHRSDYITGAAYSPRASARPIPKRGQVKLGIMVGLAHTVASIFSPTTRRT 81

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BLAST of CsGy6G033877 vs. NCBI nr
Match: XP_022977341.1 (uncharacterized protein LOC111477692 [Cucurbita maxima])

HSP 1 Score: 76.6 bits (187), Expect = 5.37e-16
Identity = 38/50 (76.00%), Postives = 42/50 (84.00%), Query Frame = 0


Query: 1   MAASRTHYITAAAYSPRASARPFPKRGQVKLGIMVGLAHTVASIFSPTTR 50
           M  SR+  I+ A YSPR+S RP PKRGQVKLGIMVGLAH+VASIFSPTTR
Sbjct: 56  MGGSRSDDISGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPTTR 105

[Close]

BLAST of CsGy6G033877 vs. NCBI nr
Match: KAG2689810.1 (hypothetical protein I3760_09G156900 [Carya illinoinensis] >KAG6696674.1 hypothetical protein I3842_09G159900 [Carya illinoinensis])

HSP 1 Score: 61.6 bits (148), Expect = 4.42e-11
Identity = 31/49 (63.27%), Postives = 37/49 (75.51%), Query Frame = 0


Query: 2  AASRTHYITAAAYSPRASARPFPKRGQVKLGIMVGLAHTVASIFSPTTR 50
          A +R+  I   ++S R S RP PKRGQVKLGI+VGLAH+VASIFSP  R
Sbjct: 3  AGARSGMINGGSFSGRFSGRPIPKRGQVKLGIVVGLAHSVASIFSPRRR 51

[Close]

BLAST of CsGy6G033877 vs. NCBI nr
Match: KAG6642713.1 (hypothetical protein CIPAW_09G159600 [Carya illinoinensis] >KAG6696673.1 hypothetical protein I3842_09G159800 [Carya illinoinensis])

HSP 1 Score: 59.3 bits (142), Expect = 3.64e-10
Identity = 30/49 (61.22%), Postives = 36/49 (73.47%), Query Frame = 0


Query: 2  AASRTHYITAAAYSPRASARPFPKRGQVKLGIMVGLAHTVASIFSPTTR 50
          A +R+  I   ++S   S RP PKRGQVKLGI+VGLAH+VASIFSP  R
Sbjct: 3  AGARSGMINGGSFSGSFSGRPIPKRGQVKLGIVVGLAHSVASIFSPRRR 51

[Close]

BLAST of CsGy6G033877 vs. ExPASy TrEMBL
Match: A0A0A0KN78 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516990 PE=4 SV=1)

HSP 1 Score: 103 bits (258), Expect = 3.53e-28
Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = 0


Query: 1  MAASRTHYITAAAYSPRASARPFPKRGQVKLGIMVGLAHTVASIFSPTTRRT 52
          MAASRTHYITAAAYSPRASARPFPKRGQVKLGIMVGLAHTVASIFSPTTRRT
Sbjct: 1  MAASRTHYITAAAYSPRASARPFPKRGQVKLGIMVGLAHTVASIFSPTTRRT 52

[Close]

BLAST of CsGy6G033877 vs. ExPASy TrEMBL
Match: A0A5A7UBX7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G003310 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 5.78e-23
Identity = 46/52 (88.46%), Postives = 47/52 (90.38%), Query Frame = 0


Query: 1  MAASRTHYITAAAYSPRASARPFPKRGQVKLGIMVGLAHTVASIFSPTTRRT 52
          MA  R+ YIT AAYSPRASARP PKRGQVKLGIMVGLAHTVASIFSPTTRRT
Sbjct: 30 MAGHRSDYITGAAYSPRASARPIPKRGQVKLGIMVGLAHTVASIFSPTTRRT 81

[Close]

BLAST of CsGy6G033877 vs. ExPASy TrEMBL
Match: A0A6J1IJM3 (uncharacterized protein LOC111477692 OS=Cucurbita maxima OX=3661 GN=LOC111477692 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.60e-16
Identity = 38/50 (76.00%), Postives = 42/50 (84.00%), Query Frame = 0


Query: 1   MAASRTHYITAAAYSPRASARPFPKRGQVKLGIMVGLAHTVASIFSPTTR 50
           M  SR+  I+ A YSPR+S RP PKRGQVKLGIMVGLAH+VASIFSPTTR
Sbjct: 56  MGGSRSDDISGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFSPTTR 105

[Close]

BLAST of CsGy6G033877 vs. ExPASy TrEMBL
Match: A0A5J5VQ30 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A05G172400v1 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.07e-10
Identity = 27/51 (52.94%), Postives = 37/51 (72.55%), Query Frame = 0


Query: 1  MAASRTHYITAAAYSPRASARPFPKRGQVKLGIMVGLAHTVASIFSPTTRR 51
          MA +R   I    YSPR + RP P+RGQVK+ I++G+AH+ ASIFS ++RR
Sbjct: 1  MAGARGEMINGGNYSPRIAGRPIPRRGQVKIAILMGIAHSFASIFSASSRR 51

[Close]

BLAST of CsGy6G033877 vs. ExPASy TrEMBL
Match: A0A5D2UXY7 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D05G178200v1 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.07e-10
Identity = 27/51 (52.94%), Postives = 37/51 (72.55%), Query Frame = 0


Query: 1  MAASRTHYITAAAYSPRASARPFPKRGQVKLGIMVGLAHTVASIFSPTTRR 51
          MA +R   I    YSPR + RP P+RGQVK+ I++G+AH+ ASIFS ++RR
Sbjct: 1  MAGARGEMINGGNYSPRIAGRPIPRRGQVKIAILMGIAHSFASIFSASSRR 51

The following BLAST results are available for this feature:

BLAST of CsGy6G033877 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy6G033877 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN49191.1	7.29e-28	100.00	hypothetical protein Csa_004352 [Cucumis sativus]	[more]
KAA0052718.1	1.19e-22	88.46	hypothetical protein E6C27_scaffold120G003310 [Cucumis melo var. makuwa]	[more]
XP_022977341.1	5.37e-16	76.00	uncharacterized protein LOC111477692 [Cucurbita maxima]	[more]
KAG2689810.1	4.42e-11	63.27	hypothetical protein I3760_09G156900 [Carya illinoinensis] >KAG6696674.1 hypothe...	[more]
KAG6642713.1	3.64e-10	61.22	hypothetical protein CIPAW_09G159600 [Carya illinoinensis] >KAG6696673.1 hypothe...	[more]

BLAST of CsGy6G033877 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KN78	3.53e-28	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516990 PE=4 SV=1	[more]
A0A5A7UBX7	5.78e-23	88.46	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J1IJM3	2.60e-16	76.00	uncharacterized protein LOC111477692 OS=Cucurbita maxima OX=3661 GN=LOC111477692...	[more]
A0A5J5VQ30	2.07e-10	52.94	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A05G172400v1 PE...	[more]
A0A5D2UXY7	2.07e-10	52.94	Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D05G178200v1 P...	[more]

BLAST of CsGy6G033877 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36615	PROTEIN, PUTATIVE-RELATED	coord: 1..51

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G033877.1	CsGy6G033877.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane