CsGy5G014923 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G014923
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Unknown protein
Location	Gy14Chr5: 20636087 .. 20636383 (-)
RNA-Seq Expression	CsGy5G014923
Synteny	CsGy5G014923

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAGCCGCCGCCCCACCCCGAGTTTTATTTGCTGAACAATCCTCCGTCGACCTAGCCGACCTCACGTACGACCTGCTCCATCTTCCTTCTCCTTTTCCCGCCAATTCGTCGTCGTTCATTCTTTCAGCCGCCAGTCGCCGCCACCTCAAAACTTTTACTCTAAGTCGCCGTCCACATCCGCCTCCGGTAACATTTAGTCTCCAAAATTGTATTCATTTTGAGTTAAATTGGTTCCAGTTTTATGTTTTGATGAATATTGTCTTGGGAATGCTTTCAGATACTAGTGTTTTTTGA

mRNA sequence

ATGATAGCCGCCGCCCCACCCCGAGTTTTATTTGCTGAACAATCCTCCGTCGACCTAGCCGACCTCACGTACGACCTGCTCCATCTTCCTTCTCCTTTTCCCGCCAATTCGTCGTCGTTCATTCTTTCAGCCGCCAGTCGCCGCCACCTCAAAACTTTTACTCTAAGTCGCCGTCCACATCCGCCTCCGGTAACATTTAGTCTCCAAAATTGTATTCATTTTGAGTTAAATTGGTTCCAGTTTTATGTTTTGATGAATATTGTCTTGGGAATGCTTTCAGATACTAGTGTTTTTTGA

Coding sequence (CDS)

ATGATAGCCGCCGCCCCACCCCGAGTTTTATTTGCTGAACAATCCTCCGTCGACCTAGCCGACCTCACGTACGACCTGCTCCATCTTCCTTCTCCTTTTCCCGCCAATTCGTCGTCGTTCATTCTTTCAGCCGCCAGTCGCCGCCACCTCAAAACTTTTACTCTAAGTCGCCGTCCACATCCGCCTCCGGTAACATTTAGTCTCCAAAATTGTATTCATTTTGAGTTAAATTGGTTCCAGTTTTATGTTTTGATGAATATTGTCTTGGGAATGCTTTCAGATACTAGTGTTTTTTGA

Protein sequence

MIAAAPPRVLFAEQSSVDLADLTYDLLHLPSPFPANSSSFILSAASRRHLKTFTLSRRPHPPPVTFSLQNCIHFELNWFQFYVLMNIVLGMLSDTSVF*

Homology

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BLAST of CsGy5G014923 vs. NCBI nr
Match: KAE8648433.1 (hypothetical protein Csa_009085, partial [Cucumis sativus])

HSP 1 Score: 128 bits (321), Expect = 1.56e-36
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0


Query: 1  MIAAAPPRVLFAEQSSVDLADLTYDLLHLPSPFPANSSSFILSAASRRHLKTFTLSRRPH 60
          MIAAAPPRVLFAEQSSVDLADLTYDLLHLPSPFPANSSSFILSAASRRHLKTFTLSRRPH
Sbjct: 1  MIAAAPPRVLFAEQSSVDLADLTYDLLHLPSPFPANSSSFILSAASRRHLKTFTLSRRPH 60

Query: 61 PPP 63
          PPP
Sbjct: 61 PPP 63

The following BLAST results are available for this feature:

BLAST of CsGy5G014923 vs.


Match Name	E-value	Identity	Description

BLAST of CsGy5G014923 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8648433.1	1.56e-36	100.00	hypothetical protein Csa_009085, partial [Cucumis sativus]	[more]

BLAST of CsGy5G014923 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsGy5G014923 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G014923.1	CsGy5G014923.1	mRNA