CsGy2G007350 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy2G007350
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	U3 small nucleolar RNA-associated protein 11
Location	Gy14Chr2: 5893100 .. 5898924 (-)
RNA-Seq Expression	CsGy2G007350
Synteny	CsGy2G007350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCAACTCTCCCTTCGAATTTTTTCTTCTCTCCTACAAAACCCTCCCGCCCACGCCTCCAACAAACGTCCACCGCCCTGCGCATCCCCTAAACCGCACCCTAGCCTTTGCCTCTTTCACAAACTACAGCCACCTAGCCTCCTTCTCAGATTGCTCAAGAACCGGAAAGTGAAAGCGGGGGAGAAATTTGATTTCAAGTTCTCCAACCTCAAGGCAGTCCAAGTACTTCTTCTTTTGTTTGAAAGTGTGAATCATTAATATTTGTTTTCGTTCTTTATTCTGATAGTTTTTCAATGAAGGGTCTAAGCTTATATGACTTCCTCAAATTTTTTCTTTTGGGTTTAAGGAATATGCTCCACTATGATTTGGGCTTTTTCATTCTGATTAATGATGTTGCAATTAATTGAGGAAAGTGGTTGTAATGACTGTTTTTTATAAGCAGTTTCAGTATGTTTTAAGGAATGACCACACCGTCTTCAGTCTCGGCATTAGAAGATTGGTCATCATTTTGCATCCGTATTTTATTTGATGCTATTTTGTTCTCCCTATAGGTTTATTTATGAATACTTTTTAATTCATTTATCTTTCTGATAAATTCAATTATGGACAATATAAGATTAGTTGATAAATCCAATGGCATTTTTCGTGGGGGACTCAACTAAATAAGTCATGCATTCTTCATTCCCCCAGTTTTATGAAGTAACATGTGATTGAAGAAAGGGAAAATAGTTAGAGGAAGAAGGTGTGGAATTAAATGAGAATTCTGTAAAAGTTTTCCTGGACTGTGAATTTGGGGATTGCAATTGTGTATATTAATCTGTACATTAAATTTTAGGATTTTTTAATGTATGTGAATGCTGTTGGTGAATATTATTCTTGTGTACGTTGGAGTTAAGTTTTGGTCGAAAAGTGTTTGTGAGATAATTTGGAGTTAATTTGTGGTTGAATGAGATTAATATTTTGGTAGAAGTGGAGGTTTGTGACTAAATATTGTTGGTCATTACTTTTTTTTAACCTTTTTTCGGTTAATTAGTGGTTGAAATTTTGTGGGATCTTTTGGGGAGAGGAAAAGTAGAGTTTTTCGCGGTGTGAAGAGGGACCTATTGAAGTTTGGTCCTTCGTAAGGTTTTAGTTTCACGTTTCTGGTTGGACTTCAGTTTCGAAGACTTTTTGTAATTATTCTCTTGGCAATATCTTATTTGGTTGGAAACCCTTTCTTGGGGTTTTTTGTATGCCCTTGTTTTTGTTTTGTTTTTTTTAATGAAAGCAGTTGTTTCTATGAAAAAGTATATGTAATTGAAATTTTTGGATTCGTTTTATGGATGAATGTTGTTGGTGAATTTTATTGTTGTGTACATTGTAGTTAAATTTTGGTTGAATAGTGTTGCTTTGATAATTTAGAGTTAGTTTGTGGTTGAATTATATTTATATTTGATTTTATAGGAGTGGACTAATGGATTGTAATGAATTAGTGTGTACTTCCTATTAACACACTTTTAGATTTGGAAAAGAAGACTAGCCAAAACAACTAATTACCTATAATTTATTCATTTGTTTAATCATAACAAGTACTTAATACAAATTACAAATGTATGAATTTTAAGACTACGGAATTGTTCATAATTTGTATAATTAGGAAAGGAATTCTCATTTCTTCTTTCTCGTTCTCAATAGTGAAAATTACTCACCAAAAGTAATAGAGATCCAAACTTGTTTTCATTTAAAATGAGAATCCAGTATCCACTCATCAAAAGCCGCCAAAGTAATATTATCTCTTAGGGTTTCTTTCTTTCCATGAAAGGTTAACAACTTATACATAGAAGTCACTCATCAAAAGCCAAGCTAATATACTAACTTAATTTTACCACAAAAGTTCCGTTGCTCATATGTTTTATAGGGTTGATGAGAGGTTTCAAATTAAGTTAGAACCTATGCCTAAACCTACTGACATTGCTTTTGACATATGAGAATGATCAAGAGTTGTCCGTATAACGCTGATAGCTTTATAAATCATACAGTGTTTTTTTAAGAAAGCCTAAACCCTTTCATCTTCATCTCATTCTCACTCTCACTCTCACGTGCTCCACCTCCTTTTTCTTCTTCTGCTGCTGTCTTCTTTCACTGTGTCTTTCTGCCTTCTGCCACTTATGCAATTTTTGCTTTTATCTGTCATCATTCTCAAAGTAGGAAATACATGCACATGTGCAAATACCCTAAAAATTTATGTTCGTTGTTGAATAACATTGCTCTCACAAGTACCTGTAAAAGGCAGCATTTGAATCCCGCTTCATCTTCCCCTAAACCTGTCTAACTGTTAAATCTGTTAGTCGTCATTCTCATCTGTTAGAATATCAACTTTTTTTCTTCTTCTAAACTTGTCGATAGATGTGGATTTCTCTGGTTTCGGGATTGGGTATTTGATTTGTTATTTAAAATGGTGTTCTATTAATAGAAACTTTGAATTTAATCTATGATTTTGTGGAATTTGGGTTGACTGCCTTCTTAACAGTAATATTAACTTACGTGATTGTTTTATGTTTTGGTGTAGGGAAACTAAGACTTAGAAATCATTATTTGGTTGTACTTGCACATCAGTTTCTCGCTCTCTTATTGATTGCAATGTCATCCCTAAGGAATGCGGTTCCTAGACGGCCTTACAAGGAGCGAGCTCAACCGTAAGTGATTAAGTTTTTTCATGGTTTTTTGTTTCTTAAAAATGGAAATTTCAATGTCTAACCTCTTTTATTGGTGATGGGCTCCTGTGATTCATTAGGCAATCTCGGAAAAAATTTGGACTTCTTGAGAAACACAAAGATTATATTCAGCGTGCTAAGGCTTTTCATAAGAAGGAAGATACTTTACGGGTAAACTTTGAAATGCCTGTACATCTATTTTCTAATGTTCAGTGAAGGAAATTTTTTTGTTGTTTACTGCCTTCTATAAATGTCCGTGATTTGGTTGTTCTGTATTTTTTATTGTTTGATTTTCAGAAACTTAAAGAGAAAGCAGCCTTCAAGAATCCAGATGAATTTTACTTTAAGATGATTAGGACGAGAACAGTTGATGGAGTCCATAAACCAGAGTAACGATCTTAGATGATTTCTAGCATAAGATGAATTTCAGCTCTTCTCTTCGTTTCCTTATGTCTCTTGATCTTTATATATTGTATAGGAGTCATGTTAATAAGTATACTGCAGAGCAACTCATGCTGATGAAGACCCAAGATGCAGGTTATATACTTCAGAAGATGCAGAGTGAGAAAAAGGTGGGTTCTTTCGTTCCTTTAGTAACAAGGATTGCTTTGAAAAACTTGCTGATTTATTACTTTATCTAATATATCAAACTCGCACTCCTCTGTACAGAAAATTGAAAAACTGACAGCAACGTTGCATTCTCTTGACAATCAGCCATCAAATAAGCATCTTTACTTTGCTGAAGACAGGTGTGAGCACAATTTGAAACTTTTTCCACTTTTCCAAATGAAAACGCATGAAATAATTCTTGGTCTGCAAACAAATGGGTGGAATCATATAATGTCCACTTACAGTTACTATACTTTGGGTTTCAAACAAGAGCGTCAGGAATGCATAAACATAAGATAAATTTATGATAGAGGGCCTTTTTTACACTAAAGATAAATATATACCAAAGAACTTTTGATGCTGTTGGCCTATGTCATCTTACTTCACAAAAATGCATTCAACCTACTTATTTTACTCAATTTTTTCTGGTGAACATGACTCATTTTCTCCCTGCAAACCCTAAAGCAGTGAAGTTATTTATGTTAATAAATCATTGTCGATTACTTGCAGGGAGGAAGCCAATGAAATTTTATCTCGTTCTTCTAAAGGATTGGTGGCATCATCTGAGGCAGTTCCTGATAGTATTAGAAGGTAACATTATTACCTAGGATACTGACTGCTGCATGTGAATCTTTTTATTTACAAACAGGGCACTTTTATTTGATCCTTACGAGTTTATGTAAATCCCCTCTTCAATCATAGTTGATTACATAATTTCAGGGAGAGCCCCAACGGATCAAAATGAATTAGCCAACAAATAAACTTTTTCCTACTCCTTCACCTCCATTGAGTATTTTCCACTTCTCTTTAATGACATCCTCTGTAAATTATGAGTACAAAAATCGAGTTCATTTTAATGAAAATGAAAGGCGTGGGTTCTAATAATATGTGAGGTTGCATTTACATTTGATTTTTTTTAGTAGTTGGACATTTGGGATAGAATCATTTGCAATCAAAAATGTTCTGGTCTAAACACTTAATCTTCTAAAATCGACTAGGTTCTCTATCCGATTATGACTAAGAGGTTCAATTTTTCACTTAGCAAGTGGTATATATTTTACCCCAGAGGGACTTTCATTCCAACTGCTCAAGATTGTTGCCGATTTGTGTGGTTTCCTTCTTTCATTAGTGATGCTCTTTTTTTTAACACAGGAAAACCATTTCTTCGTACAAAGAATTGGAGGCAAGGAGGAGTAGAGTAAATGAACTAGAGAAACTTTATATGGATATGACACTACAGCAAGAATTAAGGGTACGTTCTAATGTGCTTTTACCTGTTCAAGCATGGTGGACAAGTAGACTGTGTTAAAATGATTATTGAATCTGATATGTGATGATGCATGCTTATATCAGAAAAAGGGTCGCAAACGTAAACTCCGAGAAGATGAACTTTCCAATCCAACTTTGAAACCTGTATATAAGTGGCGGGCAGAACGAAAGCGCTAAAAGGTTAACACTTTTGCTAGCTATATAAAGTTCCGATTATTCTAAAAGAAATTGCTATATTTAGACAACATCAGATTGTCAAGTTTGTAAAAGTTTTGTCTTTGATGTTGCTTTGCGATGGTCCATTGCTCAGGAAAGAAATTAAGGTGTATTTGTAATGACTCTTGAAAAATGTTTTTTCAACAATGTCAATCTTCGTATAGGTGATTTGTGAGATGTGGTTCTTTGGTAGATAGCATGCTTCTTCATAGGACTCGAAGGGTAAAGTTTTTGTAAATGCATGTAACGCCTTGTTCTGCTTGGGTTGAGTTCTTTTTTTAGATTATGTATTAAATAATTATACTTTAACTAATTGGTCCAATTGAAAAATTGGTAGTACTAGTAACATTTGTTTTTGGAAAAAAATTGCTAGATGGTTTACCAAATGGACATAGGTTGCCCTTCCCTAATATCTAGTTAAGTGGTGTGTTATTATTGCTATTTCTTTTCCTTTCTTAGACTTTCGGAATCATTTGAACATTTCGTATGAGTCTAGTGATTGTTTTTCCTATTTGGGTTGTGTACTTTGACTTCAACTCTCAAGAATTGAAGAACTTGGAAAAATTCAAGAACCATAAAAATGTGATTAGTTTTAGTTTCGTATTACAGAAAAATAGCACTTCAAATTTCTTAAATTGCCCTTGTATTTGTTTTTGTTTCAGTCCCTTGCCCAAGCATAGTTTGCAAGATGTATTTGCAATTTCCAAGGAAACTGGATGAAGCATTGTTTGTTTACCATACAAATGCTTTGAAAGTTGGCTGAAATCACAAGGACCTAAAATTTTGTTTTCACAGCTAATGAGTTAAAACCATGCTGTGTTTCTTCTGGAATGAAGAATGTAATCAATTTTTTGTTGCTGCTATTTACTGTGGAATATAGTTTAAAACGGGTGGATAAATCGAACCTGGGCTTTAGATGTTGTAATGTTGTAGTTTTACGTTTTAATTTGGATTCTGGGTTTCAAGATTTATTCTTTTAGCTGAGGTTTGAAATTTCGTTGTCTATATCAAGGTCTCAATTTTATATAAATATCAGCC

mRNA sequence

CCTCAACTCTCCCTTCGAATTTTTTCTTCTCTCCTACAAAACCCTCCCGCCCACGCCTCCAACAAACGTCCACCGCCCTGCGCATCCCCTAAACCGCACCCTAGCCTTTGCCTCTTTCACAAACTACAGCCACCTAGCCTCCTTCTCAGATTGCTCAAGAACCGGAAAGTGAAAGCGGGGGAGAAATTTGATTTCAAGTTCTCCAACCTCAAGGCAGTCCAAGGAAACTAAGACTTAGAAATCATTATTTGGTTGTACTTGCACATCAGTTTCTCGCTCTCTTATTGATTGCAATGTCATCCCTAAGGAATGCGGTTCCTAGACGGCCTTACAAGGAGCGAGCTCAACCGCAATCTCGGAAAAAATTTGGACTTCTTGAGAAACACAAAGATTATATTCAGCGTGCTAAGGCTTTTCATAAGAAGGAAGATACTTTACGGAAACTTAAAGAGAAAGCAGCCTTCAAGAATCCAGATGAATTTTACTTTAAGATGATTAGGACGAGAACAGTTGATGGAGTCCATAAACCAGAGAGTCATGTTAATAAGTATACTGCAGAGCAACTCATGCTGATGAAGACCCAAGATGCAGGTTATATACTTCAGAAGATGCAGAGTGAGAAAAAGAAAATTGAAAAACTGACAGCAACGTTGCATTCTCTTGACAATCAGCCATCAAATAAGCATCTTTACTTTGCTGAAGACAGGGAGGAAGCCAATGAAATTTTATCTCGTTCTTCTAAAGGATTGGTGGCATCATCTGAGGCAGTTCCTGATAGTATTAGAAGGAAAACCATTTCTTCGTACAAAGAATTGGAGGCAAGGAGGAGTAGAGTAAATGAACTAGAGAAACTTTATATGGATATGACACTACAGCAAGAATTAAGGAAAAAGGGTCGCAAACGTAAACTCCGAGAAGATGAACTTTCCAATCCAACTTTGAAACCTGTATATAAGTGGCGGGCAGAACGAAAGCGCTAAAAGTCCCTTGCCCAAGCATAGTTTGCAAGATGTATTTGCAATTTCCAAGGAAACTGGATGAAGCATTGTTTGTTTACCATACAAATGCTTTGAAAGTTGGCTGAAATCACAAGGACCTAAAATTTTGTTTTCACAGCTAATGAGTTAAAACCATGCTGTGTTTCTTCTGGAATGAAGAATGTAATCAATTTTTTGTTGCTGCTATTTACTGTGGAATATAGTTTAAAACGGGTGGATAAATCGAACCTGGGCTTTAGATGTTGTAATGTTGTAGTTTTACGTTTTAATTTGGATTCTGGGTTTCAAGATTTATTCTTTTAGCTGAGGTTTGAAATTTCGTTGTCTATATCAAGGTCTCAATTTTATATAAATATCAGCC

Coding sequence (CDS)

ATGTCATCCCTAAGGAATGCGGTTCCTAGACGGCCTTACAAGGAGCGAGCTCAACCGCAATCTCGGAAAAAATTTGGACTTCTTGAGAAACACAAAGATTATATTCAGCGTGCTAAGGCTTTTCATAAGAAGGAAGATACTTTACGGAAACTTAAAGAGAAAGCAGCCTTCAAGAATCCAGATGAATTTTACTTTAAGATGATTAGGACGAGAACAGTTGATGGAGTCCATAAACCAGAGAGTCATGTTAATAAGTATACTGCAGAGCAACTCATGCTGATGAAGACCCAAGATGCAGGTTATATACTTCAGAAGATGCAGAGTGAGAAAAAGAAAATTGAAAAACTGACAGCAACGTTGCATTCTCTTGACAATCAGCCATCAAATAAGCATCTTTACTTTGCTGAAGACAGGGAGGAAGCCAATGAAATTTTATCTCGTTCTTCTAAAGGATTGGTGGCATCATCTGAGGCAGTTCCTGATAGTATTAGAAGGAAAACCATTTCTTCGTACAAAGAATTGGAGGCAAGGAGGAGTAGAGTAAATGAACTAGAGAAACTTTATATGGATATGACACTACAGCAAGAATTAAGGAAAAAGGGTCGCAAACGTAAACTCCGAGAAGATGAACTTTCCAATCCAACTTTGAAACCTGTATATAAGTGGCGGGCAGAACGAAAGCGCTAA

Protein sequence

MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATLHSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEARRSRVNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR*

Homology

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BLAST of CsGy2G007350 vs. ExPASy Swiss-Prot
Match: Q8S1Z1 (Probable U3 small nucleolar RNA-associated protein 11 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0810000 PE=2 SV=2)

HSP 1 Score: 306.2 bits (783), Expect = 3.1e-82
Identity = 157/229 (68.56%), Postives = 190/229 (82.97%), Query Frame = 0


Query: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSLRNA+ RR +KERAQP+SRKKFGLLEKHKDYI RAKAFH+KE+T+RKLKEKA+F+NP
Sbjct: 1   MSSLRNAIQRRAHKERAQPESRKKFGLLEKHKDYIVRAKAFHQKEETIRKLKEKASFRNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120
           DEFYFKMI ++TVDG+H+P+   NKYT ++LML+KT+D GYILQ +QSEKKKIEKL++ L
Sbjct: 61  DEFYFKMINSKTVDGIHRPKPEANKYTEDELMLLKTKDMGYILQGIQSEKKKIEKLSSML 120

Query: 121 HSLDNQPSNKHLYFAEDREEANEILSR-SSKGLVASSEAVPDSIRRKTISSYKELEARRS 180
           H LDN+  NKH+YFAEDREE  EI SR   K      + +P  I+RKT SSY+ELE R+ 
Sbjct: 121 HELDNKRPNKHVYFAEDREEVKEIQSRIEQKSSSLGLDNIPSRIKRKTASSYRELEERKQ 180

Query: 181 RVNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR 229
           RV +LEKLY DM LQ+EL+K GRKRKLREDE+ N T +PVYKWRA+RKR
Sbjct: 181 RVQKLEKLYADMALQKELKKPGRKRKLREDEIENQTSRPVYKWRAQRKR 229

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BLAST of CsGy2G007350 vs. ExPASy Swiss-Prot
Match: Q9M223 (Probable U3 small nucleolar RNA-associated protein 11 OS=Arabidopsis thaliana OX=3702 GN=At3g60360 PE=1 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 2.6e-73
Identity = 140/228 (61.40%), Postives = 183/228 (80.26%), Query Frame = 0


Query: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSLRNA+PR  +KER+QP++RK+FG+LEKHKDYI RA A+HKK++TL+ L++KAAFKNP
Sbjct: 1   MSSLRNAIPRPAHKERSQPEARKRFGILEKHKDYIIRANAYHKKQETLKILRQKAAFKNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120
           DEF FKMI ++TVDG H+P+  VNKY+AE+LM+MKTQD GY+ QK QSEK KI+KLTA+L
Sbjct: 61  DEFNFKMINSKTVDGRHRPKDEVNKYSAEELMIMKTQDIGYVFQKWQSEKNKIDKLTASL 120

Query: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEARRSR 180
               +Q S +H+Y+AEDREEA E+  +       S+  +P  I++K   SY++LE R+SR
Sbjct: 121 QCTGDQSSRRHVYYAEDREEARELEVQGRSKSDISTVEIPKDIKKKMDRSYRDLEGRKSR 180

Query: 181 VNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR 229
             +LEKLY DM++Q+EL+KKGRKRKLR+DEL NP  K VYKWRA+RKR
Sbjct: 181 AKDLEKLYTDMSMQKELQKKGRKRKLRDDELLNPNGKAVYKWRADRKR 228

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BLAST of CsGy2G007350 vs. ExPASy Swiss-Prot
Match: Q55C50 (Probable U3 small nucleolar RNA-associated protein 11 OS=Dictyostelium discoideum OX=44689 GN=utp11 PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.7e-27
Identity = 85/227 (37.44%), Postives = 130/227 (57.27%), Query Frame = 0


Query: 3   SLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNPDE 62
           +LR  +P+R  +ER QP+S KK G LE+ KDY++RAK ++ K DTL+KLK +AAFKNPDE
Sbjct: 5   NLRRLLPQRAKQERPQPESSKKKGFLERKKDYVERAKDYNNKRDTLKKLKLQAAFKNPDE 64

Query: 63  FYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATLHS 122
           F +KMI ++ VDGVH  E        EQ++ +KTQD  Y+  K +++ KKIE+L ATL  
Sbjct: 65  FNYKMISSKLVDGVHS-EISKTSLKKEQIIDIKTQDILYLQSKRRADDKKIERLQATLQY 124

Query: 123 LDN--QPSNKHLYFAEDREEAN----------------------EILSRSSKGLVASSEA 182
           +D+  +P+ + +Y  +++E  N                      +I       LV + + 
Sbjct: 125 MDSGLEPTEQIIYVDDEKEVKNFSATKYFDTVPDAFNGSLSTIPKISKLKEGSLVVNPKT 184

Query: 183 VP--DSIRRKTISSYKELEARRSRVNELEKLYMDMTLQQELRKKGRK 204
            P    +   T +SYKEL+ R+ R ++L K  MD++  +   K+G K
Sbjct: 185 APTLGQLEAMTATSYKELKERKLRRDQLFKAEMDLSKSKIQLKRGTK 230

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BLAST of CsGy2G007350 vs. ExPASy Swiss-Prot
Match: Q9CZJ1 (Probable U3 small nucleolar RNA-associated protein 11 OS=Mus musculus OX=10090 GN=Utp11 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.1e-26
Identity = 87/244 (35.66%), Postives = 135/244 (55.33%), Query Frame = 0


Query: 10  RRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNPDEFYFKMIR 69
           +R ++ER+QP  RK+ GLLEK KDY  RA  +HKK+D LR L++KA  KNPDEFY+KM R
Sbjct: 13  QREHRERSQPGFRKRLGLLEKKKDYKLRANDYHKKQDFLRALRKKALEKNPDEFYYKMTR 72

Query: 70  TRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATLHSLDNQ--P 129
            +  DGVH  + +  + TAEQL LM+TQD  YI  K  +E KKIE+L + LH LD Q   
Sbjct: 73  AKLQDGVHIFKENKEEVTAEQLKLMRTQDIKYIEMKRVAEAKKIERLKSELHLLDFQGKQ 132

Query: 130 SNKHLYFAEDREE------------ANEILSR-----------SSKGLVASSEAVPDSIR 189
             KH++F + ++E            A E++ R             +   A+ +     I 
Sbjct: 133 QKKHVFFFDTKKEVERFDVATHLQTAPELVDRVYNRPRIETLQKERVKGATPQTGLKRIA 192

Query: 190 RKTISSYKELEARRSRVNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRA 229
           ++    Y  L  R  R  +L  +   +  +++L  K +K K++++ +++P    +Y+++ 
Sbjct: 193 KERQKQYDCLTQRIEREKQLFVVAQKIQTRKDLMDKTQKVKVKKETVNSPA---IYRFQT 252

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BLAST of CsGy2G007350 vs. ExPASy Swiss-Prot
Match: Q8R5K5 (Probable U3 small nucleolar RNA-associated protein 11 OS=Rattus norvegicus OX=10116 GN=Utp11 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.5e-25
Identity = 88/254 (34.65%), Postives = 138/254 (54.33%), Query Frame = 0


Query: 2   SSLRNAVP--RRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKN 61
           ++ R AV   +R Y+ER+QP  RK  GLLEK KDY  RA  + KK++ L+ L++KA  KN
Sbjct: 3   AAFRKAVKSRQREYRERSQPGFRKHLGLLEKKKDYKLRADDYRKKQEYLKALRKKALEKN 62

Query: 62  PDEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTAT 121
           PDEFY+KM R +  DGVH  +    + T EQL LM+TQD  YI  K  +E KKIE+L + 
Sbjct: 63  PDEFYYKMTRVKLQDGVHIIKETKEEVTPEQLKLMRTQDVKYIEMKRVAEAKKIERLKSE 122

Query: 122 LHSLDNQ--PSNKHLYFAEDREE------------ANEILSR-----------SSKGLVA 181
           LH LD Q    N+H++F + ++E            A E++ R             K    
Sbjct: 123 LHLLDFQGKQQNRHVFFFDTKKEVEQFDVAAHLQTAPELVDRVFNRPRIETLQKEKVKGV 182

Query: 182 SSEAVPDSIRRKTISSYKELEARRSRVNELEKLYMDMTLQQELRKKGRKRKLREDELSNP 229
           +++     I ++    Y  L  R  R  +L  +   +  +++L  K +K K++++ +++P
Sbjct: 183 TNQTGLKRIAKERQKQYNCLTQRIEREKKLFVIAQKIQTRKDLMDKTQKVKVKKETVNSP 242

[Close]

BLAST of CsGy2G007350 vs. NCBI nr
Match: XP_004152832.1 (probable U3 small nucleolar RNA-associated protein 11 [Cucumis sativus] >XP_031737446.1 probable U3 small nucleolar RNA-associated protein 11 [Cucumis sativus])

HSP 1 Score: 431 bits (1107), Expect = 1.04e-151
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0


Query: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP
Sbjct: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120
           DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL
Sbjct: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120

Query: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEARRSR 180
           HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEARRSR
Sbjct: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEARRSR 180

Query: 181 VNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR 228
           VNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR
Sbjct: 181 VNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR 228

[Close]

BLAST of CsGy2G007350 vs. NCBI nr
Match: KAE8651705.1 (hypothetical protein Csa_006293 [Cucumis sativus])

HSP 1 Score: 431 bits (1107), Expect = 3.41e-151
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0


Query: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP
Sbjct: 34  MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 93

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120
           DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL
Sbjct: 94  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 153

Query: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEARRSR 180
           HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEARRSR
Sbjct: 154 HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEARRSR 213

Query: 181 VNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR 228
           VNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR
Sbjct: 214 VNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR 261

[Close]

BLAST of CsGy2G007350 vs. NCBI nr
Match: XP_008441892.1 (PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Cucumis melo] >XP_008441893.1 PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Cucumis melo] >XP_008441895.1 PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Cucumis melo] >XP_008441896.1 PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Cucumis melo] >XP_008441897.1 PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Cucumis melo] >XP_016899516.1 PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Cucumis melo] >KAA0047710.1 putative U3 small nucleolar RNA-associated protein 11 [Cucumis melo var. makuwa] >TYK08364.1 putative U3 small nucleolar RNA-associated protein 11 [Cucumis melo var. makuwa])

HSP 1 Score: 418 bits (1075), Expect = 7.83e-147
Identity = 220/228 (96.49%), Postives = 226/228 (99.12%), Query Frame = 0


Query: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYI+RAKAFHKKEDTLRKLKEKAAFKNP
Sbjct: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120
           DEFYFKMIRTRTVDGVHKPES VNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL
Sbjct: 61  DEFYFKMIRTRTVDGVHKPESRVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120

Query: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEARRSR 180
           HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKT++SYKELEARRSR
Sbjct: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTVASYKELEARRSR 180

Query: 181 VNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR 228
           V+ELEKLYMDMTLQQELRKKGRKRKLREDE++NPT KPVYKWRAERKR
Sbjct: 181 VSELEKLYMDMTLQQELRKKGRKRKLREDEVANPTSKPVYKWRAERKR 228

[Close]

BLAST of CsGy2G007350 vs. NCBI nr
Match: XP_038889584.1 (probable U3 small nucleolar RNA-associated protein 11 [Benincasa hispida])

HSP 1 Score: 411 bits (1057), Expect = 4.34e-144
Identity = 217/228 (95.18%), Postives = 224/228 (98.25%), Query Frame = 0


Query: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYI+RAKAFHKKEDTLRKLKEKAAFKNP
Sbjct: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120
           DEFYFKMIRTRTVDGVHK ESHVNKYTAE+LMLMKTQDAGYILQKMQSEK+KIEKLTATL
Sbjct: 61  DEFYFKMIRTRTVDGVHKQESHVNKYTAEKLMLMKTQDAGYILQKMQSEKRKIEKLTATL 120

Query: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEARRSR 180
           HSLDNQPSNKH YFAEDREEANEILSRSSK LVASSEAVPDSI+RKTI+SYKELEARRSR
Sbjct: 121 HSLDNQPSNKHFYFAEDREEANEILSRSSKRLVASSEAVPDSIKRKTIASYKELEARRSR 180

Query: 181 VNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR 228
           V+ELEKLYMDMTLQQELRKKGRKRKLREDEL+NPT KPVYKWRAERKR
Sbjct: 181 VSELEKLYMDMTLQQELRKKGRKRKLREDELANPTSKPVYKWRAERKR 228

[Close]

BLAST of CsGy2G007350 vs. NCBI nr
Match: KAG6586143.1 (putative U3 small nucleolar RNA-associated protein 11, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 397 bits (1019), Expect = 2.78e-138
Identity = 209/229 (91.27%), Postives = 222/229 (96.94%), Query Frame = 0


Query: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSL+NAVP+RPYKERAQP SRKKFGLLEKHKDY++RAKA+HKKEDTLRKLKEKAAFKNP
Sbjct: 1   MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120
           DEFYFKMI+TRTVDGVH+PES VNKYTAEQLMLMKTQDAGYILQK+QSEK+KIEKLTATL
Sbjct: 61  DEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAGYILQKVQSEKRKIEKLTATL 120

Query: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGL-VASSEAVPDSIRRKTISSYKELEARRS 180
           HSLDNQPSNKH+YFAEDREEANEI SRSSKG  VASSEAVPDSI+RKTISSYKELEARRS
Sbjct: 121 HSLDNQPSNKHIYFAEDREEANEIQSRSSKGRSVASSEAVPDSIKRKTISSYKELEARRS 180

Query: 181 RVNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR 228
           RV+ELEKLYMDMTLQQEL KKGRKRKLREDEL+NPT KPVYKWRAERKR
Sbjct: 181 RVSELEKLYMDMTLQQELMKKGRKRKLREDELTNPTSKPVYKWRAERKR 229

[Close]

BLAST of CsGy2G007350 vs. ExPASy TrEMBL
Match: A0A0A0LKH7 (U3 small nucleolar RNA-associated protein 11 OS=Cucumis sativus OX=3659 GN=Csa_2G074140 PE=3 SV=1)

HSP 1 Score: 431 bits (1107), Expect = 5.02e-152
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0


Query: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP
Sbjct: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120
           DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL
Sbjct: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120

Query: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEARRSR 180
           HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEARRSR
Sbjct: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEARRSR 180

Query: 181 VNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR 228
           VNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR
Sbjct: 181 VNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR 228

[Close]

BLAST of CsGy2G007350 vs. ExPASy TrEMBL
Match: A0A1S3B400 (U3 small nucleolar RNA-associated protein 11 OS=Cucumis melo OX=3656 GN=LOC103485902 PE=3 SV=1)

HSP 1 Score: 418 bits (1075), Expect = 3.79e-147
Identity = 220/228 (96.49%), Postives = 226/228 (99.12%), Query Frame = 0


Query: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYI+RAKAFHKKEDTLRKLKEKAAFKNP
Sbjct: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120
           DEFYFKMIRTRTVDGVHKPES VNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL
Sbjct: 61  DEFYFKMIRTRTVDGVHKPESRVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120

Query: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEARRSR 180
           HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKT++SYKELEARRSR
Sbjct: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTVASYKELEARRSR 180

Query: 181 VNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR 228
           V+ELEKLYMDMTLQQELRKKGRKRKLREDE++NPT KPVYKWRAERKR
Sbjct: 181 VSELEKLYMDMTLQQELRKKGRKRKLREDEVANPTSKPVYKWRAERKR 228

[Close]

BLAST of CsGy2G007350 vs. ExPASy TrEMBL
Match: A0A5A7TX11 (U3 small nucleolar RNA-associated protein 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G001760 PE=3 SV=1)

HSP 1 Score: 418 bits (1075), Expect = 3.79e-147
Identity = 220/228 (96.49%), Postives = 226/228 (99.12%), Query Frame = 0


Query: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYI+RAKAFHKKEDTLRKLKEKAAFKNP
Sbjct: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIERAKAFHKKEDTLRKLKEKAAFKNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120
           DEFYFKMIRTRTVDGVHKPES VNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL
Sbjct: 61  DEFYFKMIRTRTVDGVHKPESRVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120

Query: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEARRSR 180
           HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKT++SYKELEARRSR
Sbjct: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTVASYKELEARRSR 180

Query: 181 VNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR 228
           V+ELEKLYMDMTLQQELRKKGRKRKLREDE++NPT KPVYKWRAERKR
Sbjct: 181 VSELEKLYMDMTLQQELRKKGRKRKLREDEVANPTSKPVYKWRAERKR 228

[Close]

BLAST of CsGy2G007350 vs. ExPASy TrEMBL
Match: A0A6J1FGQ3 (U3 small nucleolar RNA-associated protein 11 OS=Cucurbita moschata OX=3662 GN=LOC111444029 PE=3 SV=1)

HSP 1 Score: 394 bits (1012), Expect = 1.57e-137
Identity = 208/229 (90.83%), Postives = 221/229 (96.51%), Query Frame = 0


Query: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSL+NAVP+RPYKERAQP SRKKFGLLEKHKDY++RAKA+HKKEDTLRKLKEKAAFKNP
Sbjct: 1   MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120
           DEFYFKMI+TRTVDGVH+PES VNKYTAEQLMLMKTQDAGYILQK+QSEK+KIEKLTATL
Sbjct: 61  DEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAGYILQKVQSEKRKIEKLTATL 120

Query: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGL-VASSEAVPDSIRRKTISSYKELEARRS 180
           HSLDNQPSNKH+YFAEDREEANEI SRSSK   VASSEAVPDSI+RKTISSYKELEARRS
Sbjct: 121 HSLDNQPSNKHIYFAEDREEANEIQSRSSKDRSVASSEAVPDSIKRKTISSYKELEARRS 180

Query: 181 RVNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR 228
           RV+ELEKLYMDMTLQQEL KKGRKRKLREDEL+NPT KPVYKWRAERKR
Sbjct: 181 RVSELEKLYMDMTLQQELMKKGRKRKLREDELTNPTSKPVYKWRAERKR 229

[Close]

BLAST of CsGy2G007350 vs. ExPASy TrEMBL
Match: A0A6J1HNU6 (U3 small nucleolar RNA-associated protein 11 OS=Cucurbita maxima OX=3661 GN=LOC111465374 PE=3 SV=1)

HSP 1 Score: 394 bits (1011), Expect = 2.23e-137
Identity = 208/229 (90.83%), Postives = 221/229 (96.51%), Query Frame = 0


Query: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSL+NAVP+RPYKERAQP SRKKFGLLEKHKDY++RAKA+HKKEDTLRKLKEKAAFKNP
Sbjct: 1   MSSLKNAVPKRPYKERAQPNSRKKFGLLEKHKDYVERAKAYHKKEDTLRKLKEKAAFKNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120
           DEFYFKMI+TRTVDGVH+PES VNKYTAEQLMLMKTQDAGYILQK+QSEK+KIEKLTATL
Sbjct: 61  DEFYFKMIKTRTVDGVHRPESQVNKYTAEQLMLMKTQDAGYILQKVQSEKRKIEKLTATL 120

Query: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGL-VASSEAVPDSIRRKTISSYKELEARRS 180
           HSLDNQPSNKH+YFAEDREEANEI SRSSKG  VASSEAVPDSI+RKTISSYKELEARRS
Sbjct: 121 HSLDNQPSNKHIYFAEDREEANEIQSRSSKGRSVASSEAVPDSIKRKTISSYKELEARRS 180

Query: 181 RVNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR 228
           RV+ELEKLYMDMTLQQEL KKGRKRKLREDEL+NPT K VYKWRAERKR
Sbjct: 181 RVSELEKLYMDMTLQQELMKKGRKRKLREDELTNPTSKSVYKWRAERKR 229

[Close]

BLAST of CsGy2G007350 vs. TAIR 10
Match: AT3G60360.1 (embryo sac development arrest 14 )

HSP 1 Score: 276.6 bits (706), Expect = 1.9e-74
Identity = 140/228 (61.40%), Postives = 183/228 (80.26%), Query Frame = 0


Query: 1   MSSLRNAVPRRPYKERAQPQSRKKFGLLEKHKDYIQRAKAFHKKEDTLRKLKEKAAFKNP 60
           MSSLRNA+PR  +KER+QP++RK+FG+LEKHKDYI RA A+HKK++TL+ L++KAAFKNP
Sbjct: 1   MSSLRNAIPRPAHKERSQPEARKRFGILEKHKDYIIRANAYHKKQETLKILRQKAAFKNP 60

Query: 61  DEFYFKMIRTRTVDGVHKPESHVNKYTAEQLMLMKTQDAGYILQKMQSEKKKIEKLTATL 120
           DEF FKMI ++TVDG H+P+  VNKY+AE+LM+MKTQD GY+ QK QSEK KI+KLTA+L
Sbjct: 61  DEFNFKMINSKTVDGRHRPKDEVNKYSAEELMIMKTQDIGYVFQKWQSEKNKIDKLTASL 120

Query: 121 HSLDNQPSNKHLYFAEDREEANEILSRSSKGLVASSEAVPDSIRRKTISSYKELEARRSR 180
               +Q S +H+Y+AEDREEA E+  +       S+  +P  I++K   SY++LE R+SR
Sbjct: 121 QCTGDQSSRRHVYYAEDREEARELEVQGRSKSDISTVEIPKDIKKKMDRSYRDLEGRKSR 180

Query: 181 VNELEKLYMDMTLQQELRKKGRKRKLREDELSNPTLKPVYKWRAERKR 229
             +LEKLY DM++Q+EL+KKGRKRKLR+DEL NP  K VYKWRA+RKR
Sbjct: 181 AKDLEKLYTDMSMQKELQKKGRKRKLRDDELLNPNGKAVYKWRADRKR 228

The following BLAST results are available for this feature:

BLAST of CsGy2G007350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S1Z1	3.1e-82	68.56	Probable U3 small nucleolar RNA-associated protein 11 OS=Oryza sativa subsp. jap...	[more]
Q9M223	2.6e-73	61.40	Probable U3 small nucleolar RNA-associated protein 11 OS=Arabidopsis thaliana OX...	[more]
Q55C50	1.7e-27	37.44	Probable U3 small nucleolar RNA-associated protein 11 OS=Dictyostelium discoideu...	[more]
Q9CZJ1	3.1e-26	35.66	Probable U3 small nucleolar RNA-associated protein 11 OS=Mus musculus OX=10090 G...	[more]
Q8R5K5	4.5e-25	34.65	Probable U3 small nucleolar RNA-associated protein 11 OS=Rattus norvegicus OX=10...	[more]

BLAST of CsGy2G007350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152832.1	1.04e-151	100.00	probable U3 small nucleolar RNA-associated protein 11 [Cucumis sativus] >XP_0317...	[more]
KAE8651705.1	3.41e-151	100.00	hypothetical protein Csa_006293 [Cucumis sativus]	[more]
XP_008441892.1	7.83e-147	96.49	PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Cucumis melo] ...	[more]
XP_038889584.1	4.34e-144	95.18	probable U3 small nucleolar RNA-associated protein 11 [Benincasa hispida]	[more]
KAG6586143.1	2.78e-138	91.27	putative U3 small nucleolar RNA-associated protein 11, partial [Cucurbita argyro...	[more]

BLAST of CsGy2G007350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKH7	5.02e-152	100.00	U3 small nucleolar RNA-associated protein 11 OS=Cucumis sativus OX=3659 GN=Csa_2...	[more]
A0A1S3B400	3.79e-147	96.49	U3 small nucleolar RNA-associated protein 11 OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
A0A5A7TX11	3.79e-147	96.49	U3 small nucleolar RNA-associated protein 11 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A6J1FGQ3	1.57e-137	90.83	U3 small nucleolar RNA-associated protein 11 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1HNU6	2.23e-137	90.83	U3 small nucleolar RNA-associated protein 11 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]

BLAST of CsGy2G007350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G60360.1	1.9e-74	61.40	embryo sac development arrest 14	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 106..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..24
None	No IPR available	PANTHER	PTHR12838:SF1	U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 11	coord: 1..228
IPR007144	Small-subunit processome, Utp11	PFAM	PF03998	Utp11	coord: 10..228 e-value: 4.1E-60 score: 203.8
IPR007144	Small-subunit processome, Utp11	PIRSF	PIRSF015952	U3snoRNP11	coord: 146..228 e-value: 1.8E-12 score: 44.7 coord: 1..154 e-value: 1.0E-55 score: 186.4
IPR007144	Small-subunit processome, Utp11	PANTHER	PTHR12838	U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 11	coord: 1..228

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G007350.2	CsGy2G007350.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0032040	small-subunit processome