CsGy3G024785 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G024785
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	cyclic nucleotide-gated ion channel 1-like isoform X1
Location	Gy14Chr3: 25053667 .. 25055373 (-)
RNA-Seq Expression	CsGy3G024785
Synteny	CsGy3G024785

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCATATCTATATTGATCTTCACTCTTCAGTTGTCTCCAACACTTGAAGTTCTCAAGAGTTGTAGTCTAAATGGCCAATGCAAACAATATTACTTTCAGGTTGGTTTTCTTGTTTTCATTTTTGTTTCTCTAAACCTTTACTTGTTCAAATTATTTGGTACCAGAGAGTTTCTTTTTCTTTCTTTAACAAGTATGTTTTCTGACTTCTAACAATTACACAGATAAGGATTTCGATCTTACGCCTCAATTAGAATATAGAAAGAAATAGAGACATGTGTTGAACATGGACTCGTTTCAATTGAACTCGGAAAGTTTGTGAACTGAACTCCTTTCTTTCTCCATGGTTGGAGATGAACTCGTGTAGCTATATGATTTACATACAGGACAAGCTTCGAAGATCAACAACACACAAAATTTGTTCTACGACTTGGGTTTCTCCTTTCATCTATGATAGCTGTCTTCCTCCATGTTTTGTTCTTCTACATCTACAACATAGATTATCAGAAAAGTCAAGAACGCGACCATTGGTGCCAGGTCGGTGACGGACTTCATCCTTCTACTCGAAGTCGCCTACAAGGTCTGCTCAAGTTCAATACTTGACTTATGTCCCAATTCTAAAACGAATGCGGCTCCTCTGACTTTCTTCGGACGCCTTGCTGATGTTAGCAAAAGGGTTCCATGGATGGATGTCCTTGTCGATTTTTTGGCAATGCTTCCCCTTCCACAGGTTCTTCTTCAATACTTTATGTGATTCTTATACCATTCTCTATTTTGGATCATCCCCCATCTACTTTTGGAGTACACTCCAGTGCTAATTCATTTTTATTGGCATACTCATAACATTTTTTTTTATCTTCACCTCTAGTTAATTCGTCTAGAACATTCAGTTTTGTCATTGTCTTTTAAGATTTATATAGAAGAAAGACAATTTAAATCTCAGGATCTATTAGATAACATGAAATTTCAATCGCAAGGAGAGAAGCATGCATCTTTTTAAGATTCTAATTTCTAACATCTATTGATTTTGGGAAAATGCGGTCTTGAGAGGAATATTCATCCATTCTTCTGTTCAAATAGACAAAATTTAAATCCAATTCTATGAAATATATTTTGTTATATTTGCGTTTTTTTAGAAAGGTTGCTATATGCTTAATCATTATCTTTCATGCAATTACCCAGAAATAAATATGAAGTCATGGGTTAAAATAGAAGGTTTACAGCAAAAAAAAGCTCAAAAGTCAAGCCACACTTAACTAAACTGCGGAAAAATTATGTAAATGATCACAAGAAGTACCTTCAAACTTCAATTCTTAACATTGACAACAGGAAATGTGCAGATTATCCTTGTGGGAGTCTTTCCAAGTAGGAAAGGTATCAAATATTTTAAAAACAAGTGGCGACTGATTTTTCTGCCTCTCTTCCAATTTGTCCCAAGAATCATTCGAATCTACCTGTTATGTAAGAAGCTTTCCAGGAGTGCTGCTCCTAATGTCATAACAAAAACCGGGCAGTTCAGAGGCACATTCAATTTCGTCCTCTTCATTCTTGCCAGCCATGTATGTTTTCTTTACCTTCCGTTTATCAAAAATTGAGATTTAGTGCTTTAACGTTCTGAATGATCGTATTGGTTTTGAAGCTGTTGTATTTTTTTCATTTGTGAAGGTGGTTGGAGCATTTTGGTACTGCTTCTCAGTTATAACATAA

mRNA sequence

ATGTCCATATCTATATTGATCTTCACTCTTCAGTTGTCTCCAACACTTGAAGTTCTCAAGAGTTGTAGTCTAAATGGCCAATGCAAACAATATTACTTTCAGATTATCAGAAAAGTCAAGAACGCGACCATTGGTGCCAGGTCGGTGACGGACTTCATCCTTCTACTCGAAGTCGCCTACAAGGTCTGCTCAAGTTCAATACTTGACTTATGTCCCAATTCTAAAACGAATGCGGCTCCTCTGACTTTCTTCGGACGCCTTGCTGATGTTAGCAAAAGGGTTCCATGGATGGATGTCCTTGTCGATTTTTTGGCAATGCTTCCCCTTCCACAGATTATCCTTGTGGGAGTCTTTCCAAGTAGGAAAGGTATCAAATATTTTAAAAACAAGTGGCGACTGATTTTTCTGCCTCTCTTCCAATTTGTCCCAAGAATCATTCGAATCTACCTGTTATGTAAGAAGCTTTCCAGGAGTGCTGCTCCTAATGTCATAACAAAAACCGGGCAGTTCAGAGGCACATTCAATTTCGTCCTCTTCATTCTTGCCAGCCATGTGGTTGGAGCATTTTGGTACTGCTTCTCAGTTATAACATAA

Coding sequence (CDS)

ATGTCCATATCTATATTGATCTTCACTCTTCAGTTGTCTCCAACACTTGAAGTTCTCAAGAGTTGTAGTCTAAATGGCCAATGCAAACAATATTACTTTCAGATTATCAGAAAAGTCAAGAACGCGACCATTGGTGCCAGGTCGGTGACGGACTTCATCCTTCTACTCGAAGTCGCCTACAAGGTCTGCTCAAGTTCAATACTTGACTTATGTCCCAATTCTAAAACGAATGCGGCTCCTCTGACTTTCTTCGGACGCCTTGCTGATGTTAGCAAAAGGGTTCCATGGATGGATGTCCTTGTCGATTTTTTGGCAATGCTTCCCCTTCCACAGATTATCCTTGTGGGAGTCTTTCCAAGTAGGAAAGGTATCAAATATTTTAAAAACAAGTGGCGACTGATTTTTCTGCCTCTCTTCCAATTTGTCCCAAGAATCATTCGAATCTACCTGTTATGTAAGAAGCTTTCCAGGAGTGCTGCTCCTAATGTCATAACAAAAACCGGGCAGTTCAGAGGCACATTCAATTTCGTCCTCTTCATTCTTGCCAGCCATGTGGTTGGAGCATTTTGGTACTGCTTCTCAGTTATAACATAA

Protein sequence

MSISILIFTLQLSPTLEVLKSCSLNGQCKQYYFQIIRKVKNATIGARSVTDFILLLEVAYKVCSSSILDLCPNSKTNAAPLTFFGRLADVSKRVPWMDVLVDFLAMLPLPQIILVGVFPSRKGIKYFKNKWRLIFLPLFQFVPRIIRIYLLCKKLSRSAAPNVITKTGQFRGTFNFVLFILASHVVGAFWYCFSVIT*

Homology

[Close]

BLAST of CsGy3G024785 vs. ExPASy Swiss-Prot
Match: O65717 (Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana OX=3702 GN=CNGC1 PE=1 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.0e-17
Identity = 56/167 (33.53%), Postives = 92/167 (55.09%), Query Frame = 0


Query: 35  IIRKVKNATIGARSVTDFILLLEVAYKVCSSSILDLCPNSKTNAAPLTFFGR------LA 94
           I +K++      RS TD   +L + ++  +  I    P+S+        FGR        
Sbjct: 128 IDKKMEITASVLRSFTDVFYVLHIIFQFRTGFI---APSSRV-------FGRGVLVEDKR 187

Query: 95  DVSKRVPWMDVLVDFLAMLPLPQIILVGVFPSRKGIKYFKNKWRLIFLPLFQFVPRIIRI 154
           +++KR      ++D LA+LPLPQ++++ + P  +G      K  L F+  FQ++PR IRI
Sbjct: 188 EIAKRYLSSHFIIDILAVLPLPQMVILIIIPHMRGSSSLNTKNMLKFIVFFQYIPRFIRI 247

Query: 155 YLLCKKLSRSAAPNVITKTGQFRGTFNFVLFILASHVVGAFWYCFSV 196
           Y L K+++R++   ++T+T      FN  L++LASHV GAFWY FS+
Sbjct: 248 YPLYKEVTRTS--GILTETAWAGAAFNLFLYMLASHVFGAFWYLFSI 282

[Close]

BLAST of CsGy3G024785 vs. ExPASy Swiss-Prot
Match: Q8L7Z0 (Cyclic nucleotide-gated ion channel 17 OS=Arabidopsis thaliana OX=3702 GN=CNGC17 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.5e-13
Identity = 52/155 (33.55%), Postives = 78/155 (50.32%), Query Frame = 0


Query: 47  RSVTDFILLLEVAYKVCSSSILDLCPNSKTNAAPLTFFGR--LADVSKRVPW----MDVL 106
           R++ D   LL +  K  +  I    PNS T       FGR  L    K + W     D +
Sbjct: 129 RTIADLFYLLHIFIKFRTGFI---APNSSTRV-----FGRGELVMDPKAIAWRYIKSDFI 188

Query: 107 VDFLAMLPLPQIILVGVFPSRKGIKYFKNKWRLIFLPLFQFVPRIIRIYLLCKKLSRSAA 166
           +D +A LPLPQI++  V  + K  ++  N   +  + L Q++PR   I  L  ++ +  A
Sbjct: 189 IDLIATLPLPQIVIWFVISTTKSYRFDHNNNAIALIVLLQYIPRFYLIIPLSSQIVK--A 248

Query: 167 PNVITKTGQFRGTFNFVLFILASHVVGAFWYCFSV 196
             V+TKT      +N +L++LASHV+GA WY  SV
Sbjct: 249 TGVVTKTAWAGAAYNLLLYMLASHVLGAAWYILSV 273

[Close]

BLAST of CsGy3G024785 vs. ExPASy Swiss-Prot
Match: Q8RWS9 (Probable cyclic nucleotide-gated ion channel 5 OS=Arabidopsis thaliana OX=3702 GN=CNGC5 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 7.6e-13
Identity = 49/162 (30.25%), Postives = 82/162 (50.62%), Query Frame = 0


Query: 40  KNATIGARSVTDFILLLEVAYKVCSSSILDLCPNSKTNAAPLTFFGR------LADVSKR 99
           +   I A ++  FI +  +A+         + P+S+        FGR       A ++KR
Sbjct: 134 RKLAITASTLRTFIDVFYLAHMALQLRTAYIAPSSRV-------FGRGELVIDPAQIAKR 193

Query: 100 VPWMDVLVDFLAMLPLPQIILVGVFPSRKGIKYFKNKWRLIFLPLFQFVPRIIRIYLLCK 159
                 ++DFL++LPLPQI++     S  G      K  L+F+ L Q++PR +R+  L  
Sbjct: 194 YLQRWFIIDFLSVLPLPQIVVWRFLQSSNGSDVLATKQALLFIVLVQYIPRFLRVLPLTS 253

Query: 160 KLSRSAAPNVITKTGQFRGTFNFVLFILASHVVGAFWYCFSV 196
           +L R+A   V  +T      +  +L++LASH+VGAFWY  ++
Sbjct: 254 ELKRTA--GVFAETAWAGAAYYLLLYMLASHIVGAFWYLLAL 286

[Close]

BLAST of CsGy3G024785 vs. ExPASy Swiss-Prot
Match: Q9SL29 (Putative cyclic nucleotide-gated ion channel 15 OS=Arabidopsis thaliana OX=3702 GN=CNGC15 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.1e-11
Identity = 51/171 (29.82%), Postives = 88/171 (51.46%), Query Frame = 0


Query: 31  YYFQIIRKVKNATIGARSVTDFILLLEVAYKVCSSSILDLCPNSKTNAAPLTFFGR--LA 90
           ++  ++R     TIG R      L+  +A     + IL +   +   A P   FGR  L 
Sbjct: 98  FFLPVMRNEACITIGVRLEVVLTLIRSLADAFYIAQIL-IRFRTAYIAPPSRVFGRGELV 157

Query: 91  DVSKRVPW----MDVLVDFLAMLPLPQIILVGVFPSRKGIKYFKNKWRLIFLPLFQFVPR 150
             S+++ W        +  +A LPLPQ+++  + P+ +G      K  L F+ +FQ+VPR
Sbjct: 158 IDSRKIAWRYLHKSFWIHLVAALPLPQVLIWIIIPNLRGSPMTNTKNVLRFIIIFQYVPR 217

Query: 151 IIRIYLLCKKLSRSAAPNVITKTGQFRGTFNFVLFILASHVVGAFWYCFSV 196
           +  I+ L +++ +  A  V+T+T      +N +L++LASHV+GA WY  +V
Sbjct: 218 MFLIFPLSRQIIK--ATGVVTETAWAGAAYNLMLYMLASHVLGACWYLLAV 265

[Close]

BLAST of CsGy3G024785 vs. ExPASy Swiss-Prot
Match: Q9LNJ0 (Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis thaliana OX=3702 GN=CNGC10 PE=2 SV=2)

HSP 1 Score: 70.1 bits (170), Expect = 3.2e-11
Identity = 49/162 (30.25%), Postives = 87/162 (53.70%), Query Frame = 0


Query: 38  KVKNATIGARSVTDFILLLEVAYKVCSSSILDLCPNSKTNAAPLTFFGRLADVSKRVPWM 97
           K++ A    R++ D   ++ + ++  ++ I    P+S+         G L D +K +   
Sbjct: 115 KLEIAASLLRTLIDAFYIIHIVFQFRTAYI---APSSRVFGR-----GELVDDAKAIALK 174

Query: 98  DV----LVDFLAMLPLPQIILVGVFPSRKGIKYFKNKWRLIFLPLFQFVPRIIRIYLLCK 157
            +    ++D L++LPLPQI+++ V PS         K  L F  + Q+VPRI+R+Y L  
Sbjct: 175 YLSSYFIIDLLSILPLPQIVVLAVIPSVNQPVSLLTKDYLKFSIIAQYVPRILRMYPLYT 234

Query: 158 KLSRSAAPNVITKTGQFRGTFNFVLFILASHVVGAFWYCFSV 196
           +++R++   ++T+T      +N  L++LASHV GA WY  SV
Sbjct: 235 EVTRTS--GIVTETAWAGAAWNLSLYMLASHVFGALWYLISV 266

[Close]

BLAST of CsGy3G024785 vs. NCBI nr
Match: KAE8650810.1 (hypothetical protein Csa_017627 [Cucumis sativus])

HSP 1 Score: 385 bits (988), Expect = 1.35e-134
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MSISILIFTLQLSPTLEVLKSCSLNGQCKQYYFQIIRKVKNATIGARSVTDFILLLEVAY 60
           MSISILIFTLQLSPTLEVLKSCSLNGQCKQYYFQIIRKVKNATIGARSVTDFILLLEVAY
Sbjct: 1   MSISILIFTLQLSPTLEVLKSCSLNGQCKQYYFQIIRKVKNATIGARSVTDFILLLEVAY 60

Query: 61  KVCSSSILDLCPNSKTNAAPLTFFGRLADVSKRVPWMDVLVDFLAMLPLPQIILVGVFPS 120
           KVCSSSILDLCPNSKTNAAPLTFFGRLADVSKRVPWMDVLVDFLAMLPLPQIILVGVFPS
Sbjct: 61  KVCSSSILDLCPNSKTNAAPLTFFGRLADVSKRVPWMDVLVDFLAMLPLPQIILVGVFPS 120

Query: 121 RKGIKYFKNKWRLIFLPLFQFVPRIIRIYLLCKKLSRSAAPNVITKTGQFRGTFNFVLFI 180
           RKGIKYFKNKWRLIFLPLFQFVPRIIRIYLLCKKLSRSAAPNVITKTGQFRGTFNFVLFI
Sbjct: 121 RKGIKYFKNKWRLIFLPLFQFVPRIIRIYLLCKKLSRSAAPNVITKTGQFRGTFNFVLFI 180

Query: 181 LASHVVGAFWYCFSVIT 197
           LASHVVGAFWYCFSVIT
Sbjct: 181 LASHVVGAFWYCFSVIT 197

[Close]

BLAST of CsGy3G024785 vs. NCBI nr
Match: XP_011651603.1 (cyclic nucleotide-gated ion channel 1 isoform X1 [Cucumis sativus] >KAE8650813.1 hypothetical protein Csa_017631 [Cucumis sativus])

HSP 1 Score: 276 bits (707), Expect = 3.20e-87
Identity = 138/164 (84.15%), Postives = 150/164 (91.46%), Query Frame = 0


Query: 33  FQIIRKVKNATIGARSVTDFILLLEVAYKVCSSSILDLCPNSKTNAAPLTFFGRLADVSK 92
           F + +K+KNA IGAR+VTDFILLLEVAYKV SSSIL+LCPNSKTN APLTFFGRLADVSK
Sbjct: 54  FAVDKKIKNAAIGARTVTDFILLLEVAYKVYSSSILELCPNSKTNVAPLTFFGRLADVSK 113

Query: 93  RVPWMDVLVDFLAMLPLPQIILVGVFPSRKGIKYFKNKWRLIFLPLFQFVPRIIRIYLLC 152
           RVPWM V+VDFLA+LPLPQIILV VF SRK IKY KN WRLIFLPLFQFVPRIIRIY+LC
Sbjct: 114 RVPWMSVIVDFLALLPLPQIILVVVFTSRKSIKYLKNSWRLIFLPLFQFVPRIIRIYVLC 173

Query: 153 KKLSRSAAPNVITKTGQFRGTFNFVLFILASHVVGAFWYCFSVI 196
           KKLSRSAAPN IT TGQFRGTFNF+LFI ASHV+GAFWYCF+V+
Sbjct: 174 KKLSRSAAPNDITGTGQFRGTFNFILFIFASHVLGAFWYCFAVL 217

[Close]

BLAST of CsGy3G024785 vs. NCBI nr
Match: XP_016900693.1 (PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X2 [Cucumis melo] >TYK21168.1 cyclic nucleotide-gated ion channel 1-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 267 bits (682), Expect = 1.49e-83
Identity = 134/161 (83.23%), Postives = 144/161 (89.44%), Query Frame = 0


Query: 37  RKVKNATIGARSVTDFILLLEVAYKVCSSSILDLCPNSKTNAAPLTFFGRLADVSKRVPW 96
           RK+KN  + ARSVTDFILLLEVAYKVC SSIL+LCPNSKTNAA LTFFGRLADVSKRVPW
Sbjct: 58  RKIKNVALRARSVTDFILLLEVAYKVCPSSILELCPNSKTNAATLTFFGRLADVSKRVPW 117

Query: 97  MDVLVDFLAMLPLPQIILVGVFPSRKGIKYFKNKWRLIFLPLFQFVPRIIRIYLLCKKLS 156
           MDVLVDFLA+LPLPQIIL GVF +RKGI YF+NKWRLIFLPLFQFVPRIIRI++LCKK S
Sbjct: 118 MDVLVDFLALLPLPQIILGGVFTNRKGITYFENKWRLIFLPLFQFVPRIIRIFVLCKKFS 177

Query: 157 RSAAPNVITKTGQFRGTFNFVLFILASHVVGAFWYCFSVIT 197
           RSAA N IT T QFRG FNFVL I ASHVVG FWYCFS++T
Sbjct: 178 RSAASNDITGTRQFRGIFNFVLLIFASHVVGGFWYCFSILT 218

[Close]

BLAST of CsGy3G024785 vs. NCBI nr
Match: XP_008449547.1 (PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 267 bits (682), Expect = 1.65e-83
Identity = 134/161 (83.23%), Postives = 144/161 (89.44%), Query Frame = 0


Query: 37  RKVKNATIGARSVTDFILLLEVAYKVCSSSILDLCPNSKTNAAPLTFFGRLADVSKRVPW 96
           RK+KN  + ARSVTDFILLLEVAYKVC SSIL+LCPNSKTNAA LTFFGRLADVSKRVPW
Sbjct: 58  RKIKNVALRARSVTDFILLLEVAYKVCPSSILELCPNSKTNAATLTFFGRLADVSKRVPW 117

Query: 97  MDVLVDFLAMLPLPQIILVGVFPSRKGIKYFKNKWRLIFLPLFQFVPRIIRIYLLCKKLS 156
           MDVLVDFLA+LPLPQIIL GVF +RKGI YF+NKWRLIFLPLFQFVPRIIRI++LCKK S
Sbjct: 118 MDVLVDFLALLPLPQIILGGVFTNRKGITYFENKWRLIFLPLFQFVPRIIRIFVLCKKFS 177

Query: 157 RSAAPNVITKTGQFRGTFNFVLFILASHVVGAFWYCFSVIT 197
           RSAA N IT T QFRG FNFVL I ASHVVG FWYCFS++T
Sbjct: 178 RSAASNDITGTRQFRGIFNFVLLIFASHVVGGFWYCFSILT 218

[Close]

BLAST of CsGy3G024785 vs. NCBI nr
Match: KAA0061693.1 (cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 267 bits (682), Expect = 1.69e-83
Identity = 134/161 (83.23%), Postives = 144/161 (89.44%), Query Frame = 0


Query: 37  RKVKNATIGARSVTDFILLLEVAYKVCSSSILDLCPNSKTNAAPLTFFGRLADVSKRVPW 96
           RK+KN  + ARSVTDFILLLEVAYKVC SSIL+LCPNSKTNAA LTFFGRLADVSKRVPW
Sbjct: 58  RKIKNVALRARSVTDFILLLEVAYKVCPSSILELCPNSKTNAATLTFFGRLADVSKRVPW 117

Query: 97  MDVLVDFLAMLPLPQIILVGVFPSRKGIKYFKNKWRLIFLPLFQFVPRIIRIYLLCKKLS 156
           MDVLVDFLA+LPLPQIIL GVF +RKGI YF+NKWRLIFLPLFQFVPRIIRI++LCKK S
Sbjct: 118 MDVLVDFLALLPLPQIILGGVFTNRKGITYFENKWRLIFLPLFQFVPRIIRIFVLCKKFS 177

Query: 157 RSAAPNVITKTGQFRGTFNFVLFILASHVVGAFWYCFSVIT 197
           RSAA N IT T QFRG FNFVL I ASHVVG FWYCFS++T
Sbjct: 178 RSAASNDITGTRQFRGIFNFVLLIFASHVVGGFWYCFSILT 218

[Close]

BLAST of CsGy3G024785 vs. ExPASy TrEMBL
Match: A0A0A0L8V1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G606620 PE=4 SV=1)

HSP 1 Score: 276 bits (707), Expect = 2.22e-90
Identity = 138/164 (84.15%), Postives = 150/164 (91.46%), Query Frame = 0


Query: 33  FQIIRKVKNATIGARSVTDFILLLEVAYKVCSSSILDLCPNSKTNAAPLTFFGRLADVSK 92
           F + +K+KNA IGAR+VTDFILLLEVAYKV SSSIL+LCPNSKTN APLTFFGRLADVSK
Sbjct: 54  FAVDKKIKNAAIGARTVTDFILLLEVAYKVYSSSILELCPNSKTNVAPLTFFGRLADVSK 113

Query: 93  RVPWMDVLVDFLAMLPLPQIILVGVFPSRKGIKYFKNKWRLIFLPLFQFVPRIIRIYLLC 152
           RVPWM V+VDFLA+LPLPQIILV VF SRK IKY KN WRLIFLPLFQFVPRIIRIY+LC
Sbjct: 114 RVPWMSVIVDFLALLPLPQIILVVVFTSRKSIKYLKNSWRLIFLPLFQFVPRIIRIYVLC 173

Query: 153 KKLSRSAAPNVITKTGQFRGTFNFVLFILASHVVGAFWYCFSVI 196
           KKLSRSAAPN IT TGQFRGTFNF+LFI ASHV+GAFWYCF+V+
Sbjct: 174 KKLSRSAAPNDITGTGQFRGTFNFILFIFASHVLGAFWYCFAVL 217

[Close]

BLAST of CsGy3G024785 vs. ExPASy TrEMBL
Match: A0A5D3DCD7 (Cyclic nucleotide-gated ion channel 1-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75860G00390 PE=4 SV=1)

HSP 1 Score: 267 bits (682), Expect = 7.19e-84
Identity = 134/161 (83.23%), Postives = 144/161 (89.44%), Query Frame = 0


Query: 37  RKVKNATIGARSVTDFILLLEVAYKVCSSSILDLCPNSKTNAAPLTFFGRLADVSKRVPW 96
           RK+KN  + ARSVTDFILLLEVAYKVC SSIL+LCPNSKTNAA LTFFGRLADVSKRVPW
Sbjct: 58  RKIKNVALRARSVTDFILLLEVAYKVCPSSILELCPNSKTNAATLTFFGRLADVSKRVPW 117

Query: 97  MDVLVDFLAMLPLPQIILVGVFPSRKGIKYFKNKWRLIFLPLFQFVPRIIRIYLLCKKLS 156
           MDVLVDFLA+LPLPQIIL GVF +RKGI YF+NKWRLIFLPLFQFVPRIIRI++LCKK S
Sbjct: 118 MDVLVDFLALLPLPQIILGGVFTNRKGITYFENKWRLIFLPLFQFVPRIIRIFVLCKKFS 177

Query: 157 RSAAPNVITKTGQFRGTFNFVLFILASHVVGAFWYCFSVIT 197
           RSAA N IT T QFRG FNFVL I ASHVVG FWYCFS++T
Sbjct: 178 RSAASNDITGTRQFRGIFNFVLLIFASHVVGGFWYCFSILT 218

[Close]

BLAST of CsGy3G024785 vs. ExPASy TrEMBL
Match: A0A1S4DXJ0 (cyclic nucleotide-gated ion channel 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491398 PE=4 SV=1)

HSP 1 Score: 267 bits (682), Expect = 7.19e-84
Identity = 134/161 (83.23%), Postives = 144/161 (89.44%), Query Frame = 0


Query: 37  RKVKNATIGARSVTDFILLLEVAYKVCSSSILDLCPNSKTNAAPLTFFGRLADVSKRVPW 96
           RK+KN  + ARSVTDFILLLEVAYKVC SSIL+LCPNSKTNAA LTFFGRLADVSKRVPW
Sbjct: 58  RKIKNVALRARSVTDFILLLEVAYKVCPSSILELCPNSKTNAATLTFFGRLADVSKRVPW 117

Query: 97  MDVLVDFLAMLPLPQIILVGVFPSRKGIKYFKNKWRLIFLPLFQFVPRIIRIYLLCKKLS 156
           MDVLVDFLA+LPLPQIIL GVF +RKGI YF+NKWRLIFLPLFQFVPRIIRI++LCKK S
Sbjct: 118 MDVLVDFLALLPLPQIILGGVFTNRKGITYFENKWRLIFLPLFQFVPRIIRIFVLCKKFS 177

Query: 157 RSAAPNVITKTGQFRGTFNFVLFILASHVVGAFWYCFSVIT 197
           RSAA N IT T QFRG FNFVL I ASHVVG FWYCFS++T
Sbjct: 178 RSAASNDITGTRQFRGIFNFVLLIFASHVVGGFWYCFSILT 218

[Close]

BLAST of CsGy3G024785 vs. ExPASy TrEMBL
Match: A0A1S3BLM4 (cyclic nucleotide-gated ion channel 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491398 PE=4 SV=1)

HSP 1 Score: 267 bits (682), Expect = 7.97e-84
Identity = 134/161 (83.23%), Postives = 144/161 (89.44%), Query Frame = 0


Query: 37  RKVKNATIGARSVTDFILLLEVAYKVCSSSILDLCPNSKTNAAPLTFFGRLADVSKRVPW 96
           RK+KN  + ARSVTDFILLLEVAYKVC SSIL+LCPNSKTNAA LTFFGRLADVSKRVPW
Sbjct: 58  RKIKNVALRARSVTDFILLLEVAYKVCPSSILELCPNSKTNAATLTFFGRLADVSKRVPW 117

Query: 97  MDVLVDFLAMLPLPQIILVGVFPSRKGIKYFKNKWRLIFLPLFQFVPRIIRIYLLCKKLS 156
           MDVLVDFLA+LPLPQIIL GVF +RKGI YF+NKWRLIFLPLFQFVPRIIRI++LCKK S
Sbjct: 118 MDVLVDFLALLPLPQIILGGVFTNRKGITYFENKWRLIFLPLFQFVPRIIRIFVLCKKFS 177

Query: 157 RSAAPNVITKTGQFRGTFNFVLFILASHVVGAFWYCFSVIT 197
           RSAA N IT T QFRG FNFVL I ASHVVG FWYCFS++T
Sbjct: 178 RSAASNDITGTRQFRGIFNFVLLIFASHVVGGFWYCFSILT 218

[Close]

BLAST of CsGy3G024785 vs. ExPASy TrEMBL
Match: A0A5A7V0L3 (Cyclic nucleotide-gated ion channel 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G00660 PE=4 SV=1)

HSP 1 Score: 267 bits (682), Expect = 8.17e-84
Identity = 134/161 (83.23%), Postives = 144/161 (89.44%), Query Frame = 0


Query: 37  RKVKNATIGARSVTDFILLLEVAYKVCSSSILDLCPNSKTNAAPLTFFGRLADVSKRVPW 96
           RK+KN  + ARSVTDFILLLEVAYKVC SSIL+LCPNSKTNAA LTFFGRLADVSKRVPW
Sbjct: 58  RKIKNVALRARSVTDFILLLEVAYKVCPSSILELCPNSKTNAATLTFFGRLADVSKRVPW 117

Query: 97  MDVLVDFLAMLPLPQIILVGVFPSRKGIKYFKNKWRLIFLPLFQFVPRIIRIYLLCKKLS 156
           MDVLVDFLA+LPLPQIIL GVF +RKGI YF+NKWRLIFLPLFQFVPRIIRI++LCKK S
Sbjct: 118 MDVLVDFLALLPLPQIILGGVFTNRKGITYFENKWRLIFLPLFQFVPRIIRIFVLCKKFS 177

Query: 157 RSAAPNVITKTGQFRGTFNFVLFILASHVVGAFWYCFSVIT 197
           RSAA N IT T QFRG FNFVL I ASHVVG FWYCFS++T
Sbjct: 178 RSAASNDITGTRQFRGIFNFVLLIFASHVVGGFWYCFSILT 218

[Close]

BLAST of CsGy3G024785 vs. TAIR 10
Match: AT5G53130.1 (cyclic nucleotide gated channel 1 )

HSP 1 Score: 90.1 bits (222), Expect = 2.1e-18
Identity = 56/167 (33.53%), Postives = 92/167 (55.09%), Query Frame = 0


Query: 35  IIRKVKNATIGARSVTDFILLLEVAYKVCSSSILDLCPNSKTNAAPLTFFGR------LA 94
           I +K++      RS TD   +L + ++  +  I    P+S+        FGR        
Sbjct: 128 IDKKMEITASVLRSFTDVFYVLHIIFQFRTGFI---APSSRV-------FGRGVLVEDKR 187

Query: 95  DVSKRVPWMDVLVDFLAMLPLPQIILVGVFPSRKGIKYFKNKWRLIFLPLFQFVPRIIRI 154
           +++KR      ++D LA+LPLPQ++++ + P  +G      K  L F+  FQ++PR IRI
Sbjct: 188 EIAKRYLSSHFIIDILAVLPLPQMVILIIIPHMRGSSSLNTKNMLKFIVFFQYIPRFIRI 247

Query: 155 YLLCKKLSRSAAPNVITKTGQFRGTFNFVLFILASHVVGAFWYCFSV 196
           Y L K+++R++   ++T+T      FN  L++LASHV GAFWY FS+
Sbjct: 248 YPLYKEVTRTS--GILTETAWAGAAFNLFLYMLASHVFGAFWYLFSI 282

[Close]

BLAST of CsGy3G024785 vs. TAIR 10
Match: AT4G30360.1 (cyclic nucleotide-gated channel 17 )

HSP 1 Score: 76.3 bits (186), Expect = 3.2e-14
Identity = 52/155 (33.55%), Postives = 78/155 (50.32%), Query Frame = 0


Query: 47  RSVTDFILLLEVAYKVCSSSILDLCPNSKTNAAPLTFFGR--LADVSKRVPW----MDVL 106
           R++ D   LL +  K  +  I    PNS T       FGR  L    K + W     D +
Sbjct: 129 RTIADLFYLLHIFIKFRTGFI---APNSSTRV-----FGRGELVMDPKAIAWRYIKSDFI 188

Query: 107 VDFLAMLPLPQIILVGVFPSRKGIKYFKNKWRLIFLPLFQFVPRIIRIYLLCKKLSRSAA 166
           +D +A LPLPQI++  V  + K  ++  N   +  + L Q++PR   I  L  ++ +  A
Sbjct: 189 IDLIATLPLPQIVIWFVISTTKSYRFDHNNNAIALIVLLQYIPRFYLIIPLSSQIVK--A 248

Query: 167 PNVITKTGQFRGTFNFVLFILASHVVGAFWYCFSV 196
             V+TKT      +N +L++LASHV+GA WY  SV
Sbjct: 249 TGVVTKTAWAGAAYNLLLYMLASHVLGAAWYILSV 273

[Close]

BLAST of CsGy3G024785 vs. TAIR 10
Match: AT5G57940.1 (cyclic nucleotide gated channel 5 )

HSP 1 Score: 75.5 bits (184), Expect = 5.4e-14
Identity = 49/162 (30.25%), Postives = 82/162 (50.62%), Query Frame = 0


Query: 40  KNATIGARSVTDFILLLEVAYKVCSSSILDLCPNSKTNAAPLTFFGR------LADVSKR 99
           +   I A ++  FI +  +A+         + P+S+        FGR       A ++KR
Sbjct: 134 RKLAITASTLRTFIDVFYLAHMALQLRTAYIAPSSRV-------FGRGELVIDPAQIAKR 193

Query: 100 VPWMDVLVDFLAMLPLPQIILVGVFPSRKGIKYFKNKWRLIFLPLFQFVPRIIRIYLLCK 159
                 ++DFL++LPLPQI++     S  G      K  L+F+ L Q++PR +R+  L  
Sbjct: 194 YLQRWFIIDFLSVLPLPQIVVWRFLQSSNGSDVLATKQALLFIVLVQYIPRFLRVLPLTS 253

Query: 160 KLSRSAAPNVITKTGQFRGTFNFVLFILASHVVGAFWYCFSV 196
           +L R+A   V  +T      +  +L++LASH+VGAFWY  ++
Sbjct: 254 ELKRTA--GVFAETAWAGAAYYLLLYMLASHIVGAFWYLLAL 286

[Close]

BLAST of CsGy3G024785 vs. TAIR 10
Match: AT5G57940.3 (cyclic nucleotide gated channel 5 )

HSP 1 Score: 75.5 bits (184), Expect = 5.4e-14
Identity = 49/162 (30.25%), Postives = 82/162 (50.62%), Query Frame = 0


Query: 40  KNATIGARSVTDFILLLEVAYKVCSSSILDLCPNSKTNAAPLTFFGR------LADVSKR 99
           +   I A ++  FI +  +A+         + P+S+        FGR       A ++KR
Sbjct: 127 RKLAITASTLRTFIDVFYLAHMALQLRTAYIAPSSRV-------FGRGELVIDPAQIAKR 186

Query: 100 VPWMDVLVDFLAMLPLPQIILVGVFPSRKGIKYFKNKWRLIFLPLFQFVPRIIRIYLLCK 159
                 ++DFL++LPLPQI++     S  G      K  L+F+ L Q++PR +R+  L  
Sbjct: 187 YLQRWFIIDFLSVLPLPQIVVWRFLQSSNGSDVLATKQALLFIVLVQYIPRFLRVLPLTS 246

Query: 160 KLSRSAAPNVITKTGQFRGTFNFVLFILASHVVGAFWYCFSV 196
           +L R+A   V  +T      +  +L++LASH+VGAFWY  ++
Sbjct: 247 ELKRTA--GVFAETAWAGAAYYLLLYMLASHIVGAFWYLLAL 279

[Close]

BLAST of CsGy3G024785 vs. TAIR 10
Match: AT5G57940.2 (cyclic nucleotide gated channel 5 )

HSP 1 Score: 75.5 bits (184), Expect = 5.4e-14
Identity = 49/162 (30.25%), Postives = 82/162 (50.62%), Query Frame = 0


Query: 40  KNATIGARSVTDFILLLEVAYKVCSSSILDLCPNSKTNAAPLTFFGR------LADVSKR 99
           +   I A ++  FI +  +A+         + P+S+        FGR       A ++KR
Sbjct: 134 RKLAITASTLRTFIDVFYLAHMALQLRTAYIAPSSRV-------FGRGELVIDPAQIAKR 193

Query: 100 VPWMDVLVDFLAMLPLPQIILVGVFPSRKGIKYFKNKWRLIFLPLFQFVPRIIRIYLLCK 159
                 ++DFL++LPLPQI++     S  G      K  L+F+ L Q++PR +R+  L  
Sbjct: 194 YLQRWFIIDFLSVLPLPQIVVWRFLQSSNGSDVLATKQALLFIVLVQYIPRFLRVLPLTS 253

Query: 160 KLSRSAAPNVITKTGQFRGTFNFVLFILASHVVGAFWYCFSV 196
           +L R+A   V  +T      +  +L++LASH+VGAFWY  ++
Sbjct: 254 ELKRTA--GVFAETAWAGAAYYLLLYMLASHIVGAFWYLLAL 286

The following BLAST results are available for this feature:

BLAST of CsGy3G024785 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65717	3.0e-17	33.53	Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana OX=3702 GN=CNGC1 P...	[more]
Q8L7Z0	4.5e-13	33.55	Cyclic nucleotide-gated ion channel 17 OS=Arabidopsis thaliana OX=3702 GN=CNGC17...	[more]
Q8RWS9	7.6e-13	30.25	Probable cyclic nucleotide-gated ion channel 5 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9SL29	1.1e-11	29.82	Putative cyclic nucleotide-gated ion channel 15 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LNJ0	3.2e-11	30.25	Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CsGy3G024785 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650810.1	1.35e-134	100.00	hypothetical protein Csa_017627 [Cucumis sativus]	[more]
XP_011651603.1	3.20e-87	84.15	cyclic nucleotide-gated ion channel 1 isoform X1 [Cucumis sativus] >KAE8650813.1...	[more]
XP_016900693.1	1.49e-83	83.23	PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X2 [Cucumis melo] ...	[more]
XP_008449547.1	1.65e-83	83.23	PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo]	[more]
KAA0061693.1	1.69e-83	83.23	cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of CsGy3G024785 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8V1	2.22e-90	84.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G606620 PE=4 SV=1	[more]
A0A5D3DCD7	7.19e-84	83.23	Cyclic nucleotide-gated ion channel 1-like isoform X2 OS=Cucumis melo var. makuw...	[more]
A0A1S4DXJ0	7.19e-84	83.23	cyclic nucleotide-gated ion channel 1-like isoform X2 OS=Cucumis melo OX=3656 GN...	[more]
A0A1S3BLM4	7.97e-84	83.23	cyclic nucleotide-gated ion channel 1-like isoform X1 OS=Cucumis melo OX=3656 GN...	[more]
A0A5A7V0L3	8.17e-84	83.23	Cyclic nucleotide-gated ion channel 1-like isoform X1 OS=Cucumis melo var. makuw...	[more]

BLAST of CsGy3G024785 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53130.1	2.1e-18	33.53	cyclic nucleotide gated channel 1	[more]
AT4G30360.1	3.2e-14	33.55	cyclic nucleotide-gated channel 17	[more]
AT5G57940.1	5.4e-14	30.25	cyclic nucleotide gated channel 5	[more]
AT5G57940.3	5.4e-14	30.25	cyclic nucleotide gated channel 5	[more]
AT5G57940.2	5.4e-14	30.25	cyclic nucleotide gated channel 5	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR45651	CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED	coord: 34..195
None	No IPR available	PANTHER	PTHR45651:SF65	CYCLIC NUCLEOTIDE-GATED ION CHANNEL 1-LIKE	coord: 34..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G024785.1	CsGy3G024785.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034220	ion transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005216	ion channel activity