CsGy5G002110 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy5G002110
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Ubiquitin-conjugating enzyme E2
Location	Gy14Chr5: 1319986 .. 1326237 (-)
RNA-Seq Expression	CsGy5G002110
Synteny	CsGy5G002110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCTCAGGCAAAACAACAAACACGCAGGAGGATCTCAAGGTGAGCTCTCTTTCTTTCTCAATTCCTTCTCTTCTCTTCTCTTCTCTTCATTTCTTCTTGCTTGTTTTATCTTCTCTACTTATTCATTCATTCATTCATTCATCCATTCTTTTCTGATTCTCAACTCCAAACGATCTTCAGAGCTTCCACTCTTTTGGATTTTGGTTATGGCTTCGAAACGGATCTTGAAAGAGCTCAAGGATCTCCAGAAAGATCCTCCTACGTCTTGCAGTGCAGGTTTCTTCTCCTTCTCCTTCTCCTTCTCCTCCTTGATTTCCACTGCTCTATTACAACAATTCATTATCTATTTATTCCATTTATGTTTTCTCCAATACTGGAACCATTTCTCTTCCCTCTTTATGATCTTCCTCCTTCTACTTCTCCCTTTTCTGTTTATTTGTAGCGTGAGTCACTGTGGATAGATCGCTTTATTTCACGTCTTAATGGACTGTTCTGATCTTTAATTTCTCCTTAAACTCTGCTGTATTTGCTATTGGATCATGGTAACACGCGAGTTAGTATTAGCATATGGTCCTTGTGCATGTTTGTTATTGTGTTGAGGGATAAATCTTGGCGTCGTATTTGGATGAAATATGAATACTACTATTGTTCAGCTTGTTACTAGTTTCCGTGTATATTCTTGTAGGTTTAGAATTATATCTCTTTTCTCTTCCTAATTATTGATTTTAAGAATAATACTACACGGAGAGAAGAAATCATGAGTGAGACAGGAATATTTTTGTATTTCATTGCCAAATATAATCGCATCAGGTTCCAAGAGTATTTATACACAAGATAACTCTCCAGCTGATATGATATGACTAATGTATATTCTCTCTCTAACTGATACGGACACAGTGGAATATTAAGAGCTAGTGTTTTAAGTTAATTTTTCATTAATTATTTAATTAATGCGAATATATTTGAAATCTATCAGACTGACACTTGATCAGCTAACTTAATAAGTGATGAACAAAACACATCATTGACTTTGTTTGTTAATGCTTATGTTAAATAATAGATAACAAAATGAACGTTGGGACTAGAATACCTTTTTTTATATCTAAAGTAAAAAGACTAACAGATAGTGTGAAATATGCATGAAAGTTCAAGACATTGAGATGTTCAGAATGGGAATGGAAAGAAACCGCCCATGGAAATACACGAGATAATCAGAGTTTTATGTTATCAGATGTTTATTGAGCCTTCATTTTGGCTATATAACTCTTGAGTTGTGATATATCCGCAATCAGAGTATTTCAGTAGTGAATTTTTTTATTAAGGATTCTGCATCTAACTTTTTTGTATCATAATTTTCAATTTAATTTGAATTCTTCCTGTGTGAATTGAAAAATTGGGTGTCAAGCTTTCAATCAGCCTCCAAAATTTCTTAATGGGGAATAAGAACCAACTTTGTTCTTACTGATGTATTTATAGCTTAATTCTGTACACCATATCTTCTGAATTGATGGTAAATTTTGTGCTTCATCTTCTTTCCTTGATGAATTTATGTTTGGGAAAGTTTTGCCTCACTTTGACTAGTACTTCAGTTGGTATAACTTACTTATCACTAATGGTTATAGAATTGTTACGTTCACTTGATTTAATAGTCTGTTGAATCAAAATCTTTAGGCCCAGTAGCTGAAGACATGTTCCATTGGCAAGCAACAATTATGGGCCCTCCTGACAGTCCTTATGCAGGAGGAGTGTTTCTTGTCAACATTCATTTCCCTCCAGATTATCCGTTTAAACCACCCAAGGTACTTAGAATTGATATGCTCCATTTACAGACATCTTTTGCCTACACATCTGCATACCTGCGTTTTTTATTTTTTTTTTGACAAGGAAACAGACATTTAATTGTGAAACTTGGGAGTTACAGTTAACAAACTCTTTATGAAGAGTATAAACATCTCATATCCTACTGAAAATTACAAGAAAACCCAAAAACTTGACATCAAATTCTGTTGAGAGAAATGTATTTAAACTTTTTTTGTTTGATCGTTTAGAAATAAAAGCCAACCGTTTACAGTTGTTTCAGAGAGTTTTCTAATAGTGCCATTTTGAAAAGAAACTTTGGGTTCACCGTGTCTTCAGAATCAAGAAGAAAGAAAAAGAGAGTGTGCCACTAAATTAGCCTGATAAGTCGGCAAACATGTAAAACTATTTAACAATTTTGCCTTAGTTAACAATTTTGCCTTGATATCAAAGACTAATTTTTGTAAGCAATCAGGTTTCACTTATATATATACACGGTAAATGTTTTGAGACATCGGCCAAATTCGTAGTATTGGTTGTGATGAGTCCCCTCCACCTCCCACCCACCCGCACTCCCAAGTGGGGGTCGGCAAGAAGTTTTGAGAATTACTAAAAAGTAAAAAAAAAAAAGAACTGTGCAGAATGAAATTATATTATGGTTAGAAGCTATTGTTTAACGTATGGTTAGAAGCTATTGTTTAACGTAGAGACATTTACTAAACGGATATGAATGGGTTAAAATTAATATTGCATAAAATAATTTTATTTGCAGCTGTTTGTTGCCTCCCAAGTGTTTGGGTTCTCGTTAATGGCACTCCTATAGTAAAATTTGGTAGTTTTGGACCATAGACATATCTACGCCCATTCCCTGTCTTAGTGACTAATATGCTTGGGATGCGAGATTGACAAGGAGTTCAAAATTTTCTTGCTTGAAGTAGTTCCAAGTATGAGAAGGTAGAGAGATCAAGTTTGCACAGTCTGTTTTAAGATGACATTGTTGCTTTTGCTTCAGAAACGATAGAAATCTGGAAAATTTATCATGATATTTTTAAGGTGGCTTCTGACTTAAGTGTAACATGGAATCTTCCACCGTTGAATTCGTTGGCTGAGACTTGGCCTCTGAATCCTCGGCTTTCCCCTTGGAATTAATCCCAGCACATGGGCTAATTGCAGCCAAGTACTGAAATGATCCAAGTAATTAGTGGACGATAACAAGGTCTGGTGACCTAACAAAACGGTGAAGTGCTGTTGGGGATAACTCTTGAATTGCATTTCTTTTGGCATCAGCTAAGCTAGTTGCGTGCGAATTTGATAATGATCATTTGCAGTGATTCCATCGCTCTAAATACCTAAAAAGTGGCCATTGTAATCTTTCTCAAAAGGATTACTTTTGTATGTTGAAGTTGAAGAAATAAGCTATCCAATGTCTGACCGAAGTTCCAAGAAGATCATAGAGTAAAGTAAGCTGGAGAGTTCAGGGTTATTTTGTTTTCTGTAAATTAGACATGAACCAGAGACAAGCCGCTTGTCTCCCCTTATAATTATCGCCTCCTTTGAAGGCAAAGCATGGCAATTCAAGATCACCTTTTGAGTCTCTGCACCTTTGCCTCTTGATTTTTAAGTGAACAGTTTTGGGTTTTGGGCATCTATTGCGGGGGGAGGGGACTCTCCAGAACGCCCAGGGACTTCCATGTGCAGCCGATTTAGAGGTTTTGCCACCCTTTATTTATTTTTTAAAATAAAAAGTTCCCAAATCTGGATGGAGAGGAATCCTTGCTTGAAGGACAGAAGTAGACATGAACCGGAGAAGTAAACTCTTGTCTCCCCTATAAAGTTGTTTTAGGGGGTTCTATGGCTAAGCTTATAGCTATTATTTGCAAAGCTAGATGGAGACAGTGCTTGCAGGACAAAGTAGACATTTTGAACCCATTGGGAGTTATTAGATTTTGGGTTACCTACTCAAATTCTCTTGTAATTCTAACCTTCGGTTACTGATAAGATAACTGAGATTCCTTAAACGCTTTGGCTTTGGATTTGATTGGTACCTGTCTTCCTAACTAATACTAATACCCTTTTTAATCATTCTTCTTAAATGAATCTGTTTAATTATCAAACTCAATGTAAGACCATCGATTCATCTACGGTGTTTTAAGTAAGCATCTCCTATTTTCCTTCTCTTTTTCCATAAATGAATAATTCGATTTCCCCATTCAAACATCAGACAGCCTGCTCATTCTATTAGGCTGATGAAGAATTGTTAAATTGTAAACGAGTATTATGACCAAAAACTGACTCAAAGTCCATCCACCCAGTCGTTTTGGGTAGGTCTCAGATGAGATAACCTTCTCGGTGGAGTCATACGTACCTTGATTCAATGACTAAGATAATTCATGTTAAGTTTTCAATTTCTAACCCATTGAGATTTTGACGTGAAGGTTCAATTTTTTACGTATGTCTTTCCAATTGATAGTGATCTTGGTCATGTTAATTACATATCTTACTTACTCATACTATTTTGTGTTGTGTATGTTATGCCAGGTTACATGTTGCTGATTTGAGAACTTGCTAATACACTTAAGTTTATCTAGTAAAATTATTCACTCAATTTCTCTTAATACATAATTGGCATCTAAAGTTGAATTCATTAACTCATACAGGTTGCATTCAGAACAAAGGTCTTTCATCCCAATATCAACAGCAATGGTAGCATATGCCTCGACATACTTAAGGAGCAGTGGAGTCCTGCACTAACCATTTCCAAGGTTGTCACTCTTTGCATAAACCAGTTTTTAAGAGGCGGGAAATATCTGCTGCTATTTGATTCCTATTTTGATATCTTAATTAAGATATTGTGTTTTTTTTTTTACTTTTTACTCATCTAGGGAAGAGTGTCTAGACTGCTTAACAAAACTTTTAAAATAATTTTCCTCGATAAACTAAAGGGGGCTGGTGCATGAAATCCTTGGATGGTACAGGGAATAAATTATAGAGAAAAAAATATCAAGTGGATGCTATGGATGAATGGCCCAAGCATGTCAATTAATTATCATTTTCATGTTGGTGCCTACAGGGAATATGAAATCTAATTACCTCTTTACTTCATGCATTATGGCCTTCCATTAGACTATTACTAGTTTTGTTCATAGTGGTTTCGCTTTGTTCTGTAAACTTAAAGACTTGTTTTCTTCATCCATTCAATCCAACACATTGATTATACATATACTTGGTAACATGTGTTTGTACTCCAGGTGTTACTTTCGATCTGCTCGCTGCTAACGGACCCAAATCCTGATGATCCTTTGGTGCCAGAGATTGCACACATGTACAAGACTGACAGAAGCAAGTACGAAGCAACTGCCAGAAGCTGGACCCAGAAATATGCTATGGGTTAGTGTTTGCTGCTTTGCTCTTAGTGTTGTTTAGAGGAGGGGCGGCTTCTTTCCCAAATGGCCTTTTACTTGGAATTATATCTTTGAATCTGCTTCTTCTTTTATCCAATGGGGTTTAGGTATGTTTCCCTCCTGAAAAAGATAAAAACTCTGCCTGTTCTAAAACTTGTTTGTATGGATAAACAAATTTATCTTTAATCGTGAGAGTATTCCAATAAAAACTTGGACCTACCCTTCATGCTAAAATCTATGCTCAATTATGTACTAATGCCTCTCAAGTGAGCCTCTTGGATTTGGAAAGCTTGGCTAAACACACAACCAATGTCTTTCTTATGTTTGTGTCGGAGAAAATTTCTAACACTAAATCAGTATCATACTTCATTTCATTTCTTCACACTATATATTTTTATTTATAAATATTTATGGAGTCAACATTAATGTTCGTAGATCTTGAACTATACATGTATCGGCAGACAATAAATTGTAGCATATATAGAAAATTTTGATTTGTGTGGATGTGTGTTTGGTGATTTAACCGGGGAGAGGTCTGTAAGAGGCTGACTATTTTCTTAATTGATAAAAACGTTAGTGTGAAATTTTTAGGTAGTTTGATCATTTGGATTTTAGTTTTTCTTTTTTCATAGCCTTTTAAACTTCATTTGGTATCAAGTTGAATTTTGTTTGGTTCTTTATTTTTCTGCTATCTGAAATCAACTTTACTCTCATTTTCTAACCTGTAGTTTGTTAATTTATTTCATTTATTTCTTAAATATGTTTATTCAAATTTAGTATCACATGAAGGTCAAAGGTTCGTGGGTTTTTTTAGAAATAAAAAAGTTAGAGACCCATTTTGAAATTTACCGTCTTAAATCCTGTTTTTCCTTTTTCCTTTTTAATTTATTATGAATTCAATGTTCTTTAAGGAATGGGAAAGAAATTGTTAGAAAACAAAAAAATGATTCAAATAGATATCCACAAGCTCAAAGAAAAACTACTCTCATCCATGTGTTCTCTAATAATTTCTAAATTCATTTCAATAATTGAAAAATAAAAGTTTCTACTATG

mRNA sequence

CCTCTCAGGCAAAACAACAAACACGCAGGAGGATCTCAAGAGCTTCCACTCTTTTGGATTTTGGTTATGGCTTCGAAACGGATCTTGAAAGAGCTCAAGGATCTCCAGAAAGATCCTCCTACGTCTTGCAGTGCAGGCCCAGTAGCTGAAGACATGTTCCATTGGCAAGCAACAATTATGGGCCCTCCTGACAGTCCTTATGCAGGAGGAGTGTTTCTTGTCAACATTCATTTCCCTCCAGATTATCCGTTTAAACCACCCAAGGTTGCATTCAGAACAAAGGTCTTTCATCCCAATATCAACAGCAATGGTAGCATATGCCTCGACATACTTAAGGAGCAGTGGAGTCCTGCACTAACCATTTCCAAGGTTGTCACTCTTTGCATAAACCAGTTTTTAAGAGGCGGGAAATATCTGCTGCTATTTGATTCCTATTTTGATATCTTAATTAAGATATTGTGTTTTTTTTTTTACTTTTTACTCATCTAGGGAAGAGTGTCTAGACTGCTTAACAAAACTTTTAAAATAATTTTCCTCGATAAACTAAAGGGGGCTGGTGCATGAAATCCTTGGATGGTACAGGGAATAAATTATAGAGAAAAAAATATCAAGTGGATGCTATGGATGAATGGCCCAAGCATGTCAATTAATTATCATTTTCATGTTGGTGCCTACAGGGAATATGAAATCTAATTACCTCTTTACTTCATGCATTATGGCCTTCCATTAGACTATTACTAGTTTTGTTCATAGTGGTTTCGCTTTGTTCTGTAAACTTAAAGACTTGTTTTCTTCATCCATTCAATCCAACACATTGATTATACATATACTTGGTAACATGTGTTTGTACTCCAGGTGTTACTTTCGATCTGCTCGCTGCTAACGGACCCAAATCCTGATGATCCTTTGGTGCCAGAGATTGCACACATGTACAAGACTGACAGAAGCAAGTACGAAGCAACTGCCAGAAGCTGGACCCAGAAATATGCTATGGGTTAGTGTTTGCTGCTTTGCTCTTAGTGTTGTTTAGAGGAGGGGCGGCTTCTTTCCCAAATGGCCTTTTACTTGGAATTATATCTTTGAATCTGCTTCTTCTTTTATCCAATGGGGTTTAGGTATGTTTCCCTCCTGAAAAAGATAAAAACTCTGCCTGTTCTAAAACTTGTTTGTATGGATAAACAAATTTATCTTTAATCGTGAGAGTATTCCAATAAAAACTTGGACCTACCCTTCATGCTAAAATCTATGCTCAATTATGTACTAATGCCTCTCAAGTGAGCCTCTTGGATTTGGAAAGCTTGGCTAAACACACAACCAATGTCTTTCTTATGTTTGTGTCGGAGAAAATTTCTAACACTAAATCAGTATCATACTTCATTTCATTTCTTCACACTATATATTTTTATTTATAAATATTTATGGAGTCAACATTAATGTTCGTAGATCTTGAACTATACATGTATCGGCAGACAATAAATTGTAGCATATATAGAAAATTTTGATTTGTGTGGATGTGTGTTTGGTGATTTAACCGGGGAGAGGTCTGTAAGAGGCTGACTATTTTCTTAATTGATAAAAACGTTAGTGTGAAATTTTTAGGTAGTTTGATCATTTGGATTTTAGTTTTTCTTTTTTCATAGCCTTTTAAACTTCATTTGGTATCAAGTTGAATTTTGTTTGGTTCTTTATTTTTCTGCTATCTGAAATCAACTTTACTCTCATTTTCTAACCTGTAGTTTGTTAATTTATTTCATTTATTTCTTAAATATGTTTATTCAAATTTAGTATCACATGAAGGTCAAAGGTTCGTGGGTTTTTTTAGAAATAAAAAAGTTAGAGACCCATTTTGAAATTTACCGTCTTAAATCCTGTTTTTCCTTTTTCCTTTTTAATTTATTATGAATTCAATGTTCTTTAAGGAATGGGAAAGAAATTGTTAGAAAACAAAAAAATGATTCAAATAGATATCCACAAGCTCAAAGAAAAACTACTCTCATCCATGTGTTCTCTAATAATTTCTAAATTCATTTCAATAATTGAAAAATAAAAGTTTCTACTATG

Coding sequence (CDS)

ATGGCTTCGAAACGGATCTTGAAAGAGCTCAAGGATCTCCAGAAAGATCCTCCTACGTCTTGCAGTGCAGGCCCAGTAGCTGAAGACATGTTCCATTGGCAAGCAACAATTATGGGCCCTCCTGACAGTCCTTATGCAGGAGGAGTGTTTCTTGTCAACATTCATTTCCCTCCAGATTATCCGTTTAAACCACCCAAGGTTGCATTCAGAACAAAGGTCTTTCATCCCAATATCAACAGCAATGGTAGCATATGCCTCGACATACTTAAGGAGCAGTGGAGTCCTGCACTAACCATTTCCAAGGTTGTCACTCTTTGCATAAACCAGTTTTTAAGAGGCGGGAAATATCTGCTGCTATTTGATTCCTATTTTGATATCTTAATTAAGATATTGTGTTTTTTTTTTTACTTTTTACTCATCTAG

Protein sequence

MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVVTLCINQFLRGGKYLLLFDSYFDILIKILCFFFYFLLI*

Homology

[Close]

BLAST of CsGy5G002110 vs. ExPASy Swiss-Prot
Match: P35135 (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 5.7e-55
Identity = 100/103 (97.09%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPYAGGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVV 104
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV+
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVL 103

[Close]

BLAST of CsGy5G002110 vs. ExPASy Swiss-Prot
Match: P35132 (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana OX=3702 GN=UBC9 PE=1 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 1.7e-54
Identity = 99/103 (96.12%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVV 104
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV+
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVL 103

[Close]

BLAST of CsGy5G002110 vs. ExPASy Swiss-Prot
Match: P35133 (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana OX=3702 GN=UBC10 PE=1 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.2e-54
Identity = 99/103 (96.12%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP +SPYAGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVV 104
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV+
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVL 103

[Close]

BLAST of CsGy5G002110 vs. ExPASy Swiss-Prot
Match: Q94F47 (Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.2e-54
Identity = 98/103 (95.15%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVV 104
           PFKPPKVAFRTKVFHPN+NSNGSICLDILKEQWSPALTISKV+
Sbjct: 61  PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVL 103

[Close]

BLAST of CsGy5G002110 vs. ExPASy Swiss-Prot
Match: P35131 (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana OX=3702 GN=UBC8 PE=1 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 4.9e-54
Identity = 98/103 (95.15%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP +SPY+GGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVV 104
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV+
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVL 103

[Close]

BLAST of CsGy5G002110 vs. NCBI nr
Match: KAA0042700.1 (ubiquitin-conjugating enzyme E2-17 kDa [Cucumis melo var. makuwa] >TYK06104.1 ubiquitin-conjugating enzyme E2-17 kDa [Cucumis melo var. makuwa])

HSP 1 Score: 220 bits (561), Expect = 3.13e-71
Identity = 106/111 (95.50%), Postives = 106/111 (95.50%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVVTLCINQFL 111
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVV L I   L
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVVLLSICSLL 111

[Close]

BLAST of CsGy5G002110 vs. NCBI nr
Match: MBA0685307.1 (hypothetical protein [Gossypium aridum])

HSP 1 Score: 219 bits (557), Expect = 3.78e-71
Identity = 103/110 (93.64%), Postives = 107/110 (97.27%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVVTLCINQF 110
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV+ L I+++
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVIVLEISRY 110

[Close]

BLAST of CsGy5G002110 vs. NCBI nr
Match: KJB39460.1 (hypothetical protein B456_007G014500 [Gossypium raimondii])

HSP 1 Score: 219 bits (557), Expect = 3.54e-70
Identity = 103/110 (93.64%), Postives = 107/110 (97.27%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLV IHFPPDY
Sbjct: 70  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 129

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVVTLCINQF 110
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV+ L I+++
Sbjct: 130 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVIVLEISRY 179

[Close]

BLAST of CsGy5G002110 vs. NCBI nr
Match: XP_021644853.1 (SUMO-conjugating enzyme UBC9-like isoform X2 [Hevea brasiliensis] >XP_021644854.1 SUMO-conjugating enzyme UBC9-like isoform X2 [Hevea brasiliensis])

HSP 1 Score: 216 bits (551), Expect = 4.16e-70
Identity = 101/106 (95.28%), Postives = 103/106 (97.17%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVVTLC 106
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISK++  C
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKMLNCC 106

[Close]

BLAST of CsGy5G002110 vs. NCBI nr
Match: RCW18836.1 (hypothetical protein GLYMA_19G253000v4 [Glycine max])

HSP 1 Score: 217 bits (552), Expect = 4.95e-70
Identity = 102/104 (98.08%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVVT 104
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV+T
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVMT 104

[Close]

BLAST of CsGy5G002110 vs. ExPASy TrEMBL
Match: A0A5A7TH72 (Ubiquitin-conjugating enzyme E2-17 kDa OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G002050 PE=3 SV=1)

HSP 1 Score: 220 bits (561), Expect = 1.52e-71
Identity = 106/111 (95.50%), Postives = 106/111 (95.50%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVVTLCINQFL 111
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVV L I   L
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVVLLSICSLL 111

[Close]

BLAST of CsGy5G002110 vs. ExPASy TrEMBL
Match: A0A7J8XDG8 (UBC core domain-containing protein (Fragment) OS=Gossypium aridum OX=34290 GN=Goari_012974 PE=3 SV=1)

HSP 1 Score: 219 bits (557), Expect = 1.83e-71
Identity = 103/110 (93.64%), Postives = 107/110 (97.27%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVVTLCINQF 110
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV+ L I+++
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVIVLEISRY 110

[Close]

BLAST of CsGy5G002110 vs. ExPASy TrEMBL
Match: A0A0D2T778 (UBC core domain-containing protein OS=Gossypium raimondii OX=29730 GN=B456_007G014500 PE=3 SV=1)

HSP 1 Score: 219 bits (557), Expect = 1.72e-70
Identity = 103/110 (93.64%), Postives = 107/110 (97.27%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLV IHFPPDY
Sbjct: 70  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 129

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVVTLCINQF 110
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV+ L I+++
Sbjct: 130 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVIVLEISRY 179

[Close]

BLAST of CsGy5G002110 vs. ExPASy TrEMBL
Match: A0A368UHD6 (UBC core domain-containing protein OS=Glycine max OX=3847 GN=100305945 PE=3 SV=1)

HSP 1 Score: 217 bits (552), Expect = 2.40e-70
Identity = 102/104 (98.08%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVVT 104
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV+T
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVMT 104

[Close]

BLAST of CsGy5G002110 vs. ExPASy TrEMBL
Match: A0A6J1K529 (ubiquitin-conjugating enzyme E2-17 kDa-like OS=Cucurbita maxima OX=3661 GN=LOC111491260 PE=3 SV=1)

HSP 1 Score: 217 bits (553), Expect = 2.43e-70
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVV 103
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV+
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVL 103

[Close]

BLAST of CsGy5G002110 vs. TAIR 10
Match: AT4G27960.1 (ubiquitin conjugating enzyme 9 )

HSP 1 Score: 213.4 bits (542), Expect = 1.2e-55
Identity = 99/103 (96.12%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVV 104
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV+
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVL 103

[Close]

BLAST of CsGy5G002110 vs. TAIR 10
Match: AT4G27960.2 (ubiquitin conjugating enzyme 9 )

HSP 1 Score: 213.4 bits (542), Expect = 1.2e-55
Identity = 99/103 (96.12%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLV IHFPPDY
Sbjct: 31  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 90

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVV 104
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV+
Sbjct: 91  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVL 133

[Close]

BLAST of CsGy5G002110 vs. TAIR 10
Match: AT1G64230.1 (ubiquitin-conjugating enzyme 28 )

HSP 1 Score: 213.0 bits (541), Expect = 1.5e-55
Identity = 98/103 (95.15%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVV 104
           PFKPPKVAFRTKVFHPN+NSNGSICLDILKEQWSPALTISKV+
Sbjct: 61  PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVL 103

[Close]

BLAST of CsGy5G002110 vs. TAIR 10
Match: AT1G64230.2 (ubiquitin-conjugating enzyme 28 )

HSP 1 Score: 213.0 bits (541), Expect = 1.5e-55
Identity = 98/103 (95.15%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVV 104
           PFKPPKVAFRTKVFHPN+NSNGSICLDILKEQWSPALTISKV+
Sbjct: 61  PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVL 103

[Close]

BLAST of CsGy5G002110 vs. TAIR 10
Match: AT5G53300.1 (ubiquitin-conjugating enzyme 10 )

HSP 1 Score: 213.0 bits (541), Expect = 1.5e-55
Identity = 99/103 (96.12%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP +SPYAGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVV 104
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV+
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVL 103

The following BLAST results are available for this feature:

BLAST of CsGy5G002110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P35135	5.7e-55	97.09	Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
P35132	1.7e-54	96.12	SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana OX=3702 GN=UBC9 PE=1 SV=1	[more]
P35133	2.2e-54	96.12	Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana OX=3702 GN=UBC10 PE=1...	[more]
Q94F47	2.2e-54	95.15	Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1...	[more]
P35131	4.9e-54	95.15	Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana OX=3702 GN=UBC8 PE=1 S...	[more]

BLAST of CsGy5G002110 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0042700.1	3.13e-71	95.50	ubiquitin-conjugating enzyme E2-17 kDa [Cucumis melo var. makuwa] >TYK06104.1 ub...	[more]
MBA0685307.1	3.78e-71	93.64	hypothetical protein [Gossypium aridum]	[more]
KJB39460.1	3.54e-70	93.64	hypothetical protein B456_007G014500 [Gossypium raimondii]	[more]
XP_021644853.1	4.16e-70	95.28	SUMO-conjugating enzyme UBC9-like isoform X2 [Hevea brasiliensis] >XP_021644854....	[more]
RCW18836.1	4.95e-70	98.08	hypothetical protein GLYMA_19G253000v4 [Glycine max]	[more]

BLAST of CsGy5G002110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TH72	1.52e-71	95.50	Ubiquitin-conjugating enzyme E2-17 kDa OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A7J8XDG8	1.83e-71	93.64	UBC core domain-containing protein (Fragment) OS=Gossypium aridum OX=34290 GN=Go...	[more]
A0A0D2T778	1.72e-70	93.64	UBC core domain-containing protein OS=Gossypium raimondii OX=29730 GN=B456_007G0...	[more]
A0A368UHD6	2.40e-70	98.08	UBC core domain-containing protein OS=Glycine max OX=3847 GN=100305945 PE=3 SV=1	[more]
A0A6J1K529	2.43e-70	99.03	ubiquitin-conjugating enzyme E2-17 kDa-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of CsGy5G002110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27960.1	1.2e-55	96.12	ubiquitin conjugating enzyme 9	[more]
AT4G27960.2	1.2e-55	96.12	ubiquitin conjugating enzyme 9	[more]
AT1G64230.1	1.5e-55	95.15	ubiquitin-conjugating enzyme 28	[more]
AT1G64230.2	1.5e-55	95.15	ubiquitin-conjugating enzyme 28	[more]
AT5G53300.1	1.5e-55	96.12	ubiquitin-conjugating enzyme 10	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 4..125 e-value: 1.5E-42 score: 157.4
None	No IPR available	PANTHER	PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	coord: 3..103
None	No IPR available	PANTHER	PTHR24068:SF346	BNAA01G32320D PROTEIN	coord: 3..103
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 1..117 e-value: 3.7E-53 score: 181.4
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 2..110
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 5..111 e-value: 9.8E-41 score: 138.7
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBC_2	coord: 1..140 score: 44.593769
IPR000608	Ubiquitin-conjugating enzyme E2	CDD	cd00195	UBCc	coord: 3..104 e-value: 9.51554E-56 score: 168.92
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBC_1	coord: 74..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G002110.2	CsGy5G002110.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000209	protein polyubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0061631	ubiquitin conjugating enzyme activity