CsGy4G004965 (gene) Cucumber (Gy14) v2.1

InterPro
Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25
Position :
0
Zoom :
x 1
ATGTCCTTCTCCATCTCCACCCGCCACCACATACGTCGACTATCTACGGCAGCCGCCGCCGCCGCCACCAATGCCACGGCGACGACGTCCTCTTCTTCATTATCCATCTCAAGAGCGAAGTCTAAACTTAGAACCGAGTATGATCCAGATAAAGCCGTAGAAATTTACTCTTCTGTTTCTAGTCACTACACCTCTCCTGTCACTTCTCGTTACGCTCAAGAAATAACCATCCGCCGCCTTGCTAAGGCCCGTCGATTCAAGGACATCGAATCCCTAATCGAGTCCCATAAAAACGACCCGAAGATCACTCAGGAACCTTTTTTGTCCACCCTGATTCGATCCTACGGTCGAGTTGGTATGTTCGAGCACGCTATGAGGACTTATAATCAAATGGGTGATTTAGGAACTCCACGATCCGCACTATCATTTAATGCCCTGTTAACTGCTTGTAACAATTCGAAGCAATTCGACAAGGTTCCCCAACTGTTCGACGAAATGCCCAAGAGATATAATTTCTCTCCCAATAAGTTCTCGTACGGTATCCTGGTTAAATCCTATTGCGACGCGGGTTCTCCTGAGAAAGCCATGGAGATTGTACGAGAAATGGAGGAAAATGGCGTGGAGGTAAATGCTGTGACATTCACAACCATATTAAATGCTCTGTACAAGAAGGGTGACAGCGCAGAGGCAGAGAAAATATGGGAGACGATGATATCAAAAGGGTGTGAACTTGATGTTGGAGCCTATAATGTTAGATTGATGCACGAACATGGTGGCAAGCCAGAGCATGTACAAGCTTTAATCGAGGAAATGGCTAATTCAGGTTTGAAACCCGATGCAATTAGTTATAATTACTTAATGACTTGTTATTGTAAGAATGGGATGTTTGATGAAGCAAAGAAGGTGTATAACGATATGGAGATAAATGGGTGTAATAAGAATGCTGCAACTTTTAGGACACTTATTTATCACCTTTGTAGAAATGGGGAGTATGAGAAAGGGTACAAGGTTTTTAAGGAGAGTGTGAAGATGAATAAGATTCCTGATTTTAACACGCTGAAGTATTTGGTGGAGGGGCTAGTGGAGAAGAAGATGATGAGAGAAGCCAAAGGTTTAATCAGGACTATAAGGAAGAAATTCCCTCCTGATACTTTGAAGGCTTGGAGAGAAGTTGAGGAAGGGGTTGGTTTGGCTTCCGCTGGTGATGATGTTTCTTCTAAGGATGATGATGAAACTAGAACATGA100200300400500600700800900100011001200Expect = 5.5E-9 / Score = 35.6Expect = 4.6E-12 / Score = 47.8Expect = 2.6E-24 / Score = 88.2Expect = 4.4E-28 / Score = 100.6Expect = 1.5E-5 / Score = 22.8Expect = 1.3E-8 / Score = 32.5Expect = 3.6E-7 / Score = 27.9Expect = 2.3E-10 / Score = 38.0Expect = 3.3E-5 / Score = 21.8Expect = 1.9E-13 / Score = 50.4Score = 12.649398Score = 10.018685Score = 11.268274Score = 12.167101Score = Score = Score = SequencePF17177G3DSA:1.25.40.10G3DSA:1.25.40.10TIGR00756PF13041PS51375PS51375PS51375PS51375PTHR46128PTHR46128:SF14SSF81901
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 122..229
e-value: 5.5E-9
score: 35.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 6..165
e-value: 4.6E-12
score: 47.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 255..408
e-value: 4.4E-28
score: 100.6
coord: 166..254
e-value: 2.6E-24
score: 88.2
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 109..135
e-value: 5.0E-5
score: 21.2
coord: 177..211
e-value: 1.3E-8
score: 32.5
coord: 281..313
e-value: 2.3E-10
score: 38.0
coord: 142..175
e-value: 1.5E-5
score: 22.8
coord: 212..246
e-value: 3.6E-7
score: 27.9
coord: 317..349
e-value: 3.3E-5
score: 21.8
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 278..327
e-value: 1.9E-13
score: 50.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 279..313
score: 12.649398
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 314..348
score: 10.018685
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 210..244
score: 11.268274
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 175..209
score: 12.167101
NoneNo IPR availablePANTHERPTHR46128MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1coord: 8..403
NoneNo IPR availablePANTHERPTHR46128:SF14BNAA09G52830D PROTEINcoord: 8..403
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 186..377