|
|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGAGAAAGTCGCGATTTCTTCGACGACGGAGCAAAAAACATCGATGGCTGCTCCGGCGACGATTGGTGGAGCCCGCCCCTGACTGTGATAGATTGGATACAATGAAATTGATAGGACAAATGGTATATTTTGTTGAGGGATGGTTCTTAAAAGTTTTAGGGTTAAAAATCTGTTCAATTATTACTAACCCTTATCCCAATTTGTCCATTAGTTTGAAAAAAAAGCTTCACGATCTTCACAATTAATTGTATGTGATGAAATGAACGGCTAATATGCTGAACACATCGATGAATAGTATTTGTTTCAATTTTTATTTTTAGCTACGAAAATGTAAATAGGAGTTACATTTATTAATGGATTTAGGAATCTCATTCCCAGATAACTTGAACAGCTCGACGAAATAGCTATGAAATTGTTTACTGACGCAAAAATTCTGTCGTATGTAGGTAGGCATTATTTTATATAAAAGCCGAGAGCTCACCATGTGGACAGAAATGAAGTTTGTTCAACTTTTTGTTTCCTCTCAATTACTGTGAGAACCTCCATAATATCCATTTTTTTTTATTTGATTCCTATTCGTTTTCGAACAGAAAGAGCAAGATTTGATCTCTTCTTTTTTGGATCCAGATGCAAACAATTTTTTCTGTAAGTTCTTTTAAGCTTTCACTAAGGAGGTTACAAAAGTTGATTCGTCTTTATAGTTTTTGATGATCTGTTTTCAATGGTAGTGTATCAATTTGCAGTCCATTTTTACACACTTTCCTCTTTTGATGTTGGGGCCCTCTTAATCTTTTGTCTTTTAAACTTGAATTTGTTAAACTTCTCAATCTGGGATGTATTTGTATTGGTTGTATTGGAGGTTTTGAAGTTCCATTTTTAAGCCATGAGAGCTTAGAGCCGCCCTTTCCTGAAGTATTTGAAAAACCCGCATTTACTTTTTGTAATTTAATCTAATTTTGCTACCTTTAATTTGGTTCCCATCTCTTATTCTTATTGGTCAATGAATTTCGTATTTCCACTATTATTCTTTGAAGATTTGGGTTCTTAATTCCATGGCAATGGCTACTTAGAAACTAATGTCACTACCCAAATACGATCCAGTTGGTAATCTGTTTTAGAAGTGGGTGAAAAAGCAGAGTGTCTAGTACTGTTGGATACCATGCTCTTTTCTATACAATTGTATGAGTCCTACTTCTAAAAGTTCTAGCTATTAGATTAATATTCATTCCCAATATATTGCTTGAACTTTTTCTAAATTAATGTTACATGGCAAGTGGACTTCTTATCTTCAAAGTTAAAATATAGAAGAAATGGGTACAAGTTGGCTCAATCAACATTTATCTCTTAGAGTTTAGCTTTTAGAAAGTTAGATGGTTCATATATAAATTCTTCACTGATGGTTTATGTTCAGAAATTTTGTCATCGTTTCAAGCTAAATAGCAGGTTCCTTGTAGTACTGTTTTTTTTCCCTTGTCTCCCTTATCCTTGCATTCTATCATTTTGGTTATAGTTTATTTTTGTTCATATGACTCTGTTTAAGTTATTTAAACTAATTTTTCTTCTCAGCTTGGCTTGGATGA mRNA sequence ATGAGAAAGTCGCGATTTCTTCGACGACGGAGCAAAAAACATCGATGGCTGCTCCGGCGACGATTGGTGGAGCCCGCCCCTGACTGTGATAGATTGGATACAATGAAATTGATAGGACAAATGCTCGACGAAATAGCTATGAAATTGTTTACTGACGCAAAAATTCTGTCGTATAAAGAGCAAGATTTGATCTCTTCTTTTTTGGATCCAGATGCAAACAATTTTTTCTCTTGGCTTGGATGA Coding sequence (CDS) ATGAGAAAGTCGCGATTTCTTCGACGACGGAGCAAAAAACATCGATGGCTGCTCCGGCGACGATTGGTGGAGCCCGCCCCTGACTGTGATAGATTGGATACAATGAAATTGATAGGACAAATGCTCGACGAAATAGCTATGAAATTGTTTACTGACGCAAAAATTCTGTCGTATAAAGAGCAAGATTTGATCTCTTCTTTTTTGGATCCAGATGCAAACAATTTTTTCTCTTGGCTTGGATGA Protein sequence MRKSRFLRRRSKKHRWLLRRRLVEPAPDCDRLDTMKLIGQMLDEIAMKLFTDAKILSYKEQDLISSFLDPDANNFFSWLG*
Homology
BLAST of CsGy3G017165 vs. NCBI nr
Match: KGN57394.1 (hypothetical protein Csa_010610 [Cucumis sativus]) HSP 1 Score: 115 bits (289), Expect = 1.03e-31 Identity = 65/84 (77.38%), Postives = 68/84 (80.95%), Query Frame = 0
Query: 1 MRKSRFLRRRSKKHRWLLRRRLVEPAPDCDRLDTMKLIGQMLDEIAMKLFTDAKILSYKE 60
MRKSRFLRRRSKKHRWLLRRRLVEPAPDCDRLDTMKLIGQMLDEIAMKLFTDAKILSY E
Sbjct: 1 MRKSRFLRRRSKKHRWLLRRRLVEPAPDCDRLDTMKLIGQMLDEIAMKLFTDAKILSYVE 60
Query: 61 Q---DLISSFLDPDANNFF--SWL 79
+ DL F FF +W+
Sbjct: 61 RARFDLF--FFGSRCKQFFLLAWM 82
BLAST of CsGy3G017165 vs. ExPASy TrEMBL
Match: A0A0A0L8R6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182790 PE=4 SV=1) HSP 1 Score: 115 bits (289), Expect = 5.00e-32 Identity = 65/84 (77.38%), Postives = 68/84 (80.95%), Query Frame = 0
Query: 1 MRKSRFLRRRSKKHRWLLRRRLVEPAPDCDRLDTMKLIGQMLDEIAMKLFTDAKILSYKE 60
MRKSRFLRRRSKKHRWLLRRRLVEPAPDCDRLDTMKLIGQMLDEIAMKLFTDAKILSY E
Sbjct: 1 MRKSRFLRRRSKKHRWLLRRRLVEPAPDCDRLDTMKLIGQMLDEIAMKLFTDAKILSYVE 60
Query: 61 Q---DLISSFLDPDANNFF--SWL 79
+ DL F FF +W+
Sbjct: 61 RARFDLF--FFGSRCKQFFLLAWM 82
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KGN57394.1 | 1.03e-31 | 77.38 | hypothetical protein Csa_010610 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0L8R6 | 5.00e-32 | 77.38 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182790 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
|
