CsGy2G004610 (gene) Cucumber (Gy14) v2.1

Overview


Name	CsGy2G004610
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
Description	Pre-mRNA-splicing factor 38
Location	Gy14Chr2: 3194793 .. 3198208 (-)
RNA-Seq Expression	CsGy2G004610
Synteny	CsGy2G004610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAATGGAGCATTCCCACTGATTATGATGTTTGTTCTTTCCCCCACTCGTATGACTCATTACGGCATTCTCTCCTCGTCCGGCTTTAAAATTAGGGTTTCGATCAATCTCCTCTGTCGATTTCCCCGTGCCCACACGGATTTCGCTGTTCTATAGCCGGTAGTTATGGCTAATCGGACAGACCCAGCTGCGAAAAGCATAAGGGGAACGAACCCCCAGAACCTAGTGGAGAAGATTCTTCGCTCCAAGATTTACCAGAACACTTACTGGAAGGAACAATGTTTTGGGTTAACGGCGGAGACATTGGTCGATAAAGCCATGGAGCTCGACCACCTCGGCGGTACATATGGTGGCAACCGCAAGCCCACGCCGTTCATGTGTCTTGTCATGAAGATGCTCCAGATTCAGCCGGAGAAGGAAATCGTGATCGAGTTCATTAAGAATGAAGACTACAAGTAATTGTTATTGTCATTTTACTTCTCATTAAGCAAAACTCTGGATTGTTGTTATCTAGAAGCGTTTTGGATTAGGGTTAATTGAAAGGAACATTGCAATTGTGTGTTGTATATGGAGATTAAGAAAACCAGGGTTTTGCAAAGTTACTGCGAAAAATTTATGAAAACTAAATGCTCGTAGGTCAAAGAGTTTTTGCAGTTGATCAGTGAATGATCCTAGAATTTCTGTATGGGCCTGTCTTTGTTAGTATGATTAATAAGTATAAGAAATGGATGAACTATCAAGCTTATGGTTGAGCTATCTTAAGTACATTGGAAATGTGTTATTTATCTCATGGTTTTCTATGGTTCTTAAAGTGATAGTTCACTTGCCTTAGCTTGCGATGATTGCTTTGCTTTTTATACTTTGTGGTCTTCAAAATCCGTTGTCAGTTAATAAGTACGTTGTCTCAGTGAATTCTCTCTCTTGTAATTTCCTGAGAATGCTACTTTTGAAATTATATATATATATATATTGTGACAGATATGTTCGGGTTCTTGGTGCCTTTTACTTGCGTCTCACTGGGACTGATGTTGATGTATATCGTTACCTGGAACCTTTGTACAACGACTATCGGAAATTGAGGAGAAAATTAGCTGATGGATGTAAGTTACTGAGCCTCTTTTTGAAATTTATTTAATTAGTCATTGTGAAAACTAGTTGATTTTACATTCTGGTTGGAATATTGTATTTTTAGTTATGATCTCCTCTCTAAAATGAAGTTGTGAGGCTCAATCTTATTTTTATCAGGTTTTTCTTTATCACACGTGGATGAAGTCATTGATGAACTTCTTACTAAAGATTATTCATGTGATGTAGCTCTGCCGCGTGTCAAAAAGAGGTATGGTACTGTTTACTCATTTGCCTATTTTCCAGTGGATTATTTTTCGAGTGGAAGTTGATAATATATTATTAGAATCAGGGAATTAGGAGAAATATTCATTATTCATTGTTTGATAAACAGAAGTACATGAATCACAAGTTCTAAATGTTGCTGTTCTGTTTTCTCTCTCTTGTATGTGTCTCTAGCGTTCAGTTTGGGTGTGATGTTTCCTTTGAAGTAACCTAAATATAAGACACACTTTGTAATGGCAGATGGACTCTTGAATCTGCTGGTTCATTGCCTCCAAGGAAAAGTGCTTTAGAAGATGACTTTGAGGAGGAGGAAGAAAAGGAGGAGGCTGAGCCAATTAATGATTCTTTAGAAGATGATATTCATGAAAAGGTATTAACGCATTATCTATTTGTATGTAATAGCATCTTGTTTGCATTTTCTTATTCTTGCTAACCTGCTTGATATCTTGCATCTGCAGAATTATTACCGTGGAAGAAGTCCGGTGCGGGAGAGAGACAGAGACAGAAGGCGTGATAGTCACAGACACAGGTTCAATTCCCTGTTTGTTTTATTCATTTATGCTCCCTCCCTCTCCTCTCGGTTTTTATGGAGCAATGAAACTTTGATGCTCTTTCTGATTTTATGAATATTTCCTCCTGTGGAGAATGCCATTATCTGATATTCCCTGTCTATTTGCTGCCTTTGATCCGTAGATCACCTTTTTTTCTGTTATTGTTGAATGTGAACAATAATTTTCTAGATCAATATCAACAAATTTGGACTCAAAATTTGTGACTTACTAAAGTCTTTCTGATGCCGATGCAATTCTTTTAATGGAGTTGCTGATGACCGTTGAAAAATTAGATTGAACAAATATTAGAAGATGAATAGGAGAGTGGAAATTGTGGCATGGCATGAAGTTATTAGCATGTTTTGGAAATTGATAAGGAATTCATAACAAAACATGACCCATTTTGTTTTGTTTTGATTTTTTTTTTAATTACTTGGCTGGAAGCAGTTGGAATTTGTTAATCTTGGATTGCTATTCGGATTTGTCATTTAACATTCGCATGTTTCTGTCACAACCATGGTATTTCAAGCCAATGGTTGCTTGCTGCTTCCTACAATAAATTCTTAAGATCCTGCCAGGTTTCTCTGTACTGACAGTGTGCAGCTGAGAAGTATGATGGATCGTACATATATTTGTCATAGTGATTTCATTTTCTCAATTTTACTTTTCCCATTGCATCGAAAGATTACGTGTTACTTAGATATGTTTTTGAGCTGTCTTACTACAATGTTCCATTGAGTGGGAACAATATTGATCTTTTGACACCGTATTTTCTTTTGTTTAATAACAGGGACCGAGATTATGATAGAGACCGAGACTATGACAGAGACTATGATAGAGATCGGGGACGTGGAAGGGAAAGAGATAGAGATCGAGAAAGGGATCGGGATCGAGACAGGGAACGGGACAGAGATAGAGATAGAGATAGAGATAGAGATAGGGATAGGGATAGGGATCGCTATCGCCTAAGGGATGAGAAGGAATATGGTAGAGATCGAGATAGGGAAAGGGAAGGCAGGGAGCGGGAGAGACGAGATAGAGATCGTGGTAGAAGAAGGAGCCATTCAAGGAGCCGAAGTAGGAGTAAAGATCGGGAAGATGGGGAGTACCGGAAGAGACACAGCCGTAGCAGTGTTAGTCCTAGAAGAAGGGACGGGGCGGAGGATAGGGAGGAACCGAAGAAGAAGAAAGAAAAGAAGGAGAAAAAAGAAGGTGGGGCAGGTGAGGAAGATCCGGAGATTGCAGAATGGAATAGGATTCGTGCTTCTCTTGGACTGGCACCTCTCAAGTAGATGGTTTTCTCTTCTTCAGTTTCAATGATATGTGAGTGAATTCTGTTTCATAAAGTATTGAAGTTAAAACTTGTTATCTATTAAAGTTTTGAGTTTGAGCCTTGTGGTTCTGATTTCTGTATAATATTAAATTTGCTGCTATGCTATTCTATTGCAATGTTGAATGATAGTATAAAATCACATTTGGAAATGCCTGCTTGTCCTATCCTATCCTATACTTGGG

mRNA sequence

CAAAATGGAGCATTCCCACTGATTATGATGTTTGTTCTTTCCCCCACTCGTATGACTCATTACGGCATTCTCTCCTCGTCCGGCTTTAAAATTAGGGTTTCGATCAATCTCCTCTGTCGATTTCCCCGTGCCCACACGGATTTCGCTGTTCTATAGCCGGTAGTTATGGCTAATCGGACAGACCCAGCTGCGAAAAGCATAAGGGGAACGAACCCCCAGAACCTAGTGGAGAAGATTCTTCGCTCCAAGATTTACCAGAACACTTACTGGAAGGAACAATGTTTTGGGTTAACGGCGGAGACATTGGTCGATAAAGCCATGGAGCTCGACCACCTCGGCGGTACATATGGTGGCAACCGCAAGCCCACGCCGTTCATGTGTCTTGTCATGAAGATGCTCCAGATTCAGCCGGAGAAGGAAATCGTGATCGAGTTCATTAAGAATGAAGACTACAAATATGTTCGGGTTCTTGGTGCCTTTTACTTGCGTCTCACTGGGACTGATGTTGATGTATATCGTTACCTGGAACCTTTGTACAACGACTATCGGAAATTGAGGAGAAAATTAGCTGATGGATGTTTTTCTTTATCACACGTGGATGAAGTCATTGATGAACTTCTTACTAAAGATTATTCATGTGATGTAGCTCTGCCGCGTGTCAAAAAGAGATGGACTCTTGAATCTGCTGGTTCATTGCCTCCAAGGAAAAGTGCTTTAGAAGATGACTTTGAGGAGGAGGAAGAAAAGGAGGAGGCTGAGCCAATTAATGATTCTTTAGAAGATGATATTCATGAAAAGAATTATTACCGTGGAAGAAGTCCGGTGCGGGAGAGAGACAGAGACAGAAGGCGTGATAGTCACAGACACAGGGACCGAGATTATGATAGAGACCGAGACTATGACAGAGACTATGATAGAGATCGGGGACGTGGAAGGGAAAGAGATAGAGATCGAGAAAGGGATCGGGATCGAGACAGGGAACGGGACAGAGATAGAGATAGAGATAGAGATAGAGATAGGGATAGGGATAGGGATCGCTATCGCCTAAGGGATGAGAAGGAATATGGTAGAGATCGAGATAGGGAAAGGGAAGGCAGGGAGCGGGAGAGACGAGATAGAGATCGTGGTAGAAGAAGGAGCCATTCAAGGAGCCGAAGTAGGAGTAAAGATCGGGAAGATGGGGAGTACCGGAAGAGACACAGCCGTAGCAGTGTTAGTCCTAGAAGAAGGGACGGGGCGGAGGATAGGGAGGAACCGAAGAAGAAGAAAGAAAAGAAGGAGAAAAAAGAAGGTGGGGCAGGTGAGGAAGATCCGGAGATTGCAGAATGGAATAGGATTCGTGCTTCTCTTGGACTGGCACCTCTCAAGTAGATGGTTTTCTCTTCTTCAGTTTCAATGATATGTGAGTGAATTCTGTTTCATAAAGTATTGAAGTTAAAACTTGTTATCTATTAAAGTTTTGAGTTTGAGCCTTGTGGTTCTGATTTCTGTATAATATTAAATTTGCTGCTATGCTATTCTATTGCAATGTTGAATGATAGTATAAAATCACATTTGGAAATGCCTGCTTGTCCTATCCTATCCTATACTTGGG

Coding sequence (CDS)

ATGGCTAATCGGACAGACCCAGCTGCGAAAAGCATAAGGGGAACGAACCCCCAGAACCTAGTGGAGAAGATTCTTCGCTCCAAGATTTACCAGAACACTTACTGGAAGGAACAATGTTTTGGGTTAACGGCGGAGACATTGGTCGATAAAGCCATGGAGCTCGACCACCTCGGCGGTACATATGGTGGCAACCGCAAGCCCACGCCGTTCATGTGTCTTGTCATGAAGATGCTCCAGATTCAGCCGGAGAAGGAAATCGTGATCGAGTTCATTAAGAATGAAGACTACAAATATGTTCGGGTTCTTGGTGCCTTTTACTTGCGTCTCACTGGGACTGATGTTGATGTATATCGTTACCTGGAACCTTTGTACAACGACTATCGGAAATTGAGGAGAAAATTAGCTGATGGATGTTTTTCTTTATCACACGTGGATGAAGTCATTGATGAACTTCTTACTAAAGATTATTCATGTGATGTAGCTCTGCCGCGTGTCAAAAAGAGATGGACTCTTGAATCTGCTGGTTCATTGCCTCCAAGGAAAAGTGCTTTAGAAGATGACTTTGAGGAGGAGGAAGAAAAGGAGGAGGCTGAGCCAATTAATGATTCTTTAGAAGATGATATTCATGAAAAGAATTATTACCGTGGAAGAAGTCCGGTGCGGGAGAGAGACAGAGACAGAAGGCGTGATAGTCACAGACACAGGGACCGAGATTATGATAGAGACCGAGACTATGACAGAGACTATGATAGAGATCGGGGACGTGGAAGGGAAAGAGATAGAGATCGAGAAAGGGATCGGGATCGAGACAGGGAACGGGACAGAGATAGAGATAGAGATAGAGATAGAGATAGGGATAGGGATAGGGATCGCTATCGCCTAAGGGATGAGAAGGAATATGGTAGAGATCGAGATAGGGAAAGGGAAGGCAGGGAGCGGGAGAGACGAGATAGAGATCGTGGTAGAAGAAGGAGCCATTCAAGGAGCCGAAGTAGGAGTAAAGATCGGGAAGATGGGGAGTACCGGAAGAGACACAGCCGTAGCAGTGTTAGTCCTAGAAGAAGGGACGGGGCGGAGGATAGGGAGGAACCGAAGAAGAAGAAAGAAAAGAAGGAGAAAAAAGAAGGTGGGGCAGGTGAGGAAGATCCGGAGATTGCAGAATGGAATAGGATTCGTGCTTCTCTTGGACTGGCACCTCTCAAGTAG

Protein sequence

MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGTYGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYLEPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDVALPRVKKRWTLESAGSLPPRKSALEDDFEEEEEKEEAEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYDRDRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRYRLRDEKEYGRDRDREREGRERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHSRSSVSPRRRDGAEDREEPKKKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK*

Homology

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BLAST of CsGy2G004610 vs. ExPASy Swiss-Prot
Match: Q8LB54 (Pre-mRNA-splicing factor 38 OS=Arabidopsis thaliana OX=3702 GN=PRP38 PE=1 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 1.0e-128
Identity = 279/406 (68.72%), Postives = 311/406 (76.60%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDP AK+IRGTNPQNLVEKI+R+KIYQ+T+WKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPLAKNIRGTNPQNLVEKIVRTKIYQHTFWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GG+RKPTPF+CL++KMLQIQPEKEIV+EFIKN+DYKYVR+LGAFYLRLTGTDVDVYRYL
Sbjct: 61  FGGSRKPTPFLCLILKMLQIQPEKEIVVEFIKNDDYKYVRILGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDVALPRVKKRWTLESAGSLPPR 180
           EPLYNDYRK+R+KL+DG FSL+HVDEVI+ELLTKDYSCD+A+PR+KKRWTLE  G L PR
Sbjct: 121 EPLYNDYRKVRQKLSDGKFSLTHVDEVIEELLTKDYSCDIAMPRLKKRWTLEQNGLLEPR 180

Query: 181 KSALEDDFEEEEEKEEAEPINDSLEDDIHEKNYYRGRSP--VRERDRDRRRDSHRHRDRD 240
           KS LEDDFEEEEEKEE E I D  ED++ +    R +SP   RERDRDRRRDSHRHRDRD
Sbjct: 181 KSVLEDDFEEEEEKEENEGIADGSEDEMDQ----RRKSPERERERDRDRRRDSHRHRDRD 240

Query: 241 YDRDRDYDRDYDRD--RGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRYRLRD 300
           YDRD D DRD+DRD  R RG  RDRDRERDRD  RERDRDR+R RDR+RDR         
Sbjct: 241 YDRDYDMDRDHDRDYERERGHGRDRDRERDRDHYRERDRDRERGRDRERDR--------- 300

Query: 301 EKEYGRDRDREREGRERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHSRSSVSPRRRD 360
                                RDR RRRS SRSR           RKRH          D
Sbjct: 301 ---------------------RDRARRRSRSRSRD----------RKRH--------ETD 354

Query: 361 GAEDREEPKKKKEKKEK-KEGGAGEEDPEIAEWNRIRASLGLAPLK 402
              DREEPKKKKEKKEK KE G    +PEIAE NR+RASLG+ PL+
Sbjct: 361 DVRDREEPKKKKEKKEKMKEDGTDHPNPEIAEMNRLRASLGMKPLR 354

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BLAST of CsGy2G004610 vs. ExPASy Swiss-Prot
Match: Q7JVL3 (Pre-mRNA-splicing factor 38 OS=Drosophila melanogaster OX=7227 GN=Prp38 PE=1 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 5.8e-68
Identity = 181/338 (53.55%), Postives = 228/338 (67.46%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRT   AK++ GTNPQ L+EKI+RS+IY + YWKEQCF LTAE LVDKAMEL  +GG 
Sbjct: 1   MANRTVKEAKNVHGTNPQYLIEKIIRSRIYDSKYWKEQCFALTAELLVDKAMELRFVGGV 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGN KPT F+CL +KMLQIQPEK+IV+EFIKNE++KYVR LGAFYLRLTG  +D Y+YL
Sbjct: 61  YGGNIKPTQFLCLTLKMLQIQPEKDIVVEFIKNEEFKYVRALGAFYLRLTGAALDCYKYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDVALPRVKKRWTLESAGSLPPR 180
           EPLY D RKLRR+   G F + ++DE IDELL  D  CD+ LPR++KR  LE    + P+
Sbjct: 121 EPLYIDNRKLRRQNRAGQFEIVYMDEYIDELLRNDRVCDIILPRIQKRSILEENNEIEPK 180

Query: 181 KSALEDDFEEE--EEKEEAEPINDSLEDDIHEKNYYRGRSPVRERDRDRRR-----DSHR 240
            S L++D ++E   ++E+A+  N   E+    +   R RS  R R R+R R     +S R
Sbjct: 181 VSVLDEDLDDELPSDEEKADETNRPKENSTAVRRPRRVRSKSRSRSRERERRSGQGNSAR 240

Query: 241 HRD-----RDYDRDRD-------YDRDYDRDRGRGRERDRDRER-DRDRDRERDRDRDRD 300
            RD      DYDR R+       ++ DYDR +  GR  DR+RER DRD  RER+RD DRD
Sbjct: 241 SRDYYDELEDYDRQRNRVRNRDTHNEDYDRRQNNGR-HDRERERQDRDSIRERERDGDRD 300

Query: 301 -RDRDRDRDRDRYRLRDEKEYGRDRDREREGR-ERERR 317
            RDR+R+R+RDR         GR   RER+ R ER+RR
Sbjct: 301 RRDRERERERDR---------GRHDQRERDSRGERDRR 328

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BLAST of CsGy2G004610 vs. ExPASy Swiss-Prot
Match: Q0P5I6 (Pre-mRNA-splicing factor 38A OS=Bos taurus OX=9913 GN=PRPF38A PE=2 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.1e-61
Identity = 159/322 (49.38%), Postives = 210/322 (65.22%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRT   A SI GTNPQ LVEKI+R++IY++ YWKE+CFGLTAE +VDKAMEL  +GG 
Sbjct: 1   MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGN KPTPF+CL +KMLQIQPEK+I++EFIKNED+KYVR+LGA Y+RLTGT +D Y+YL
Sbjct: 61  YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDVALPRVKKRWTLESAGSLPPR 180
           EPLYNDYRK++ +  +G F L HVDE IDELL  +  CD+ LPR++KR+ LE A  L PR
Sbjct: 121 EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPR 180

Query: 181 KSALEDDFEEEEEKEEAEPINDSLE---DDIHEKNYYRGRSPVRERDRDRRRDSHRHRDR 240
            SALE+D ++ E  EE E  ++ LE      H +  Y      R+ D+ RR  + R+R  
Sbjct: 181 VSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSY------RDLDKPRRSPTLRYR-- 240

Query: 241 DYDRDRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRYRLRDE 300
              R R   R     + R     R+R R +   R R R RDR R R R +    +R    
Sbjct: 241 -RSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDR-RHRSRSKSPGHHRSHRH 300

Query: 301 KEYGRDRDREREGRERERRDRD 320
           + + +  +R ++  ++ RR  +
Sbjct: 301 RSHSKSPERSKKSHKKSRRGNE 312

[Close]

BLAST of CsGy2G004610 vs. ExPASy Swiss-Prot
Match: Q8NAV1 (Pre-mRNA-splicing factor 38A OS=Homo sapiens OX=9606 GN=PRPF38A PE=1 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.1e-61
Identity = 159/322 (49.38%), Postives = 210/322 (65.22%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRT   A SI GTNPQ LVEKI+R++IY++ YWKE+CFGLTAE +VDKAMEL  +GG 
Sbjct: 1   MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGN KPTPF+CL +KMLQIQPEK+I++EFIKNED+KYVR+LGA Y+RLTGT +D Y+YL
Sbjct: 61  YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDVALPRVKKRWTLESAGSLPPR 180
           EPLYNDYRK++ +  +G F L HVDE IDELL  +  CD+ LPR++KR+ LE A  L PR
Sbjct: 121 EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPR 180

Query: 181 KSALEDDFEEEEEKEEAEPINDSLE---DDIHEKNYYRGRSPVRERDRDRRRDSHRHRDR 240
            SALE+D ++ E  EE E  ++ LE      H +  Y      R+ D+ RR  + R+R  
Sbjct: 181 VSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSY------RDLDKPRRSPTLRYR-- 240

Query: 241 DYDRDRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRYRLRDE 300
              R R   R     + R     R+R R +   R R R RDR R R R +    +R    
Sbjct: 241 -RSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDR-RHRSRSKSPGHHRSHRH 300

Query: 301 KEYGRDRDREREGRERERRDRD 320
           + + +  +R ++  ++ RR  +
Sbjct: 301 RSHSKSPERSKKSHKKSRRGNE 312

[Close]

BLAST of CsGy2G004610 vs. ExPASy Swiss-Prot
Match: Q8HXH6 (Pre-mRNA-splicing factor 38A OS=Macaca fascicularis OX=9541 GN=PRPF38A PE=2 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.1e-61
Identity = 159/322 (49.38%), Postives = 210/322 (65.22%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRT   A SI GTNPQ LVEKI+R++IY++ YWKE+CFGLTAE +VDKAMEL  +GG 
Sbjct: 1   MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGN KPTPF+CL +KMLQIQPEK+I++EFIKNED+KYVR+LGA Y+RLTGT +D Y+YL
Sbjct: 61  YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDVALPRVKKRWTLESAGSLPPR 180
           EPLYNDYRK++ +  +G F L HVDE IDELL  +  CD+ LPR++KR+ LE A  L PR
Sbjct: 121 EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPR 180

Query: 181 KSALEDDFEEEEEKEEAEPINDSLE---DDIHEKNYYRGRSPVRERDRDRRRDSHRHRDR 240
            SALE+D ++ E  EE E  ++ LE      H +  Y      R+ D+ RR  + R+R  
Sbjct: 181 VSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSY------RDLDKPRRSPTLRYR-- 240

Query: 241 DYDRDRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRYRLRDE 300
              R R   R     + R     R+R R +   R R R RDR R R R +    +R    
Sbjct: 241 -RSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDR-RHRSRSKSPGHHRSHRH 300

Query: 301 KEYGRDRDREREGRERERRDRD 320
           + + +  +R ++  ++ RR  +
Sbjct: 301 RSHSKSPERSKKSHKKSRRGNE 312

[Close]

BLAST of CsGy2G004610 vs. NCBI nr
Match: XP_031737285.1 (pre-mRNA-splicing factor 38 [Cucumis sativus] >KAE8651621.1 hypothetical protein Csa_021262 [Cucumis sativus])

HSP 1 Score: 722 bits (1863), Expect = 4.96e-261
Identity = 401/407 (98.53%), Postives = 401/407 (98.53%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDVALPRVKKRWTLESAGSLPPR 180
           EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDVALPRVKKRWTLESAGSLPPR
Sbjct: 121 EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDVALPRVKKRWTLESAGSLPPR 180

Query: 181 KSALEDDFEEEEEKEEAEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKEEAEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEEAEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240

Query: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDR------YRL 300
           RDRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDR      YRL
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRDRDRDRYRL 300

Query: 301 RDEKEYGRDRDREREGRERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHSRSSVSPRR 360
           RDEKEYGRDRDREREGRERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHSRSSVSPRR
Sbjct: 301 RDEKEYGRDRDREREGRERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHSRSSVSPRR 360

Query: 361 RDGAEDREEPKKKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 401
           RDGAEDREEPKKKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK
Sbjct: 361 RDGAEDREEPKKKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 407

[Close]

BLAST of CsGy2G004610 vs. NCBI nr
Match: XP_038890973.1 (pre-mRNA-splicing factor 38 [Benincasa hispida])

HSP 1 Score: 710 bits (1832), Expect = 2.25e-256
Identity = 392/403 (97.27%), Postives = 399/403 (99.01%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDVALPRVKKRWTLESAGSLPPR 180
           EPLYNDYRKLRRKLADGCF+LSHVDEVIDELLTKDYSCD+ALPRVKKRWTLES+GSLP R
Sbjct: 121 EPLYNDYRKLRRKLADGCFALSHVDEVIDELLTKDYSCDIALPRVKKRWTLESSGSLPAR 180

Query: 181 KSALEDDFEEEEEKEEAEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKEEAEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEEAEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240

Query: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDR--YRLRDEK 300
           RDRDYDRDYDRDRGRGRERDRDRERDRDRDR+RDRDRDRDRDRDRDRDRDR  +RLRDEK
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDRDRDRDRDRDRDRDRDRDRDRDRHRLRDEK 300

Query: 301 EYGRDRDREREGRERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHSRSSVSPRRRDGA 360
           EYGRDRDREREGRERERRDRDRGRRRSHS+SRSRSKDREDGEYRKRHSRSSVSPRRRDGA
Sbjct: 301 EYGRDRDREREGRERERRDRDRGRRRSHSKSRSRSKDREDGEYRKRHSRSSVSPRRRDGA 360

Query: 361 EDREEPKKKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 401
           EDREEP+KKKEKKEKKE GAGEEDPEIAEWNRIRASLGLAPLK
Sbjct: 361 EDREEPRKKKEKKEKKEAGAGEEDPEIAEWNRIRASLGLAPLK 403

[Close]

BLAST of CsGy2G004610 vs. NCBI nr
Match: XP_008453888.1 (PREDICTED: pre-mRNA-splicing factor 38 [Cucumis melo])

HSP 1 Score: 709 bits (1831), Expect = 2.56e-256
Identity = 390/401 (97.26%), Postives = 396/401 (98.75%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDVALPRVKKRWTLESAGSLPPR 180
           EPLYNDYRKLRRKL+DGCFSLSHVDEVIDELLTKDYSCD+ALPRVKKRWTLES+GSLPPR
Sbjct: 121 EPLYNDYRKLRRKLSDGCFSLSHVDEVIDELLTKDYSCDIALPRVKKRWTLESSGSLPPR 180

Query: 181 KSALEDDFEEEEEKEEAEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKEEAEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEEAEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240

Query: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRYRLRDEKEY 300
           RDRDYDRDYDRDRGRGRERDRDRERDRDR+R    DRDRDR+R+RDRDRDRYRLRDEKEY
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRER----DRDRDRERERDRDRDRYRLRDEKEY 300

Query: 301 GRDRDREREGRERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHSRSSVSPRRRDGAED 360
           GRDRDREREGRERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHSRSSVSPRRRDG ED
Sbjct: 301 GRDRDREREGRERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHSRSSVSPRRRDGVED 360

Query: 361 REEPKKKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 401
           REEPKKKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK
Sbjct: 361 REEPKKKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 397

[Close]

BLAST of CsGy2G004610 vs. NCBI nr
Match: KAG6599199.1 (Pre-mRNA-splicing factor 38, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 684 bits (1764), Expect = 5.54e-246
Identity = 381/409 (93.15%), Postives = 389/409 (95.11%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQN YWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDVALPRVKKRWTLESAGSLPPR 180
           EPLYNDYRKLRRKLADGCFSL+HVDEVIDELLTKDYSCD+ALPRVKKRWTLES GSLP R
Sbjct: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180

Query: 181 KSALEDDFEEEEEKEEAEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKE+ EPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDY+
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE 240

Query: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRYRLRDEKEY 300
           RDRD DRDYDRDRGRGRERDRDRERDRDRDR    DRDRDRDRDRDRDRDRY LRDEKEY
Sbjct: 241 RDRDNDRDYDRDRGRGRERDRDRERDRDRDR----DRDRDRDRDRDRDRDRYHLRDEKEY 300

Query: 301 GRDRDREREGRERER--------RDRDRGRRRSHSRSRSRSKDREDGEYRKRHSRSSVSP 360
           GRDRDREREGRERER        RDRDRGRRRSHSRSRSRSKDREDGEYRKRHSRSS+SP
Sbjct: 301 GRDRDREREGRERERERERERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHSRSSISP 360

Query: 361 RRRDGAEDREEPKKKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 401
           RRR+GAEDREEPK+KKEKKEKK  GAGEEDPEIAEWNRIRASLG+APLK
Sbjct: 361 RRRNGAEDREEPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK 405

[Close]

BLAST of CsGy2G004610 vs. NCBI nr
Match: KAG7030134.1 (Pre-mRNA-splicing factor 38 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 683 bits (1763), Expect = 7.31e-246
Identity = 380/407 (93.37%), Postives = 389/407 (95.58%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQN YWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDVALPRVKKRWTLESAGSLPPR 180
           EPLYNDYRKLRRKLADGCFSL+HVDEVIDELLTKDYSCD+ALPRVKKRWTLES GSLP R
Sbjct: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180

Query: 181 KSALEDDFEEEEEKEEAEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKE+ EPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDY+
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE 240

Query: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRYRLRDEKEY 300
           RDRD DRDYDRDRGRGRERDRDRERDRDRDR    DRDRDRDRDRDRDRDRY LRDEKEY
Sbjct: 241 RDRDNDRDYDRDRGRGRERDRDRERDRDRDR----DRDRDRDRDRDRDRDRYHLRDEKEY 300

Query: 301 GRDRDREREGRERER------RDRDRGRRRSHSRSRSRSKDREDGEYRKRHSRSSVSPRR 360
           GRDRDREREGRERER      RDRDRGRRRSHSRSRSRSKDREDGEYRKRH+RSS+SPRR
Sbjct: 301 GRDRDREREGRERERERERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSISPRR 360

Query: 361 RDGAEDREEPKKKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 401
           R+GAEDREEPK+KKEKKEKK  GAGEEDPEIAEWNRIRASLG+APLK
Sbjct: 361 RNGAEDREEPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK 403

[Close]

BLAST of CsGy2G004610 vs. ExPASy TrEMBL
Match: A0A1S3BXB0 (Pre-mRNA-splicing factor 38 OS=Cucumis melo OX=3656 GN=LOC103494470 PE=3 SV=1)

HSP 1 Score: 709 bits (1831), Expect = 1.24e-256
Identity = 390/401 (97.26%), Postives = 396/401 (98.75%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDVALPRVKKRWTLESAGSLPPR 180
           EPLYNDYRKLRRKL+DGCFSLSHVDEVIDELLTKDYSCD+ALPRVKKRWTLES+GSLPPR
Sbjct: 121 EPLYNDYRKLRRKLSDGCFSLSHVDEVIDELLTKDYSCDIALPRVKKRWTLESSGSLPPR 180

Query: 181 KSALEDDFEEEEEKEEAEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKEEAEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEEAEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240

Query: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRYRLRDEKEY 300
           RDRDYDRDYDRDRGRGRERDRDRERDRDR+R    DRDRDR+R+RDRDRDRYRLRDEKEY
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRER----DRDRDRERERDRDRDRYRLRDEKEY 300

Query: 301 GRDRDREREGRERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHSRSSVSPRRRDGAED 360
           GRDRDREREGRERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHSRSSVSPRRRDG ED
Sbjct: 301 GRDRDREREGRERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHSRSSVSPRRRDGVED 360

Query: 361 REEPKKKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 401
           REEPKKKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK
Sbjct: 361 REEPKKKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 397

[Close]

BLAST of CsGy2G004610 vs. ExPASy TrEMBL
Match: A0A6J1FBK8 (Pre-mRNA-splicing factor 38 OS=Cucurbita moschata OX=3662 GN=LOC111443943 PE=3 SV=1)

HSP 1 Score: 682 bits (1761), Expect = 6.38e-246
Identity = 377/402 (93.78%), Postives = 390/402 (97.01%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDVALPRVKKRWTLESAGSLPPR 180
           EPLYNDYRKLRR+LADGCFSL+HVDEVIDELLTKDYSCD+ALPRVKKRW LES GSLP R
Sbjct: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180

Query: 181 KSALEDDFEEEEEKEEAEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKE+ EPIND+LED+IHEKNYYRGRSPVRERD+DRR DSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRHDSHRHRDRDYD 240

Query: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRYRLRDEKEY 300
           RDRDYDRDYDRDRGRGRERDRDR+RDRDRDR  DRDRDR RDRDRDRDRDRYRLRD+KEY
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRDRDRDRDRDR--DRDRDRGRDRDRDRDRDRYRLRDDKEY 300

Query: 301 GRDRDREREGRERERRDRDR-GRRRSHSRSRSRSKDREDGEYRKRHSRSSVSPRRRDGAE 360
            RDRDREREGRERERRDRD  GRRRSHSRSRSRSKDREDGEYRKRH+RSS SPRRRDGAE
Sbjct: 301 SRDRDREREGRERERRDRDHHGRRRSHSRSRSRSKDREDGEYRKRHARSSASPRRRDGAE 360

Query: 361 DREEPKKKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 401
           DR+EPK+KKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK
Sbjct: 361 DRDEPKRKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 400

[Close]

BLAST of CsGy2G004610 vs. ExPASy TrEMBL
Match: A0A6J1G4M6 (Pre-mRNA-splicing factor 38 OS=Cucurbita moschata OX=3662 GN=LOC111450740 PE=3 SV=1)

HSP 1 Score: 681 bits (1757), Expect = 2.50e-245
Identity = 378/405 (93.33%), Postives = 387/405 (95.56%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQN YWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNNYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDVALPRVKKRWTLESAGSLPPR 180
           EPLYNDYRKLRRKLADGCFSL+HVDEVIDELLTKDYSCD+ALPRVKKRWTLES GSLP R
Sbjct: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWTLESTGSLPAR 180

Query: 181 KSALEDDFEEEEEKEEAEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKE+ EPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDY+
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYE 240

Query: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRYRLRDEKEY 300
           RDRD DRDYDRDRGRGRERDRDRERDRDRD      RDRDRDRDRDRDRDRY LRDEKEY
Sbjct: 241 RDRDNDRDYDRDRGRGRERDRDRERDRDRD------RDRDRDRDRDRDRDRYHLRDEKEY 300

Query: 301 GRDRDREREGRERER----RDRDRGRRRSHSRSRSRSKDREDGEYRKRHSRSSVSPRRRD 360
           GRDRDREREGRERER    RDRDRGRRRSHSRSRSRSKDREDGEYRKRH+RSS+SPRRR+
Sbjct: 301 GRDRDREREGRERERERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHTRSSISPRRRN 360

Query: 361 GAEDREEPKKKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 401
           GAEDREEPK+KKEKKEKK  GAGEEDPEIAEWNRIRASLG+APLK
Sbjct: 361 GAEDREEPKRKKEKKEKKGDGAGEEDPEIAEWNRIRASLGMAPLK 399

[Close]

BLAST of CsGy2G004610 vs. ExPASy TrEMBL
Match: A0A6J1HPQ9 (Pre-mRNA-splicing factor 38 OS=Cucurbita maxima OX=3661 GN=LOC111465574 PE=3 SV=1)

HSP 1 Score: 672 bits (1735), Expect = 5.02e-242
Identity = 371/402 (92.29%), Postives = 385/402 (95.77%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  HGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDVALPRVKKRWTLESAGSLPPR 180
           EPLYNDYRKLRR+LADGCFSL+HVDEVIDELLTKDYSCD+ALPRVKKRW LES GSLP R
Sbjct: 121 EPLYNDYRKLRRQLADGCFSLTHVDEVIDELLTKDYSCDIALPRVKKRWNLESTGSLPAR 180

Query: 181 KSALEDDFEEEEEKEEAEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKE+ EPIND+LED+IHEKNYYRGRSPVRERD+DRRRDSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEDVEPINDALEDEIHEKNYYRGRSPVRERDKDRRRDSHRHRDRDYD 240

Query: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRYRLRDEKEY 300
           RDRDYDRDYDRDRGRGRERDRDR+RDRDRD      RDRDR RDRDRDRDRYRLRD+KEY
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRDRDRDRDRD------RDRDRGRDRDRDRDRYRLRDDKEY 300

Query: 301 GRDRDREREGRERERRDRDR-GRRRSHSRSRSRSKDREDGEYRKRHSRSSVSPRRRDGAE 360
            RDRD EREGRERERRDRD  GRRRSHSR+RSRSKDREDGEYRKRH+R S SPRRRDGAE
Sbjct: 301 SRDRDGEREGRERERRDRDHHGRRRSHSRNRSRSKDREDGEYRKRHARCSASPRRRDGAE 360

Query: 361 DREEPKKKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 401
           DR+EPK+KKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK
Sbjct: 361 DRDEPKRKKEKKEKKEGGAGEEDPEIAEWNRIRASLGLAPLK 396

[Close]

BLAST of CsGy2G004610 vs. ExPASy TrEMBL
Match: A0A6J1DS16 (Pre-mRNA-splicing factor 38 OS=Momordica charantia OX=3673 GN=LOC111023319 PE=3 SV=1)

HSP 1 Score: 659 bits (1699), Expect = 3.32e-236
Identity = 376/418 (89.95%), Postives = 391/418 (93.54%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL
Sbjct: 61  FGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDVALPRVKKRWTLESAGSLPPR 180
           EPLYNDYRKLRRKLADGCFSL+HVDEVIDELLTKDYSCD+A+PRVKKRWTLES G LP R
Sbjct: 121 EPLYNDYRKLRRKLADGCFSLTHVDEVIDELLTKDYSCDIAMPRVKKRWTLESTGLLPAR 180

Query: 181 KSALEDDFEEEEEKEEAEPINDSLEDDIHEKNYYRGRSPVRERDRDRRRDSHRHRDRDYD 240
           KSALEDDFEEEEEKE+AE +ND LED+IHEKN+YRGRSP RERDRDRRRDSHRHRDRDYD
Sbjct: 181 KSALEDDFEEEEEKEDAEALND-LEDEIHEKNHYRGRSPGRERDRDRRRDSHRHRDRDYD 240

Query: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDR--------- 300
           RDRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDR         
Sbjct: 241 RDRDYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRERDRDRDRD 300

Query: 301 -YRLRDEKEYGRDRDREREGRERERRDRDR--GRRRSHSRSRSRSKDREDGEYRKRHSRS 360
            YRLRDEKEYGRDR+REREGRER+RRDRDR  GRRRSHSRSRSRSKDREDGE+RKRH+RS
Sbjct: 301 RYRLRDEKEYGRDREREREGRERDRRDRDRDRGRRRSHSRSRSRSKDREDGEHRKRHARS 360

Query: 361 SVSPRRRDGAEDREEPKKKKEKKEK----KEGGAG-EEDPEIAEWNRIRASLGLAPLK 401
           S SPRRRDGAED +EPK+KKEKKEK    KE GAG  EDPEIAEWNRIRASLG+APLK
Sbjct: 361 SASPRRRDGAEDIDEPKRKKEKKEKEKEKKENGAGVAEDPEIAEWNRIRASLGMAPLK 417

[Close]

BLAST of CsGy2G004610 vs. TAIR 10
Match: AT2G40650.1 (PRP38 family protein )

HSP 1 Score: 461.5 bits (1186), Expect = 7.1e-130
Identity = 279/406 (68.72%), Postives = 311/406 (76.60%), Query Frame = 0


Query: 1   MANRTDPAAKSIRGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT 60
           MANRTDP AK+IRGTNPQNLVEKI+R+KIYQ+T+WKEQCFGLTAETLVDKAMELDHLGGT
Sbjct: 1   MANRTDPLAKNIRGTNPQNLVEKIVRTKIYQHTFWKEQCFGLTAETLVDKAMELDHLGGT 60

Query: 61  YGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYL 120
           +GG+RKPTPF+CL++KMLQIQPEKEIV+EFIKN+DYKYVR+LGAFYLRLTGTDVDVYRYL
Sbjct: 61  FGGSRKPTPFLCLILKMLQIQPEKEIVVEFIKNDDYKYVRILGAFYLRLTGTDVDVYRYL 120

Query: 121 EPLYNDYRKLRRKLADGCFSLSHVDEVIDELLTKDYSCDVALPRVKKRWTLESAGSLPPR 180
           EPLYNDYRK+R+KL+DG FSL+HVDEVI+ELLTKDYSCD+A+PR+KKRWTLE  G L PR
Sbjct: 121 EPLYNDYRKVRQKLSDGKFSLTHVDEVIEELLTKDYSCDIAMPRLKKRWTLEQNGLLEPR 180

Query: 181 KSALEDDFEEEEEKEEAEPINDSLEDDIHEKNYYRGRSP--VRERDRDRRRDSHRHRDRD 240
           KS LEDDFEEEEEKEE E I D  ED++ +    R +SP   RERDRDRRRDSHRHRDRD
Sbjct: 181 KSVLEDDFEEEEEKEENEGIADGSEDEMDQ----RRKSPERERERDRDRRRDSHRHRDRD 240

Query: 241 YDRDRDYDRDYDRD--RGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRYRLRD 300
           YDRD D DRD+DRD  R RG  RDRDRERDRD  RERDRDR+R RDR+RDR         
Sbjct: 241 YDRDYDMDRDHDRDYERERGHGRDRDRERDRDHYRERDRDRERGRDRERDR--------- 300

Query: 301 EKEYGRDRDREREGRERERRDRDRGRRRSHSRSRSRSKDREDGEYRKRHSRSSVSPRRRD 360
                                RDR RRRS SRSR           RKRH          D
Sbjct: 301 ---------------------RDRARRRSRSRSRD----------RKRH--------ETD 354

Query: 361 GAEDREEPKKKKEKKEK-KEGGAGEEDPEIAEWNRIRASLGLAPLK 402
              DREEPKKKKEKKEK KE G    +PEIAE NR+RASLG+ PL+
Sbjct: 361 DVRDREEPKKKKEKKEKMKEDGTDHPNPEIAEMNRLRASLGMKPLR 354

[Close]

BLAST of CsGy2G004610 vs. TAIR 10
Match: AT5G37370.1 (PRP38 family protein )

HSP 1 Score: 45.4 bits (106), Expect = 1.2e-04
Identity = 100/336 (29.76%), Postives = 158/336 (47.02%), Query Frame = 0


Query: 18  QNLVEKILRSKIYQNTYWKEQCFGL-TAETLVDKAM-ELDHLGGTYGGN-RKPTPFMCLV 77
           ++L+EK+L   I  + Y+KE  +GL T   ++D+   +++H+    GGN R P+   CL+
Sbjct: 12  ESLLEKVLSMNILSSDYFKE-LYGLKTYHEVIDEIYNQVNHVEPWMGGNCRGPSTAYCLL 71

Query: 78  MKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYLEPLYNDYRKLRRKL 137
            K   ++   + +   +K+ D  Y+R +G  YLR       ++ + EP   D  +     
Sbjct: 72  YKFFTMKLTVKQMHGLLKHTDSPYIRAVGFLYLRYVADAKTLWTWYEPYIKDDEEFSPG- 131

Query: 138 ADGCFSLSHVDEVIDELLTKDYSCDVALPRVKKRWTLESAG-----SLPPRKSALEDDFE 197
           ++G   ++ +   + +LL   Y  D   PR+      +        +LP + S    D  
Sbjct: 132 SNG--RMTTMGVYVRDLLLGLYYFDTLFPRIPVPVMRQIVSNLEKMNLPTKPSGSTGDMT 191

Query: 198 EEEEKEEAEP--INDSLEDDIHEKNYY----RGRSPVRERDRDRRRDSHRHRDRDYDRDR 257
              E     P  +  SL     ++  +    RG SPVR           R     YDR+ 
Sbjct: 192 RGSEDTARRPPSVKASLSVSFGQRAPHRASTRGSSPVR-----------RPPPTGYDRNG 251

Query: 258 DYDRDYDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRYRLRDEKEYGRD 317
                 D  + R   R + R+   DRD +R R+R+R++DR+R+R RDRYR R E++YG D
Sbjct: 252 G-----DEVQQRSPRRSQSRDYYSDRDSDRQREREREKDRERERGRDRYRER-ERDYGND 311

Query: 318 RDREREGRERERR-----DRDRGRRRSHSRSRSRSK 335
           R   R+   R RR     DR R  RRS SRSRSRS+
Sbjct: 312 RRSRRDYDSRSRRNDYEDDRSRHDRRSRSRSRSRSR 326

[Close]

BLAST of CsGy2G004610 vs. TAIR 10
Match: AT5G37370.2 (PRP38 family protein )

HSP 1 Score: 44.7 bits (104), Expect = 2.1e-04
Identity = 98/331 (29.61%), Postives = 157/331 (47.43%), Query Frame = 0


Query: 18  QNLVEKILRSKIYQNTYWKEQCFGL-TAETLVDKAM-ELDHLGGTYGGN-RKPTPFMCLV 77
           ++L+EK+L   I  + Y+KE  +GL T   ++D+   +++H+    GGN R P+   CL+
Sbjct: 12  ESLLEKVLSMNILSSDYFKE-LYGLKTYHEVIDEIYNQVNHVEPWMGGNCRGPSTAYCLL 71

Query: 78  MKMLQIQPEKEIVIEFIKNEDYKYVRVLGAFYLRLTGTDVDVYRYLEPLYNDYRKLRRKL 137
            K   ++   + +   +K+ D  Y+R +G  YLR       ++ + EP   D  +     
Sbjct: 72  YKFFTMKLTVKQMHGLLKHTDSPYIRAVGFLYLRYVADAKTLWTWYEPYIKDDEEFSPG- 131

Query: 138 ADGCFSLSHVDEVIDELLTKDYSCDVALPRVKKRWTLESAGSLPPRKSALEDDFEEEEEK 197
           ++G  +   V    D L  +     + +P +++  +     +LP + S    D     E 
Sbjct: 132 SNGRMTTMGVYYYFDTLFPR-----IPVPVMRQIVSNLEKMNLPTKPSGSTGDMTRGSED 191

Query: 198 EEAEP--INDSLEDDIHEKNYY----RGRSPVRERDRDRRRDSHRHRDRDYDRDRDYDRD 257
               P  +  SL     ++  +    RG SPVR           R     YDR+      
Sbjct: 192 TARRPPSVKASLSVSFGQRAPHRASTRGSSPVR-----------RPPPTGYDRNGG---- 251

Query: 258 YDRDRGRGRERDRDRERDRDRDRERDRDRDRDRDRDRDRDRDRYRLRDEKEYGRDRDRER 317
            D  + R   R + R+   DRD +R R+R+R++DR+R+R RDRYR R E++YG DR   R
Sbjct: 252 -DEVQQRSPRRSQSRDYYSDRDSDRQREREREKDRERERGRDRYRER-ERDYGNDRRSRR 311

Query: 318 EGRERERR-----DRDRGRRRSHSRSRSRSK 335
           +   R RR     DR R  RRS SRSRSRS+
Sbjct: 312 DYDSRSRRNDYEDDRSRHDRRSRSRSRSRSR 318

The following BLAST results are available for this feature:

BLAST of CsGy2G004610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LB54	1.0e-128	68.72	Pre-mRNA-splicing factor 38 OS=Arabidopsis thaliana OX=3702 GN=PRP38 PE=1 SV=1	[more]
Q7JVL3	5.8e-68	53.55	Pre-mRNA-splicing factor 38 OS=Drosophila melanogaster OX=7227 GN=Prp38 PE=1 SV=...	[more]
Q0P5I6	1.1e-61	49.38	Pre-mRNA-splicing factor 38A OS=Bos taurus OX=9913 GN=PRPF38A PE=2 SV=1	[more]
Q8NAV1	1.1e-61	49.38	Pre-mRNA-splicing factor 38A OS=Homo sapiens OX=9606 GN=PRPF38A PE=1 SV=1	[more]
Q8HXH6	1.1e-61	49.38	Pre-mRNA-splicing factor 38A OS=Macaca fascicularis OX=9541 GN=PRPF38A PE=2 SV=1	[more]

BLAST of CsGy2G004610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031737285.1	4.96e-261	98.53	pre-mRNA-splicing factor 38 [Cucumis sativus] >KAE8651621.1 hypothetical protein...	[more]
XP_038890973.1	2.25e-256	97.27	pre-mRNA-splicing factor 38 [Benincasa hispida]	[more]
XP_008453888.1	2.56e-256	97.26	PREDICTED: pre-mRNA-splicing factor 38 [Cucumis melo]	[more]
KAG6599199.1	5.54e-246	93.15	Pre-mRNA-splicing factor 38, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7030134.1	7.31e-246	93.37	Pre-mRNA-splicing factor 38 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CsGy2G004610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BXB0	1.24e-256	97.26	Pre-mRNA-splicing factor 38 OS=Cucumis melo OX=3656 GN=LOC103494470 PE=3 SV=1	[more]
A0A6J1FBK8	6.38e-246	93.78	Pre-mRNA-splicing factor 38 OS=Cucurbita moschata OX=3662 GN=LOC111443943 PE=3 S...	[more]
A0A6J1G4M6	2.50e-245	93.33	Pre-mRNA-splicing factor 38 OS=Cucurbita moschata OX=3662 GN=LOC111450740 PE=3 S...	[more]
A0A6J1HPQ9	5.02e-242	92.29	Pre-mRNA-splicing factor 38 OS=Cucurbita maxima OX=3661 GN=LOC111465574 PE=3 SV=...	[more]
A0A6J1DS16	3.32e-236	89.95	Pre-mRNA-splicing factor 38 OS=Momordica charantia OX=3673 GN=LOC111023319 PE=3 ...	[more]

BLAST of CsGy2G004610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40650.1	7.1e-130	68.72	PRP38 family protein	[more]
AT5G37370.1	1.2e-04	29.76	PRP38 family protein	[more]
AT5G37370.2	2.1e-04	29.61	PRP38 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Gy14) v2.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005037	Pre-mRNA-splicing factor 38	PFAM	PF03371	PRP38	coord: 10..173 e-value: 8.8E-61 score: 204.8
IPR005037	Pre-mRNA-splicing factor 38	PANTHER	PTHR23142	UNCHARACTERIZED	coord: 1..394
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 299..401
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..287
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 331..388
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..203
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 299..319
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..287
None	No IPR available	PANTHER	PTHR23142:SF1	PRE-MRNA-SPLICING FACTOR 38A	coord: 1..394

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G004610.2	CsGy2G004610.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0071011	precatalytic spliceosome