CsGy6G004830 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy6G004830
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionProlamin_like domain-containing protein
LocationGy14Chr6: 4440336 .. 4440530 (+)
RNA-Seq ExpressionCsGy6G004830
SyntenyCsGy6G004830
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAATAAAGGCGAGCTATTCGACTGGAGCGCTATTAGTGATGACGGTGCTCTCATTACTTGTAGTAGACTCGTTGGCCTTAGTTCAACCTTCTACAGTAGACGACGATGGCATATCACCAATATGGAGTGATTGGGTAGATGAAAATAGAGAGCTGTACTCTAGCACCGTGTTTATCCATGATGAGGAGTGA

mRNA sequence

ATGAGAATAAAGGCGAGCTATTCGACTGGAGCGCTATTAGTGATGACGGTGCTCTCATTACTTGTAGTAGACTCGTTGGCCTTAGTTCAACCTTCTACAGTAGACGACGATGGCATATCACCAATATGGAGTGATTGGGTAGATGAAAATAGAGAGCTGTACTCTAGCACCGTGTTTATCCATGATGAGGAGTGA

Coding sequence (CDS)

ATGAGAATAAAGGCGAGCTATTCGACTGGAGCGCTATTAGTGATGACGGTGCTCTCATTACTTGTAGTAGACTCGTTGGCCTTAGTTCAACCTTCTACAGTAGACGACGATGGCATATCACCAATATGGAGTGATTGGGTAGATGAAAATAGAGAGCTGTACTCTAGCACCGTGTTTATCCATGATGAGGAGTGA

Protein sequence

MRIKASYSTGALLVMTVLSLLVVDSLALVQPSTVDDDGISPIWSDWVDENRELYSSTVFIHDEE*
Homology
[Close]
BLAST of CsGy6G004830 vs. NCBI nr
Match: KGN46140.1 (hypothetical protein Csa_004809 [Cucumis sativus])

HSP 1 Score: 125 bits (313), Expect = 6.60e-36
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MRIKASYSTGALLVMTVLSLLVVDSLALVQPSTVDDDGISPIWSDWVDENRELYSSTVFI 60
          MRIKASYSTGALLVMTVLSLLVVDSLALVQPSTVDDDGISPIWSDWVDENRELYSSTVFI
Sbjct: 1  MRIKASYSTGALLVMTVLSLLVVDSLALVQPSTVDDDGISPIWSDWVDENRELYSSTVFI 60

Query: 61 HDEE 64
          HDEE
Sbjct: 61 HDEE 64

[Close]
BLAST of CsGy6G004830 vs. NCBI nr
Match: KGN50979.1 (hypothetical protein Csa_008880 [Cucumis sativus])

HSP 1 Score: 68.9 bits (167), Expect = 6.92e-13
Identity = 35/44 (79.55%), Postives = 40/44 (90.91%), Query Frame = 0 

Query: 8  STGALLVMTVLSLLVVDSLALVQPSTVDDDGISPIWSDWVDENR 51
          ST  LLV+ +LSLLVVDSLALVQPSTVDD+GIS IWSDW+DE+R
Sbjct: 4  STRVLLVVVMLSLLVVDSLALVQPSTVDDNGISSIWSDWLDEDR 47

[Close]
BLAST of CsGy6G004830 vs. NCBI nr
Match: KAE8650019.1 (hypothetical protein Csa_009940 [Cucumis sativus])

HSP 1 Score: 67.4 bits (163), Expect = 4.55e-12
Identity = 33/48 (68.75%), Postives = 41/48 (85.42%), Query Frame = 0 

Query: 4  KASYSTGALLVMTVLSLLVVDSLALVQPSTVDDDGISPIWSDWVDENR 51
          K S STGALL++ +LSLLVVDSLALV PS +DD+GIS IWS W+D++R
Sbjct: 3  KTSNSTGALLLVVMLSLLVVDSLALVHPSIIDDNGISSIWSGWIDKDR 50

[Close]
BLAST of CsGy6G004830 vs. ExPASy TrEMBL
Match: A0A0A0K8R6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G056570 PE=4 SV=1)

HSP 1 Score: 125 bits (313), Expect = 3.20e-36
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MRIKASYSTGALLVMTVLSLLVVDSLALVQPSTVDDDGISPIWSDWVDENRELYSSTVFI 60
          MRIKASYSTGALLVMTVLSLLVVDSLALVQPSTVDDDGISPIWSDWVDENRELYSSTVFI
Sbjct: 1  MRIKASYSTGALLVMTVLSLLVVDSLALVQPSTVDDDGISPIWSDWVDENRELYSSTVFI 60

Query: 61 HDEE 64
          HDEE
Sbjct: 61 HDEE 64

[Close]
BLAST of CsGy6G004830 vs. ExPASy TrEMBL
Match: A0A0A0KQ41 (Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G381840 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 3.35e-13
Identity = 35/44 (79.55%), Postives = 40/44 (90.91%), Query Frame = 0 

Query: 8  STGALLVMTVLSLLVVDSLALVQPSTVDDDGISPIWSDWVDENR 51
          ST  LLV+ +LSLLVVDSLALVQPSTVDD+GIS IWSDW+DE+R
Sbjct: 4  STRVLLVVVMLSLLVVDSLALVQPSTVDDNGISSIWSDWLDEDR 47

[Close]
BLAST of CsGy6G004830 vs. ExPASy TrEMBL
Match: A0A0A0L535 (Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G008300 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.44e-12
Identity = 33/48 (68.75%), Postives = 41/48 (85.42%), Query Frame = 0 

Query: 4  KASYSTGALLVMTVLSLLVVDSLALVQPSTVDDDGISPIWSDWVDENR 51
          K S STGALL++ +LSLLVVDSLALV PS +DD+GIS IWS W+D++R
Sbjct: 3  KTSNSTGALLLVVMLSLLVVDSLALVHPSIIDDNGISSIWSGWIDKDR 50

The following BLAST results are available for this feature:
BLAST of CsGy6G004830 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy6G004830 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN46140.16.60e-36100.00hypothetical protein Csa_004809 [Cucumis sativus][more]
KGN50979.16.92e-1379.55hypothetical protein Csa_008880 [Cucumis sativus][more]
KAE8650019.14.55e-1268.75hypothetical protein Csa_009940 [Cucumis sativus][more]
BLAST of CsGy6G004830 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8R63.20e-36100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G056570 PE=4 SV=1[more]
A0A0A0KQ413.35e-1379.55Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G3818... [more]
A0A0A0L5351.44e-1268.75Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G0083... [more]
BLAST of CsGy6G004830 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G004830.1CsGy6G004830.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0110165 cellular anatomical entity