CsGy3G017165 (gene) Cucumber (Gy14) v2.1

Overview
NameCsGy3G017165
Typegene
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionUnknown protein
LocationGy14Chr3: 13193221 .. 13194801 (-)
RNA-Seq ExpressionCsGy3G017165
SyntenyCsGy3G017165
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAAAGTCGCGATTTCTTCGACGACGGAGCAAAAAACATCGATGGCTGCTCCGGCGACGATTGGTGGAGCCCGCCCCTGACTGTGATAGATTGGATACAATGAAATTGATAGGACAAATGGTATATTTTGTTGAGGGATGGTTCTTAAAAGTTTTAGGGTTAAAAATCTGTTCAATTATTACTAACCCTTATCCCAATTTGTCCATTAGTTTGAAAAAAAAGCTTCACGATCTTCACAATTAATTGTATGTGATGAAATGAACGGCTAATATGCTGAACACATCGATGAATAGTATTTGTTTCAATTTTTATTTTTAGCTACGAAAATGTAAATAGGAGTTACATTTATTAATGGATTTAGGAATCTCATTCCCAGATAACTTGAACAGCTCGACGAAATAGCTATGAAATTGTTTACTGACGCAAAAATTCTGTCGTATGTAGGTAGGCATTATTTTATATAAAAGCCGAGAGCTCACCATGTGGACAGAAATGAAGTTTGTTCAACTTTTTGTTTCCTCTCAATTACTGTGAGAACCTCCATAATATCCATTTTTTTTTATTTGATTCCTATTCGTTTTCGAACAGAAAGAGCAAGATTTGATCTCTTCTTTTTTGGATCCAGATGCAAACAATTTTTTCTGTAAGTTCTTTTAAGCTTTCACTAAGGAGGTTACAAAAGTTGATTCGTCTTTATAGTTTTTGATGATCTGTTTTCAATGGTAGTGTATCAATTTGCAGTCCATTTTTACACACTTTCCTCTTTTGATGTTGGGGCCCTCTTAATCTTTTGTCTTTTAAACTTGAATTTGTTAAACTTCTCAATCTGGGATGTATTTGTATTGGTTGTATTGGAGGTTTTGAAGTTCCATTTTTAAGCCATGAGAGCTTAGAGCCGCCCTTTCCTGAAGTATTTGAAAAACCCGCATTTACTTTTTGTAATTTAATCTAATTTTGCTACCTTTAATTTGGTTCCCATCTCTTATTCTTATTGGTCAATGAATTTCGTATTTCCACTATTATTCTTTGAAGATTTGGGTTCTTAATTCCATGGCAATGGCTACTTAGAAACTAATGTCACTACCCAAATACGATCCAGTTGGTAATCTGTTTTAGAAGTGGGTGAAAAAGCAGAGTGTCTAGTACTGTTGGATACCATGCTCTTTTCTATACAATTGTATGAGTCCTACTTCTAAAAGTTCTAGCTATTAGATTAATATTCATTCCCAATATATTGCTTGAACTTTTTCTAAATTAATGTTACATGGCAAGTGGACTTCTTATCTTCAAAGTTAAAATATAGAAGAAATGGGTACAAGTTGGCTCAATCAACATTTATCTCTTAGAGTTTAGCTTTTAGAAAGTTAGATGGTTCATATATAAATTCTTCACTGATGGTTTATGTTCAGAAATTTTGTCATCGTTTCAAGCTAAATAGCAGGTTCCTTGTAGTACTGTTTTTTTTCCCTTGTCTCCCTTATCCTTGCATTCTATCATTTTGGTTATAGTTTATTTTTGTTCATATGACTCTGTTTAAGTTATTTAAACTAATTTTTCTTCTCAGCTTGGCTTGGATGA

mRNA sequence

ATGAGAAAGTCGCGATTTCTTCGACGACGGAGCAAAAAACATCGATGGCTGCTCCGGCGACGATTGGTGGAGCCCGCCCCTGACTGTGATAGATTGGATACAATGAAATTGATAGGACAAATGCTCGACGAAATAGCTATGAAATTGTTTACTGACGCAAAAATTCTGTCGTATAAAGAGCAAGATTTGATCTCTTCTTTTTTGGATCCAGATGCAAACAATTTTTTCTCTTGGCTTGGATGA

Coding sequence (CDS)

ATGAGAAAGTCGCGATTTCTTCGACGACGGAGCAAAAAACATCGATGGCTGCTCCGGCGACGATTGGTGGAGCCCGCCCCTGACTGTGATAGATTGGATACAATGAAATTGATAGGACAAATGCTCGACGAAATAGCTATGAAATTGTTTACTGACGCAAAAATTCTGTCGTATAAAGAGCAAGATTTGATCTCTTCTTTTTTGGATCCAGATGCAAACAATTTTTTCTCTTGGCTTGGATGA

Protein sequence

MRKSRFLRRRSKKHRWLLRRRLVEPAPDCDRLDTMKLIGQMLDEIAMKLFTDAKILSYKEQDLISSFLDPDANNFFSWLG*
Homology
[Close]
BLAST of CsGy3G017165 vs. NCBI nr
Match: KGN57394.1 (hypothetical protein Csa_010610 [Cucumis sativus])

HSP 1 Score: 115 bits (289), Expect = 1.03e-31
Identity = 65/84 (77.38%), Postives = 68/84 (80.95%), Query Frame = 0 

Query: 1  MRKSRFLRRRSKKHRWLLRRRLVEPAPDCDRLDTMKLIGQMLDEIAMKLFTDAKILSYKE 60
          MRKSRFLRRRSKKHRWLLRRRLVEPAPDCDRLDTMKLIGQMLDEIAMKLFTDAKILSY E
Sbjct: 1  MRKSRFLRRRSKKHRWLLRRRLVEPAPDCDRLDTMKLIGQMLDEIAMKLFTDAKILSYVE 60

Query: 61 Q---DLISSFLDPDANNFF--SWL 79
          +   DL   F       FF  +W+
Sbjct: 61 RARFDLF--FFGSRCKQFFLLAWM 82

[Close]
BLAST of CsGy3G017165 vs. ExPASy TrEMBL
Match: A0A0A0L8R6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182790 PE=4 SV=1)

HSP 1 Score: 115 bits (289), Expect = 5.00e-32
Identity = 65/84 (77.38%), Postives = 68/84 (80.95%), Query Frame = 0 

Query: 1  MRKSRFLRRRSKKHRWLLRRRLVEPAPDCDRLDTMKLIGQMLDEIAMKLFTDAKILSYKE 60
          MRKSRFLRRRSKKHRWLLRRRLVEPAPDCDRLDTMKLIGQMLDEIAMKLFTDAKILSY E
Sbjct: 1  MRKSRFLRRRSKKHRWLLRRRLVEPAPDCDRLDTMKLIGQMLDEIAMKLFTDAKILSYVE 60

Query: 61 Q---DLISSFLDPDANNFF--SWL 79
          +   DL   F       FF  +W+
Sbjct: 61 RARFDLF--FFGSRCKQFFLLAWM 82

The following BLAST results are available for this feature:
BLAST of CsGy3G017165 vs.
Match NameE-valueIdentityDescription
BLAST of CsGy3G017165 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57394.11.03e-3177.38hypothetical protein Csa_010610 [Cucumis sativus][more]
BLAST of CsGy3G017165 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8R65.00e-3277.38Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182790 PE=4 SV=1[more]
BLAST of CsGy3G017165 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G017165.1CsGy3G017165.1mRNA