CsGy3G012420 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy3G012420
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	C2H2-type domain-containing protein
Location	Gy14Chr3: 9373956 .. 9375024 (-)
RNA-Seq Expression	CsGy3G012420
Synteny	CsGy3G012420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAACCCCATTACTCTCTCTTCCCTAAAATAAACCTCTCATAAACCTAAACACATGAAGGACATTTTCAGGGCCTTCTCCCTTTTTCTCTTGCTCTCTTTCATCTTTCTTAAACATTATTTCACTCTTCTCCATATAGACAATATAACTAATTAAATCTATTTCTTCAACTACTCCTTTTTTCCCACTTTCTATCTCTCATTGTCAACACTACGAGCTATCACTTTGAATCTTTTCTTTTCTTTTTTGTTACTTTTTCTAAAGCCTCATCCATGGAGAAGAACTGTTTACGCACTGTGTATCGTACAAGTTTAACAACAATGAACACGTCGACGATTGGTGGAGGAGCCAACCCCAGCGTGAAAAGCCAGAGGAACAAGGTGTGTCGGGCAGCAACCGAGGAAGATTTCATAAATGGGATTTCATGGCCTCCAAGGAGTTACACTTGCAACTTTTGCAAAAGGGAATTTAGATCAGCTCAAGCTCTTGGTGGTCATATGAATGTTCATAGGAGAGATAGAGCTTTGCTTTATTCTCCTCCAGCTGATGGTCAGTTCACTAATCTCAACCTTAACCTCCTCCATAACCCTAACCCTAATATCTCGTCTTACGACGAAGTCACATTCGTCGGTCGAAAAGCTTCGGATTTGAAGTTGTCATCCATGACAACTGAAATTGCGACGAAACCTAATATGTTTGAGAGAGGTCATTGGAAGAAGGGTGAGAAATTCAATATTGGGTTGGATATTGAAATTAGTACTACTTCTTCGACCAATGTACTTACTGACTCCAAGAAGGATATTGATTTGGAGCTTCGATTAGGGTACTCAACTTAGAGATCAAGATGTGGGATTTTTCGGTGATTATATTTGACCTTGTAACATGTTCTTCAAAAATTTTATTCACCGTCATCTGTTATATTTTTGTAGTGTTTTAAACCCCAAGCTTAAGACATTATTGTTTCTATCTTTCACTATTTGTATGTTTTAATTTCATTGGTAAGTTTATCTTCTTTTTTCTGTCTGATTTGGAAAAGGATTTAATTTCTTTCCTAACCAAACTTGTG

mRNA sequence

ATGGCAAACCCCATTACTCTCTCTTCCCTAAAATAAACCTCTCATAAACCTAAACACATGAAGGACATTTTCAGGGCCTTCTCCCTTTTTCTCTTGCTCTCTTTCATCTTTCTTAAACATTATTTCACTCTTCTCCATATAGACAATATAACTAATTAAATCTATTTCTTCAACTACTCCTTTTTTCCCACTTTCTATCTCTCATTGTCAACACTACGAGCTATCACTTTGAATCTTTTCTTTTCTTTTTTGTTACTTTTTCTAAAGCCTCATCCATGGAGAAGAACTGTTTACGCACTGTGTATCGTACAAGTTTAACAACAATGAACACGTCGACGATTGGTGGAGGAGCCAACCCCAGCGTGAAAAGCCAGAGGAACAAGGTGTGTCGGGCAGCAACCGAGGAAGATTTCATAAATGGGATTTCATGGCCTCCAAGGAGTTACACTTGCAACTTTTGCAAAAGGGAATTTAGATCAGCTCAAGCTCTTGGTGGTCATATGAATGTTCATAGGAGAGATAGAGCTTTGCTTTATTCTCCTCCAGCTGATGGTCAGTTCACTAATCTCAACCTTAACCTCCTCCATAACCCTAACCCTAATATCTCGTCTTACGACGAAGTCACATTCGTCGGTCGAAAAGCTTCGGATTTGAAGTTGTCATCCATGACAACTGAAATTGCGACGAAACCTAATATGTTTGAGAGAGGTCATTGGAAGAAGGGTGAGAAATTCAATATTGGGTTGGATATTGAAATTAGTACTACTTCTTCGACCAATGTACTTACTGACTCCAAGAAGGATATTGATTTGGAGCTTCGATTAGGGTACTCAACTTAGAGATCAAGATGTGGGATTTTTCGGTGATTATATTTGACCTTGTAACATGTTCTTCAAAAATTTTATTCACCGTCATCTGTTATATTTTTGTAGTGTTTTAAACCCCAAGCTTAAGACATTATTGTTTCTATCTTTCACTATTTGTATGTTTTAATTTCATTGGTAAGTTTATCTTCTTTTTTCTGTCTGATTTGGAAAAGGATTTAATTTCTTTCCTAACCAAACTTGTG

Coding sequence (CDS)

ATGGAGAAGAACTGTTTACGCACTGTGTATCGTACAAGTTTAACAACAATGAACACGTCGACGATTGGTGGAGGAGCCAACCCCAGCGTGAAAAGCCAGAGGAACAAGGTGTGTCGGGCAGCAACCGAGGAAGATTTCATAAATGGGATTTCATGGCCTCCAAGGAGTTACACTTGCAACTTTTGCAAAAGGGAATTTAGATCAGCTCAAGCTCTTGGTGGTCATATGAATGTTCATAGGAGAGATAGAGCTTTGCTTTATTCTCCTCCAGCTGATGGTCAGTTCACTAATCTCAACCTTAACCTCCTCCATAACCCTAACCCTAATATCTCGTCTTACGACGAAGTCACATTCGTCGGTCGAAAAGCTTCGGATTTGAAGTTGTCATCCATGACAACTGAAATTGCGACGAAACCTAATATGTTTGAGAGAGGTCATTGGAAGAAGGGTGAGAAATTCAATATTGGGTTGGATATTGAAATTAGTACTACTTCTTCGACCAATGTACTTACTGACTCCAAGAAGGATATTGATTTGGAGCTTCGATTAGGGTACTCAACTTAG

Protein sequence

MEKNCLRTVYRTSLTTMNTSTIGGGANPSVKSQRNKVCRAATEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADGQFTNLNLNLLHNPNPNISSYDEVTFVGRKASDLKLSSMTTEIATKPNMFERGHWKKGEKFNIGLDIEISTTSSTNVLTDSKKDIDLELRLGYST*

Homology

[Close]

BLAST of CsGy3G012420 vs. ExPASy Swiss-Prot
Match: Q38895 (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.8e-17
Identity = 59/172 (34.30%), Postives = 87/172 (50.58%), Query Frame = 0


Query: 43  EEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRA---LLYSPPADG----QF 102
           + D++ G SWPPRSYTC+FCKREFRSAQALGGHMNVHRRDRA   L  SP +       +
Sbjct: 33  DHDYLLGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPSPPY 92

Query: 103 TNLNLN---LLHNPNPNISSYDEVTFVGRKASDLKLSSMTTEIATKPNMFERGHWK---- 162
            N N +   + ++P P+ S       +   +S    + +   ++ K         K    
Sbjct: 93  PNPNYSYSTMANSPPPHHSPLTLFPTLSPPSSPRYRAGLIRSLSPKSKHTPENACKTKKS 152

Query: 163 -------KGEKFN-------IGLDIEISTTSSTNVLTDSKKDIDLELRLGYS 187
                  +  +F        +  D  IS      ++ +S++D+DLELRLG++
Sbjct: 153 SLLVEAGEATRFTSKDACKILRNDEIISLELEIGLINESEQDLDLELRLGFA 204

[Close]

BLAST of CsGy3G012420 vs. ExPASy Swiss-Prot
Match: O80942 (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.9e-17
Identity = 63/154 (40.91%), Postives = 78/154 (50.65%), Query Frame = 0


Query: 23  GGGANPSVKSQRNKVCRAATEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRD 82
           GG   P   ++ +     A  ED   G  WPPRSYTC+FC+REF+SAQALGGHMNVHRRD
Sbjct: 5   GGFWIPKKSNKESSWEELAFAEDDAAGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRD 64

Query: 83  RALLYSPPADGQFTNLNLNLLHNPNPNISSYDEVTFVGRKASD--LKLSSMTTEIATKPN 142
           RA L    AD Q+            P  SS  E  +   K SD   + S  T    TKPN
Sbjct: 65  RARL--KQADDQYL----------FPKSSSSPE--YPSHKDSDNIHETSCYTLVFNTKPN 124

Query: 143 MFERGHWKKGEKFNIGLDIEISTTSSTNVLTDSK 175
            F+  H            I++S++SS   LT S+
Sbjct: 125 YFKTQH---------SCVIDLSSSSSLPYLTPSR 135

[Close]

BLAST of CsGy3G012420 vs. ExPASy Swiss-Prot
Match: Q9SLB8 (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.2e-15
Identity = 54/128 (42.19%), Postives = 71/128 (55.47%), Query Frame = 0


Query: 50  ISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADGQFTNLNLNLLHNPNPN 109
           I WPP++YTC+FC+REFRSAQALGGHMNVHRRDRA L   P+   F   +   + NPNPN
Sbjct: 42  IPWPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPS-WLFEPHHHTPIANPNPN 101

Query: 110 ISSYDEVTFVGRKASDLKLSSMTTEIATKPNMFERGHWKKGEKF-NIGLDIEISTTSSTN 169
            SS                SS TT    +P++  +    K   F +   D+  STTS   
Sbjct: 102 FSS--------------SSSSSTTTAHLEPSLTNQR--SKTTPFPSARFDLLDSTTSYGG 152

Query: 170 VLTDSKKD 177
           ++ D +K+
Sbjct: 162 LMMDREKN 152

[Close]

BLAST of CsGy3G012420 vs. ExPASy Swiss-Prot
Match: Q9LHS9 (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2)

HSP 1 Score: 77.8 bits (190), Expect = 1.5e-13
Identity = 53/131 (40.46%), Postives = 60/131 (45.80%), Query Frame = 0


Query: 49  GISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALL----YSPPADGQFTNLNLNLLH 108
           G  WPPRSY+C+FC REF+SAQALGGHMNVHRRDRA L     SP +  Q T        
Sbjct: 47  GCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLSPSSTDQAT-------- 106

Query: 109 NPNPNISSYDEVTFVGRKASDLKLSSMTTEIATKPNMFERGHWKKGEKFNIGLDIEISTT 168
              P      +V  VG K        +  E   KPN               G   EIS  
Sbjct: 107 --PPECDRQQQVLDVGSKV-------LVQEETRKPN---------------GTKREISDV 145

Query: 169 SSTNVLTDSKK 176
            + NVL  S K
Sbjct: 167 CNNNVLESSMK 145

[Close]

BLAST of CsGy3G012420 vs. ExPASy Swiss-Prot
Match: Q9SR34 (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 4.6e-07
Identity = 24/32 (75.00%), Postives = 27/32 (84.38%), Query Frame = 0


Query: 55 RSYTCNFCKREFRSAQALGGHMNVHRRDRALL 87
          RSY C+FC R F +AQALGGHMN+HRRDRA L
Sbjct: 33 RSYVCSFCIRGFSNAQALGGHMNIHRRDRAKL 64

[Close]

BLAST of CsGy3G012420 vs. NCBI nr
Match: XP_004134421.1 (transcriptional regulator SUPERMAN [Cucumis sativus])

HSP 1 Score: 382 bits (982), Expect = 5.15e-134
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MEKNCLRTVYRTSLTTMNTSTIGGGANPSVKSQRNKVCRAATEEDFINGISWPPRSYTCN 60
           MEKNCLRTVYRTSLTTMNTSTIGGGANPSVKSQRNKVCRAATEEDFINGISWPPRSYTCN
Sbjct: 1   MEKNCLRTVYRTSLTTMNTSTIGGGANPSVKSQRNKVCRAATEEDFINGISWPPRSYTCN 60

Query: 61  FCKREFRSAQALGGHMNVHRRDRALLYSPPADGQFTNLNLNLLHNPNPNISSYDEVTFVG 120
           FCKREFRSAQALGGHMNVHRRDRALLYSPPADGQFTNLNLNLLHNPNPNISSYDEVTFVG
Sbjct: 61  FCKREFRSAQALGGHMNVHRRDRALLYSPPADGQFTNLNLNLLHNPNPNISSYDEVTFVG 120

Query: 121 RKASDLKLSSMTTEIATKPNMFERGHWKKGEKFNIGLDIEISTTSSTNVLTDSKKDIDLE 180
           RKASDLKLSSMTTEIATKPNMFERGHWKKGEKFNIGLDIEISTTSSTNVLTDSKKDIDLE
Sbjct: 121 RKASDLKLSSMTTEIATKPNMFERGHWKKGEKFNIGLDIEISTTSSTNVLTDSKKDIDLE 180

Query: 181 LRLGYST 187
           LRLGYST
Sbjct: 181 LRLGYST 187

[Close]

BLAST of CsGy3G012420 vs. NCBI nr
Match: KAE8650336.1 (hypothetical protein Csa_011537 [Cucumis sativus])

HSP 1 Score: 376 bits (965), Expect = 3.96e-131
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MEKNCLRTVYRTSLTTMNTSTIGGGANPSVKSQRNKVCRAATEEDFINGISWPPRSYTCN 60
           MEKNCLRTVYRTSLTTMNTSTIGGGANPSVKSQRNKVCRAATEEDFINGISWPPRSYTCN
Sbjct: 1   MEKNCLRTVYRTSLTTMNTSTIGGGANPSVKSQRNKVCRAATEEDFINGISWPPRSYTCN 60

Query: 61  FCKREFRSAQALGGHMNVHRRDRALLYSPPADGQFTNLNLNLLHNPNPNISSYDEVTFVG 120
           FCKREFRSAQALGGHMNVHRRDRALLYSPPADGQFTNLNLNLLHNPNPNISSYDEVTFVG
Sbjct: 61  FCKREFRSAQALGGHMNVHRRDRALLYSPPADGQFTNLNLNLLHNPNPNISSYDEVTFVG 120

Query: 121 RKASDLKLSSMTTEIATKPNMFERGHWKKGEKFNIGLDIEISTTSSTNVLTDSKKDIDLE 180
           RKASDLKLSSMTTEIATKPNMFERGHWKKGEKFNIGLDIEISTTSSTNVLTDSKKDIDLE
Sbjct: 121 RKASDLKLSSMTTEIATKPNMFERGHWKKGEKFNIGLDIEISTTSSTNVLTDSKKDIDLE 180

Query: 181 LRLG 184
           LRLG
Sbjct: 181 LRLG 184

[Close]

BLAST of CsGy3G012420 vs. NCBI nr
Match: XP_008438560.1 (PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo])

HSP 1 Score: 368 bits (944), Expect = 3.45e-128
Identity = 182/189 (96.30%), Postives = 183/189 (96.83%), Query Frame = 0


Query: 1   MEKNCLRTVYRTSLTTMNTSTIGGGANPSVKSQRNKVCRAATEEDFINGISWPPRSYTCN 60
           MEKNCLRTVYRTSLT+MNTSTIGGGANPSVKSQRNKVCRAATEEDFINGISWPPRSYTCN
Sbjct: 1   MEKNCLRTVYRTSLTSMNTSTIGGGANPSVKSQRNKVCRAATEEDFINGISWPPRSYTCN 60

Query: 61  FCKREFRSAQALGGHMNVHRRDRALLYSPPADGQFTNLNLNLLHNPNPN--ISSYDEVTF 120
           FCKREFRSAQALGGHMNVHRRDRALLYSPPADGQFTNLNLNLLHNPNPN  ISSYDEVTF
Sbjct: 61  FCKREFRSAQALGGHMNVHRRDRALLYSPPADGQFTNLNLNLLHNPNPNPNISSYDEVTF 120

Query: 121 VGRKASDLKLSSMTTEIATKPNMFERGHWKKGEKFNIGLDIEISTTSSTNVLTDSKKDID 180
           VGRKASDLKLSSMT EIA KPNMFERGHWKKGEKFNIGLDIEISTTSSTNVL DSK DID
Sbjct: 121 VGRKASDLKLSSMTAEIAAKPNMFERGHWKKGEKFNIGLDIEISTTSSTNVLNDSKMDID 180

Query: 181 LELRLGYST 187
           LELRLGYST
Sbjct: 181 LELRLGYST 189

[Close]

BLAST of CsGy3G012420 vs. NCBI nr
Match: KAA0049282.1 (transcriptional regulator SUPERMAN-like [Cucumis melo var. makuwa] >TYK17275.1 transcriptional regulator SUPERMAN-like [Cucumis melo var. makuwa])

HSP 1 Score: 338 bits (867), Expect = 1.08e-116
Identity = 167/173 (96.53%), Postives = 167/173 (96.53%), Query Frame = 0


Query: 17  MNTSTIGGGANPSVKSQRNKVCRAATEEDFINGISWPPRSYTCNFCKREFRSAQALGGHM 76
           MNTSTIGGGANPSVKSQRNKVCRAATEEDFINGISWPPRSYTCNFCKREFRSAQALGGHM
Sbjct: 1   MNTSTIGGGANPSVKSQRNKVCRAATEEDFINGISWPPRSYTCNFCKREFRSAQALGGHM 60

Query: 77  NVHRRDRALLYSPPADGQFTNLNLNLLHNPNPN--ISSYDEVTFVGRKASDLKLSSMTTE 136
           NVHRRDRALLYSPPADGQFTNLNLNLLHNPNPN  ISSYDEVTFVGRKASDLKLSSMT E
Sbjct: 61  NVHRRDRALLYSPPADGQFTNLNLNLLHNPNPNPNISSYDEVTFVGRKASDLKLSSMTAE 120

Query: 137 IATKPNMFERGHWKKGEKFNIGLDIEISTTSSTNVLTDSKKDIDLELRLGYST 187
           IA KPNMFERGHWKKGEKFNIGLDIEISTTSSTNVL DSK DIDLELRLGYST
Sbjct: 121 IAAKPNMFERGHWKKGEKFNIGLDIEISTTSSTNVLNDSKMDIDLELRLGYST 173

[Close]

BLAST of CsGy3G012420 vs. NCBI nr
Match: XP_038877188.1 (transcriptional regulator SUPERMAN-like [Benincasa hispida])

HSP 1 Score: 315 bits (806), Expect = 3.38e-107
Identity = 164/190 (86.32%), Postives = 171/190 (90.00%), Query Frame = 0


Query: 1   MEKNCLRTVYRTSLTTMNTSTIGGGANPS---VKSQRNKVCRAATEEDFINGISWPPRSY 60
           ME+NCLRTVYRTSLTTMNT TIGGGANP+   VKSQRNK+CRAA EEDFINGISWPPRSY
Sbjct: 1   MERNCLRTVYRTSLTTMNT-TIGGGANPANAAVKSQRNKLCRAA-EEDFINGISWPPRSY 60

Query: 61  TCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADGQFTNLNLNLLHNPNPNISSYDEVT 120
            CNFCKREFRSAQALGGHMNVHRRDRALLYSPPADGQFTNLNLNL HNPNPNI S+D+V 
Sbjct: 61  ACNFCKREFRSAQALGGHMNVHRRDRALLYSPPADGQFTNLNLNLHHNPNPNIPSHDDVA 120

Query: 121 FVGRKASDLKLSSMTTEIATKPNMFERGHWKKGEKFNIGLDIEISTTSSTNVLTDSKKDI 180
           FVG+KASDLK  S T EIA K N+FE  HWKKGEKFNIGLDIEISTTS TNVLTDS KDI
Sbjct: 121 FVGQKASDLKSPSTTREIA-KRNIFETAHWKKGEKFNIGLDIEISTTS-TNVLTDSNKDI 180

Query: 181 DLELRLGYST 187
           DLELRLGYST
Sbjct: 181 DLELRLGYST 186

[Close]

BLAST of CsGy3G012420 vs. ExPASy TrEMBL
Match: A0A0A0L9Y8 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G141870 PE=4 SV=1)

HSP 1 Score: 382 bits (982), Expect = 2.49e-134
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MEKNCLRTVYRTSLTTMNTSTIGGGANPSVKSQRNKVCRAATEEDFINGISWPPRSYTCN 60
           MEKNCLRTVYRTSLTTMNTSTIGGGANPSVKSQRNKVCRAATEEDFINGISWPPRSYTCN
Sbjct: 1   MEKNCLRTVYRTSLTTMNTSTIGGGANPSVKSQRNKVCRAATEEDFINGISWPPRSYTCN 60

Query: 61  FCKREFRSAQALGGHMNVHRRDRALLYSPPADGQFTNLNLNLLHNPNPNISSYDEVTFVG 120
           FCKREFRSAQALGGHMNVHRRDRALLYSPPADGQFTNLNLNLLHNPNPNISSYDEVTFVG
Sbjct: 61  FCKREFRSAQALGGHMNVHRRDRALLYSPPADGQFTNLNLNLLHNPNPNISSYDEVTFVG 120

Query: 121 RKASDLKLSSMTTEIATKPNMFERGHWKKGEKFNIGLDIEISTTSSTNVLTDSKKDIDLE 180
           RKASDLKLSSMTTEIATKPNMFERGHWKKGEKFNIGLDIEISTTSSTNVLTDSKKDIDLE
Sbjct: 121 RKASDLKLSSMTTEIATKPNMFERGHWKKGEKFNIGLDIEISTTSSTNVLTDSKKDIDLE 180

Query: 181 LRLGYST 187
           LRLGYST
Sbjct: 181 LRLGYST 187

[Close]

BLAST of CsGy3G012420 vs. ExPASy TrEMBL
Match: A0A1S3AWP0 (transcriptional regulator SUPERMAN-like OS=Cucumis melo OX=3656 GN=LOC103483626 PE=4 SV=1)

HSP 1 Score: 368 bits (944), Expect = 1.67e-128
Identity = 182/189 (96.30%), Postives = 183/189 (96.83%), Query Frame = 0


Query: 1   MEKNCLRTVYRTSLTTMNTSTIGGGANPSVKSQRNKVCRAATEEDFINGISWPPRSYTCN 60
           MEKNCLRTVYRTSLT+MNTSTIGGGANPSVKSQRNKVCRAATEEDFINGISWPPRSYTCN
Sbjct: 1   MEKNCLRTVYRTSLTSMNTSTIGGGANPSVKSQRNKVCRAATEEDFINGISWPPRSYTCN 60

Query: 61  FCKREFRSAQALGGHMNVHRRDRALLYSPPADGQFTNLNLNLLHNPNPN--ISSYDEVTF 120
           FCKREFRSAQALGGHMNVHRRDRALLYSPPADGQFTNLNLNLLHNPNPN  ISSYDEVTF
Sbjct: 61  FCKREFRSAQALGGHMNVHRRDRALLYSPPADGQFTNLNLNLLHNPNPNPNISSYDEVTF 120

Query: 121 VGRKASDLKLSSMTTEIATKPNMFERGHWKKGEKFNIGLDIEISTTSSTNVLTDSKKDID 180
           VGRKASDLKLSSMT EIA KPNMFERGHWKKGEKFNIGLDIEISTTSSTNVL DSK DID
Sbjct: 121 VGRKASDLKLSSMTAEIAAKPNMFERGHWKKGEKFNIGLDIEISTTSSTNVLNDSKMDID 180

Query: 181 LELRLGYST 187
           LELRLGYST
Sbjct: 181 LELRLGYST 189

[Close]

BLAST of CsGy3G012420 vs. ExPASy TrEMBL
Match: A0A5A7U0H2 (Transcriptional regulator SUPERMAN-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001280 PE=4 SV=1)

HSP 1 Score: 338 bits (867), Expect = 5.23e-117
Identity = 167/173 (96.53%), Postives = 167/173 (96.53%), Query Frame = 0


Query: 17  MNTSTIGGGANPSVKSQRNKVCRAATEEDFINGISWPPRSYTCNFCKREFRSAQALGGHM 76
           MNTSTIGGGANPSVKSQRNKVCRAATEEDFINGISWPPRSYTCNFCKREFRSAQALGGHM
Sbjct: 1   MNTSTIGGGANPSVKSQRNKVCRAATEEDFINGISWPPRSYTCNFCKREFRSAQALGGHM 60

Query: 77  NVHRRDRALLYSPPADGQFTNLNLNLLHNPNPN--ISSYDEVTFVGRKASDLKLSSMTTE 136
           NVHRRDRALLYSPPADGQFTNLNLNLLHNPNPN  ISSYDEVTFVGRKASDLKLSSMT E
Sbjct: 61  NVHRRDRALLYSPPADGQFTNLNLNLLHNPNPNPNISSYDEVTFVGRKASDLKLSSMTAE 120

Query: 137 IATKPNMFERGHWKKGEKFNIGLDIEISTTSSTNVLTDSKKDIDLELRLGYST 187
           IA KPNMFERGHWKKGEKFNIGLDIEISTTSSTNVL DSK DIDLELRLGYST
Sbjct: 121 IAAKPNMFERGHWKKGEKFNIGLDIEISTTSSTNVLNDSKMDIDLELRLGYST 173

[Close]

BLAST of CsGy3G012420 vs. ExPASy TrEMBL
Match: A0A6J1IX36 (transcriptional regulator SUPERMAN-like OS=Cucurbita maxima OX=3661 GN=LOC111479290 PE=4 SV=1)

HSP 1 Score: 212 bits (540), Expect = 4.27e-67
Identity = 128/206 (62.14%), Postives = 138/206 (66.99%), Query Frame = 0


Query: 1   MEKNCLRTVYRTSLTTMNTSTIGGGA----------------NPSVKSQRNKVCRAAT-- 60
           ME+NCLRT  RTSL TMNT+  GG A                N +VKSQRNK CRAA   
Sbjct: 1   MERNCLRTACRTSLATMNTTISGGAAAAAAAAGGGGGGGGAANAAVKSQRNKACRAAAAA 60

Query: 61  EEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADG-QFTNLNLN 120
           EEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPAD   FTNLNLN
Sbjct: 61  EEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTNLNLN 120

Query: 121 LLHNPNPNISSYDEVTFVGRKASDLKLSSMTTEIATKPNMFERGHWKKGEKFNIGLDIEI 180
           L HNP PN           R    L+++        KPN        K  KF IGLDIEI
Sbjct: 121 LNHNPFPN-----------RPLKALEIA--------KPNR------NKAHKF-IGLDIEI 180

Query: 181 STTSST-NVLTDSKKDIDLELRLGYS 186
           STT++T  +LT+SKKDIDLELRLGYS
Sbjct: 181 STTTNTATLLTESKKDIDLELRLGYS 180

[Close]

BLAST of CsGy3G012420 vs. ExPASy TrEMBL
Match: A0A6J1E9R8 (zinc finger protein 11-like OS=Cucurbita moschata OX=3662 GN=LOC111432071 PE=4 SV=1)

HSP 1 Score: 211 bits (536), Expect = 1.57e-66
Identity = 129/204 (63.24%), Postives = 141/204 (69.12%), Query Frame = 0


Query: 1   MEKNCLRTVYRTSLTTMNTSTIGGGA------------NPSVKSQRNKVCRAAT--EEDF 60
           ME+NCLRT  RTSLTTMNT+  GGGA            N + KSQRNKVCRAA   EEDF
Sbjct: 1   MERNCLRTACRTSLTTMNTTISGGGAPAAAGGGGGGGPNGAGKSQRNKVCRAAAAAEEDF 60

Query: 61  INGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADG-QFTNLNLNLLHN 120
           INGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPAD   FTNLNLNL HN
Sbjct: 61  INGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADHTHFTNLNLNLHHN 120

Query: 121 PNPNISSYDEVTFVGRKASDLKLSSMTTEIATKPNMFERGHWKKGEKFNIGLDIEISTTS 180
           P PN           R    L+++        KPN        K  KF IGLDIEI+TT+
Sbjct: 121 PFPN-----------RPFKALEIA--------KPNR------NKPHKF-IGLDIEINTTN 178

Query: 181 ST-NVLTDSKK-DIDLELRLGYST 187
           +T  ++T+SKK DIDLELRLGYST
Sbjct: 181 NTATLITESKKKDIDLELRLGYST 178

[Close]

BLAST of CsGy3G012420 vs. TAIR 10
Match: AT3G23130.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 90.1 bits (222), Expect = 2.0e-18
Identity = 59/172 (34.30%), Postives = 87/172 (50.58%), Query Frame = 0


Query: 43  EEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRA---LLYSPPADG----QF 102
           + D++ G SWPPRSYTC+FCKREFRSAQALGGHMNVHRRDRA   L  SP +       +
Sbjct: 33  DHDYLLGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPSPPY 92

Query: 103 TNLNLN---LLHNPNPNISSYDEVTFVGRKASDLKLSSMTTEIATKPNMFERGHWK---- 162
            N N +   + ++P P+ S       +   +S    + +   ++ K         K    
Sbjct: 93  PNPNYSYSTMANSPPPHHSPLTLFPTLSPPSSPRYRAGLIRSLSPKSKHTPENACKTKKS 152

Query: 163 -------KGEKFN-------IGLDIEISTTSSTNVLTDSKKDIDLELRLGYS 187
                  +  +F        +  D  IS      ++ +S++D+DLELRLG++
Sbjct: 153 SLLVEAGEATRFTSKDACKILRNDEIISLELEIGLINESEQDLDLELRLGFA 204

[Close]

BLAST of CsGy3G012420 vs. TAIR 10
Match: AT2G37740.1 (zinc-finger protein 10 )

HSP 1 Score: 89.4 bits (220), Expect = 3.4e-18
Identity = 63/154 (40.91%), Postives = 78/154 (50.65%), Query Frame = 0


Query: 23  GGGANPSVKSQRNKVCRAATEEDFINGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRD 82
           GG   P   ++ +     A  ED   G  WPPRSYTC+FC+REF+SAQALGGHMNVHRRD
Sbjct: 5   GGFWIPKKSNKESSWEELAFAEDDAAGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRD 64

Query: 83  RALLYSPPADGQFTNLNLNLLHNPNPNISSYDEVTFVGRKASD--LKLSSMTTEIATKPN 142
           RA L    AD Q+            P  SS  E  +   K SD   + S  T    TKPN
Sbjct: 65  RARL--KQADDQYL----------FPKSSSSPE--YPSHKDSDNIHETSCYTLVFNTKPN 124

Query: 143 MFERGHWKKGEKFNIGLDIEISTTSSTNVLTDSK 175
            F+  H            I++S++SS   LT S+
Sbjct: 125 YFKTQH---------SCVIDLSSSSSLPYLTPSR 135

[Close]

BLAST of CsGy3G012420 vs. TAIR 10
Match: AT2G42410.1 (zinc finger protein 11 )

HSP 1 Score: 84.7 bits (208), Expect = 8.5e-17
Identity = 54/128 (42.19%), Postives = 71/128 (55.47%), Query Frame = 0


Query: 50  ISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALLYSPPADGQFTNLNLNLLHNPNPN 109
           I WPP++YTC+FC+REFRSAQALGGHMNVHRRDRA L   P+   F   +   + NPNPN
Sbjct: 42  IPWPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPS-WLFEPHHHTPIANPNPN 101

Query: 110 ISSYDEVTFVGRKASDLKLSSMTTEIATKPNMFERGHWKKGEKF-NIGLDIEISTTSSTN 169
            SS                SS TT    +P++  +    K   F +   D+  STTS   
Sbjct: 102 FSS--------------SSSSSTTTAHLEPSLTNQR--SKTTPFPSARFDLLDSTTSYGG 152

Query: 170 VLTDSKKD 177
           ++ D +K+
Sbjct: 162 LMMDREKN 152

[Close]

BLAST of CsGy3G012420 vs. TAIR 10
Match: AT4G17810.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 82.4 bits (202), Expect = 4.2e-16
Identity = 34/38 (89.47%), Postives = 37/38 (97.37%), Query Frame = 0


Query: 47 INGISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRA 85
          I+G +WPPRSYTCNFC+REFRSAQALGGHMNVHRRDRA
Sbjct: 36 ISGTTWPPRSYTCNFCRREFRSAQALGGHMNVHRRDRA 73

[Close]

BLAST of CsGy3G012420 vs. TAIR 10
Match: AT5G06070.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 77.8 bits (190), Expect = 1.0e-14
Identity = 53/131 (40.46%), Postives = 60/131 (45.80%), Query Frame = 0


Query: 49  GISWPPRSYTCNFCKREFRSAQALGGHMNVHRRDRALL----YSPPADGQFTNLNLNLLH 108
           G  WPPRSY+C+FC REF+SAQALGGHMNVHRRDRA L     SP +  Q T        
Sbjct: 47  GCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLSPSSTDQAT-------- 106

Query: 109 NPNPNISSYDEVTFVGRKASDLKLSSMTTEIATKPNMFERGHWKKGEKFNIGLDIEISTT 168
              P      +V  VG K        +  E   KPN               G   EIS  
Sbjct: 107 --PPECDRQQQVLDVGSKV-------LVQEETRKPN---------------GTKREISDV 145

Query: 169 SSTNVLTDSKK 176
            + NVL  S K
Sbjct: 167 CNNNVLESSMK 145

The following BLAST results are available for this feature:

BLAST of CsGy3G012420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38895	2.8e-17	34.30	Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 S...	[more]
O80942	4.9e-17	40.91	Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1	[more]
Q9SLB8	1.2e-15	42.19	Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1	[more]
Q9LHS9	1.5e-13	40.46	Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9SR34	4.6e-07	75.00	Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1	[more]

BLAST of CsGy3G012420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134421.1	5.15e-134	100.00	transcriptional regulator SUPERMAN [Cucumis sativus]	[more]
KAE8650336.1	3.96e-131	100.00	hypothetical protein Csa_011537 [Cucumis sativus]	[more]
XP_008438560.1	3.45e-128	96.30	PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo]	[more]
KAA0049282.1	1.08e-116	96.53	transcriptional regulator SUPERMAN-like [Cucumis melo var. makuwa] >TYK17275.1 t...	[more]
XP_038877188.1	3.38e-107	86.32	transcriptional regulator SUPERMAN-like [Benincasa hispida]	[more]

BLAST of CsGy3G012420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9Y8	2.49e-134	100.00	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G141870 P...	[more]
A0A1S3AWP0	1.67e-128	96.30	transcriptional regulator SUPERMAN-like OS=Cucumis melo OX=3656 GN=LOC103483626 ...	[more]
A0A5A7U0H2	5.23e-117	96.53	Transcriptional regulator SUPERMAN-like OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A6J1IX36	4.27e-67	62.14	transcriptional regulator SUPERMAN-like OS=Cucurbita maxima OX=3661 GN=LOC111479...	[more]
A0A6J1E9R8	1.57e-66	63.24	zinc finger protein 11-like OS=Cucurbita moschata OX=3662 GN=LOC111432071 PE=4 S...	[more]

BLAST of CsGy3G012420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23130.1	2.0e-18	34.30	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT2G37740.1	3.4e-18	40.91	zinc-finger protein 10	[more]
AT2G42410.1	8.5e-17	42.19	zinc finger protein 11	[more]
AT4G17810.1	4.2e-16	89.47	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G06070.1	1.0e-14	40.46	C2H2 and C2HC zinc fingers superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 57..79 e-value: 0.0045 score: 26.2
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 59..79
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 57..84 score: 11.219034
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 57..81 e-value: 5.5E-7 score: 29.5
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 50..89 e-value: 3.3E-5 score: 25.6
None	No IPR available	PANTHER	PTHR45801:SF64	TRANSCRIPTIONAL REGULATOR SUPERMAN	coord: 29..186
None	No IPR available	PANTHER	PTHR45801	OS07G0101800 PROTEIN	coord: 29..186
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 54..84

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G012420.1	CsGy3G012420.1	mRNA