CsGy3G025530 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G025530
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	exosome complex component CSL4
Location	Gy14Chr3: 26214836 .. 26231389 (-)
RNA-Seq Expression	CsGy3G025530
Synteny	CsGy3G025530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATCGGTAGGCGGACAGGCCTTGGCTCGAAATTTTGGGTGCAACCAAGAGCAGAGGGCAGGGCGGCAGTTTGAGTTGAAACTCACTGTGTTCCAATCTCAAAACCTATACTCTCGATACCATTTAGTGTAGATTGGACGGAGTTTGTGAGAATCACAATGAAAGAAGGCGAGAAGGACACTGAGTTCGTCACTCCAGGTGAAGTTCTCGGTAACTTTTCGGATTTCAAACCTGGAAGAGGCGCCTATGTCACCGACAACACTGTTTATGCTTCTCTTTCTGGTTTCCGCCGCATTATTCATCCTCCCTCTGACTCTTCGGATTTGGTACCCTTTTTTACTTCATCTTCTGATGTTTCGAGTTTATTGTTACTGTTATATATTTTGCATCCTTGTTAGTTTTACTTGACATTGTTTGGTTTTTGGACGAAAGGAATTGCTTTCTTTAAACCCCGTTTGAGTTTTTTGCTTTTTTTGGAAAAGGAAAACAATCATACGATGTATTTCAACATCTAATGTGCTTTCTTTCGAACCCTGTTATAGTTTCTTGGGTAGCTGATACTTTGTCGATTTAATTTGATGCTGTTGCTGTCTTAGATTTAACTATGGAAACTACTAGGAAAGGCTCATAATCATGTCTATGGTAATGTATTACGTATATACATTACGTATATACATTACCATAGGACTTATGTAGTTCTTATGTCTCCTATCACTTAAAACGATAACCTTTTCACCTACCGAGGACTCAAATATTCCACCAAGAGGAAGTGTTAGCCTTGAAGGAAGGGTGATCAATGTTTTCAAAATGGTTGGAACCAAGGCCACATCTTTCAGAGGTCGAAGTTAAGACTATAGGCTAGTAATCTGAAGTAACTCTTGGCGCCCTTATCTACCTATGGCAATCAAACCATTCGATCCACTCTTTAGGGGTGTTTGGACCAAACAGTTTGGAAGTAGGAGTTTGAAAGTAGGAAGTTGTGAACTCTAGTCCTTGTTTGGCTCAAAGAGTTTGTAGGATACTTGCTAAAAAACGTTCATTTTATACCCTATCGAATTTCTACATCGTGGGCCCCAAGAGTTCACAACTCCCTAGACTTTGTAAATCCTTTTACTTCTTTGATTCCACCTTTTACCCCTAACACCCCCTAGATCTTTCAATCCATATATTGTCTTTGCAGTTAGAAGTTAATTTCCCATTTAATAGTTGGGGGTCAAAGAACTTACCCATCAATAAAAGATCTCATGGACCTAGTTATTTTGCCATTCGAGATTTTTTTCCTAGGAGACCAAACAATACTAAAATCCCCATCCACACACCAAATAGGGCCACACACAAAAGAGATCTCCTAATTCATCCCAAACTTCTTTCCTCCCATGAATCCTTTAGATCCTAATGACTGTAAAGTCCTTTCCATCTAAATCACAGAAAGTGATCGTAAGGGAGAAAGAACCTCTAGTGACTTCACACGCTATACAAGAACTTGTCTTCCACATAATCAAAATGACTTTACAAGGACCCAATGTGGTCACCTCCCTCCCAAAGAGTACACATGCGAAAAAGGTAAGGTGCACTTCGAGAACGAACAAAGTTTAAGAAGACATGAGGAGACAAATGACTTTAAACAATACTTGTGCCCTTTCCCTTCTTGAAAAAAAGATGAAGACAAAGGAGAAGAAAGGTTGACACATCCCTAAATGGCAAGACCGGTAGGGGAATAAGAAACCAAAGATAGAGGACTTGCCTAACAAGCTAGGCCGTTTGCACTAACCAATGGATACAAGTGAGAGGACGTCTCCTTGCTGAGGGTCAAGTGAGATCCTCCACTTGAAGTTGAACTCAACCTTTTTCCCTTTGCTAGTGTGCCTAATGGAAAGGATTCTAGTTTCTTAGTCATTCTCGTGTATTGCCCAAAAAATGAATCTTCTCCCTTTGGATAGCCAAACTTACAACCACTTCAAAGACAGCTATGCTCGATTAGGCTTAAGGGCAACACCTTCAACAAACACCTCCCCTCCCCTCCTCTGCTTTCTCAATCATTAGAGTGTACAAGGACTCGTTGCCTAAGCAACTCACGATGGATGAGTTAGATTTTTAATCTCCATCTTTCAAAACTTGATTCAAGGGCCCAACCCTAGAAGTTCGTTTGCAGCCCATCTTTGTAAAATGGATCATGCAGATAAAACCAGTTTTAGGAACGCAAAATAGCTTAGAGATTCAAACCTCTTTGTTGACTTTCCTCAATTGTTTAGAATTGTTGTTGCCAAATACTTGATCGTACCCAGTGATGTTTGGATTATTTTTGTGTGTGAGATTTAAAATTCAGAAGGAAGCTTGCTAATTTAGAAAAACTAATAGGGGTATCTTTTGGGATTTAGTCACTTTTTGCTTCTATTTTGCCTCCCACATTTTTTTTTGGTAGCTGCAGCCTAACTCGGATCTACACTAGATGGGCTTCTTTGTTGTGCCCTGGTGTGTGGGATGTTCCATCTCCTCCATTCTTTTGTAATCTCTCTTTGGCTAATGGAAGTATTGTTTTATAGGCTCTACCAAAGAAATAAAATGTAAAATAATCTCGCTAGAGAAGCATCGACTTTGTTTAGTGTCAGCCTCATCCAGCAAACTAAAGGCTTCGAGGGTCTCATTTCTTTGGATACCTAGTTGATGAGGGTGATATAGATATCTAGGTGCACCTCCTGATCCTAAGTTTCTAAGACTCTTGGTCTCTTTATAATTTGAACATATGTTCTTTTCATTATATCAATGTAAACCTCTGTTTCCCTTAAAAAAAGGTCTCATTTTTTGGATATCCAATGATACTAAAGTTCTTGTTCCATTGCTTCATCAATGGTTTCATCCCCTTCAATTTCTGCATAAAAATTAAGCTAGGCTAGGCTAGGCTTGAATGATTTGCAATAAAAGAAATCAAGAAATCCTTATGACTTAACCACATTTTAGAAAAGAAATGGCATAGACTGCTAAGAGAATTTATCAGTAACTAACTAACTCCATCAAATATAACATGAATGAATCTTCTCCTCTTCTAGGCAATATAGGATTTATGTTTGCATCCCCAACATATTCGTAGATAGTTTTATGCTTGACTAGAAGAATATAGTGGAAATATGAACAAATATTTAATACTTAAAAGAATAATTGAAAATATATTTATCTTAGTTAGGTGATGTAGTAGGAATTAGGGTATTATGGTCAAATTCTTAATTTATTGGGATTAGGATTAGTTTGGTTTTGGGTTTTAAATCAAGTACTTCTCTTCTTATATTCACTTTTAAATATTAATAAAATTATCTTATTTGGTATACATCAAATTGGTATCAGAGCAGTTGTTTGGACCAACGTTGATGGCTTCCAGTGGAAGACTAAGAAACTCTTCGTGACATTGATCACTAGATGGAGTTTTTTGAGTTGTGCTCATTGCTGGACAACATACATCTAACAGGGGACCCTTAAAATAAAAAAAACAAAACAAAAAATTCATAAAAATTTTGGAAGAATGGACTATTACTGCTCAAGAAAAAGGACGAAGAAAAAATATAGTAGTTGGTATAGGCAAGAAAGTCAAATTTACTCCCAAAAGCAGTATTGGAATTCTGATTCAAGTGATTCAGAAGAAGAATTCCAACACAATGGTGGAATAATTTCACCTATGCTCGATTTCTCAAAGAACATATCATTATCCACGCTTGGAATTTGATTATAGTGATTCTAGCGAATCCAATGAAGTTACTAATGCAGTGTGGCTATACCAATTTAGGTTTTGTAAAATGTTTTTAATTCATTATTTGAGGCTTACGTCTTGCCTCCTGAAGAGGAAGCCTCAAGGCCACCTTTAGTCTTTTAAACATTGTTTGAGAGCAAAATAAACCTAACTAAGTTTTTAAGAATCTAAATGAATAAACCCACAGACTTTGAATTTCCTTTTGATTTAAAAATGATGTATATTTTAAAAAATGTATGTTGCAATAAACGTGTCCTTGCAATGTATGGAATTTTTATGAATGACGTGTCGTCGTGTCCGTTTCATGTTGTATCTATGTCTTATATTAGATTCATGCTTCATAGATTTTGGTCTTTGAAGAAACTATTACCTTGGTGTACGATTGTATCGTGTTAGGGACTGGATCAGTTTTCCTCTTGTTTTCTCTTATAACTTGGACTGAATAAAACAGGGGAGTGTCTTAAACCCAATTGGTTTTCTTCCCCTATGCTTATATGAGAGCTTAACCTTAGACTTAATGCTTGCCATAGCATGTTATAATGGTTACTTTATTTTCATTATCAATATTTTTCGTCGTCTGTAATTTTTATTTCAAATTGGCTTCTAATAATGGCTTATCTGAATTGTTAGAGATCAACTGTGGAAGTGACTGGTCATAAGGCCCATGGTGCTGTTCCAGCTCCTGGATCTATTGTCATTGTTCGGGTAGGTTCCTTACTGCCCTTCCATTTGTGCATGATATTTAAATTCCCATCATTCTTTAACTTTGTCACCTGTTGATGTATGACTATAGTTGCTTCCACCCCCCTTTTTCCTTTCCTTATCCGTTTTTAATTTTGATATGGGAGATGAAAGGGGAGGGGCTTCTGCTATTGCCTGACAATGACCAATCAAATAATATTTATAAACTCTGGATCAATAGTAACTATACTATTGGGTAGTACAATTGGTCAATTCTATCCTCTAAGTGCTCGATACCCATAAAATCATAGAATAAACACATAAAATTATAGAACGAGCCCAATTAAGTAGAATAAGATAGCACCCTCTGGAGTTATCAATAGACTCGTTGGCAAAATTAATTTTGTATCTTTGAAGGATAACCTCTTTTCATTTCTTCTATCAAAAGTGTTGTTTTATTTTTAGATGAATAAGCAAACTTTGAGAAAAAAGATAAAGGAATAATTATTTTTTTAAAATGATAGCCAGACTTTCATTGGGAAAAAAATGAAAGAGTAAGAGAATAGAATAAAAAAAGCGTTGTTTCTTGTTTTGAAAAATATGGTAGTTTTGAATCTTTGATGTGCTGAGCTCTTATTCAAACAATGAGTACTTTAGCAGTCACAAAGGGTTTATTTGGCCAAAGGAGTTCAGAGTTCGGTGTTGAATGTTTGGAGTTGTGAACTTCACTACTTGTTTGGCCCAAGGAGTTGGTGTGCCCCACTACTAAAAACATCAATTTTATAGTTTATCAACTCCTTAAACTATGGGCTCCTAGAGTTCACAACTCTCCTAACTTCCTTTGCTGTAGTAATTAATTGTCTTTAGCCCCAATTGTGTGTTTCTTTAGTCCTGCTGTGCTAACACACAAAGCATATTTGAGGTAACTGCAATGTACCAAGTTCTATTTCCAATTACATAATAATTGTAATTACGATCAGGGGGATGCTTTTTTGGAATTGGAGGAACCACGAATTGAATATTTGGCCCTTTTGACAATTCTTTTCTTTTCTTGCCGGTTAGATAACTTCTTTTGCGAAGGATGTATTGTTATCCTACTAGGCTAATAAAAAATCATGATGTTCGACACTGTTCTCATTTTTCATTAGGGGATTTAGCATGCACTATATCAATGTTGAAATTTTGTTTTGACAAGTCCTCTACAGCATGTTCGTGTGGAATATATTATTTTTATTTTATCTAGTGAGTTCTACATCAAAAAGTTGTTTTTTATTTTCTCGTGTTATAGAATAATAATAGTAACAATAATAGTAGAAATGTTTAACTAGAAGGTCATGAGTTCAATCCATGGTGACCACCTAGCTAGGAATTAATTTCCTACGAGTTTTCTTGACACCCAAATGTCGTAGGATCAAGCTGGGTTGTCCCGTGAGATTAGTCGATGTACGTAAGCTGGTCCAGACACTTACATATATAAAAAAATGGTAGGAATATTCGCATAGACAAGGAATTTACCATTGGGTTGTTTTATCTATTCCAATACCTTGGCTTAGGGATTTCTATGTGGCTATCTTGTAGGTTGTAAAGGCAAATTTATTATTTTTTTTATTGTCTTCGTCCAACAACAACAAAAAAAAGTACCATCCAACAAGGCTATCTTAGGTTCCAGTTGCTATGAGTAGAACCAGGAGGTTTTCTGTTGAACTGTTTGAAGGAAGAAAAGATTCTATTGATCCTCTCCCGTTGGGTGAAATGATTTGGGTTGGGAGTAGCCAAGCTTCATCAACTACTTCTTAGGCCAAAACTAACATCCTTACACGTGTTAGCTCACCACCTAACAGAAAAACTCAAGATCAATCAAGAACATTTAAAGATAGAAATATATGTATAAAAGAAAAGTTACAATATAACATAGCCTTTTGAGAGGGATATTTGTCTTCCTAATTTCTACAAAAGAAATTACTACAAAAATGATCCACCCGTTAGTCCAACCCAGCCCCCTCTATTTATAGCTGTTAGATGAGATATAATTGAATTCACCTTTCACCCATAAGCTTTGGGTCAGTTGGTGATTAAATCTGTATTAGAGCAGTGTGGTCCAAGATGTCCTGTGTTCAAGTCCTTGCAATGTTGTTTCCTCCCCAATTAGTATTCATTTTCACTTGTTGGATTTCTTTTCATATTTCGTGCCCACAAGTGAGGGAGTGTTAGATATTATATAATTAAGTTTACCTTCGCCCATAAGCATAAGCTTTTCGATCAATCTATGATTTAAGAATAACTAAATTCCTAATAAATTTCCTAATTATTTCCTAATATGCTTCTAATAACCATACTAATAATCCTAATGTATCCCTAACTAGAGGTCTTACATATTCTCTTCTAGTGAATGCAGAGTATTCTCAACAATATAGGAAGAATATTAGGAAAAATAGTCAGGGGGCATCTTATAATGTAGTTCCCTTTGCATAGCGAATAGAATTCCTTGCAGAGGACTTAAACGTTTGAGGATTTTTAAATTGCAAAGTGGCATTGTTGCTAGGTTGGGTTTTTTGTGACTCATGTTCCTTCGGGAAAAAGAAAATATATTAAGGAACAAACTAATAAAAAAAGGTTGAGGTCCAAAAAGAGGTGAGCAATATTTTTTTCTTGAATAAGAAATATTTCATTGATTAATGAAATAGGGGAAAGTAGGAAACCCCAAAGCCAAAAGGCAATTGCAAATGACATTTCCAATTGTAGACTAAATAAGACAAGCTGAAAAGATTAAAGGGGTGTTTATCCTTGTACCAACAAAAAGCAATAGCCAAAATTCCATCCATTAACCAATCAAAAAAGGAAAAAGGATTCTTGAAATTACAGCCGTTGCACTCACACTAAAGAATCCGAAAGAAGGTACATGGAAGAGCCAACCAAATAATCTATAGTATATATAAAAGTATGGATGAGGAGAAACTTTTTGTTTCCAATTTTACCCTTTTTCTTGGTAGATTTATTTGTTTTTTATCTTGGTTTTATTGTAATTTGCTTTTTATTTAAAATTAATTATTAATAAATACGTATATATTAATAGTTTTACTTTTTTCTTTCCAATTAATTATATCATTAACATTTTTCTAAAACCATTCACATCCCTCTATCTTCCACCTATTCACATCCCTCTATCTTCCACCTATTCACATCCCTCTATCTCCTATTCATATTCCCTTAACTCATATTAACTATTTTGTGATTATTTCAACCTTTCAAATTGTTTCCCTTTTCAAATCTTTAGGTATAAATATTCCATTCTTTTTATTTATTTTTCATGTTCAAGTCACAACAAAAAAGTTGGTGTGTGAAGAAATTAGTCTTCCAGCAAGTTCAAATGAAGATTTGTGAACCAAGACTACAAAAGGCCACGAACCTTCATTTGAACTTGTTGAGATGAACATTCCAACTTTGAATAACATTTCTAACAACTTGAAGTTTGAGTTGAGGAGAGCAAGTTTGGTTTTGAGGCTAAAATGGCTCTGTACATTATATAAGTAAAAAATGCTTCTGTTTTATGGCTGCTGCTGAGGTTACATACAATTTGAGGTGAGAGGCTATCTTCTGGGGTTTATGCCATCATTTTGGCGCTGCTTGCAATCTTGAAGAGAGATCCCTATGTTTGTTAGTCACATTTGTTTTTGTCTGGACTGTAACATTGTAAATAGAGAAGAAAAAAAAAGAGGAAATTTTGGATAAGCGAGAAGGGAAAACATATTGTTGTTTAGGCCTTATGGAAGTTAAATAATAAGATTTTTTTTTGTTGGCTGATTATTTACTTTTTATCCGTTGGTTTGGCCATCTTAATGTGTTAAAATGATCTTGATTTAAGTGAAAAACAGACCTTTCTTCTAGGGTGTATTATTCAAAATTTAAAACTTAAATGTTGTTTTTCTCGAGCAGTCATCAAATTTATCCCTTAAAATTATTTTTGCTATTTTAAACATTCGTTATGTAATTGATACATAAAAAAAGCTCTACTCATCAATCTAAAGTTTGATCGAATGGATTGTTTCATAGTCATACTATCAAATTCTTTATATCTTTCAGCTCATTCTATTATACATGGATATAACAAGTCTTGAGGAAGAAATCGCTTTAGAAATAGAGCTGAAAAATGTATTTCCAAAAATTATTTTAAAAAATCACGAGTAAGTAAATATAGTTTCATACTATTTGTATGAAAAATTAACGTGCATAGCACGTGTGTTACTAACTAGTAGATACAAAATTGGAGAAAGAAAAACAATTTTCCTTAAAGATGATGATAGTACAGATTAAACAAAAGAAAAGAGGTCAGAGAAAACCTAACCAATTAACTAAAGAAAATTAAAAGAACAAGAGGGAAAATTACTGGGAGAGAGACAAAGAAAGAAATGTCTTACCTTTTGTGGTGTTTGGACTCTGGAGTGTTTTTTTTTTTTTTGCCGTCACCAATACCAACCTTTTTTTTTTGTATTGTCCAATTAAAGACATATGTAGGTTATCTTTTAGTGTGACTTGGTTCTTCTCAATGATAAAACAACAAACACCAATACTATGATTTTTCTTTCGACTATGAACTCTAAACTTTTCTGTAGTTTTTTTTTCCTCTCTTCGTGTCTTTCTTGATTGATATTTATATTATTGGTCTATGGATGTCTTGGACAATATTTCTTATTATTCTTATCATAATTGTAGGTCACAAAAGTAATGACCAAAATGGCATCAGCTGATATCATGTGTGTTGGTCCAAAGTCTGTGAAGGAGAAGTTTACTGGAATTATAAGGTTTTAAATGTTTTTTTTGTGAAGCTTTTGTTATTCGGTTTTCTTTTCGTTTTTTTTTTCTTTTTTGCATATATTTTATTGTAAGTAGAGACAAAACATACAAATTTACGTGGAAACTCGAGTACCAGAAGAAAAACCACGGTATTTTGTTCTTATTATTTTCTGATAATAGAAGAGTACAAAAGGGTAAAATTTATAGGCAACACAAGCCTTATTAAAAGAATAAAAAATTAGGGCAAAGTAAATCTTAACTACCCATGGGCTTTCATCTAGGCTCAAGCCCACTATTTCTAACACTCCCCCCAAGTTGGGACGTAGATATCAATGTGACCTAACTTGCCACAAAAGTCAAAGTTCTGTCTGAGAAGTCCCTTGGTGAGGACATCATCAACCTGTTGGCTCAAAGAAATGTACGGAATGCATATGCTACCATTGTCCAGCTTTTCTTTGATGAAGTGTCGATCAAACTCAACATGTTTAGTTCTATCATGTTGAACTGAGTTGGCGATGCTAATGGCTGCCTCGTTATTACAAAATAATTTCATTGGTATCTCACAATTTTGATGAAGATCAGACAAAACTTTCTGAAGCCAAATTTCCTCACATATCTCCAAACTCATAGCCATGTACTTGGGATCAACACTTCTTCTGGCCAAGACTCTGTGCTTCTTACTCCTCCAAGTTACAAGATTGCCCCATACAAAGGTACAATAACAGGGGTAGATTTCATATCAACAATAGACCCTGCTCAGTCTGAATCAATATAAGCCTCAAAAGTTTTTCTATCCATCCTTCTGAACATCAATCCTTTACTAGGTGTCATTTTTAAGTTTCTCAGTATTATGTTTACAGCCTCTCAGTATTTGTCGTTGGGAAAGCGTTTTTTACCTCTTGGGGGACGACCATGTAACTTTCAACACTGATCTTTAGTATGCCATTGTTTTTTGCAATTCTCACAGAAAGAAGTTAGTTTTCCATTGTGCTTGTCACTGCCACTGATAGAGGACCTTGCACTAAAAGCAGCAGAGTCAATAGTAGGAGTTGTCGAAATACTCAGAGCACTTGTGTGATCCTCCTTGAGGTGTATTTCAGAATAGACTTCCATTAGGGAGGAAATCGTTCTTTGGCCTAGTATACACCCTCGAACTACATCAAACATAAGATTAAGACCAGCAAGAAAGTTATAAATCCTGTCAATCTCTTCAATTCTAGAGTATTGCAAATCATCACTGGTATTGTTCTAGACTAGTTCTCTGGATAGGTTCATTTTTTGCTAGATATGAGAGATTGTTAAAAAAGGATGTGACATCCATGGTTCCTTGCTTGCATTCATGAACCTGCTTCTTTAGCATGTATAGGCGAGAGACATTATGACGTTTGGAGTAGAGTGTCTAGGCTGTGTCTCAAATATCTTTGGCTGTTGCATCATACAGTAACAACTTGCCAATCTGGGGTTCCATACTGTTTATCAATATGGATCAAAGAAGAGAGTACACTCTCCCTTCCAGTATCGTTCCTGTGGGTCGCCAAGTGGAGGACGAGGTATTTTCCTTGTTAGAAAACCAAATTTATTTCATCCTTCAAGGACCATTTTCACTGACTGAGACCATGAGAAATAACTATTGTCATTGAACTTTCCCCCTGAAAGATGATATCATGTAGACTATGCCGCTACATTAGTCACATAAGAGGATAAAGTGGGAAACGAAGGGGTTCTCCATGTAAGAACAAACACTTCAGATTATTTTGAGGGTGCCCAATTTAATGGGTCGGTATGCCGCTACATTAGTCACATAAGAAGAGGATAAAGTGGGGAATGAAGGGGTTCTCCATGTAAGAACAAACACTTCAGATTATTTTGGGGGTGCCCAATTTGATGGGTCGGTATGTTGTATCCTTTGTAGTAGAGCAGTGGAGAATCTTGATCGTATTCTATCGGGCGTGCTTTGCTTATGCTGAATGGAGTTATTTTTTTAGAAGGTTGCCATAAATTCAGCAGGCATAGAGGCTGTAGAGAGACTTTTAAGGAGCTCCTTGTTGCCATCCTTCTTTTCTATATAAAGGAAGGTTTTAGTGGCAAGTTCGGATTTGTGCTATTCTATGGGGGCTTTGAAGAGAAAAAGAGAAGAAAAAGAAAAAAGAGTTTTTAGAAGGTTTGGAAGGTTCTGATTGAGATTTGGTTCTGTATTAGGTTAGGTTTGATGTGTCCTTGTGGGTGTCCGTGACTAAATCTTCTTGTATCTATCTATAGGCCGTAGACTTATAACGATGGAAGTGGCAAACAAGGAATGTTTTTGTTTTTCATCTTGTTATAATGGAAGTGGAAGACTCATGCTTATCTACTCGACTTTTATCAATAGAAAGCCTTCTTTACCAATTAAACTGCTTTTCCAATTTGGTGGTATAAATAAATTTTATATTATCTGTCTTTTATTTGTCGTTTTTTTAAATTTATTCTGTTTGAGTAATATTACTTTGACAATCATTCTTGCTTTCTATCTTAAATCACTTAAAAATCCCTTCTGTAGGCAACAAGATGTTCGAGCAACAGAGATCGATAAAGTAGATATGCATTTGTCATTTCGTCCTGGTGACATTGTCAAAGCTCTTGTTGTATCCTTTCTGCTTGAAATTCCTCTGCTGCATGTTCATTAAGGATGCAAAAAATTTATTTAGCAGATTGTTAGCGCATAATCTTCCCCAGTTGTCACATGGTCAAAGGATCATCTTGTTAAGGTCAAATTACAAGCTTCGACCTTAAACTTTTAGAATTGTGTAATAGGTCTGAGAATTATAAATGTGTTTCACCTCTCTTTAGTTGTTTAATAGGTCCCTTGAAACTTTTAAAGTCTTGTACACTTTCTAACCTTCAATTTTGTGCTTAATAGATTCCTAATTAGATGTTTTTTAAATTCATCAACCTATTCAGCAAAAATTTGAAAGGTTAGAGTTTTCAGTTCCTGTTGCTTATTCATGAATTTTTTAAAGAAATGTCAATCATTTCTGGAGTCTAGTATATATAGAATTGAAAGTTTAGGGACTTATCAGACATCCTTAAAGTTTAGTAAAACTATTAGACTTAAAATTGAAAGGTAAGGGACTTATTGATCGTTCTATAAAGTCAAGAATCTATTGGATAAAATGCTATGAGTTTTAGGGACTAAACTTGTAATCTAACGATCTAGGCTCAAGCAAACTGTAAACCTAACTCATTCTTTCCACCATAATCTAGAATCTAAAAAATCAACAGCATCTATCAGTTGTTTGTAAAAGTACAATAACAATCACATTGAGGGGCCAAGTTGCTAAATAACGAAAATGTATTTTGAAAACTGAAATGCTACCAGGTGTCTTCATGTTATTCTCAATTCTTATATTTCATTATCTTTCACACTAAAGAAATTTTCTTGGAGGTATTGATATGAGAGTGCATCTATTTGGTACCCCAAATTTCCTTGACCAAAGTTCTCTTCGAAAGCTTTCTCTTGGAGATGCAAGAGCCTATCATCTGTCTACTGCAAAAAACGAACTCGGCGTCGTCTCTGCAGAAAGTACAGCAGGTAAAAACTATAGTACTTTTACGAAGCCTAAAGAGTTATTATTTCCTTTCATGACATTTTAAGTAATTGCTTTTCCTATCTTACTAATTAAAATTCAAACAAATAGGGCAACAAGTTAATCATTAAAAGTAGAGTTCAGCTTGAGCCATTGATTGTTCATGTTCAACTATTTGAACACATGTATATAACATTGATGTTCAAGTTCAACAAGAAATATTCATTTCAAATTCATTTAAGTTTCAGTTTTATGAAATAAAGACATTTGGCACTAATATGTTTAGGAGTACTATGAAATAATGAACATTTCTTTTCATTGATATGATCAAGACATTTGACATTGTTGTCATTTGGGTGTATCTATTCTTGAATTTTCTGTTTCTCTATATTTTGAGTATTTGCCTCTTTTCATTATATCAAAAAGTATTGTTTCCTTTTAAGAAAAAAAACGTAAGAGCATCATGCAAATTCTCTGGTATTTAAGCACTTTGACTCTTATCACTTGACTATGAATGAATATTGATCTCCATAAGCATGCCACTTATTCAAAATGCTTCTTTTTACATCGAAATACATAATGTCTACATGGTTTTTTACTGCTCCTGCCTTTTTGAATTATGTGACTCTGTACTTGGTTACTCATTTGAAAGGACTTGTTGTAACAATTATTTTGAAAGATGCTTTCACACGTGTGCCTAGCTCGGTCTTACGCGTAGCACACATTAAACACGGACCTTCTTTGAAAGCTCTTTTGTTTAGAAGGTTTATTTATGTATTAATTAATTATTATTTTTTAATTCCATAATCCTACTTCAACCGTAATTTATTTTCTTTACATATTACTGTCTTACAAAAAAAGAAAAAGAAAAAAGCTCATGATGCTTTTAGACCTTGCACTAAAACTTTCGTGTTTGATTGGTCTCCGAACTTGAAGTTCAATATGGGATTTAACTCTGTGTTGTGGATTGAATGTAATATTAGGTGCAGAGATGGTTCCCATAAGTTGGACAGAAATGCAGTGTCCAGTAACAGGCCAAATTCAGCAAAGAAAAGTTGCCAAAGTTGGAGGATGATGACTGACTTAACTGGGACAATGATATTCCCTTTTTCCCATTTAATTTTATTTTGCTTTTCGTTTCCAATGCTAGTTTCTCATTTATAAAATCCGGTATCGAGTTTAGAAAATTGCACATTTGATTATGGTAATTGCATAGTTTCTGAAGGGGTCCTTAATTTTCATATAGTATTGTTGATTCAGGATAGGTGGAAGATTATTATTGTAACATTAATTTTGTATGATTGAAATTATCAGCAAGTTTACATCTGTACTATATATAGGAGTATGTTTTTTGCATTCTTAATTAATAATCTATCTATATTCTTTTTTCCTCTCTATATGATAATATCTATACTTAATCATTATCCGCAGTGACGGCTTCTAGAAATGTGGATGTTGAATCTAGACACCAAAGATGTGTTTGGTAATGTTTTCATTTTTTGTTTTTTTGTTTCTGTTTCTAATTTTTGAAAAACGGATGTGTTTGTTAATGTTTTCTGTTTTTTGTTCTAAAAATAATGAGAAACGTTTCTAATTTATCAAGAAATTTGTGGAAACAATAAAAAAGAGTTTCTCCGGTTTCGTTTCTCTTCATTCCTCCTAGATTTCATCTTCTCTCTTCGTTCTCCCTATTCTCTAGTGTCGGCTCTTTCACCTTCATTCTCTAGCATTGACTCTTTCACCTTCGTTCTCTGGCGTCGGCTCTTTCTCCTTTGTTCTTCGGTGTCGACTCTTTCACCTTTGTTCTTTGGCTAGGTCACTTCTTTTTGTTTCTCTCCTGCTAGGGATTGGCTTCGTTCTCCGTTTCTCTTTGGTCAGTCGTGTAGAACTGCTAGCAGTCTGCCAGAGGTAGGGTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCAGTGCCCTATCCAGAGGTAGGGTTTCTTCCACCTTGCTTCGTACACTATCCATAAGAAAAAAAAGTAGAACAAAATAGGTATGCTGTGGTTGCAAAACATAAAGCATGCTTACCTCCTTACTTGATAAAAACATTGAGCAATTCTTAATTTTCTTGCACTAAAGAAGATTTAACTAACAACTAAAGAGAGTGAAGGGATCGAACTAATGGCATAGGATGAAGGAGCACTGCAATAACCACTTGACGAAGGACCTATCACTGCGAGAAGAGCCGAATGGAGGAGGGAACGAGAAGAAGCACCAGATGGCAGAAGACGACGAATGAAAATGACACGAGGAAATTTGCGAGCAAACTGTATGAATCAAAAGATGATGATAGACTGCGAATGCGAGGAACACGGTGACGGACATCGAACGTGAGGAAACTTGACGACACTTAATAATTAGGAAGATCACAATATGACAGTACGGTTGGAGGAAGGGTTTCGACGGTGATGCCTAGAGGATTTGTTTTACGGAGAACGAGAGAAATGTTTTGGTTTTGCGTTTCAAAGGTACTATCAAGGTAAAAAAACATACGATGAAAATACACTAATTGATAAGGTTGTTAAACATCTATCATGCAACAATATGTGAGAAAATGATATGGAAAATTAATGTAATACTAGTTGCAAGCCAAGAACACATAGAAAGGGTAATAAACTCACCAATTTACCTTGCAAAAAGAATTTTTAGATTTACTTTTACTTTTTATCGTAGCTTTGTCGCAAGTTAGGGTGTCGAACCCAAGGAAATGGTTGCTAACAAAAAAATCTTGAAACCAAAGCTTGAAAGGAAAGTGGTTAGTAGAAAAAGGAAAACATAAAAGGATGTGTAGGAAATATCAAGAGAATTTGTACCAAAGAATCAAAGCAAGTTGTTTTTTTAGAAGCAAATTTAATCAACAAACAAAAAGTAAAAATTAATTCTGAGAAAAACAAGCTGGAGCAATGGACATTATTTAATTCTTATCATTGAGCTAAAAGAAACATGAATGAGTTTTGCTTTAAAAAGGAGATTCTTGGCCAAGGTCTTTGCAAGATCAACTTTAAATCCGTGTAAGAACCTTGATTAAGATTCAATCCTTTAATTAAACAAAGAAATATTGAACACATGCGTACTAGAATTGCTTTATCCACACATGCCATTGATCAAAGATATGTGAGAATCAAAATCTTAACCAATAAATTAGATCAAGTTATCTTGCAAGAAAAGAGATAGGGACACACACAAATATTCATTTTTAATCATTGCAACAACAATCCATGCTCAATTCTTGTTCTTGTAAAGAAATTAAAGTACCTTGCATGCTTTGCAGAGAAAAATGCAGCATGGGTTTAATTGAATTTCATTGATGGAATTAAACTCATATTTACGCCCAGAACAAGGATGGTTTATCTAAGCTTTAAGACAATCAATCTTTCAAAAATTAACATGTTCATAACAAGCAAGAAACAATATGAAACTTCTTGTAGACAAAGATAATCAATTAAATCTTGCACTTTAATTTTCTAAACAAAATGTATCTTGCATACTAATTGAACACATAGAATTGAAAGTAGAATTCGTTCTTGAACAAAAATTAAAGAATCAACACGCTAAATTTGAAGAAAAATGGAAGAAACTTTAAAAGAAATTGAACTCATTGTTCTCCTACCTCTTAGAAGATTATCCCATCCATTGGATCAAAGAAGATTGTTGGAGTTTTTGAGAGAAATGATAGAATGGAGAGGGAAGAGTTCTGAAAAAATGAAAATTAGAGAGAATTTTGGTAAAAATTGGAATTGGATTGATGAA

mRNA sequence

TATCGGTAGGCGGACAGGCCTTGGCTCGAAATTTTGGGTGCAACCAAGAGCAGAGGGCAGGGCGGCAGTTTGAGTTGAAACTCACTGTGTTCCAATCTCAAAACCTATACTCTCGATACCATTTAGTGTAGATTGGACGGAGTTTGTGAGAATCACAATGAAAGAAGGCGAGAAGGACACTGAGTTCGTCACTCCAGGTGAAGTTCTCGGTAACTTTTCGGATTTCAAACCTGGAAGAGGCGCCTATGTCACCGACAACACTGTTTATGCTTCTCTTTCTGGTTTCCGCCGCATTATTCATCCTCCCTCTGACTCTTCGGATTTGAGATCAACTGTGGAAGTGACTGGTCATAAGGCCCATGGTGCTGTTCCAGCTCCTGGATCTATTGTCATTGTTCGGGTCACAAAAGTAATGACCAAAATGGCATCAGCTGATATCATGTGTGTTGGTCCAAAGTCTGTGAAGGAGAAGTTTACTGGAATTATAAGGCAACAAGATGTTCGAGCAACAGAGATCGATAAAGTAGATATGCATTTGTCATTTCGTCCTGGTGACATTGTCAAAGCTCTTGTTCTTTCTCTTGGAGATGCAAGAGCCTATCATCTGTCTACTGCAAAAAACGAACTCGGCGTCGTCTCTGCAGAAAGTACAGCAGGTGCAGAGATGGTTCCCATAAGTTGGACAGAAATGCAGTGTCCAGTAACAGGCCAAATTCAGCAAAGAAAAGTTGCCAAAGTTGGAGGATGATGACTGACTTAACTGGGACAATGATATTCCCTTTTTCCCATTTAATTTTATTTTGCTTTTCGTTTCCAATGCTAGTTTCTCATTTATAAAATCCGGTATCGAGTTTAGAAAATTGCACATTTGATTATGGTAATTGCATAGTTTCTGAAGGGGTCCTTAATTTTCATATAGTATTGTTGATTCAGGATAGGTGGAAGATTATTATTGTAACATTAATTTTGTATGATTGAAATTATCAGCAAGTTTACATCTGTACTATATATAGGAGTATGTTTTTTGCATTCTTAATTAATAATCTATCTATATTCTTTTTTCCTCTCTATATGATAATATCTATACTTAATCATTATCCGCAGTGACGGCTTCTAGAAATGTGGATGTTGAATCTAGACACCAAAGATGTGTTTGGTAATGTTTTCATTTTTTGTTTTTTTGTTTCTGTTTCTAATTTTTGAAAAACGGATGTGTTTGTTAATGTTTTCTGTTTTTTGTTCTAAAAATAATGAGAAACGTTTCTAATTTATCAAGAAATTTGTGGAAACAATAAAAAAGAGTTTCTCCGGTTTCGTTTCTCTTCATTCCTCCTAGATTTCATCTTCTCTCTTCGTTCTCCCTATTCTCTAGTGTCGGCTCTTTCACCTTCATTCTCTAGCATTGACTCTTTCACCTTCGTTCTCTGGCGTCGGCTCTTTCTCCTTTGTTCTTCGGTGTCGACTCTTTCACCTTTGTTCTTTGGCTAGGTCACTTCTTTTTGTTTCTCTCCTGCTAGGGATTGGCTTCGTTCTCCGTTTCTCTTTGGTCAGTCGTGTAGAACTGCTAGCAGTCTGCCAGAGGTAGGGTTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCAGTGCCCTATCCAGAGGTAGGGTTTCTTCCACCTTGCTTCGTACACTATCCATAAGAAAAAAAAGTAGAACAAAATAGGTATGCTGTGGTTGCAAAACATAAAGCATGCTTACCTCCTTACTTGATAAAAACATTGAGCAATTCTTAATTTTCTTGCACTAAAGAAGATTTAACTAACAACTAAAGAGAGTGAAGGGATCGAACTAATGGCATAGGATGAAGGAGCACTGCAATAACCACTTGACGAAGGACCTATCACTGCGAGAAGAGCCGAATGGAGGAGGGAACGAGAAGAAGCACCAGATGGCAGAAGACGACGAATGAAAATGACACGAGGAAATTTGCGAGCAAACTGTATGAATCAAAAGATGATGATAGACTGCGAATGCGAGGAACACGGTGACGGACATCGAACGTGAGGAAACTTGACGACACTTAATAATTAGGAAGATCACAATATGACAGTACGGTTGGAGGAAGGGTTTCGACGGTGATGCCTAGAGGATTTGTTTTACGGAGAACGAGAGAAATGTTTTGGTTTTGCGTTTCAAAGGTACTATCAAGGTAAAAAAACATACGATGAAAATACACTAATTGATAAGGTTGTTAAACATCTATCATGCAACAATATGTGAGAAAATGATATGGAAAATTAATGTAATACTAGTTGCAAGCCAAGAACACATAGAAAGGGTAATAAACTCACCAATTTACCTTGCAAAAAGAATTTTTAGATTTACTTTTACTTTTTATCGTAGCTTTGTCGCAAGTTAGGGTGTCGAACCCAAGGAAATGGTTGCTAACAAAAAAATCTTGAAACCAAAGCTTGAAAGGAAAGTGGTTAGTAGAAAAAGGAAAACATAAAAGGATGTGTAGGAAATATCAAGAGAATTTGTACCAAAGAATCAAAGCAAGTTGTTTTTTTAGAAGCAAATTTAATCAACAAACAAAAAGTAAAAATTAATTCTGAGAAAAACAAGCTGGAGCAATGGACATTATTTAATTCTTATCATTGAGCTAAAAGAAACATGAATGAGTTTTGCTTTAAAAAGGAGATTCTTGGCCAAGGTCTTTGCAAGATCAACTTTAAATCCGTGTAAGAACCTTGATTAAGATTCAATCCTTTAATTAAACAAAGAAATATTGAACACATGCGTACTAGAATTGCTTTATCCACACATGCCATTGATCAAAGATATGTGAGAATCAAAATCTTAACCAATAAATTAGATCAAGTTATCTTGCAAGAAAAGAGATAGGGACACACACAAATATTCATTTTTAATCATTGCAACAACAATCCATGCTCAATTCTTGTTCTTGTAAAGAAATTAAAGTACCTTGCATGCTTTGCAGAGAAAAATGCAGCATGGGTTTAATTGAATTTCATTGATGGAATTAAACTCATATTTACGCCCAGAACAAGGATGGTTTATCTAAGCTTTAAGACAATCAATCTTTCAAAAATTAACATGTTCATAACAAGCAAGAAACAATATGAAACTTCTTGTAGACAAAGATAATCAATTAAATCTTGCACTTTAATTTTCTAAACAAAATGTATCTTGCATACTAATTGAACACATAGAATTGAAAGTAGAATTCGTTCTTGAACAAAAATTAAAGAATCAACACGCTAAATTTGAAGAAAAATGGAAGAAACTTTAAAAGAAATTGAACTCATTGTTCTCCTACCTCTTAGAAGATTATCCCATCCATTGGATCAAAGAAGATTGTTGGAGTTTTTGAGAGAAATGATAGAATGGAGAGGGAAGAGTTCTGAAAAAATGAAAATTAGAGAGAATTTTGGTAAAAATTGGAATTGGATTGATGAA

Coding sequence (CDS)

ATGAAAGAAGGCGAGAAGGACACTGAGTTCGTCACTCCAGGTGAAGTTCTCGGTAACTTTTCGGATTTCAAACCTGGAAGAGGCGCCTATGTCACCGACAACACTGTTTATGCTTCTCTTTCTGGTTTCCGCCGCATTATTCATCCTCCCTCTGACTCTTCGGATTTGAGATCAACTGTGGAAGTGACTGGTCATAAGGCCCATGGTGCTGTTCCAGCTCCTGGATCTATTGTCATTGTTCGGGTCACAAAAGTAATGACCAAAATGGCATCAGCTGATATCATGTGTGTTGGTCCAAAGTCTGTGAAGGAGAAGTTTACTGGAATTATAAGGCAACAAGATGTTCGAGCAACAGAGATCGATAAAGTAGATATGCATTTGTCATTTCGTCCTGGTGACATTGTCAAAGCTCTTGTTCTTTCTCTTGGAGATGCAAGAGCCTATCATCTGTCTACTGCAAAAAACGAACTCGGCGTCGTCTCTGCAGAAAGTACAGCAGGTGCAGAGATGGTTCCCATAAGTTGGACAGAAATGCAGTGTCCAGTAACAGGCCAAATTCAGCAAAGAAAAGTTGCCAAAGTTGGAGGATGA

Protein sequence

MKEGEKDTEFVTPGEVLGNFSDFKPGRGAYVTDNTVYASLSGFRRIIHPPSDSSDLRSTVEVTGHKAHGAVPAPGSIVIVRVTKVMTKMASADIMCVGPKSVKEKFTGIIRQQDVRATEIDKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAEMVPISWTEMQCPVTGQIQQRKVAKVGG*

Homology

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BLAST of CsGy3G025530 vs. ExPASy Swiss-Prot
Match: Q9Y3B2 (Exosome complex component CSL4 OS=Homo sapiens OX=9606 GN=EXOSC1 PE=1 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 7.8e-34
Identity = 83/186 (44.62%), Postives = 113/186 (60.75%), Query Frame = 0


Query: 10  FVTPGEVLGNFSDFKPGRGAYVTDNTVYASLSGFRRIIHPPSDSSDLRSTVEVTGHKAHG 69
           +  PGE L N  +  PG G Y     +++SL+G        S  +     V V       
Sbjct: 7   YCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLM----KSSENGALPVVSVVRETESQ 66

Query: 70  AVPAPGSIVIVRVTKVMTKMASADIMCVGPKSVKEKFTGIIRQQDVRATEIDKVDMHLSF 129
            +P  G+IV  +V+ + ++ A   I+ VG   +K  F G IR++DVRATE DKV+++ SF
Sbjct: 67  LLPDVGAIVTCKVSSINSRFAKVHILYVGSMPLKNSFRGTIRKEDVRATEKDKVEIYKSF 126

Query: 130 RPGDIVKALVLSLGDARA-YHLSTAKNELGVVSAESTAGAEMVPISWTEMQCPVTGQIQQ 189
           RPGDIV A V+SLGDA++ Y L+TA+NELGVV A S +G +MVPISW EMQCP T   + 
Sbjct: 127 RPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGIQMVPISWCEMQCPKTHTKEF 186

Query: 190 RKVAKV 195
           RKVA+V
Sbjct: 187 RKVARV 188

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BLAST of CsGy3G025530 vs. ExPASy Swiss-Prot
Match: Q9DAA6 (Exosome complex component CSL4 OS=Mus musculus OX=10090 GN=Exosc1 PE=1 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 3.9e-33
Identity = 81/186 (43.55%), Postives = 116/186 (62.37%), Query Frame = 0


Query: 10  FVTPGEVLGNFSDFKPGRGAYVTDNTVYASLSGFRRIIHPPSDSSDLRSTVEVTGHKAHG 69
           +  PGE L N  +  PG G Y     +++SL+G    +   S++  +   V V       
Sbjct: 7   YCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAG---CLMKTSENGAV-PVVSVMRETESQ 66

Query: 70  AVPAPGSIVIVRVTKVMTKMASADIMCVGPKSVKEKFTGIIRQQDVRATEIDKVDMHLSF 129
            +P  G++V  +V+ + ++ A   I+ VG   +K  F G IR++D+RATE DKV+++ SF
Sbjct: 67  LLPDVGAVVTCKVSSINSRFAKVHILYVGSTPLKNAFRGTIRKEDIRATEKDKVEIYKSF 126

Query: 130 RPGDIVKALVLSLGDARA-YHLSTAKNELGVVSAESTAGAEMVPISWTEMQCPVTGQIQQ 189
           RPGDIV A V+SLGDA++ Y L+TA+NELGVV A S +G +MVPISW EMQCP T   + 
Sbjct: 127 RPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVQMVPISWCEMQCPKTHTKEF 186

Query: 190 RKVAKV 195
           RKVA+V
Sbjct: 187 RKVARV 188

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BLAST of CsGy3G025530 vs. ExPASy Swiss-Prot
Match: O59821 (Exosome complex component csl4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=csl4 PE=3 SV=2)

HSP 1 Score: 111.7 bits (278), Expect = 9.6e-24
Identity = 70/184 (38.04%), Postives = 107/184 (58.15%), Query Frame = 0


Query: 11  VTPGEVLGNFSDFKPGRGAYVTDNTVYASLSGFRRIIHPPSDSSDLRSTVEVTGHKAHGA 70
           V PG+V+   +    G G     + + ++ +G   I  P  +S      VE T       
Sbjct: 4   VLPGQVVARGA--PNGEGTVKRGDYIISTRTG---IFDPEKNSVTYPRKVEET-----AV 63

Query: 71  VPAPGSIVIVRVTKVMTKMASADIMCVGPKSVKEKFTGIIRQQDVRATEIDKVDMHLSFR 130
           +P  GSIV+ RV+++  + A+ +I  V     K++F G+I  QD+RATE +KV +  SFR
Sbjct: 64  LPNVGSIVLARVSRINARQATVNISVVDDVCTKDEFQGVIHVQDIRATEKNKVKVQNSFR 123

Query: 131 PGDIVKALVLSLGDARAYHLSTAKNELGVVSAEST-AGAEMVPISWTEMQCPVTGQIQQR 190
           PGDIV+ALV+SLGD  +Y L+TA+N+LGV+ A+S+  G +M P+ +  MQ   +G  + R
Sbjct: 124 PGDIVRALVISLGDGSSYFLTTARNDLGVIFAQSSETGEQMFPVDYQHMQTK-SGYTEMR 176

Query: 191 KVAK 194
           K AK
Sbjct: 184 KCAK 176

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BLAST of CsGy3G025530 vs. ExPASy Swiss-Prot
Match: P53859 (Exosome complex component CSL4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CSL4 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.7e-18
Identity = 62/173 (35.84%), Postives = 86/173 (49.71%), Query Frame = 0


Query: 57  RSTVEVTGHKAHGAVPAPGSIVIVRVTKVMTKMASADIMCVGPK---------------- 116
           R T +   +     +P  G IV+ RVT++  + A+ +I+ V  K                
Sbjct: 118 RKTNKYANNDFANNLPKEGDIVLTRVTRLSLQRANVEILAVEDKPSPIDSGIGSNGSGIV 177

Query: 117 ------------------SVKEKFTGIIRQQDVRATEIDKVDMHLSFRPGDIVKALVLSL 176
                              + E F GIIR QDVR+T+ D+V +   F+PGDIV+A VLSL
Sbjct: 178 AAGGGSGAATFSVSQASSDLGETFRGIIRSQDVRSTDRDRVKVIECFKPGDIVRAQVLSL 237

Query: 177 GDARAYHLSTAKNELGVVSAEST--AGAEMVPISWTEMQCPVTGQIQQRKVAK 194
           GD   Y+L+TA+N+LGVV A +   AG  M    W  M  PVTG  ++RK AK
Sbjct: 238 GDGTNYYLTTARNDLGVVFARAANGAGGLMYATDWQMMTSPVTGATEKRKCAK 290

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BLAST of CsGy3G025530 vs. ExPASy Swiss-Prot
Match: P38792 (Exosome complex component RRP4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RRP4 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.7e-04
Identity = 45/163 (27.61%), Postives = 74/163 (45.40%), Query Frame = 0


Query: 3   EGEKDTEFVTPGEVLGNFSDFKPGRGAYVTDNTVYASLSGFRRIIHPPSDSSDLRSTVEV 62
           + E D++ VTPGE++ +   +  G G Y  DN  Y+S++G        S  + L S + +
Sbjct: 47  KSESDSQIVTPGELVTDDPIWMRGHGTYFLDNMTYSSVAG------TVSRVNRLLSVIPL 106

Query: 63  TGHKAHGAVPAPGSIVIVRVTKVMTKMASADI-------MCVGPKSVKEKFTGIIRQQDV 122
            G  A    P  G  V+ R+ +V  K    DI       + +G  ++     GI+R    
Sbjct: 107 KGRYA----PETGDHVVGRIAEVGNKRWKVDIGGKQHAVLMLGSVNLP---GGILR---- 166

Query: 123 RATEIDKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELG 159
           R +E D++ M    + GD++ A V SL    +  L T   + G
Sbjct: 167 RKSESDELQMRSFLKEGDLLNAEVQSLFQDGSASLHTRSLKYG 192

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BLAST of CsGy3G025530 vs. NCBI nr
Match: XP_004144376.1 (exosome complex component CSL4 [Cucumis sativus] >KGN58353.1 hypothetical protein Csa_000995 [Cucumis sativus])

HSP 1 Score: 388 bits (996), Expect = 7.52e-136
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MKEGEKDTEFVTPGEVLGNFSDFKPGRGAYVTDNTVYASLSGFRRIIHPPSDSSDLRSTV 60
           MKEGEKDTEFVTPGEVLGNFSDFKPGRGAYVTDNTVYASLSGFRRIIHPPSDSSDLRSTV
Sbjct: 1   MKEGEKDTEFVTPGEVLGNFSDFKPGRGAYVTDNTVYASLSGFRRIIHPPSDSSDLRSTV 60

Query: 61  EVTGHKAHGAVPAPGSIVIVRVTKVMTKMASADIMCVGPKSVKEKFTGIIRQQDVRATEI 120
           EVTGHKAHGAVPAPGSIVIVRVTKVMTKMASADIMCVGPKSVKEKFTGIIRQQDVRATEI
Sbjct: 61  EVTGHKAHGAVPAPGSIVIVRVTKVMTKMASADIMCVGPKSVKEKFTGIIRQQDVRATEI 120

Query: 121 DKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAEMVPISWTEMQC 180
           DKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAEMVPISWTEMQC
Sbjct: 121 DKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAEMVPISWTEMQC 180

Query: 181 PVTGQIQQRKVAKVGG 196
           PVTGQIQQRKVAKVGG
Sbjct: 181 PVTGQIQQRKVAKVGG 196

[Close]

BLAST of CsGy3G025530 vs. NCBI nr
Match: XP_008465048.1 (PREDICTED: exosome complex component CSL4 [Cucumis melo])

HSP 1 Score: 377 bits (969), Expect = 9.84e-132
Identity = 190/196 (96.94%), Postives = 193/196 (98.47%), Query Frame = 0


Query: 1   MKEGEKDTEFVTPGEVLGNFSDFKPGRGAYVTDNTVYASLSGFRRIIHPPSDSSDLRSTV 60
           MKEGEK+TEFVTPGE+LGNFSDFKPGRGAYV DNTVYASLSGFRRII PPSDSSDLRSTV
Sbjct: 1   MKEGEKETEFVTPGEILGNFSDFKPGRGAYVADNTVYASLSGFRRIIPPPSDSSDLRSTV 60

Query: 61  EVTGHKAHGAVPAPGSIVIVRVTKVMTKMASADIMCVGPKSVKEKFTGIIRQQDVRATEI 120
           EVTGHKAHGAVPAPGSIVI RVTKVMTKMASADIMCVGPKSVKEKFTGIIRQQDVRATEI
Sbjct: 61  EVTGHKAHGAVPAPGSIVIARVTKVMTKMASADIMCVGPKSVKEKFTGIIRQQDVRATEI 120

Query: 121 DKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAEMVPISWTEMQC 180
           DKVDMHLSFRPGDIVKALVLSLGDA+AYHLSTAKNELGVVSAESTAGAEMVPISWTEMQC
Sbjct: 121 DKVDMHLSFRPGDIVKALVLSLGDAKAYHLSTAKNELGVVSAESTAGAEMVPISWTEMQC 180

Query: 181 PVTGQIQQRKVAKVGG 196
           PVTGQIQQRKVAKVGG
Sbjct: 181 PVTGQIQQRKVAKVGG 196

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BLAST of CsGy3G025530 vs. NCBI nr
Match: KAG7020862.1 (Exosome complex component CSL4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 355 bits (912), Expect = 4.99e-123
Identity = 178/196 (90.82%), Postives = 187/196 (95.41%), Query Frame = 0


Query: 1   MKEGEKDTEFVTPGEVLGNFSDFKPGRGAYVTDNTVYASLSGFRRIIHPPSDSSDLRSTV 60
           MKEGE++TEFVTPGEVLG FSD KPG+GAYV +NTVYASLSGFRRII PP+DSSD R TV
Sbjct: 1   MKEGEEETEFVTPGEVLGKFSDMKPGKGAYVANNTVYASLSGFRRIISPPTDSSDSRPTV 60

Query: 61  EVTGHKAHGAVPAPGSIVIVRVTKVMTKMASADIMCVGPKSVKEKFTGIIRQQDVRATEI 120
           EVTGHKAHGAVPAPGSIVI RVTKVM +MASADIMCVGPKSVKEKF+G+IRQQDVRATEI
Sbjct: 61  EVTGHKAHGAVPAPGSIVIARVTKVMPRMASADIMCVGPKSVKEKFSGVIRQQDVRATEI 120

Query: 121 DKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAEMVPISWTEMQC 180
           DKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGA MVPISWTEMQC
Sbjct: 121 DKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAVMVPISWTEMQC 180

Query: 181 PVTGQIQQRKVAKVGG 196
           P+TGQIQQRKVAKVGG
Sbjct: 181 PLTGQIQQRKVAKVGG 196

[Close]

BLAST of CsGy3G025530 vs. NCBI nr
Match: XP_023530831.1 (exosome complex component CSL4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 355 bits (912), Expect = 5.36e-123
Identity = 178/196 (90.82%), Postives = 187/196 (95.41%), Query Frame = 0


Query: 1   MKEGEKDTEFVTPGEVLGNFSDFKPGRGAYVTDNTVYASLSGFRRIIHPPSDSSDLRSTV 60
           MKEGE++TEFVTPGEVLG FSD KPG+GAYV +NTVYASLSGFRRII PP+DSSD R TV
Sbjct: 3   MKEGEEETEFVTPGEVLGKFSDMKPGKGAYVANNTVYASLSGFRRIISPPTDSSDSRPTV 62

Query: 61  EVTGHKAHGAVPAPGSIVIVRVTKVMTKMASADIMCVGPKSVKEKFTGIIRQQDVRATEI 120
           EVTGHKAHGAVPAPGSIVI RVTKVM +MASADIMCVGPKSVKEKF+G+IRQQDVRATEI
Sbjct: 63  EVTGHKAHGAVPAPGSIVIARVTKVMPRMASADIMCVGPKSVKEKFSGVIRQQDVRATEI 122

Query: 121 DKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAEMVPISWTEMQC 180
           DKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGA MVPISWTEMQC
Sbjct: 123 DKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAVMVPISWTEMQC 182

Query: 181 PVTGQIQQRKVAKVGG 196
           P+TGQIQQRKVAKVGG
Sbjct: 183 PLTGQIQQRKVAKVGG 198

[Close]

BLAST of CsGy3G025530 vs. NCBI nr
Match: XP_038879159.1 (exosome complex component CSL4 [Benincasa hispida])

HSP 1 Score: 354 bits (909), Expect = 1.43e-122
Identity = 181/197 (91.88%), Postives = 189/197 (95.94%), Query Frame = 0


Query: 1   MKEGEKDT-EFVTPGEVLGNFSDFKPGRGAYVTDNTVYASLSGFRRIIHPPSDSSDLRST 60
           MKEGE++T EFVTPGEVLG FSDF+PGRGAYV +NTVYASLSGFRR I PP+DSSDLRST
Sbjct: 1   MKEGEEETTEFVTPGEVLGIFSDFRPGRGAYVFNNTVYASLSGFRRTIPPPTDSSDLRST 60

Query: 61  VEVTGHKAHGAVPAPGSIVIVRVTKVMTKMASADIMCVGPKSVKEKFTGIIRQQDVRATE 120
           VEVTGHKAHGAVPAPGSIVI RVTKVM+KMASADIMCVGPKSVKEKFTGIIRQQDVRA E
Sbjct: 61  VEVTGHKAHGAVPAPGSIVIARVTKVMSKMASADIMCVGPKSVKEKFTGIIRQQDVRAME 120

Query: 121 IDKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAEMVPISWTEMQ 180
           IDKVDMHLSFRPGD+VKALVLSLGDARAYHLSTAKNELGVVSAESTAGA MVPISWTEMQ
Sbjct: 121 IDKVDMHLSFRPGDVVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAVMVPISWTEMQ 180

Query: 181 CPVTGQIQQRKVAKVGG 196
           CP+TGQIQQRKVAKVGG
Sbjct: 181 CPLTGQIQQRKVAKVGG 197

[Close]

BLAST of CsGy3G025530 vs. ExPASy TrEMBL
Match: A0A0A0L935 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G627150 PE=4 SV=1)

HSP 1 Score: 388 bits (996), Expect = 3.64e-136
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MKEGEKDTEFVTPGEVLGNFSDFKPGRGAYVTDNTVYASLSGFRRIIHPPSDSSDLRSTV 60
           MKEGEKDTEFVTPGEVLGNFSDFKPGRGAYVTDNTVYASLSGFRRIIHPPSDSSDLRSTV
Sbjct: 1   MKEGEKDTEFVTPGEVLGNFSDFKPGRGAYVTDNTVYASLSGFRRIIHPPSDSSDLRSTV 60

Query: 61  EVTGHKAHGAVPAPGSIVIVRVTKVMTKMASADIMCVGPKSVKEKFTGIIRQQDVRATEI 120
           EVTGHKAHGAVPAPGSIVIVRVTKVMTKMASADIMCVGPKSVKEKFTGIIRQQDVRATEI
Sbjct: 61  EVTGHKAHGAVPAPGSIVIVRVTKVMTKMASADIMCVGPKSVKEKFTGIIRQQDVRATEI 120

Query: 121 DKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAEMVPISWTEMQC 180
           DKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAEMVPISWTEMQC
Sbjct: 121 DKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAEMVPISWTEMQC 180

Query: 181 PVTGQIQQRKVAKVGG 196
           PVTGQIQQRKVAKVGG
Sbjct: 181 PVTGQIQQRKVAKVGG 196

[Close]

BLAST of CsGy3G025530 vs. ExPASy TrEMBL
Match: A0A1S3CMV8 (exosome complex component CSL4 OS=Cucumis melo OX=3656 GN=LOC103502755 PE=4 SV=1)

HSP 1 Score: 377 bits (969), Expect = 4.76e-132
Identity = 190/196 (96.94%), Postives = 193/196 (98.47%), Query Frame = 0


Query: 1   MKEGEKDTEFVTPGEVLGNFSDFKPGRGAYVTDNTVYASLSGFRRIIHPPSDSSDLRSTV 60
           MKEGEK+TEFVTPGE+LGNFSDFKPGRGAYV DNTVYASLSGFRRII PPSDSSDLRSTV
Sbjct: 1   MKEGEKETEFVTPGEILGNFSDFKPGRGAYVADNTVYASLSGFRRIIPPPSDSSDLRSTV 60

Query: 61  EVTGHKAHGAVPAPGSIVIVRVTKVMTKMASADIMCVGPKSVKEKFTGIIRQQDVRATEI 120
           EVTGHKAHGAVPAPGSIVI RVTKVMTKMASADIMCVGPKSVKEKFTGIIRQQDVRATEI
Sbjct: 61  EVTGHKAHGAVPAPGSIVIARVTKVMTKMASADIMCVGPKSVKEKFTGIIRQQDVRATEI 120

Query: 121 DKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAEMVPISWTEMQC 180
           DKVDMHLSFRPGDIVKALVLSLGDA+AYHLSTAKNELGVVSAESTAGAEMVPISWTEMQC
Sbjct: 121 DKVDMHLSFRPGDIVKALVLSLGDAKAYHLSTAKNELGVVSAESTAGAEMVPISWTEMQC 180

Query: 181 PVTGQIQQRKVAKVGG 196
           PVTGQIQQRKVAKVGG
Sbjct: 181 PVTGQIQQRKVAKVGG 196

[Close]

BLAST of CsGy3G025530 vs. ExPASy TrEMBL
Match: A0A6J1F6G8 (exosome complex component CSL4 OS=Cucurbita moschata OX=3662 GN=LOC111441251 PE=4 SV=1)

HSP 1 Score: 353 bits (906), Expect = 1.98e-122
Identity = 176/196 (89.80%), Postives = 186/196 (94.90%), Query Frame = 0


Query: 1   MKEGEKDTEFVTPGEVLGNFSDFKPGRGAYVTDNTVYASLSGFRRIIHPPSDSSDLRSTV 60
           MKEGE++TEFVTPGEVLG FSD KPG+GAYV +NTVYASLSGFRRII PP+DSSD R TV
Sbjct: 1   MKEGEEETEFVTPGEVLGKFSDMKPGKGAYVANNTVYASLSGFRRIISPPTDSSDSRPTV 60

Query: 61  EVTGHKAHGAVPAPGSIVIVRVTKVMTKMASADIMCVGPKSVKEKFTGIIRQQDVRATEI 120
           EVTGHKAHGAVPAPGSIV  RVTKVM +MASADIMCVGPKSVKEKF+G+IRQQDVRATEI
Sbjct: 61  EVTGHKAHGAVPAPGSIVTARVTKVMPRMASADIMCVGPKSVKEKFSGVIRQQDVRATEI 120

Query: 121 DKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAEMVPISWTEMQC 180
           DKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGA M+PISWTEMQC
Sbjct: 121 DKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAVMIPISWTEMQC 180

Query: 181 PVTGQIQQRKVAKVGG 196
           P+TGQIQQRKVAKVGG
Sbjct: 181 PLTGQIQQRKVAKVGG 196

[Close]

BLAST of CsGy3G025530 vs. ExPASy TrEMBL
Match: A0A6J1IH52 (exosome complex component CSL4 OS=Cucurbita maxima OX=3661 GN=LOC111472912 PE=4 SV=1)

HSP 1 Score: 353 bits (905), Expect = 3.25e-122
Identity = 177/196 (90.31%), Postives = 186/196 (94.90%), Query Frame = 0


Query: 1   MKEGEKDTEFVTPGEVLGNFSDFKPGRGAYVTDNTVYASLSGFRRIIHPPSDSSDLRSTV 60
           MK GE++TEFVTPGEVLG FSD KPG+GAYV +NTVYASLSGFRRII PP+DSSD R TV
Sbjct: 5   MKVGEEETEFVTPGEVLGKFSDMKPGKGAYVANNTVYASLSGFRRIISPPTDSSDSRPTV 64

Query: 61  EVTGHKAHGAVPAPGSIVIVRVTKVMTKMASADIMCVGPKSVKEKFTGIIRQQDVRATEI 120
           EVTGHKAHGAVPAPGSIVI RVTKVM +MASADIMCVGPKSVKEKF+G+IRQQDVRATEI
Sbjct: 65  EVTGHKAHGAVPAPGSIVIARVTKVMPRMASADIMCVGPKSVKEKFSGVIRQQDVRATEI 124

Query: 121 DKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAEMVPISWTEMQC 180
           DKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGA MVPISWTEMQC
Sbjct: 125 DKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAVMVPISWTEMQC 184

Query: 181 PVTGQIQQRKVAKVGG 196
           P+TGQIQQRKVAKVGG
Sbjct: 185 PLTGQIQQRKVAKVGG 200

[Close]

BLAST of CsGy3G025530 vs. ExPASy TrEMBL
Match: A0A6J1DE54 (exosome complex component CSL4 OS=Momordica charantia OX=3673 GN=LOC111019593 PE=4 SV=1)

HSP 1 Score: 337 bits (863), Expect = 6.86e-116
Identity = 172/196 (87.76%), Postives = 182/196 (92.86%), Query Frame = 0


Query: 1   MKEGEKDTEFVTPGEVLGNFSDFKPGRGAYVTDNTVYASLSGFRRIIHPPSDSSDLRSTV 60
           MKE E +T+FVTPGEVLG  SD K G+GAYV +NTVYASLSGFRRI+ PP +SSD R TV
Sbjct: 1   MKEAE-ETQFVTPGEVLGKPSDLKSGKGAYVANNTVYASLSGFRRILPPPPNSSDSRPTV 60

Query: 61  EVTGHKAHGAVPAPGSIVIVRVTKVMTKMASADIMCVGPKSVKEKFTGIIRQQDVRATEI 120
           EVTGHKAHGAVPAPGS+VI RVT VM++MASADIMCVGPKSVKEKFTGIIRQQDVRATEI
Sbjct: 61  EVTGHKAHGAVPAPGSVVIARVTNVMSRMASADIMCVGPKSVKEKFTGIIRQQDVRATEI 120

Query: 121 DKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAEMVPISWTEMQC 180
           DKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGA MVPISWTEMQC
Sbjct: 121 DKVDMHLSFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAVMVPISWTEMQC 180

Query: 181 PVTGQIQQRKVAKVGG 196
           P+TGQIQQRKVAKVGG
Sbjct: 181 PLTGQIQQRKVAKVGG 195

[Close]

BLAST of CsGy3G025530 vs. TAIR 10
Match: AT5G38890.1 (Nucleic acid-binding, OB-fold-like protein )

HSP 1 Score: 275.0 bits (702), Expect = 4.6e-74
Identity = 135/188 (71.81%), Postives = 158/188 (84.04%), Query Frame = 0


Query: 8   TEFVTPGEVLGNFSDFKPGRGAYVTDNTVYASLSGFRRIIHPPSDSSDLRSTVEVTGHKA 67
           T  VTPG+V+G  ++FK G+GAYV D T+YASL+G  RI+ P  +S D R+ VEVTGHKA
Sbjct: 3   TGLVTPGDVIGKATEFKAGKGAYVNDATIYASLTGTCRIVSPLPESIDQRAIVEVTGHKA 62

Query: 68  HGAVPAPGSIVIVRVTKVMTKMASADIMCVGPKSVKEKFTGIIRQQDVRATEIDKVDMHL 127
           HG +P  GS+VI RVTKVMTKMA+ DI+CVG K+V+E F G+IRQQDVRATEIDKVDMH 
Sbjct: 63  HGPIPETGSVVIARVTKVMTKMAAVDILCVGSKAVRENFAGVIRQQDVRATEIDKVDMHQ 122

Query: 128 SFRPGDIVKALVLSLGDARAYHLSTAKNELGVVSAESTAGAEMVPISWTEMQCPVTGQIQ 187
           SF  GDIV+A+VLSLGDARAY+LSTAKNELGVVSAES AG  MVPISWTEMQCP++GQ +
Sbjct: 123 SFHAGDIVRAMVLSLGDARAYYLSTAKNELGVVSAESAAGETMVPISWTEMQCPLSGQTE 182

Query: 188 QRKVAKVG 196
           QRKVAKVG
Sbjct: 183 QRKVAKVG 190

The following BLAST results are available for this feature:

BLAST of CsGy3G025530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9Y3B2	7.8e-34	44.62	Exosome complex component CSL4 OS=Homo sapiens OX=9606 GN=EXOSC1 PE=1 SV=1	[more]
Q9DAA6	3.9e-33	43.55	Exosome complex component CSL4 OS=Mus musculus OX=10090 GN=Exosc1 PE=1 SV=1	[more]
O59821	9.6e-24	38.04	Exosome complex component csl4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 2...	[more]
P53859	2.7e-18	35.84	Exosome complex component CSL4 OS=Saccharomyces cerevisiae (strain ATCC 204508 /...	[more]
P38792	1.7e-04	27.61	Exosome complex component RRP4 OS=Saccharomyces cerevisiae (strain ATCC 204508 /...	[more]

BLAST of CsGy3G025530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144376.1	7.52e-136	100.00	exosome complex component CSL4 [Cucumis sativus] >KGN58353.1 hypothetical protei...	[more]
XP_008465048.1	9.84e-132	96.94	PREDICTED: exosome complex component CSL4 [Cucumis melo]	[more]
KAG7020862.1	4.99e-123	90.82	Exosome complex component CSL4 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023530831.1	5.36e-123	90.82	exosome complex component CSL4 [Cucurbita pepo subsp. pepo]	[more]
XP_038879159.1	1.43e-122	91.88	exosome complex component CSL4 [Benincasa hispida]	[more]

BLAST of CsGy3G025530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L935	3.64e-136	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G627150 PE=4 SV=1	[more]
A0A1S3CMV8	4.76e-132	96.94	exosome complex component CSL4 OS=Cucumis melo OX=3656 GN=LOC103502755 PE=4 SV=1	[more]
A0A6J1F6G8	1.98e-122	89.80	exosome complex component CSL4 OS=Cucurbita moschata OX=3662 GN=LOC111441251 PE=...	[more]
A0A6J1IH52	3.25e-122	90.31	exosome complex component CSL4 OS=Cucurbita maxima OX=3661 GN=LOC111472912 PE=4 ...	[more]
A0A6J1DE54	6.86e-116	87.76	exosome complex component CSL4 OS=Momordica charantia OX=3673 GN=LOC111019593 PE...	[more]

BLAST of CsGy3G025530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38890.1	4.6e-74	71.81	Nucleic acid-binding, OB-fold-like protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.40.50.140		coord: 65..195 e-value: 1.3E-53 score: 182.2
None	No IPR available	GENE3D	2.40.50.100		coord: 10..60 e-value: 5.2E-9 score: 37.4
None	No IPR available	CDD	cd05791	S1_CSL4	coord: 71..160 e-value: 6.42207E-44 score: 139.688
None	No IPR available	SUPERFAMILY	110324	Ribosomal L27 protein-like	coord: 10..46
IPR019495	Exosome complex component CSL4, C-terminal	PFAM	PF10447	EXOSC1	coord: 101..142 e-value: 2.2E-11 score: 44.3
IPR025721	Exosome complex component, N-terminal domain	PFAM	PF14382	ECR1_N	coord: 10..46 e-value: 1.3E-12 score: 47.3
IPR039771	Exosome complex component Csl4	PANTHER	PTHR12686	3'-5' EXORIBONUCLEASE CSL4-RELATED	coord: 1..195
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 71..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G025530.2	CsGy3G025530.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006396	RNA processing
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0000176	nuclear exosome (RNase complex)
cellular_component	GO:0000178	exosome (RNase complex)
molecular_function	GO:0003723	RNA binding