CsGy5G002110 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy5G002110
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUbiquitin-conjugating enzyme E2
LocationGy14Chr5: 1319986 .. 1326237 (-)
RNA-Seq ExpressionCsGy5G002110
SyntenyCsGy5G002110
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTCTCAGGCAAAACAACAAACACGCAGGAGGATCTCAAGGTGAGCTCTCTTTCTTTCTCAATTCCTTCTCTTCTCTTCTCTTCTCTTCATTTCTTCTTGCTTGTTTTATCTTCTCTACTTATTCATTCATTCATTCATTCATCCATTCTTTTCTGATTCTCAACTCCAAACGATCTTCAGAGCTTCCACTCTTTTGGATTTTGGTTATGGCTTCGAAACGGATCTTGAAAGAGCTCAAGGATCTCCAGAAAGATCCTCCTACGTCTTGCAGTGCAGGTTTCTTCTCCTTCTCCTTCTCCTTCTCCTCCTTGATTTCCACTGCTCTATTACAACAATTCATTATCTATTTATTCCATTTATGTTTTCTCCAATACTGGAACCATTTCTCTTCCCTCTTTATGATCTTCCTCCTTCTACTTCTCCCTTTTCTGTTTATTTGTAGCGTGAGTCACTGTGGATAGATCGCTTTATTTCACGTCTTAATGGACTGTTCTGATCTTTAATTTCTCCTTAAACTCTGCTGTATTTGCTATTGGATCATGGTAACACGCGAGTTAGTATTAGCATATGGTCCTTGTGCATGTTTGTTATTGTGTTGAGGGATAAATCTTGGCGTCGTATTTGGATGAAATATGAATACTACTATTGTTCAGCTTGTTACTAGTTTCCGTGTATATTCTTGTAGGTTTAGAATTATATCTCTTTTCTCTTCCTAATTATTGATTTTAAGAATAATACTACACGGAGAGAAGAAATCATGAGTGAGACAGGAATATTTTTGTATTTCATTGCCAAATATAATCGCATCAGGTTCCAAGAGTATTTATACACAAGATAACTCTCCAGCTGATATGATATGACTAATGTATATTCTCTCTCTAACTGATACGGACACAGTGGAATATTAAGAGCTAGTGTTTTAAGTTAATTTTTCATTAATTATTTAATTAATGCGAATATATTTGAAATCTATCAGACTGACACTTGATCAGCTAACTTAATAAGTGATGAACAAAACACATCATTGACTTTGTTTGTTAATGCTTATGTTAAATAATAGATAACAAAATGAACGTTGGGACTAGAATACCTTTTTTTATATCTAAAGTAAAAAGACTAACAGATAGTGTGAAATATGCATGAAAGTTCAAGACATTGAGATGTTCAGAATGGGAATGGAAAGAAACCGCCCATGGAAATACACGAGATAATCAGAGTTTTATGTTATCAGATGTTTATTGAGCCTTCATTTTGGCTATATAACTCTTGAGTTGTGATATATCCGCAATCAGAGTATTTCAGTAGTGAATTTTTTTATTAAGGATTCTGCATCTAACTTTTTTGTATCATAATTTTCAATTTAATTTGAATTCTTCCTGTGTGAATTGAAAAATTGGGTGTCAAGCTTTCAATCAGCCTCCAAAATTTCTTAATGGGGAATAAGAACCAACTTTGTTCTTACTGATGTATTTATAGCTTAATTCTGTACACCATATCTTCTGAATTGATGGTAAATTTTGTGCTTCATCTTCTTTCCTTGATGAATTTATGTTTGGGAAAGTTTTGCCTCACTTTGACTAGTACTTCAGTTGGTATAACTTACTTATCACTAATGGTTATAGAATTGTTACGTTCACTTGATTTAATAGTCTGTTGAATCAAAATCTTTAGGCCCAGTAGCTGAAGACATGTTCCATTGGCAAGCAACAATTATGGGCCCTCCTGACAGTCCTTATGCAGGAGGAGTGTTTCTTGTCAACATTCATTTCCCTCCAGATTATCCGTTTAAACCACCCAAGGTACTTAGAATTGATATGCTCCATTTACAGACATCTTTTGCCTACACATCTGCATACCTGCGTTTTTTATTTTTTTTTTGACAAGGAAACAGACATTTAATTGTGAAACTTGGGAGTTACAGTTAACAAACTCTTTATGAAGAGTATAAACATCTCATATCCTACTGAAAATTACAAGAAAACCCAAAAACTTGACATCAAATTCTGTTGAGAGAAATGTATTTAAACTTTTTTTGTTTGATCGTTTAGAAATAAAAGCCAACCGTTTACAGTTGTTTCAGAGAGTTTTCTAATAGTGCCATTTTGAAAAGAAACTTTGGGTTCACCGTGTCTTCAGAATCAAGAAGAAAGAAAAAGAGAGTGTGCCACTAAATTAGCCTGATAAGTCGGCAAACATGTAAAACTATTTAACAATTTTGCCTTAGTTAACAATTTTGCCTTGATATCAAAGACTAATTTTTGTAAGCAATCAGGTTTCACTTATATATATACACGGTAAATGTTTTGAGACATCGGCCAAATTCGTAGTATTGGTTGTGATGAGTCCCCTCCACCTCCCACCCACCCGCACTCCCAAGTGGGGGTCGGCAAGAAGTTTTGAGAATTACTAAAAAGTAAAAAAAAAAAAGAACTGTGCAGAATGAAATTATATTATGGTTAGAAGCTATTGTTTAACGTATGGTTAGAAGCTATTGTTTAACGTAGAGACATTTACTAAACGGATATGAATGGGTTAAAATTAATATTGCATAAAATAATTTTATTTGCAGCTGTTTGTTGCCTCCCAAGTGTTTGGGTTCTCGTTAATGGCACTCCTATAGTAAAATTTGGTAGTTTTGGACCATAGACATATCTACGCCCATTCCCTGTCTTAGTGACTAATATGCTTGGGATGCGAGATTGACAAGGAGTTCAAAATTTTCTTGCTTGAAGTAGTTCCAAGTATGAGAAGGTAGAGAGATCAAGTTTGCACAGTCTGTTTTAAGATGACATTGTTGCTTTTGCTTCAGAAACGATAGAAATCTGGAAAATTTATCATGATATTTTTAAGGTGGCTTCTGACTTAAGTGTAACATGGAATCTTCCACCGTTGAATTCGTTGGCTGAGACTTGGCCTCTGAATCCTCGGCTTTCCCCTTGGAATTAATCCCAGCACATGGGCTAATTGCAGCCAAGTACTGAAATGATCCAAGTAATTAGTGGACGATAACAAGGTCTGGTGACCTAACAAAACGGTGAAGTGCTGTTGGGGATAACTCTTGAATTGCATTTCTTTTGGCATCAGCTAAGCTAGTTGCGTGCGAATTTGATAATGATCATTTGCAGTGATTCCATCGCTCTAAATACCTAAAAAGTGGCCATTGTAATCTTTCTCAAAAGGATTACTTTTGTATGTTGAAGTTGAAGAAATAAGCTATCCAATGTCTGACCGAAGTTCCAAGAAGATCATAGAGTAAAGTAAGCTGGAGAGTTCAGGGTTATTTTGTTTTCTGTAAATTAGACATGAACCAGAGACAAGCCGCTTGTCTCCCCTTATAATTATCGCCTCCTTTGAAGGCAAAGCATGGCAATTCAAGATCACCTTTTGAGTCTCTGCACCTTTGCCTCTTGATTTTTAAGTGAACAGTTTTGGGTTTTGGGCATCTATTGCGGGGGGAGGGGACTCTCCAGAACGCCCAGGGACTTCCATGTGCAGCCGATTTAGAGGTTTTGCCACCCTTTATTTATTTTTTAAAATAAAAAGTTCCCAAATCTGGATGGAGAGGAATCCTTGCTTGAAGGACAGAAGTAGACATGAACCGGAGAAGTAAACTCTTGTCTCCCCTATAAAGTTGTTTTAGGGGGTTCTATGGCTAAGCTTATAGCTATTATTTGCAAAGCTAGATGGAGACAGTGCTTGCAGGACAAAGTAGACATTTTGAACCCATTGGGAGTTATTAGATTTTGGGTTACCTACTCAAATTCTCTTGTAATTCTAACCTTCGGTTACTGATAAGATAACTGAGATTCCTTAAACGCTTTGGCTTTGGATTTGATTGGTACCTGTCTTCCTAACTAATACTAATACCCTTTTTAATCATTCTTCTTAAATGAATCTGTTTAATTATCAAACTCAATGTAAGACCATCGATTCATCTACGGTGTTTTAAGTAAGCATCTCCTATTTTCCTTCTCTTTTTCCATAAATGAATAATTCGATTTCCCCATTCAAACATCAGACAGCCTGCTCATTCTATTAGGCTGATGAAGAATTGTTAAATTGTAAACGAGTATTATGACCAAAAACTGACTCAAAGTCCATCCACCCAGTCGTTTTGGGTAGGTCTCAGATGAGATAACCTTCTCGGTGGAGTCATACGTACCTTGATTCAATGACTAAGATAATTCATGTTAAGTTTTCAATTTCTAACCCATTGAGATTTTGACGTGAAGGTTCAATTTTTTACGTATGTCTTTCCAATTGATAGTGATCTTGGTCATGTTAATTACATATCTTACTTACTCATACTATTTTGTGTTGTGTATGTTATGCCAGGTTACATGTTGCTGATTTGAGAACTTGCTAATACACTTAAGTTTATCTAGTAAAATTATTCACTCAATTTCTCTTAATACATAATTGGCATCTAAAGTTGAATTCATTAACTCATACAGGTTGCATTCAGAACAAAGGTCTTTCATCCCAATATCAACAGCAATGGTAGCATATGCCTCGACATACTTAAGGAGCAGTGGAGTCCTGCACTAACCATTTCCAAGGTTGTCACTCTTTGCATAAACCAGTTTTTAAGAGGCGGGAAATATCTGCTGCTATTTGATTCCTATTTTGATATCTTAATTAAGATATTGTGTTTTTTTTTTTACTTTTTACTCATCTAGGGAAGAGTGTCTAGACTGCTTAACAAAACTTTTAAAATAATTTTCCTCGATAAACTAAAGGGGGCTGGTGCATGAAATCCTTGGATGGTACAGGGAATAAATTATAGAGAAAAAAATATCAAGTGGATGCTATGGATGAATGGCCCAAGCATGTCAATTAATTATCATTTTCATGTTGGTGCCTACAGGGAATATGAAATCTAATTACCTCTTTACTTCATGCATTATGGCCTTCCATTAGACTATTACTAGTTTTGTTCATAGTGGTTTCGCTTTGTTCTGTAAACTTAAAGACTTGTTTTCTTCATCCATTCAATCCAACACATTGATTATACATATACTTGGTAACATGTGTTTGTACTCCAGGTGTTACTTTCGATCTGCTCGCTGCTAACGGACCCAAATCCTGATGATCCTTTGGTGCCAGAGATTGCACACATGTACAAGACTGACAGAAGCAAGTACGAAGCAACTGCCAGAAGCTGGACCCAGAAATATGCTATGGGTTAGTGTTTGCTGCTTTGCTCTTAGTGTTGTTTAGAGGAGGGGCGGCTTCTTTCCCAAATGGCCTTTTACTTGGAATTATATCTTTGAATCTGCTTCTTCTTTTATCCAATGGGGTTTAGGTATGTTTCCCTCCTGAAAAAGATAAAAACTCTGCCTGTTCTAAAACTTGTTTGTATGGATAAACAAATTTATCTTTAATCGTGAGAGTATTCCAATAAAAACTTGGACCTACCCTTCATGCTAAAATCTATGCTCAATTATGTACTAATGCCTCTCAAGTGAGCCTCTTGGATTTGGAAAGCTTGGCTAAACACACAACCAATGTCTTTCTTATGTTTGTGTCGGAGAAAATTTCTAACACTAAATCAGTATCATACTTCATTTCATTTCTTCACACTATATATTTTTATTTATAAATATTTATGGAGTCAACATTAATGTTCGTAGATCTTGAACTATACATGTATCGGCAGACAATAAATTGTAGCATATATAGAAAATTTTGATTTGTGTGGATGTGTGTTTGGTGATTTAACCGGGGAGAGGTCTGTAAGAGGCTGACTATTTTCTTAATTGATAAAAACGTTAGTGTGAAATTTTTAGGTAGTTTGATCATTTGGATTTTAGTTTTTCTTTTTTCATAGCCTTTTAAACTTCATTTGGTATCAAGTTGAATTTTGTTTGGTTCTTTATTTTTCTGCTATCTGAAATCAACTTTACTCTCATTTTCTAACCTGTAGTTTGTTAATTTATTTCATTTATTTCTTAAATATGTTTATTCAAATTTAGTATCACATGAAGGTCAAAGGTTCGTGGGTTTTTTTAGAAATAAAAAAGTTAGAGACCCATTTTGAAATTTACCGTCTTAAATCCTGTTTTTCCTTTTTCCTTTTTAATTTATTATGAATTCAATGTTCTTTAAGGAATGGGAAAGAAATTGTTAGAAAACAAAAAAATGATTCAAATAGATATCCACAAGCTCAAAGAAAAACTACTCTCATCCATGTGTTCTCTAATAATTTCTAAATTCATTTCAATAATTGAAAAATAAAAGTTTCTACTATG

mRNA sequence

CCTCTCAGGCAAAACAACAAACACGCAGGAGGATCTCAAGAGCTTCCACTCTTTTGGATTTTGGTTATGGCTTCGAAACGGATCTTGAAAGAGCTCAAGGATCTCCAGAAAGATCCTCCTACGTCTTGCAGTGCAGGCCCAGTAGCTGAAGACATGTTCCATTGGCAAGCAACAATTATGGGCCCTCCTGACAGTCCTTATGCAGGAGGAGTGTTTCTTGTCAACATTCATTTCCCTCCAGATTATCCGTTTAAACCACCCAAGGTTGCATTCAGAACAAAGGTCTTTCATCCCAATATCAACAGCAATGGTAGCATATGCCTCGACATACTTAAGGAGCAGTGGAGTCCTGCACTAACCATTTCCAAGGTTGTCACTCTTTGCATAAACCAGTTTTTAAGAGGCGGGAAATATCTGCTGCTATTTGATTCCTATTTTGATATCTTAATTAAGATATTGTGTTTTTTTTTTTACTTTTTACTCATCTAGGGAAGAGTGTCTAGACTGCTTAACAAAACTTTTAAAATAATTTTCCTCGATAAACTAAAGGGGGCTGGTGCATGAAATCCTTGGATGGTACAGGGAATAAATTATAGAGAAAAAAATATCAAGTGGATGCTATGGATGAATGGCCCAAGCATGTCAATTAATTATCATTTTCATGTTGGTGCCTACAGGGAATATGAAATCTAATTACCTCTTTACTTCATGCATTATGGCCTTCCATTAGACTATTACTAGTTTTGTTCATAGTGGTTTCGCTTTGTTCTGTAAACTTAAAGACTTGTTTTCTTCATCCATTCAATCCAACACATTGATTATACATATACTTGGTAACATGTGTTTGTACTCCAGGTGTTACTTTCGATCTGCTCGCTGCTAACGGACCCAAATCCTGATGATCCTTTGGTGCCAGAGATTGCACACATGTACAAGACTGACAGAAGCAAGTACGAAGCAACTGCCAGAAGCTGGACCCAGAAATATGCTATGGGTTAGTGTTTGCTGCTTTGCTCTTAGTGTTGTTTAGAGGAGGGGCGGCTTCTTTCCCAAATGGCCTTTTACTTGGAATTATATCTTTGAATCTGCTTCTTCTTTTATCCAATGGGGTTTAGGTATGTTTCCCTCCTGAAAAAGATAAAAACTCTGCCTGTTCTAAAACTTGTTTGTATGGATAAACAAATTTATCTTTAATCGTGAGAGTATTCCAATAAAAACTTGGACCTACCCTTCATGCTAAAATCTATGCTCAATTATGTACTAATGCCTCTCAAGTGAGCCTCTTGGATTTGGAAAGCTTGGCTAAACACACAACCAATGTCTTTCTTATGTTTGTGTCGGAGAAAATTTCTAACACTAAATCAGTATCATACTTCATTTCATTTCTTCACACTATATATTTTTATTTATAAATATTTATGGAGTCAACATTAATGTTCGTAGATCTTGAACTATACATGTATCGGCAGACAATAAATTGTAGCATATATAGAAAATTTTGATTTGTGTGGATGTGTGTTTGGTGATTTAACCGGGGAGAGGTCTGTAAGAGGCTGACTATTTTCTTAATTGATAAAAACGTTAGTGTGAAATTTTTAGGTAGTTTGATCATTTGGATTTTAGTTTTTCTTTTTTCATAGCCTTTTAAACTTCATTTGGTATCAAGTTGAATTTTGTTTGGTTCTTTATTTTTCTGCTATCTGAAATCAACTTTACTCTCATTTTCTAACCTGTAGTTTGTTAATTTATTTCATTTATTTCTTAAATATGTTTATTCAAATTTAGTATCACATGAAGGTCAAAGGTTCGTGGGTTTTTTTAGAAATAAAAAAGTTAGAGACCCATTTTGAAATTTACCGTCTTAAATCCTGTTTTTCCTTTTTCCTTTTTAATTTATTATGAATTCAATGTTCTTTAAGGAATGGGAAAGAAATTGTTAGAAAACAAAAAAATGATTCAAATAGATATCCACAAGCTCAAAGAAAAACTACTCTCATCCATGTGTTCTCTAATAATTTCTAAATTCATTTCAATAATTGAAAAATAAAAGTTTCTACTATG

Coding sequence (CDS)

ATGGCTTCGAAACGGATCTTGAAAGAGCTCAAGGATCTCCAGAAAGATCCTCCTACGTCTTGCAGTGCAGGCCCAGTAGCTGAAGACATGTTCCATTGGCAAGCAACAATTATGGGCCCTCCTGACAGTCCTTATGCAGGAGGAGTGTTTCTTGTCAACATTCATTTCCCTCCAGATTATCCGTTTAAACCACCCAAGGTTGCATTCAGAACAAAGGTCTTTCATCCCAATATCAACAGCAATGGTAGCATATGCCTCGACATACTTAAGGAGCAGTGGAGTCCTGCACTAACCATTTCCAAGGTTGTCACTCTTTGCATAAACCAGTTTTTAAGAGGCGGGAAATATCTGCTGCTATTTGATTCCTATTTTGATATCTTAATTAAGATATTGTGTTTTTTTTTTTACTTTTTACTCATCTAG

Protein sequence

MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVVTLCINQFLRGGKYLLLFDSYFDILIKILCFFFYFLLI*
Homology
[Close]
BLAST of CsGy5G002110 vs. ExPASy Swiss-Prot
Match: P35135 (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 5.7e-55
Identity = 100/103 (97.09%), Postives = 102/103 (99.03%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPYAGGVFLV+IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVV 104
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV+
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVL 103

[Close]
BLAST of CsGy5G002110 vs. ExPASy Swiss-Prot
Match: P35132 (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana OX=3702 GN=UBC9 PE=1 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 1.7e-54
Identity = 99/103 (96.12%), Postives = 101/103 (98.06%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVV 104
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV+
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVL 103

[Close]
BLAST of CsGy5G002110 vs. ExPASy Swiss-Prot
Match: P35133 (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana OX=3702 GN=UBC10 PE=1 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.2e-54
Identity = 99/103 (96.12%), Postives = 101/103 (98.06%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP +SPYAGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVV 104
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV+
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVL 103

[Close]
BLAST of CsGy5G002110 vs. ExPASy Swiss-Prot
Match: Q94F47 (Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.2e-54
Identity = 98/103 (95.15%), Postives = 101/103 (98.06%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVV 104
           PFKPPKVAFRTKVFHPN+NSNGSICLDILKEQWSPALTISKV+
Sbjct: 61  PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVL 103

[Close]
BLAST of CsGy5G002110 vs. ExPASy Swiss-Prot
Match: P35131 (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana OX=3702 GN=UBC8 PE=1 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 4.9e-54
Identity = 98/103 (95.15%), Postives = 101/103 (98.06%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP +SPY+GGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVV 104
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV+
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVL 103

[Close]
BLAST of CsGy5G002110 vs. NCBI nr
Match: KAA0042700.1 (ubiquitin-conjugating enzyme E2-17 kDa [Cucumis melo var. makuwa] >TYK06104.1 ubiquitin-conjugating enzyme E2-17 kDa [Cucumis melo var. makuwa])

HSP 1 Score: 220 bits (561), Expect = 3.13e-71
Identity = 106/111 (95.50%), Postives = 106/111 (95.50%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVVTLCINQFL 111
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVV L I   L
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVVLLSICSLL 111

[Close]
BLAST of CsGy5G002110 vs. NCBI nr
Match: MBA0685307.1 (hypothetical protein [Gossypium aridum])

HSP 1 Score: 219 bits (557), Expect = 3.78e-71
Identity = 103/110 (93.64%), Postives = 107/110 (97.27%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVVTLCINQF 110
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV+ L I+++
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVIVLEISRY 110

[Close]
BLAST of CsGy5G002110 vs. NCBI nr
Match: KJB39460.1 (hypothetical protein B456_007G014500 [Gossypium raimondii])

HSP 1 Score: 219 bits (557), Expect = 3.54e-70
Identity = 103/110 (93.64%), Postives = 107/110 (97.27%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLV IHFPPDY
Sbjct: 70  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 129

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVVTLCINQF 110
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV+ L I+++
Sbjct: 130 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVIVLEISRY 179

[Close]
BLAST of CsGy5G002110 vs. NCBI nr
Match: XP_021644853.1 (SUMO-conjugating enzyme UBC9-like isoform X2 [Hevea brasiliensis] >XP_021644854.1 SUMO-conjugating enzyme UBC9-like isoform X2 [Hevea brasiliensis])

HSP 1 Score: 216 bits (551), Expect = 4.16e-70
Identity = 101/106 (95.28%), Postives = 103/106 (97.17%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVVTLC 106
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISK++  C
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKMLNCC 106

[Close]
BLAST of CsGy5G002110 vs. NCBI nr
Match: RCW18836.1 (hypothetical protein GLYMA_19G253000v4 [Glycine max])

HSP 1 Score: 217 bits (552), Expect = 4.95e-70
Identity = 102/104 (98.08%), Postives = 103/104 (99.04%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVVT 104
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV+T
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVMT 104

[Close]
BLAST of CsGy5G002110 vs. ExPASy TrEMBL
Match: A0A5A7TH72 (Ubiquitin-conjugating enzyme E2-17 kDa OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G002050 PE=3 SV=1)

HSP 1 Score: 220 bits (561), Expect = 1.52e-71
Identity = 106/111 (95.50%), Postives = 106/111 (95.50%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVVTLCINQFL 111
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVV L I   L
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVVLLSICSLL 111

[Close]
BLAST of CsGy5G002110 vs. ExPASy TrEMBL
Match: A0A7J8XDG8 (UBC core domain-containing protein (Fragment) OS=Gossypium aridum OX=34290 GN=Goari_012974 PE=3 SV=1)

HSP 1 Score: 219 bits (557), Expect = 1.83e-71
Identity = 103/110 (93.64%), Postives = 107/110 (97.27%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVVTLCINQF 110
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV+ L I+++
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVIVLEISRY 110

[Close]
BLAST of CsGy5G002110 vs. ExPASy TrEMBL
Match: A0A0D2T778 (UBC core domain-containing protein OS=Gossypium raimondii OX=29730 GN=B456_007G014500 PE=3 SV=1)

HSP 1 Score: 219 bits (557), Expect = 1.72e-70
Identity = 103/110 (93.64%), Postives = 107/110 (97.27%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLV IHFPPDY
Sbjct: 70  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 129

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVVTLCINQF 110
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV+ L I+++
Sbjct: 130 PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVIVLEISRY 179

[Close]
BLAST of CsGy5G002110 vs. ExPASy TrEMBL
Match: A0A368UHD6 (UBC core domain-containing protein OS=Glycine max OX=3847 GN=100305945 PE=3 SV=1)

HSP 1 Score: 217 bits (552), Expect = 2.40e-70
Identity = 102/104 (98.08%), Postives = 103/104 (99.04%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVVT 104
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV+T
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVMT 104

[Close]
BLAST of CsGy5G002110 vs. ExPASy TrEMBL
Match: A0A6J1K529 (ubiquitin-conjugating enzyme E2-17 kDa-like OS=Cucurbita maxima OX=3661 GN=LOC111491260 PE=3 SV=1)

HSP 1 Score: 217 bits (553), Expect = 2.43e-70
Identity = 102/103 (99.03%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVV 103
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV+
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVL 103

[Close]
BLAST of CsGy5G002110 vs. TAIR 10
Match: AT4G27960.1 (ubiquitin conjugating enzyme 9 )

HSP 1 Score: 213.4 bits (542), Expect = 1.2e-55
Identity = 99/103 (96.12%), Postives = 101/103 (98.06%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVV 104
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV+
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVL 103

[Close]
BLAST of CsGy5G002110 vs. TAIR 10
Match: AT4G27960.2 (ubiquitin conjugating enzyme 9 )

HSP 1 Score: 213.4 bits (542), Expect = 1.2e-55
Identity = 99/103 (96.12%), Postives = 101/103 (98.06%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLV IHFPPDY
Sbjct: 31  MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 90

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVV 104
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV+
Sbjct: 91  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVL 133

[Close]
BLAST of CsGy5G002110 vs. TAIR 10
Match: AT1G64230.1 (ubiquitin-conjugating enzyme 28 )

HSP 1 Score: 213.0 bits (541), Expect = 1.5e-55
Identity = 98/103 (95.15%), Postives = 101/103 (98.06%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVV 104
           PFKPPKVAFRTKVFHPN+NSNGSICLDILKEQWSPALTISKV+
Sbjct: 61  PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVL 103

[Close]
BLAST of CsGy5G002110 vs. TAIR 10
Match: AT1G64230.2 (ubiquitin-conjugating enzyme 28 )

HSP 1 Score: 213.0 bits (541), Expect = 1.5e-55
Identity = 98/103 (95.15%), Postives = 101/103 (98.06%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVV 104
           PFKPPKVAFRTKVFHPN+NSNGSICLDILKEQWSPALTISKV+
Sbjct: 61  PFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVL 103

[Close]
BLAST of CsGy5G002110 vs. TAIR 10
Match: AT5G53300.1 (ubiquitin-conjugating enzyme 10 )

HSP 1 Score: 213.0 bits (541), Expect = 1.5e-55
Identity = 99/103 (96.12%), Postives = 101/103 (98.06%), Query Frame = 0 

Query: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDY 60
           MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP +SPYAGGVFLV IHFPPDY
Sbjct: 1   MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60

Query: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVV 104
           PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKV+
Sbjct: 61  PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVL 103

The following BLAST results are available for this feature:
BLAST of CsGy5G002110 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P351355.7e-5597.09Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum OX=4081 PE=2 SV=1[more]
P351321.7e-5496.12SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana OX=3702 GN=UBC9 PE=1 SV=1[more]
P351332.2e-5496.12Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana OX=3702 GN=UBC10 PE=1... [more]
Q94F472.2e-5495.15Ubiquitin-conjugating enzyme E2 28 OS=Arabidopsis thaliana OX=3702 GN=UBC28 PE=1... [more]
P351314.9e-5495.15Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana OX=3702 GN=UBC8 PE=1 S... [more]
BLAST of CsGy5G002110 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0042700.13.13e-7195.50ubiquitin-conjugating enzyme E2-17 kDa [Cucumis melo var. makuwa] >TYK06104.1 ub... [more]
MBA0685307.13.78e-7193.64hypothetical protein [Gossypium aridum][more]
KJB39460.13.54e-7093.64hypothetical protein B456_007G014500 [Gossypium raimondii][more]
XP_021644853.14.16e-7095.28SUMO-conjugating enzyme UBC9-like isoform X2 [Hevea brasiliensis] >XP_021644854.... [more]
RCW18836.14.95e-7098.08hypothetical protein GLYMA_19G253000v4 [Glycine max][more]
BLAST of CsGy5G002110 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TH721.52e-7195.50Ubiquitin-conjugating enzyme E2-17 kDa OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A7J8XDG81.83e-7193.64UBC core domain-containing protein (Fragment) OS=Gossypium aridum OX=34290 GN=Go... [more]
A0A0D2T7781.72e-7093.64UBC core domain-containing protein OS=Gossypium raimondii OX=29730 GN=B456_007G0... [more]
A0A368UHD62.40e-7098.08UBC core domain-containing protein OS=Glycine max OX=3847 GN=100305945 PE=3 SV=1[more]
A0A6J1K5292.43e-7099.03ubiquitin-conjugating enzyme E2-17 kDa-like OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
BLAST of CsGy5G002110 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G27960.11.2e-5596.12ubiquitin conjugating enzyme 9 [more]
AT4G27960.21.2e-5596.12ubiquitin conjugating enzyme 9 [more]
AT1G64230.11.5e-5595.15ubiquitin-conjugating enzyme 28 [more]
AT1G64230.21.5e-5595.15ubiquitin-conjugating enzyme 28 [more]
AT5G53300.11.5e-5596.12ubiquitin-conjugating enzyme 10 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 4..125
e-value: 1.5E-42
score: 157.4
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 3..103
NoneNo IPR availablePANTHERPTHR24068:SF346BNAA01G32320D PROTEINcoord: 3..103
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 1..117
e-value: 3.7E-53
score: 181.4
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 2..110
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 5..111
e-value: 9.8E-41
score: 138.7
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 1..140
score: 44.593769
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 3..104
e-value: 9.51554E-56
score: 168.92
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBC_1coord: 74..89

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G002110.2CsGy5G002110.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000209 protein polyubiquitination
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
cellular_component GO:0005634 nucleus
molecular_function GO:0005524 ATP binding
molecular_function GO:0061631 ubiquitin conjugating enzyme activity